HHsearch alignment for GI: 254780313 and conserved domain: KOG2940
>KOG2940 consensus.
Probab=95.65 E-value=0.012 Score=37.02 Aligned_cols=136 Identities=21% Similarity=0.349 Sum_probs=78.7
Q ss_pred HHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC-C
Q ss_conf 999964089999999881844799999999986458313796788850455306899999706878832786411213-3
Q gi|254780313|r 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD-M 106 (227)
Q Consensus 28 ~W~~r~~~D~y~~~Ak~~gyrsRaafKL~eId~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~-~ 106 (227)
T Consensus 44 a~~~d~k~d-ylkeeig~r----l------aDrvfD~kk~fp~a~diGcs~G~v~r---hl~~e~--vekli~~DtS~~M 107 (325)
T KOG2940 44 AWLSDQKND-YLKEEIGDR----L------ADRVFDCKKSFPTAFDIGCSLGAVKR---HLRGEG--VEKLIMMDTSYDM 107 (325)
T ss_pred HHCCHHHHH-HHHHHHHHH----H------HHHHHHHHHHCCCEEECCCCHHHHHH---HHHHCC--HHHEEEEECCHHH
T ss_conf 635100016-899998888----8------89998776607520440655446568---877525--1340664041679
Q ss_pred ----C--CCCCCE--EEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
Q ss_conf ----3--469817--83011220799999997313887489753202110222101578898999889876411487746
Q gi|254780313|r 107 ----E--PILGVK--FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178 (227)
Q Consensus 107 ----~--~i~gv~--~~~gDi~~~~~~~~i~~~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~ 178 (227)
T Consensus 108 ~~s~~~~qdp~i~~~~~v~D---EE~Ld----f~ens~DLiisSlsl----HW~NdLPg~m~~c-------k~~lKPDg~ 169 (325)
T KOG2940 108 IKSCRDAQDPSIETSYFVGD---EEFLD----FKENSVDLIISSLSL----HWTNDLPGSMIQC-------KLALKPDGL 169 (325)
T ss_pred HHHHHCCCCCCEEEEEEECC---HHCCC----CCCCCHHHHHHHHHH----HHHCCCCHHHHHH-------HHHCCCCCC
T ss_conf 99753268985379997255---10156----553501112654334----5640483689998-------874289751
Q ss_pred EEEEEECCCCHHHHHHHHH
Q ss_conf 9999305999899999998
Q gi|254780313|r 179 FLVKTFQGGTTNDILCLLK 197 (227)
Q Consensus 179 fV~K~F~G~~~~~l~~~l~ 197 (227)
T Consensus 170 FiasmlggdTLyELR~slq 188 (325)
T KOG2940 170 FIASMLGGDTLYELRCSLQ 188 (325)
T ss_pred CHHHHHCCCCHHHHHHHHH
T ss_conf 2167756440999998763