RPSBLAST alignment of GI: 254780312 and protein with PDBid: 3eul
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis} Length = 152
Score = 80.3 bits (198), Expect = 9e-17
Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Query: 4 KILLAEDDDDMRRFLIKALGKAGY--EVVSCNNGASAYDKVREEPFSLLLTDIVMPEMDG 61
++++ +D R +++AL +G V ++GA+A + ++ + L D MP MDG
Sbjct: 17 RVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDG 76
Query: 62 IELARRATELDPDLKVMFITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLL 118
++A + +V+ I+ A+ + A L K ++V V
Sbjct: 77 AQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCA 133