HHsearch alignment for GI: 254780313 and conserved domain: KOG0820
>KOG0820 consensus.
Probab=96.01 E-value=0.01 Score=37.42 Aligned_cols=110 Identities=21% Similarity=0.302 Sum_probs=70.9
Q ss_pred CCCHHHHHH--HH-CCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEE
Q ss_conf 400799999--64-089999999881844799999999986458313796788850455306899999706878832786
Q gi|254780313|r 23 QGSSRDWLN--RH-INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVV 99 (227)
Q Consensus 23 ~~ss~~W~~--r~-~~D~y~~~Ak~~gyrsRaafKL~eId~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~Vi 99 (227)
T Consensus 13 ~~ss~~~~~~~~~~~~~~kfnkd~GQHilkN-p~v~~~I~~ka~~-k~tD~VLEvGPGTGnLT~~lLe~------~kkVv 84 (315)
T KOG0820 13 RKSSRAWPEFRNPNSGGSKFNKDFGQHILKN-PLVIDQIVEKADL-KPTDVVLEVGPGTGNLTVKLLEA------GKKVV 84 (315)
T ss_pred CCCCCCCHHHCCCCCCCCCCCCCCCHHHHCC-HHHHHHHHHCCCC-CCCCEEEEECCCCCHHHHHHHHH------CCEEE
T ss_conf 5577555011065545766554301455547-7889999860478-99877999579877899999972------08489
Q ss_pred EECCCC-C-CC----CCC------CEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHHCC
Q ss_conf 411213-3-34----698------17830112207999999973138874897532021102
Q gi|254780313|r 100 AIDILD-M-EP----ILG------VKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149 (227)
Q Consensus 100 gVDl~~-~-~~----i~g------v~~~~gDi~~~~~~~~i~~~l~~~~DlVlSDmapn~SG 149 (227)
T Consensus 85 A~E~Dprmvael~krv~gtp~~~kLqV~~gD~lK~d~---------P~fd~cVsNlPyqISS 137 (315)
T KOG0820 85 AVEIDPRMVAELEKRVQGTPKSGKLQVLHGDFLKTDL---------PRFDGCVSNLPYQISS 137 (315)
T ss_pred EEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC---------CCCCEEECCCCCCCCC
T ss_conf 9940807899999986699865604688503125788---------5103112269853367