HHsearch alignment for GI: 254780313 and conserved domain: COG2518
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones].
Probab=94.95 E-value=0.043 Score=33.58 Aligned_cols=96 Identities=24% Similarity=0.303 Sum_probs=65.5
Q ss_pred HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC-----------CCCCCCCEEEECCCCHH
Q ss_conf 9999986458313796788850455306899999706878832786411213-----------33469817830112207
Q gi|254780313|r 54 KLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD-----------MEPILGVKFFKFDFLDL 122 (227)
Q Consensus 54 KL~eId~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~-----------~~~i~gv~~~~gDi~~~ 122 (227)
T Consensus 63 ~m~~~----L~~~~g~~VLEIGtGsGY~aAvla~l~~------~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G 132 (209)
T COG2518 63 RMLQL----LELKPGDRVLEIGTGSGYQAAVLARLVG------RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKG 132 (209)
T ss_pred HHHHH----HCCCCCCEEEEECCCCHHHHHHHHHHHC------EEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCCCCC
T ss_conf 99997----4899998688877783099999999748------4999997199999999999976987349997885568
Q ss_pred HHHHHHHHHC-CCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf 9999999731-3887489753202110222101578898999889876411487746999930
Q gi|254780313|r 123 DSWEFIRQAI-GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184 (227)
Q Consensus 123 ~~~~~i~~~l-~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F 184 (227)
T Consensus 133 --------~~~~aPyD~I~Vtaaa~~v-----P------------~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 133 --------WPEEAPYDRIIVTAAAPEV-----P------------EALLDQLKPGGRLVIPVG 170 (209)
T ss_pred --------CCCCCCCCEEEEEECCCCC-----C------------HHHHHHCCCCCEEEEEEC
T ss_conf --------8777984789995035779-----9------------899985065988999985