RPSBLAST alignment of GI: 254780312 and protein with PDBid: 3cfy
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633} Length = 137
Score = 80.1 bits (197), Expect = 1e-16
Identities = 23/118 (19%), Positives = 44/118 (37%)
Query: 1 MNQKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKVREEPFSLLLTDIVMPEMD 60
+ ++LL ED + + + Y++ G A + L++ D+ +P+M
Sbjct: 3 LRPRVLLVEDSTSLAILYKQYVKDEPYDIFHVETGRDAIQFIERSKPQLIILDLKLPDMS 62
Query: 61 GIELARRATELDPDLKVMFITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLL 118
G ++ + D V+ T +V L + L KP + L V L
Sbjct: 63 GEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQKGAEDFLEKPINADRLKTSVALHL 120