HHsearch alignment for GI: 254780313 and conserved domain: PRK11088

Probab=97.58  E-value=0.00043  Score=46.08  Aligned_cols=108  Identities=17%  Similarity=0.198  Sum_probs=70.2

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC------CCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEE
Q ss_conf             796788850455306899999706878832786411213------33469817830112207999999973138874897
Q gi|254780313|r   67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD------MEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL  140 (227)
Q Consensus        67 ~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~------~~~i~gv~~~~gDi~~~~~~~~i~~~l~~~~DlVl  140 (227)
T Consensus        85 ~~~~ilD~GCGEGyYl~~l~~~l~~~-~~~~~~G~DiSK~ai~~Aak~~~~~~~~Va~~~~lP-------~~d~s~D~vl  156 (272)
T PRK11088         85 KATAILDIGCGEGYYTHALADALPEV-TTCQLFGLDISKVAIKYAAKRYPQVTFCVASSHRLP-------FADQSLDAII  156 (272)
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCC-CCCCEEEEECCHHHHHHHHCCCCCCEEEEEECCCCC-------CCCCCCEEEE
T ss_conf             78648881587778999999974115-787379981179999999626888549996100188-------8766540899


Q ss_pred             ECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC-HHHHHHHHHHHCCEEE
Q ss_conf             532021102221015788989998898764114877469999305999-8999999986258469
Q gi|254780313|r  141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT-TNDILCLLKKHFQKVI  204 (227)
Q Consensus       141 SDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F~G~~-~~~l~~~l~~~F~~V~  204 (227)
T Consensus       157 ~vFsP~~~-----~-------------Ef~RvLkp~G~li~V~-P~~~HL~eLre~l---Y~~~~  199 (272)
T PRK11088        157 RIYAPCKA-----E-------------ELARVVKPGGIVITVT-PGPRHLFELKGLI---YDEVR  199 (272)
T ss_pred             EEECCCCH-----H-------------HHHHEECCCCEEEEEE-CCHHHHHHHHHHH---HHCCC
T ss_conf             98437885-----8-------------8612463797899997-8888999999997---51566