HHsearch alignment for GI: 254780313 and conserved domain: PTZ00146

>PTZ00146 fibrillarin; Provisional.
Probab=97.99  E-value=7.6e-05  Score=50.82  Aligned_cols=99  Identities=18%  Similarity=0.314  Sum_probs=74.5

Q ss_pred             CCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC--------C-CCCCCCEEEECCCCHHHHHHHHHHHCCCC
Q ss_conf             13796788850455306899999706878832786411213--------3-34698178301122079999999731388
Q gi|254780313|r   65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD--------M-EPILGVKFFKFDFLDLDSWEFIRQAIGGN  135 (227)
Q Consensus        65 ~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~--------~-~~i~gv~~~~gDi~~~~~~~~i~~~l~~~  135 (227)
T Consensus       133 Ik~GskVLYLGAasGTTVSHVSDIVG~~---G~VYAVEfSpr~~RdLl~lA~~R~NIvPIleDAr~P~kYr~l---V-~~  205 (296)
T PTZ00146        133 IKPGSKVLYLGAASGTTVSHVSDLVGPE---GVVYAVEFSHRSGRDLVEMAKRRTNIVPIIEDARYPQKYRML---V-PM  205 (296)
T ss_pred             CCCCCEEEEECCCCCCCHHHHHHHCCCC---CEEEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH---C-CC
T ss_conf             3799989985146798655666501788---619999706466889999972279833577778974675542---4-55


Q ss_pred             CCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             748975320211022210157889899988987641148774699993
Q gi|254780313|r  136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT  183 (227)
Q Consensus       136 ~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~  183 (227)
T Consensus       206 VDvIf~DVAQ-------pdQarI~------~~Na~~FLK~gG~~~i~I  240 (296)
T PTZ00146        206 VDCIFADVAQ-------PDQARIV------ALNAQHFLKNGGHFVISI  240 (296)
T ss_pred             CCEEEECCCC-------HHHHHHH------HHHHHHHHHCCCEEEEEE
T ss_conf             5589961787-------6589999------999998531698899999