RPSBLAST alignment of GI: 254780312 and protein with PDBid: 3hdv

>3hdv_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.09A {Pseudomonas putida KT2440} Length = 136

 Score = 75.7 bits (186), Expect = 2e-15
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 2/118 (1%)

Query: 3   QKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKV-REEPFSLLLTDIVMPEMDG 61
             +L+ +D+   R  LI  L   G + V  +    A   +  ++   L++TD+ M    G
Sbjct: 8   PLVLVVDDNAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQPESG 67

Query: 62  IELARRATELD-PDLKVMFITGFAAVALNPDSNAPKNAKVLSKPFHLRDLVNEVNRLL 118
           ++L R     +   L ++ ++G   V    D         L KP  L  L+  VN+ L
Sbjct: 68  LDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKEL 125