HHsearch alignment for GI: 254780313 and conserved domain: COG2890
>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis].
Probab=97.66 E-value=0.00057 Score=45.32 Aligned_cols=129 Identities=22% Similarity=0.262 Sum_probs=77.0
Q ss_pred EEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCC---------C--CCCCCEEEECCCCHHHHHHHHHHHCCCCCCE
Q ss_conf 7888504553068999997068788327864112133---------3--4698178301122079999999731388748
Q gi|254780313|r 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM---------E--PILGVKFFKFDFLDLDSWEFIRQAIGGNPDL 138 (227)
Q Consensus 70 ~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~~---------~--~i~gv~~~~gDi~~~~~~~~i~~~l~~~~Dl 138 (227)
T Consensus 113 ~ilDlGTGSG~iai~la~~~~----~~~V~a~Dis~~Al~~A~~Na~~~~l~~~~~~~~dlf~~---------~~~~fDl 179 (280)
T COG2890 113 RILDLGTGSGAIAIALAKEGP----DAEVIAVDISPDALALARENAERNGLVRVLVVQSDLFEP---------LRGKFDL 179 (280)
T ss_pred CEEEECCCCCHHHHHHHHHCC----CCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCHHHC---------CCCCCCE
T ss_conf 189965883199999996189----887999989999999999999982897479874003334---------6888577
Q ss_pred EEECCCHHHCCC------CCCHH---------HHHHHHHHHHHHHHHHCCCCCCEEEEEEE--CCCCHHHHHHHHHHHCC
Q ss_conf 975320211022------21015---------78898999889876411487746999930--59998999999986258
Q gi|254780313|r 139 VLSDMAYPTIGH------RKIDH---------LRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKKHFQ 201 (227)
Q Consensus 139 VlSDmapn~SG~------~~~D~---------~~~~~L~~~al~~A~~~Lk~gG~fV~K~F--~G~~~~~l~~~l~~~F~ 201 (227)
T Consensus 180 IVsNP-PYip~~~~~~~~~~~~~EP~~Al~~g~dGl~~~~~i~~~a~~~l~~~g~l~le~g~~q~~~v~~~~~~~~~-~~ 257 (280)
T COG2890 180 IVSNP-PYIPAEDPELLPEVVRYEPLLALVGGGDGLEVYRRILGEAPDILKPGGVLILEIGLTQGEAVKALFEDTGF-FE 257 (280)
T ss_pred EEECC-CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCC-CE
T ss_conf 99689-98888521137421358979987248777899999999899872868289999769848999999997498-44
Q ss_pred EEEEECCCCCCC
Q ss_conf 469976866575
Q gi|254780313|r 202 KVIHVKPVASRA 213 (227)
Q Consensus 202 ~V~~~KP~aSR~ 213 (227)
T Consensus 258 ~v~~~~d~~g~~ 269 (280)
T COG2890 258 IVETLKDLFGRD 269 (280)
T ss_pred EEEEEECCCCCE
T ss_conf 766551456763