HHsearch alignment for GI: 254780313 and conserved domain: COG2518

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones].
Probab=94.95  E-value=0.043  Score=33.58  Aligned_cols=96  Identities=24%  Similarity=0.303  Sum_probs=65.5

Q ss_pred             HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC-----------CCCCCCCEEEECCCCHH
Q ss_conf             9999986458313796788850455306899999706878832786411213-----------33469817830112207
Q gi|254780313|r   54 KLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD-----------MEPILGVKFFKFDFLDL  122 (227)
Q Consensus        54 KL~eId~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~-----------~~~i~gv~~~~gDi~~~  122 (227)
T Consensus        63 ~m~~~----L~~~~g~~VLEIGtGsGY~aAvla~l~~------~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G  132 (209)
T COG2518          63 RMLQL----LELKPGDRVLEIGTGSGYQAAVLARLVG------RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKG  132 (209)
T ss_pred             HHHHH----HCCCCCCEEEEECCCCHHHHHHHHHHHC------EEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf             99997----4899998688877783099999999748------4999997199999999999976987349997885568


Q ss_pred             HHHHHHHHHC-CCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             9999999731-3887489753202110222101578898999889876411487746999930
Q gi|254780313|r  123 DSWEFIRQAI-GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF  184 (227)
Q Consensus       123 ~~~~~i~~~l-~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F  184 (227)
T Consensus       133 --------~~~~aPyD~I~Vtaaa~~v-----P------------~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         133 --------WPEEAPYDRIIVTAAAPEV-----P------------EALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             --------CCCCCCCCEEEEEECCCCC-----C------------HHHHHHCCCCCEEEEEEC
T ss_conf             --------8777984789995035779-----9------------899985065988999985