HHsearch alignment for GI: 254780313 and conserved domain: COG0421
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism].
Probab=97.45 E-value=0.0039 Score=40.11 Aligned_cols=137 Identities=17% Similarity=0.171 Sum_probs=83.3
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCC------CC---------CCCCEEEECCCCHHHHHHHHHHHCC
Q ss_conf 67888504553068999997068788327864112133------34---------6981783011220799999997313
Q gi|254780313|r 69 RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM------EP---------ILGVKFFKFDFLDLDSWEFIRQAIG 133 (227)
Q Consensus 69 ~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~~------~~---------i~gv~~~~gDi~~~~~~~~i~~~l~ 133 (227)
T Consensus 78 k~VLiiGgGdG~tlRevlkh~~v----e~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~D-----g~~~v~~~~- 147 (282)
T COG0421 78 KRVLIIGGGDGGTLREVLKHLPV----ERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDD-----GVEFLRDCE- 147 (282)
T ss_pred CEEEEECCCCCHHHHHHHHCCCC----CEEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEECC-----HHHHHHHCC-
T ss_conf 76999889766999999836884----33799970889999999866675433579736899610-----799987488-
Q ss_pred CCCCEEEECCCHHHCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE---E-ECCCCHHHHHHHHHHHCCEEEEE-C
Q ss_conf 887489753202110222-1015788989998898764114877469999---3-05999899999998625846997-6
Q gi|254780313|r 134 GNPDLVLSDMAYPTIGHR-KIDHLRTMSLCEAATFFALEMLNIGGDFLVK---T-FQGGTTNDILCLLKKHFQKVIHV-K 207 (227)
Q Consensus 134 ~~~DlVlSDmapn~SG~~-~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K---~-F~G~~~~~l~~~l~~~F~~V~~~-K 207 (227)
T Consensus 148 ~~fDvIi~D~tdp~-gp~~~Lft~-------eFy~~~~~~L~~~Gi~v~q~~~~~~~~~~~~~~~~~~~~vf~~~~~~~~ 219 (282)
T COG0421 148 EKFDVIIVDSTDPV-GPAEALFTE-------EFYEGCRRALKEDGIFVAQAGSPFLQDEEIALAYRNVSRVFSIVPPYVA 219 (282)
T ss_pred CCCCEEEECCCCCC-CCCCCCCCH-------HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 76778998588998-843023779-------9999999862889689994478432407899999877753435655210
Q ss_pred CCCCCCCCCEEEEEEC
Q ss_conf 8665755824989830
Q gi|254780313|r 208 PVASRAESVEMFLLAK 223 (227)
Q Consensus 208 P~aSR~~S~E~Ylv~~ 223 (227)
T Consensus 220 ~ipt~~~g~~~f~~~s 235 (282)
T COG0421 220 PIPTYPSGFWGFIVAS 235 (282)
T ss_pred CCCEECCCCEEEEEEE
T ss_conf 2412227815899961