HHsearch alignment for GI: 254780313 and conserved domain: pfam03291
>pfam03291 Pox_MCEL mRNA capping enzyme. This family of enzymes are related to pfam03919.
Probab=98.16 E-value=4e-05 Score=52.60 Aligned_cols=136 Identities=17% Similarity=0.201 Sum_probs=84.2
Q ss_pred HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHH-HHHHHHCCCCCCEEEEEECCCC
Q ss_conf 999996408999999988184479999999998645831379678885045530689-9999706878832786411213
Q gi|254780313|r 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ-VAARITGSNANNTRVVAIDILD 105 (227)
Q Consensus 27 ~~W~~r~~~D~y~~~Ak~~gyrsRaafKL~eId~kf~l~k~g~~VlDLGaaPGgWsQ-va~~~~~~~~~~~~VigVDl~~ 105 (227)
T Consensus 43 NNwVKs~LI~~~~~~~~~--------------------~~~~~~VLDl~CGkGGDL~Kw~~~------~i~~~vgiDis~ 96 (327)
T pfam03291 43 NNWIKSLLISLYASKTFQ--------------------DKPKRKVLDLDCGKGGDLEKYFKG------GISGLIGTDIAE 96 (327)
T ss_pred HHHHHHHHHHHHHHHHHC--------------------CCCCCEEEEECCCCCCCHHHHHHC------CCCEEEEECCCH
T ss_conf 189999999999887514--------------------688987998368664457889747------986899966899
Q ss_pred ------------CCC---------CCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHH
Q ss_conf ------------334---------69817830112207999999973138874897532021102221015788989998
Q gi|254780313|r 106 ------------MEP---------ILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164 (227)
Q Consensus 106 ------------~~~---------i~gv~~~~gDi~~~~~~~~i~~~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~ 164 (227)
T Consensus 97 ~sI~~A~~RY~~~~~~~~~~~~~~~f~~~f~~~D~~~~~l~~~~~-~~~~~FDvVS~QFAiHY~-------Fese~~a~~ 168 (327)
T pfam03291 97 VSIEQAQERYNDLNSRSKSKYYKFDFIAEFITGDCFVSSVREVFE-PGQRKFDIVSWQFAIHYS-------FESEEKART 168 (327)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHCC-CCCCCCCEEEHHHHHHHH-------HCCHHHHHH
T ss_conf 999999999998642114444566750012315621567877535-778850377517878987-------648999999
Q ss_pred HHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHH
Q ss_conf 89876411487746999930599989999999862
Q gi|254780313|r 165 ATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199 (227)
Q Consensus 165 al~~A~~~Lk~gG~fV~K~F~G~~~~~l~~~l~~~ 199 (227)
T Consensus 169 ~l~Nvs~~Lk~GG~FIGT~~d~~---~i~~~l~~~ 200 (327)
T pfam03291 169 MLRNLAELLASGGKFIGTTPDGD---FIIKKLTAT 200 (327)
T ss_pred HHHHHHHHCCCCCEEEEEECCHH---HHHHHHHHH
T ss_conf 99999986058988999966789---999999860