HHsearch alignment for GI: 254780313 and conserved domain: COG4976
>COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only].
Probab=96.60 E-value=0.0029 Score=40.90 Aligned_cols=121 Identities=20% Similarity=0.149 Sum_probs=70.9
Q ss_pred HHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC-CCCCCCCEEEECCCCHH
Q ss_conf 81844799999999986458313796788850455306899999706878832786411213-33469817830112207
Q gi|254780313|r 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD-MEPILGVKFFKFDFLDL 122 (227)
Q Consensus 44 ~~gyrsRaafKL~eId~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~-~~~i~gv~~~~gDi~~~ 122 (227)
T Consensus 105 kL~Y~--vP~~l~emI~~~~~-g~F~~~lDLGCGTGL~G~~lR~~a~------~ltGvDiS~nMl~kA~e----Kg~YD~ 171 (287)
T COG4976 105 KLGYS--VPELLAEMIGKADL-GPFRRMLDLGCGTGLTGEALRDMAD------RLTGVDISENMLAKAHE----KGLYDT 171 (287)
T ss_pred HHCCC--CHHHHHHHHHHCCC-CCCCEEEECCCCCCCCCHHHHHHHH------HCCCCCHHHHHHHHHHH----CCCHHH
T ss_conf 73576--18999999975157-7620234426676766276788886------51277626999999886----241578
Q ss_pred HHHHHHHHH----CCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf 999999973----138874897532021102221015788989998898764114877469999305999
Q gi|254780313|r 123 DSWEFIRQA----IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188 (227)
Q Consensus 123 ~~~~~i~~~----l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F~G~~ 188 (227)
T Consensus 172 L~~Aea~~Fl~~~~~er~DLi~Aa-----------DVl~YlG~Le~~~~~aa~~L~~gGlfaFSvE~l~~ 230 (287)
T COG4976 172 LYVAEAVLFLEDLTQERFDLIVAA-----------DVLPYLGALEGLFAGAAGLLAPGGLFAFSVETLPD 230 (287)
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHH-----------HHHHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCC
T ss_conf 889899987552267764301245-----------67886400346899999855898648987231677