RPSBLAST alignment of GI: 254780312 and protein with PDBid: 3luf
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A* Length = 259
Score = 61.2 bits (148), Expect = 6e-11
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 9/123 (7%)
Query: 2 NQKILLAEDDDDMRRFLIKALGKAGYEVVSCNNGASAYDKV-REEPFSLLLTDIVMPEMD 60
++L+ +D R + L K +V ++ A + + L+L D MPE+D
Sbjct: 124 QIEVLVVDDSRTSRHRTMAQLRKQLLQVHEASHAREALATLEQHPAIRLVLVDYYMPEID 183
Query: 61 GIELAR--RATELDPDLKVMFITGFAAVALNPDSNAPKNAKV---LSKPFHLRDLVNEVN 115
GI L R R L ++ I+ S L++PF +L V+
Sbjct: 184 GISLVRMLRERYSKQQLAIIGISVSDKRG---LSARYLKQGANDFLNQPFEPEELQCRVS 240
Query: 116 RLL 118
L
Sbjct: 241 HNL 243