HHsearch alignment for GI: 254780313 and conserved domain: TIGR00080

>TIGR00080 pimt protein-L-isoaspartate O-methyltransferase; InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase () (PCMT) (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyzes the transfer of a methyl group from S- adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerization of normal L-aspartyl and L- asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process.
Probab=96.07  E-value=0.039  Score=33.83  Aligned_cols=96  Identities=21%  Similarity=0.217  Sum_probs=60.2

Q ss_pred             CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC---------C-------CCCCCCEEEECCCCHHHHHH
Q ss_conf             8313796788850455306899999706878832786411213---------3-------34698178301122079999
Q gi|254780313|r   63 QILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD---------M-------EPILGVKFFKFDFLDLDSWE  126 (227)
Q Consensus        63 ~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~---------~-------~~i~gv~~~~gDi~~~~~~~  126 (227)
T Consensus        78 nhL~~~~~vLeiG~GSGY~aavlA~~v~~---~G~V~SiEri~~L~~~A~~~Lk~hhseqL~~~NV~v~~GDG~~G-~~~  153 (228)
T TIGR00080        78 NHLKPGAKVLEIGTGSGYQAAVLAEIVGR---DGLVVSIERIPELVEKARRRLKKHHSEQLGLDNVIVIEGDGRQG-WEE  153 (228)
T ss_pred             HHCCCCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC-HHH
T ss_conf             52140355665047855899999998713---97189985357889999987654314440688658997788657-102


Q ss_pred             HHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
Q ss_conf             99973138874897532021102221015788989998898764114877469999305
Q gi|254780313|r  127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ  185 (227)
Q Consensus       127 ~i~~~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~K~F~  185 (227)
T Consensus       154 ------~APYd~I~~~AA~-----k~iP~AL~~QL------------~eGG~L~~Pv~~  189 (228)
T TIGR00080       154 ------KAPYDAILVTAAA-----KEIPKALIDQL------------EEGGILVLPVGE  189 (228)
T ss_pred             ------CCCCCEEEEECCC-----CCCCHHHHHHH------------HHCCEEEECCEE
T ss_conf             ------4883527752378-----98765789999------------728988620000