HHsearch alignment for GI: 254780313 and conserved domain: pfam05206
>pfam05206 TRM13 Methyltransferase TRM13. This is a family of eukaryotic proteins which are responsible for 2'-O-methylation of tRNA at position 4. TRM13 shows no sequence similarity to other known methyltransferases.
Probab=93.64 E-value=0.5 Score=26.88 Aligned_cols=101 Identities=24% Similarity=0.323 Sum_probs=60.7
Q ss_pred HHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCC-CCEEEEEECCCC----C------CCCCCCEEEECCCCHHH
Q ss_conf 999986458313796788850455306899999706878-832786411213----3------34698178301122079
Q gi|254780313|r 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA-NNTRVVAIDILD----M------EPILGVKFFKFDFLDLD 123 (227)
Q Consensus 55 L~eId~kf~l~k~g~~VlDLGaaPGgWsQva~~~~~~~~-~~~~VigVDl~~----~------~~i~gv~~~~gDi~~~~ 123 (227)
T Consensus 6 lig~le~~~ll~~~~~~vEfGAGrG~LS~~v~~~l~~~~~~~~~~~LIDR~s~R~K~D~k~r~~~~~~~~R~riDI~DL~ 85 (256)
T pfam05206 6 LIGNLEELGLLSPSTAYVEFGAGKGELSRYLNQCLLEDQLSNPGFVLIDRASNRLKADRKIRKDESPPIKRLRIDIKDLN 85 (256)
T ss_pred HHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCEEEEEEEHHHCC
T ss_conf 99999973998999889997896469999999985234566763899988887754311021378882589995325457
Q ss_pred HHHHHHHHCCCCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999973138874897532021102221015788989998898764114
Q gi|254780313|r 124 SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML 173 (227)
Q Consensus 124 ~~~~i~~~l~~~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~L 173 (227)
T Consensus 86 L-~~v~~~~~~~~~va-----------------i~KHLCG~ATDLtLrcl 117 (256)
T pfam05206 86 L-DKLLSLLKGKPVVA-----------------VSKHLCGAATDLTLRCL 117 (256)
T ss_pred H-HHHHHHCCCCCEEE-----------------EECCCCCCHHHHHHHHH
T ss_conf 7-66443106797799-----------------94113663475999987