HHsearch alignment for GI: 254780313 and conserved domain: pfam03602

Probab=90.16  E-value=1.6  Score=23.71  Aligned_cols=99  Identities=23%  Similarity=0.215  Sum_probs=54.0

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC---------CCC--CCCCEEEECCCCHHHHHHHHHHHCCCC
Q ss_conf             796788850455306899999706878832786411213---------334--698178301122079999999731388
Q gi|254780313|r   67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD---------MEP--ILGVKFFKFDFLDLDSWEFIRQAIGGN  135 (227)
Q Consensus        67 ~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~---------~~~--i~gv~~~~gDi~~~~~~~~i~~~l~~~  135 (227)
T Consensus        43 ~~~~~LDLFaGSGslglEAlSR-----GA~~v~fvE~~~~a~~~i~~N~~~l~~~~~-~~~~~~~~--~~~~-~~~~~~~  113 (181)
T pfam03602        43 GGARVLDLFAGSGALGLEALSR-----GASSVVFVEKDKKAVATLKENLEALGLEGA-VLRMDAAR--ALLR-LAGKGPP  113 (181)
T ss_pred             CCCEEEECCCCCCHHHHHHHHC-----CCCEEEEEECCHHHHHHHHHHHHHHCCCCE-EEECCHHH--HHHH-HCCCCCC
T ss_conf             8987998278726989999976-----998899996999999999999998589977-99810899--9987-5335788


Q ss_pred             CCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHH--HHHCCCCCCEEEEEEECC
Q ss_conf             748975320211022210157889899988987--641148774699993059
Q gi|254780313|r  136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFF--ALEMLNIGGDFLVKTFQG  186 (227)
Q Consensus       136 ~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~--A~~~Lk~gG~fV~K~F~G  186 (227)
T Consensus       114 fdiIF~D--PPY~~----------~~~~~~l~~l~~~~~l~~~~iiiiE~~~~  154 (181)
T pfam03602       114 FDLVFLD--PPYAK----------GLIEEALELLAEKGWLNPNALIVVETESD  154 (181)
T ss_pred             CCEEECC--CCCCC----------HHHHHHHHHHHHCCCCCCCEEEEEEECCC
T ss_conf             8766359--97542----------06999999999666657980999996687