BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780313|ref|YP_003064726.1| ribosomal RNA
methyltransferase RrmJ/FtsJ [Candidatus Liberibacter asiaticus str.
psy62]
(227 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780313|ref|YP_003064726.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039990|gb|ACT56786.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus Liberibacter
asiaticus str. psy62]
Length = 227
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 227/227 (100%), Positives = 227/227 (100%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE
Sbjct: 1 MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL
Sbjct: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL
Sbjct: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK
Sbjct: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
>gi|222147674|ref|YP_002548631.1| cell division protein [Agrobacterium vitis S4]
gi|254809545|sp|B9JSD2|RLME_AGRVS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|221734662|gb|ACM35625.1| cell division protein [Agrobacterium vitis S4]
Length = 261
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 137/228 (60%), Positives = 177/228 (77%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M KPP G+ + R L QKVK + SSR WL RHINDPYVQRA+LEG+RAR+A+KLL+I
Sbjct: 1 MTKPPIGGNRTGRKLGQKVKKGKLKASSRRWLERHINDPYVQRAKLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EKH IL+ RRI+DLG++PGSWSQ+AA +TGS ++ RV AID L+M + GVK + D
Sbjct: 61 DEKHNILKGARRIIDLGAAPGSWSQIAANVTGSTDSDIRVAAIDFLEMTQLPGVKILQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + + +A+GG PD+V+SDMA PT GH+K DH+RTM LCE A +FA+E+L GG
Sbjct: 121 FLDPQAPALLMEAVGGVPDVVISDMAAPTTGHQKTDHIRTMHLCEVAAYFAVEVLAEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT D+L +LK++F++VIH+KP +SR ESVEMFLLAKGF+
Sbjct: 181 FLAKTFQGGTEKDLLNMLKQNFKQVIHIKPASSRQESVEMFLLAKGFK 228
>gi|328544053|ref|YP_004304162.1| ribosomal RNA large subunit methyltransferase J [polymorphum gilvum
SL003B-26A1]
gi|326413797|gb|ADZ70860.1| Ribosomal RNA large subunit methyltransferase J [Polymorphum gilvum
SL003B-26A1]
Length = 240
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 119/228 (52%), Positives = 156/228 (68%), Gaps = 2/228 (0%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M S RGL +VK + SS WL R +NDPYV+RA++EG+R+R+AYKL++I+
Sbjct: 1 MSGSKRGSGDRGLHVRVKTAAKRKESSTRWLERQLNDPYVRRAKMEGYRSRAAYKLIEID 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+KH++L+ +R+VDLG++PG W QVA GS N VV ID LDM+ I GV F + DF
Sbjct: 61 DKHRLLKPGQRVVDLGAAPGGWCQVAVERVGSTPENPLVVGIDYLDMDHIPGVVFLRKDF 120
Query: 120 LDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
LD D+ + A+GG+ PD+VLSDMA PT GHR+ DHLRT L E A FA E L GG
Sbjct: 121 LDDDAPAALMAALGGHRPDVVLSDMAAPTTGHRQTDHLRTTHLFEVAILFARENLAPGGS 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL K F+GGT N +L LK+ F+ V+HVKP ASR ES E++++AKGFR
Sbjct: 181 FLAKVFRGGTENALLADLKRDFETVVHVKPPASRKESPELYVVAKGFR 228
>gi|241203222|ref|YP_002974318.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240857112|gb|ACS54779.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length = 239
Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 139/228 (60%), Positives = 179/228 (78%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P G+ + R L Q+VKN+ + SSR WL RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKAPIAGNRTGRKLGQRVKNKKMKASSRQWLERHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EKH IL+ RRI+DLG++PGSWSQ+AA++TGS ++ RV AID L+M + GVK + D
Sbjct: 61 DEKHHILRGARRIIDLGAAPGSWSQIAAKVTGSTDDDIRVAAIDFLEMTQLPGVKILQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + E + +A+GG PDLV+SDMA PT GH + DHLRTM LCE A FA+E+L GG
Sbjct: 121 FLDPTAPEKLLEAVGGTPDLVISDMAAPTTGHHRTDHLRTMHLCEVAAHFAVEVLGEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT ++L +LK++F++V+HVKP +SRAESVEMFLLAKGF+
Sbjct: 181 FLTKTFQGGTERELLAMLKQNFRQVVHVKPNSSRAESVEMFLLAKGFK 228
>gi|116250616|ref|YP_766454.1| ribosomal RNA methyltransferase/cell division FtsJ protein
[Rhizobium leguminosarum bv. viciae 3841]
gi|143461320|sp|Q1ML15|RLME_RHIL3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|115255264|emb|CAK06339.1| putative ribosomal RNA methyltransferase/cell division FtsJ protein
[Rhizobium leguminosarum bv. viciae 3841]
Length = 239
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 139/228 (60%), Positives = 179/228 (78%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P G+ + R L Q+VKN+ + SSR WL RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKAPIAGNRTGRKLGQRVKNKKMKASSRQWLERHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EKH IL+ RRI+DLG++PGSWSQ+AA++TGS ++ RV AID L+M + GVK + D
Sbjct: 61 DEKHHILRGARRIIDLGAAPGSWSQIAAKVTGSTDDDIRVAAIDFLEMTQLPGVKILQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + E + +A+GG PDLV+SDMA PT GH + DHLRTM LCE A FA+E+L GG
Sbjct: 121 FLDPSAPEKLLEAVGGTPDLVISDMAAPTTGHHRTDHLRTMHLCEVAAHFAVEVLGEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT ++L +LK++F++V+HVKP +SRAESVEMFLLAKGF+
Sbjct: 181 FLTKTFQGGTERELLAMLKQNFRQVVHVKPNSSRAESVEMFLLAKGFK 228
>gi|163758367|ref|ZP_02165455.1| probable cell division protein [Hoeflea phototrophica DFL-43]
gi|162284656|gb|EDQ34939.1| probable cell division protein [Hoeflea phototrophica DFL-43]
Length = 247
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 130/226 (57%), Positives = 172/226 (76%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
M KPP + R L QKVK + SSR W+ RH+NDPYVQ+A+ EG+R+R+ YKLL+I+
Sbjct: 1 MTKPPTGPTGRKLGQKVKKGKLKASSRRWVERHLNDPYVQQARQEGYRSRAVYKLLEIDT 60
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
KH+IL RRI+DLG++PG WSQ++A++T S + +VVAID L+M+ + GV+F + DFL
Sbjct: 61 KHKILDKARRIIDLGAAPGGWSQISAKVTDSTDADPKVVAIDFLEMDGLPGVRFLQMDFL 120
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
D + + A+GG PD+VLSDMA PT GHR+ DHLRTM LCE A FA+E+L GG FL
Sbjct: 121 DDAAPRALMDALGGAPDVVLSDMAAPTTGHRRTDHLRTMHLCEVAAHFAVEVLAPGGHFL 180
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
KTFQGG+ ND+L +LKK+F+ VIH+KP +SRAESVEMF+LAKGF+
Sbjct: 181 AKTFQGGSENDLLVMLKKNFKSVIHIKPPSSRAESVEMFVLAKGFK 226
>gi|190890496|ref|YP_001977038.1| ribosomal RNA methyltransferase/cell division protein [Rhizobium
etli CIAT 652]
gi|226705303|sp|B3PQL4|RLME_RHIE6 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|190695775|gb|ACE89860.1| ribosomal RNA methyltransferase/cell division protein [Rhizobium
etli CIAT 652]
Length = 239
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 139/228 (60%), Positives = 178/228 (78%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P G+ + R L Q+VKN+ + SSR WL RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKAPIAGNRTGRKLGQRVKNKKMKASSRQWLQRHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EK+ IL+ RRI+DLG++PGSWSQ+AA++TGS + RV AID L+M + GVK + D
Sbjct: 61 DEKYHILRGARRIIDLGAAPGSWSQIAAKVTGSTDEDIRVAAIDFLEMAQLPGVKILQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + E + +A+GG PDLV+SDMA PT GH + DHLRTM LCE A FA+E+L GG
Sbjct: 121 FLDPSAPEKLMEAVGGTPDLVISDMAAPTTGHHRTDHLRTMHLCEVAAHFAIEVLGEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT D+L +LK++F++V+HVKP +SRAESVEMFLLAKGF+
Sbjct: 181 FLTKTFQGGTERDLLAMLKQNFRQVVHVKPNSSRAESVEMFLLAKGFK 228
>gi|222084954|ref|YP_002543483.1| cell division protein [Agrobacterium radiobacter K84]
gi|254809544|sp|B9J9U0|RLME_AGRRK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|221722402|gb|ACM25558.1| cell division protein [Agrobacterium radiobacter K84]
Length = 239
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 141/228 (61%), Positives = 180/228 (78%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M KP G+ + R L Q+VK + + SSR+WL+RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKPTIAGNRTGRKLGQRVKKKKLKASSREWLHRHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EKHQIL+ RRI+DLG++PGSWSQ+AA++TGS ++ RV AID L+M + GV + D
Sbjct: 61 DEKHQILKGARRIIDLGAAPGSWSQIAAKVTGSTEDDIRVAAIDFLEMAHLPGVTILQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD D+ + + A+GG PDLV+SDMA PT GH + DHLRTM LCE A FA+E+L GG
Sbjct: 121 FLDPDAPQRLVDAVGGEPDLVMSDMAAPTTGHHRTDHLRTMHLCEVAAHFAIEVLAEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT D+L LLK++F++V+HVKP ASRAESVEMFLLAKGF+
Sbjct: 181 FLAKTFQGGTERDLLNLLKQNFRQVVHVKPGASRAESVEMFLLAKGFK 228
>gi|209548035|ref|YP_002279952.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|226705304|sp|B5ZR94|RLME_RHILW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|209533791|gb|ACI53726.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length = 239
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 139/228 (60%), Positives = 178/228 (78%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P G+ + R L Q+VKN+ + SSR WL RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKAPIAGNRTGRKLGQRVKNKKMKASSRQWLQRHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EKH IL+ +RI+DLG++PGSWSQ+AA++TGS + RV AID L+M + GVK + D
Sbjct: 61 DEKHHILRGAKRIIDLGAAPGSWSQIAAKVTGSTDEDIRVAAIDFLEMAQLPGVKILQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + E + +A+GG PDLV+SDMA PT GH + DHLRTM LCE A FA+E+L GG
Sbjct: 121 FLDPTAPEKLLEAVGGTPDLVISDMAAPTTGHHRTDHLRTMHLCEVAAQFAVEVLGEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT ++L +LK++F++V+HVKP ASRAESVEMFLLAKGF+
Sbjct: 181 FLTKTFQGGTERELLAMLKQNFRQVVHVKPNASRAESVEMFLLAKGFK 228
>gi|327189976|gb|EGE57100.1| ribosomal RNA methyltransferase/cell division protein [Rhizobium
etli CNPAF512]
Length = 239
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 139/228 (60%), Positives = 178/228 (78%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P G+ + R L Q+VKN+ + SSR WL RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKAPIAGNRTGRKLGQRVKNKKMKASSRQWLQRHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EK+ IL+ RRI+DLG++PGSWSQ+AA++TGS + RV AID L+M + GVK + D
Sbjct: 61 DEKYHILRGARRIIDLGAAPGSWSQIAAKVTGSTDEDIRVAAIDFLEMAQLPGVKILQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + E + +A+GG PDLV+SDMA PT GH + DHLRTM LCE A FA+E+L GG
Sbjct: 121 FLDPSAPEKLMEAVGGTPDLVISDMAAPTTGHHRTDHLRTMHLCEVAAHFAIEVLGEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT D+L +LK++F++V+HVKP +SRAESVEMFLLAKGF+
Sbjct: 181 FLTKTFQGGTERDLLAMLKQNFRQVVHVKPNSSRAESVEMFLLAKGFK 228
>gi|13476893|ref|NP_108462.1| cell division protein ftsJ [Mesorhizobium loti MAFF303099]
gi|81776173|sp|Q983F8|RLME_RHILO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|14027654|dbj|BAB53923.1| cell division protein; FtsJ [Mesorhizobium loti MAFF303099]
Length = 265
Score = 230 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 123/230 (53%), Positives = 166/230 (72%), Gaps = 4/230 (1%)
Query: 1 MVKPP---GSSSRRGLTQKVKNRS-CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLL 56
M K P GS+ R L ++K +S + SSR WL RHINDPYVQR++ +G+R+R+AYKL+
Sbjct: 1 MTKKPENPGSAGIRVLKTRIKKKSGLKESSRRWLQRHINDPYVQRSKADGYRSRAAYKLI 60
Query: 57 QINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFK 116
+I++KH +L+ +++DLG++PG W QVAA T S A N VV ID L+M+ + G
Sbjct: 61 EIDDKHHLLKPGMKVIDLGAAPGGWCQVAAARTKSTAENPHVVGIDYLEMDAVPGAPVLL 120
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DFLD D+ + + +A+GGNPD+VLSDMA PT GH++ DH+RTM LCE A FAL +L G
Sbjct: 121 MDFLDPDAPQKLAEALGGNPDVVLSDMAAPTTGHKRTDHIRTMHLCEVAADFALSVLKPG 180
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G FL KTFQGG N++L +LKK+F+ V HVKP ASR ESVE++LLAK F+
Sbjct: 181 GHFLAKTFQGGAENELLSMLKKNFRSVHHVKPPASRDESVELYLLAKDFK 230
>gi|86356435|ref|YP_468327.1| cell division protein [Rhizobium etli CFN 42]
gi|123512933|sp|Q2KC36|RLME_RHIEC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|86280537|gb|ABC89600.1| cell division protein [Rhizobium etli CFN 42]
Length = 239
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 136/228 (59%), Positives = 176/228 (77%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P G+ + R L Q+VKN+ + SSR WL RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKAPIAGNRTGRKLGQRVKNKKMKASSRQWLQRHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EK+ IL+ +RI+DLG++PGSWSQ+AA++TGS + RV AID L+M + GV + D
Sbjct: 61 DEKYHILRGAKRIIDLGAAPGSWSQIAAKVTGSTDEDIRVAAIDFLEMAQLPGVWILQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + + +A+GG PDLV+SDMA PT GH + DHLRTM LCE A FA+E+L GG
Sbjct: 121 FLDPSAPGKLMEAVGGTPDLVISDMAAPTTGHHRTDHLRTMHLCEVAAHFAIEVLGEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT D+L +LK++F++V+HVKP +SRAESVEMFLLAKGF+
Sbjct: 181 FLTKTFQGGTERDLLAMLKQNFRQVVHVKPNSSRAESVEMFLLAKGFK 228
>gi|150395598|ref|YP_001326065.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sinorhizobium medicae
WSM419]
gi|189040341|sp|A6U6F0|RLME_SINMW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150027113|gb|ABR59230.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sinorhizobium medicae
WSM419]
Length = 245
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 141/228 (61%), Positives = 178/228 (78%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M KPP + S R L QKVK + SSR W+ RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKPPVGSNRSGRKLGQKVKKGKLKASSRRWIERHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EKH+IL RRI+DLG++PGSWSQ+AA++T S + RV AID L+M+ I GV F + D
Sbjct: 61 DEKHKILAGARRIIDLGAAPGSWSQIAAKVTNSTDTDPRVAAIDFLEMDAIPGVSFLQMD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + E +++AIGG PD+VLSDMA PT GHR+ DH+RTM LCE A FA+E+L GG
Sbjct: 121 FLDPQAPEKLKEAIGGAPDIVLSDMAAPTTGHRQTDHIRTMHLCEVAAHFAVEVLAEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT D+L +LK++F++V+HVKP +SRAESVEMFLLAKGF+
Sbjct: 181 FLAKTFQGGTERDLLNMLKQNFRQVVHVKPASSRAESVEMFLLAKGFK 228
>gi|15964509|ref|NP_384862.1| cell division protein [Sinorhizobium meliloti 1021]
gi|307308457|ref|ZP_07588161.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sinorhizobium meliloti
BL225C]
gi|307319020|ref|ZP_07598451.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sinorhizobium meliloti
AK83]
gi|81635050|sp|Q92RT9|RLME_RHIME RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|15073686|emb|CAC45328.1| Probable cell division protein [Sinorhizobium meliloti 1021]
gi|306895434|gb|EFN26189.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sinorhizobium meliloti
AK83]
gi|306901060|gb|EFN31668.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sinorhizobium meliloti
BL225C]
Length = 245
Score = 228 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 142/228 (62%), Positives = 181/228 (79%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P G+ S R L QKVK + SSR W+ RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKSPIGGNRSGRKLGQKVKKGKLKASSRRWIERHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EKH+IL +RI+DLG++PGSWSQ+AA++T S + RV AID L+M+PI GV+F + D
Sbjct: 61 DEKHKILAGAKRIIDLGAAPGSWSQIAAKVTNSTDADPRVAAIDFLEMDPIPGVRFLQMD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD ++ E ++QAIGG PD+VLSDMA PT GHR+ DH+RTM LCE A FA+E+L GG
Sbjct: 121 FLDPEAPENLKQAIGGAPDIVLSDMAAPTTGHRQTDHIRTMHLCEVAAHFAVEVLAEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT D+L +LK++F++V+HVKP +SRAESVEMFLLAKGF+
Sbjct: 181 FLAKTFQGGTERDLLNMLKQNFRQVVHVKPASSRAESVEMFLLAKGFK 228
>gi|114705167|ref|ZP_01438075.1| cell division protein ftsJ [Fulvimarina pelagi HTCC2506]
gi|114539952|gb|EAU43072.1| cell division protein ftsJ [Fulvimarina pelagi HTCC2506]
Length = 244
Score = 228 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 111/217 (51%), Positives = 162/217 (74%), Gaps = 1/217 (0%)
Query: 11 RGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
RGL KVK + + SSR W+ R +NDPYV++A+ +G+R+R+AYKL+++++++++L+ +
Sbjct: 8 RGLHVKVKKKRGLKASSRRWIERQLNDPYVRQAKADGYRSRAAYKLIEMDDRYKLLKPGQ 67
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
R+VDLG++PG W QV+ GS ++ RVV ID L+++P+ G + DFLD ++ + +
Sbjct: 68 RVVDLGAAPGGWCQVSVERVGSENDDIRVVGIDFLEVDPVSGAEILLMDFLDDEAPDRLM 127
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
+A+GG+PD+VLSDMA PTIGHR+ DHLRTM LCE A FA+ L GG FL KTFQGGT
Sbjct: 128 EALGGSPDIVLSDMAAPTIGHRQTDHLRTMHLCEVAADFAVRTLKPGGHFLCKTFQGGTE 187
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
D+L LLK++F+ V HVKP ASR SVE+++LAK F+
Sbjct: 188 RDLLELLKRNFKAVHHVKPPASRDGSVELYILAKDFK 224
>gi|319784202|ref|YP_004143678.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317170090|gb|ADV13628.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 247
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 120/230 (52%), Positives = 166/230 (72%), Gaps = 4/230 (1%)
Query: 1 MVKPP---GSSSRRGLTQKVKNRS-CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLL 56
M K P GS+S R L ++K +S + SSR WL RHINDPYVQR++ +G+R+R+AYKL+
Sbjct: 1 MTKKPEKPGSASIRVLKTRIKKKSGLKESSRRWLQRHINDPYVQRSKADGYRSRAAYKLI 60
Query: 57 QINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFK 116
+I++KH +L+ +++DLG++PG W QVAA T S A+ V+ ID L+M+ + G
Sbjct: 61 EIDDKHHLLKPGMKVIDLGAAPGGWCQVAAARTKSTADKPHVIGIDYLEMDAVPGAPVLL 120
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DFLD + + + +A+GG+PD+VLSDMA PT GH++ DH+RTM LCE A FAL +L G
Sbjct: 121 MDFLDPQAPQKLAEALGGDPDIVLSDMAAPTTGHKRTDHIRTMHLCEVAADFALSVLKPG 180
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G FL KTFQGG N++L +LKK+F+ V HVKP ASR ESVE++LLAK F+
Sbjct: 181 GHFLAKTFQGGAENELLSMLKKNFRSVHHVKPPASRDESVELYLLAKDFK 230
>gi|118589174|ref|ZP_01546581.1| cell division protein ftsJ [Stappia aggregata IAM 12614]
gi|118438503|gb|EAV45137.1| cell division protein ftsJ [Stappia aggregata IAM 12614]
Length = 235
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 110/228 (48%), Positives = 155/228 (67%), Gaps = 2/228 (0%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M + + RGL KVK + SS WL R +NDPYV+RA+++G+R+R+AYKL++I+
Sbjct: 1 MSQGKKGTGDRGLHVKVKTSAGRRESSTRWLQRQLNDPYVRRAKMDGYRSRAAYKLIEID 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+KH++L+ R+VDLG +PG W QVA + S+ + +VV ID L+M+ + G F + DF
Sbjct: 61 DKHKLLKPGYRVVDLGCAPGGWCQVAVQRVQSSVDAPKVVGIDYLEMDHVRGTTFLQKDF 120
Query: 120 LDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
LD D+ + +A+GG+ PD+VLSDMA PT GH++ DHLRT L E A FA L GG
Sbjct: 121 LDDDAPAALMEALGGHKPDVVLSDMAAPTTGHKQTDHLRTTHLFEIAIDFARRNLVPGGS 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL K F+GGT N +L LK+ F+ V H+KP ASR ES E++++AKGFR
Sbjct: 181 FLAKVFRGGTENALLHDLKREFKSVAHIKPPASRKESPELYVIAKGFR 228
>gi|227820952|ref|YP_002824922.1| putative ribosomal RNA large subunit methyltransferase J
[Sinorhizobium fredii NGR234]
gi|254809557|sp|C3MGQ4|RLME_RHISN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|227339951|gb|ACP24169.1| putative ribosomal RNA large subunit methyltransferase J
[Sinorhizobium fredii NGR234]
Length = 245
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 144/228 (63%), Positives = 179/228 (78%), Gaps = 2/228 (0%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P G+ S R L QKVK + SSR WL RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKSPIGGNRSGRKLGQKVKKGKLKASSRRWLERHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EKH+IL RRI+DLG++PGSWSQ+AA++T S + RV AID L+M+PI GV+F + D
Sbjct: 61 DEKHKILAGARRIIDLGAAPGSWSQIAAKVTNSTDADPRVAAIDFLEMDPIPGVRFLQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD ++ E +++AIGG PDLVLSDMA PT GHR+ DHLRTM LCE A FA+++L GG
Sbjct: 121 FLDPEAPEKLKEAIGGTPDLVLSDMAAPTTGHRQTDHLRTMHLCEVAAHFAVDVLAKGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT D+L +LK++F +VIHVKP +SR ESVEMFLLAKGF+
Sbjct: 181 FLAKTFQGGTERDLLNMLKQNFSQVIHVKPASSRTESVEMFLLAKGFK 228
>gi|154251621|ref|YP_001412445.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Parvibaculum
lavamentivorans DS-1]
gi|189040318|sp|A7HSA5|RLME_PARL1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|154155571|gb|ABS62788.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Parvibaculum
lavamentivorans DS-1]
Length = 254
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 104/224 (46%), Positives = 148/224 (66%), Gaps = 8/224 (3%)
Query: 11 RGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
R L +VK R SS WL R +NDPYV A+ EG+R+R+A+KL +I++K++ L+
Sbjct: 20 RALKVRVKTARKRSNSSTRWLQRQLNDPYVHAAKREGYRSRAAFKLAEIDDKYRFLKPGG 79
Query: 70 RIVDLGSSPGSWSQVAARIT-------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDL 122
R+VDLG +PG W QVA G+ + RV+ +D L+M+P+ G + DFL
Sbjct: 80 RVVDLGCAPGGWCQVAVARVKAEGGDAGAEGRHGRVIGLDYLEMDPVPGATILQLDFLSE 139
Query: 123 DSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
+ + +++ + G D+VLSDMA PT GH++ DH+R MSLCE A FA E+L GG FL K
Sbjct: 140 GADDQVKELLAGEADVVLSDMAAPTTGHKQTDHMRIMSLCEIAAHFATEVLAPGGTFLAK 199
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GGT N++L LLK+HF+ V HVKP ASRA+S EM++LA+GF+
Sbjct: 200 VLRGGTENELLVLLKQHFKTVRHVKPKASRADSAEMYVLAQGFK 243
>gi|90420028|ref|ZP_01227937.1| ribosomal RNA large subunit methyltransferase J [Aurantimonas
manganoxydans SI85-9A1]
gi|90336069|gb|EAS49817.1| ribosomal RNA large subunit methyltransferase J [Aurantimonas
manganoxydans SI85-9A1]
Length = 255
Score = 225 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 114/222 (51%), Positives = 156/222 (70%), Gaps = 1/222 (0%)
Query: 6 GSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQI 64
G S RG+T KVK + + SSR WL R +NDPYV+RA+ +G+R+R+AYKL+++++++++
Sbjct: 4 GRSDSRGMTVKVKKKRGLKLSSRRWLERQLNDPYVRRAKADGYRSRAAYKLIEMDDRYKL 63
Query: 65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
L+ RIVDLG++PG W QVA TGS A + RVV ID L +EP+ G DFLD +
Sbjct: 64 LKPGHRIVDLGAAPGGWCQVAVDRTGSTAADVRVVGIDYLTVEPVAGATILLMDFLDDAA 123
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
+ + + +G PD+VLSD+A PT GHR DH+RTM LC+ A FA+ L GG FL KTF
Sbjct: 124 PDKLMETLGEAPDIVLSDLAAPTTGHRPTDHIRTMHLCDVAADFAIRTLKPGGHFLAKTF 183
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
QGGT ++L LLK+HF V HVKP ASR SVE+++LAK F+
Sbjct: 184 QGGTERELLTLLKRHFVSVHHVKPPASREGSVELYILAKSFK 225
>gi|114569722|ref|YP_756402.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Maricaulis maris MCS10]
gi|122316269|sp|Q0AQH3|RLME_MARMM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114340184|gb|ABI65464.1| 23S rRNA Um-2552 2'-O-methyltransferase [Maricaulis maris MCS10]
Length = 279
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 151/227 (66%), Gaps = 6/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K + + + + ++VK R + SS WL R +NDPYV++AQ+EG+R+R+AYKLLQ++
Sbjct: 57 MKKGGDARAAKQMFERVKTARGRKSSSTRWLQRQLNDPYVKKAQMEGYRSRAAYKLLQLD 116
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
E+ ++L+ R+VDLGS+PG W QVA + + + VV ID+L+ME I G + DF
Sbjct: 117 ERFKLLKPGMRVVDLGSAPGGWVQVALK-----SGASEVVGIDLLEMEAIAGATLLEKDF 171
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
D D+ ++ +GG D V+SD+A T GH+ DHLR ++L E A FA+E L GG F
Sbjct: 172 TDADAPSLVKAEMGGAADAVVSDLAPWTTGHKTTDHLRIVALAELAAHFAVETLKPGGFF 231
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K FQGG+ +D+L LK +F+KV H KP ASR+ES E F++A GF+
Sbjct: 232 IAKVFQGGSDSDLLNFLKANFEKVRHFKPDASRSESAETFVVAMGFK 278
>gi|307947081|ref|ZP_07662416.1| ribosomal RNA large subunit methyltransferase J [Roseibium sp.
TrichSKD4]
gi|307770745|gb|EFO29971.1| ribosomal RNA large subunit methyltransferase J [Roseibium sp.
TrichSKD4]
Length = 231
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 115/228 (50%), Positives = 151/228 (66%), Gaps = 2/228 (0%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M + S RGL +VK + SS WL R +NDPYV+RA+ +G+R+R+AYKLL+I+
Sbjct: 1 MSRGKKGSGDRGLHVRVKTSAGRRESSTRWLERQLNDPYVRRAKADGYRSRAAYKLLEID 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
EKH++L+ R+VDLG++PG W QVA S + +VV ID LDM+ + G+ F K DF
Sbjct: 61 EKHRLLKPGYRVVDLGAAPGGWCQVAVDKVKSTEDAPKVVGIDYLDMDYLPGLAFLKKDF 120
Query: 120 LDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
LD D+ E + GG PDLVLSDMA T GHR+ DHLRT L E A FA + L GG
Sbjct: 121 LDDDAPEALMNALGGGLPDLVLSDMAARTTGHRQTDHLRTTHLFEVAVDFARQNLVPGGS 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL K F+GGT N +L +K+ F+ V HVKP ASR ES E++++AKGFR
Sbjct: 181 FLAKVFRGGTENQLLTEMKRDFKSVAHVKPPASRKESPELYVIAKGFR 228
>gi|296445113|ref|ZP_06887073.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylosinus
trichosporium OB3b]
gi|296257287|gb|EFH04354.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylosinus
trichosporium OB3b]
Length = 235
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 108/229 (47%), Positives = 150/229 (65%), Gaps = 3/229 (1%)
Query: 1 MVKPPGSS--SRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
M K S R L +VK R SS WL R +NDPYV +A+ +G+R+R+AYKLL+
Sbjct: 1 MTKSGASGREGGRSLKTRVKTARKRSLSSTLWLERQLNDPYVAQAKRDGYRSRAAYKLLE 60
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
++E+ + + +RI DLG++PG WSQ+AAR G+ RVV ID+L+MEP+ GV+F
Sbjct: 61 LDERFHLFRPGQRIADLGAAPGGWSQIAARKVGAGQGKGRVVGIDLLEMEPVQGVEFTVM 120
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DF D D+ E I++ +GG D V+SDMA GH++ DHL+ ++L E A FA E+L GG
Sbjct: 121 DFNDADAPERIKEMLGGPADGVMSDMAANATGHKQTDHLKIVALAELAVEFAREVLAPGG 180
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K QGGT + +L LK+ F V HVKP ASRA+S E+++LA GFR
Sbjct: 181 FFVAKVLQGGTEHTLLAELKRDFAVVRHVKPAASRADSAELYVLATGFR 229
>gi|260466890|ref|ZP_05813074.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Mesorhizobium
opportunistum WSM2075]
gi|259029392|gb|EEW30684.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Mesorhizobium
opportunistum WSM2075]
Length = 236
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 120/230 (52%), Positives = 166/230 (72%), Gaps = 4/230 (1%)
Query: 1 MVKPP---GSSSRRGLTQKVKNRS-CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLL 56
M K P GS+S R L ++K +S + SSR WL RHINDPYVQR++ +G+R+R+AYKL+
Sbjct: 1 MTKKPEKPGSASIRVLKTRIKKKSGLKESSRRWLQRHINDPYVQRSKADGYRSRAAYKLI 60
Query: 57 QINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFK 116
+I++KH +L+ +++DLG++PG W QVAA T S A N V+ ID L+M+ + G
Sbjct: 61 EIDDKHHLLKPGMKVIDLGAAPGGWCQVAAARTKSTAENPHVIGIDYLEMDAVPGAPVLL 120
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DFL+ + + + +A+GG+PD+VLSDMA PT GH++ DH+RTM LCE A FAL +L G
Sbjct: 121 MDFLNPAAPQKLAEALGGDPDVVLSDMAAPTTGHKRTDHIRTMHLCEVAADFALSVLKPG 180
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G FL KTFQGG N++L +LKK+F+ V HVKP ASR ESVE++LLAK F+
Sbjct: 181 GHFLAKTFQGGAENELLSMLKKNFRSVHHVKPPASRDESVELYLLAKDFK 230
>gi|239834096|ref|ZP_04682424.1| Ribosomal RNA large subunit methyltransferase J [Ochrobactrum
intermedium LMG 3301]
gi|239822159|gb|EEQ93728.1| Ribosomal RNA large subunit methyltransferase J [Ochrobactrum
intermedium LMG 3301]
Length = 241
Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 112/223 (50%), Positives = 163/223 (73%), Gaps = 2/223 (0%)
Query: 6 GSSSRRGLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
G + L +VK + + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++IN+++
Sbjct: 18 GGAGSSNLQVRVKKKAGTIKESSRRWLQRHLNDPYVHKSKQDGYRSRAAYKLIEINDRYN 77
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
+L+ ++I+DLG++PG WSQ+AA++ GS + VV ID L ++P+ GV + DFLD +
Sbjct: 78 LLKKGQKIIDLGAAPGGWSQIAAKVVGSTDEDPHVVGIDYLHVDPLPGVVLLEMDFLDDE 137
Query: 124 SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ + +A+G PDLV+SDMA PT GHR+ DHLRT+ LCE A FA+ +L GG FL KT
Sbjct: 138 APRKLMEALGDKPDLVISDMAAPTTGHRRTDHLRTVHLCEVAADFAISVLKPGGHFLTKT 197
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FQGGT N++L LLK+ F+ V HVKP ASRAESVE++LLA+ F+
Sbjct: 198 FQGGTENELLALLKQKFRSVHHVKPPASRAESVELYLLARDFK 240
>gi|325292005|ref|YP_004277869.1| cell division protein [Agrobacterium sp. H13-3]
gi|325059858|gb|ADY63549.1| cell division protein [Agrobacterium sp. H13-3]
Length = 246
Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats.
Identities = 133/228 (58%), Positives = 176/228 (77%), Gaps = 2/228 (0%)
Query: 1 MVKPPGS--SSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P S + R + QKVK + SSR WL RHINDPYVQRA+LEG+RAR+A+KLL+I
Sbjct: 1 MSKAPTSTNRTGRKIGQKVKKTKLKASSRRWLERHINDPYVQRAKLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
N+KHQIL+ RI+DLG++PGSWSQ+A+++T S ++ RV AID L+++PI GVK + D
Sbjct: 61 NDKHQILKGATRIIDLGAAPGSWSQIASKVTDSTEDDIRVAAIDFLEIDPIPGVKILQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + + + +A+GG PDLVLSDMA PT GH+K DH+RTM LCE A FA+++L GG
Sbjct: 121 FLDPTAPDQLMEAVGGTPDLVLSDMAAPTTGHQKTDHIRTMHLCEVAADFAVQVLAEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT +L +LKK+F++V+H+KP +SR+ESVEMFLLAK F+
Sbjct: 181 FLAKTFQGGTEKALLDMLKKNFKQVLHIKPASSRSESVEMFLLAKHFK 228
>gi|159184390|ref|NP_353643.2| cell division protein [Agrobacterium tumefaciens str. C58]
gi|81496462|sp|Q8UHR0|RLME_AGRT5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|159139703|gb|AAK86428.2| cell division protein [Agrobacterium tumefaciens str. C58]
Length = 246
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 133/228 (58%), Positives = 176/228 (77%), Gaps = 2/228 (0%)
Query: 1 MVKPPGS--SSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P S + R + QKVK + SSR WL RHINDPYVQRA+LEG+RAR+A+KLL+I
Sbjct: 1 MSKAPTSTNRTGRKIGQKVKKTKLKASSRRWLERHINDPYVQRAKLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
N+KHQIL+ RI+DLG++PGSWSQ+A+++T S ++ RV AID L+++PI GVK + D
Sbjct: 61 NDKHQILKGATRIIDLGAAPGSWSQIASKVTDSTEDDIRVAAIDFLEIDPIPGVKILQLD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + + + +A+GG PDLVLSDMA PT GH+K DH+RTM LCE A FA+++L GG
Sbjct: 121 FLDPTAPDQLMEAVGGTPDLVLSDMAAPTTGHQKTDHIRTMHLCEVAADFAVQVLAEGGH 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT +L +LKK+F++V+H+KP +SR+ESVEMFLLAK F+
Sbjct: 181 FLAKTFQGGTEKALLDMLKKNFKQVLHIKPASSRSESVEMFLLAKHFK 228
>gi|254720340|ref|ZP_05182151.1| Ribosomal RNA large subunit methyltransferase J [Brucella sp.
83/13]
gi|265985356|ref|ZP_06098091.1| ribosomal RNA large subunit methyltransferase J [Brucella sp.
83/13]
gi|306837434|ref|ZP_07470310.1| Ribosomal RNA large subunit methyltransferase J [Brucella sp. NF
2653]
gi|264663948|gb|EEZ34209.1| ribosomal RNA large subunit methyltransferase J [Brucella sp.
83/13]
gi|306407477|gb|EFM63680.1| Ribosomal RNA large subunit methyltransferase J [Brucella sp. NF
2653]
Length = 240
Score = 220 bits (559), Expect = 1e-55, Method: Composition-based stats.
Identities = 114/217 (52%), Positives = 162/217 (74%), Gaps = 2/217 (0%)
Query: 12 GLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
L +VK + + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++IN+++ +L+ +
Sbjct: 23 NLHVRVKKKAGTIKESSRRWLERHLNDPYVHKSRQDGYRSRAAYKLIEINDRYNLLKKGQ 82
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
+I+DLG++PG WSQ+AARI GS N +VV ID L ++P+ GV + DFLD ++ + +
Sbjct: 83 KIIDLGAAPGGWSQIAARIVGSTDENPQVVGIDYLHVDPLPGVILLEMDFLDDEAPQKLM 142
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
A+G PDLV+SDMA PT GHR+ DHLRT+ LCE A FA+ +L GG FL KTFQGGT
Sbjct: 143 DALGDKPDLVISDMAAPTTGHRRTDHLRTVHLCEVAADFAVSVLKPGGHFLTKTFQGGTE 202
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
N++L LLK+ F+ V HVKP ASRAESVE++LLA+ F+
Sbjct: 203 NELLALLKQRFRSVHHVKPPASRAESVELYLLARDFK 239
>gi|254473353|ref|ZP_05086750.1| ribosomal RNA large subunit methyltransferase J [Pseudovibrio sp.
JE062]
gi|211957469|gb|EEA92672.1| ribosomal RNA large subunit methyltransferase J [Pseudovibrio sp.
JE062]
Length = 233
Score = 220 bits (559), Expect = 1e-55, Method: Composition-based stats.
Identities = 118/230 (51%), Positives = 157/230 (68%), Gaps = 4/230 (1%)
Query: 1 MVKPPGSSSR--RGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
M + RG+ Q+VK R SS WL R +NDPYV+RA+++G+R+R+AYKL++
Sbjct: 1 MTRNSSGRGSGDRGMFQRVKTARKRSNSSTLWLQRQLNDPYVRRAKVDGYRSRAAYKLIE 60
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
INEKH+IL+ R+VDLG +PG WSQ+ A I GS ++ VV ID L++EPI GV +
Sbjct: 61 INEKHEILKPGMRVVDLGCAPGGWSQLTAPIVGSTDDDPLVVGIDYLEVEPIPGVVILQK 120
Query: 118 DFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DFLD D+ + + +A+GG+ PDLV+SDMA PT GHR+ DHLRT L E A FA + LN G
Sbjct: 121 DFLDDDAPDELMKALGGHRPDLVMSDMAAPTTGHRQTDHLRTTYLFEIAIDFARQNLNEG 180
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G FL K F GG +L LKK F+ V+H+KP ASR S EMF+LA+G+R
Sbjct: 181 GTFLSKVFAGGAEASLLQDLKKEFKSVVHIKPPASRKGSPEMFILARGYR 230
>gi|315122262|ref|YP_004062751.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495664|gb|ADR52263.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 242
Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 194/227 (85%), Positives = 210/227 (92%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
MVK G SSRRGL QKVKN SCQ SS WL+RHINDPYVQ+AQLEGWRARSAYKL+QINE
Sbjct: 16 MVKLLGGSSRRGLIQKVKNNSCQESSHRWLSRHINDPYVQQAQLEGWRARSAYKLIQINE 75
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
KH+IL +RRIVDLGS+PGSWSQVAAR+T + +N+ R+VAIDILDMEPILGVKFFKFDFL
Sbjct: 76 KHRILHPSRRIVDLGSAPGSWSQVAARMTAAKSNDIRIVAIDILDMEPILGVKFFKFDFL 135
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
DL+SWEFI QAIGGNPDLVLSDMAYPTIGHRK DHLRTMSLCEAATFFALEMLN GGDFL
Sbjct: 136 DLESWEFIHQAIGGNPDLVLSDMAYPTIGHRKTDHLRTMSLCEAATFFALEMLNEGGDFL 195
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
VKTFQGGTT DILCLLKK+FQKVIH+KP+ASRAESVEMFLLAKGF+K
Sbjct: 196 VKTFQGGTTQDILCLLKKNFQKVIHIKPMASRAESVEMFLLAKGFKK 242
>gi|148558273|ref|YP_001257653.1| putative ribosomal RNA large subunit methyltransferase J [Brucella
ovis ATCC 25840]
gi|148369558|gb|ABQ62430.1| putative ribosomal RNA large subunit methyltransferase J [Brucella
ovis ATCC 25840]
Length = 215
Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 113/214 (52%), Positives = 160/214 (74%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++IN+++ +L+ ++I+
Sbjct: 1 MRVKKKAGTTKESSRRWLERHLNDPYVHKSRQDGYRSRAAYKLIEINDRYNLLKKGQKII 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQ+AARI GS N +VV ID L ++P+ GV + DFLD ++ + + A+
Sbjct: 61 DLGAAPGGWSQIAARIVGSTDENPQVVGIDYLHVDPLPGVILLEMDFLDDEAPQKLMDAL 120
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G PDLV+SDMA PT GHR+ DHLRT+ LCE A FA+ +L GG FL KTFQGGT N++
Sbjct: 121 GDKPDLVISDMAAPTTGHRRTDHLRTVHLCEVAADFAVSVLKPGGHFLTKTFQGGTENEL 180
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L LLK+ F+ V HVKP ASRAESVE++LLA+ F+
Sbjct: 181 LALLKQKFRSVHHVKPPASRAESVELYLLARDFK 214
>gi|154244787|ref|YP_001415745.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Xanthobacter
autotrophicus Py2]
gi|226705323|sp|A7IDJ5|RLME_XANP2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|154158872|gb|ABS66088.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Xanthobacter
autotrophicus Py2]
Length = 254
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 112/227 (49%), Positives = 150/227 (66%), Gaps = 1/227 (0%)
Query: 1 MVKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M PP R L +VK R SS+ WL R +NDPYV RA+ EGWR+R+A+KL++++
Sbjct: 1 MTTPPRGPDGRPLKVRVKKSRGRTTSSQKWLQRQLNDPYVARAKREGWRSRAAFKLIEMD 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
EK ++L+ RIVDLG++PG WSQVAA+ G ++VAID+L++EPI GV F + DF
Sbjct: 61 EKARLLKRGMRIVDLGAAPGGWSQVAAKKIGLEEGLGKIVAIDLLEIEPIPGVAFAQMDF 120
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
L D+ E + +GG DLV+SDMA GH+K DHLR + L E A FA ++L GG F
Sbjct: 121 LAPDAPERLIAMLGGQADLVMSDMAANATGHKKTDHLRIVGLVELAVEFARQVLAPGGTF 180
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L K QGG +L LK+ F +V HVKP ASRA+S E+++LA GFR
Sbjct: 181 LAKVIQGGMEATLLADLKRDFTQVRHVKPAASRADSAELYVLATGFR 227
>gi|23500428|ref|NP_699868.1| ribosomal RNA large subunit methyltransferase J [Brucella suis
1330]
gi|62317468|ref|YP_223321.1| ribosomal RNA large subunit methyltransferase J [Brucella abortus
bv. 1 str. 9-941]
gi|83269449|ref|YP_418740.1| cell division protein FtsJ [Brucella melitensis biovar Abortus
2308]
gi|256015456|ref|YP_003105465.1| ribosomal RNA large subunit methyltransferase J [Brucella microti
CCM 4915]
gi|260167472|ref|ZP_05754283.1| Ribosomal RNA large subunit methyltransferase J [Brucella sp.
F5/99]
gi|23464051|gb|AAN33873.1| ribosomal RNA large subunit methyltransferase J, putative [Brucella
suis 1330]
gi|62197661|gb|AAX75960.1| hypothetical ribosomal RNA large subunit methyltransferase J
[Brucella abortus bv. 1 str. 9-941]
gi|82939723|emb|CAJ12720.1| Cell division protein FtsJ [Brucella melitensis biovar Abortus
2308]
gi|255998116|gb|ACU49803.1| ribosomal RNA large subunit methyltransferase J [Brucella microti
CCM 4915]
Length = 215
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 113/214 (52%), Positives = 160/214 (74%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++IN+++ +L+ ++I+
Sbjct: 1 MRVKKKAGTIKESSRRWLERHLNDPYVHKSRQDGYRSRAAYKLIEINDRYNLLKKGQKII 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQ+AARI GS N +VV ID L ++P+ GV + DFLD ++ + + A+
Sbjct: 61 DLGAAPGGWSQIAARIVGSTDENPQVVGIDYLHVDPLPGVILLEMDFLDDEAPQKLMDAL 120
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G PDLV+SDMA PT GHR+ DHLRT+ LCE A FA+ +L GG FL KTFQGGT N++
Sbjct: 121 GDKPDLVISDMAAPTTGHRRTDHLRTVHLCEVAADFAVSVLKPGGHFLTKTFQGGTENEL 180
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L LLK+ F+ V HVKP ASRAESVE++LLA+ F+
Sbjct: 181 LALLKQKFRSVHHVKPPASRAESVELYLLARDFK 214
>gi|189044091|sp|A5VUZ8|RLME_BRUO2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
Length = 240
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 114/217 (52%), Positives = 162/217 (74%), Gaps = 2/217 (0%)
Query: 12 GLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
L +VK + + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++IN+++ +L+ +
Sbjct: 23 NLHVRVKKKAGTTKESSRRWLERHLNDPYVHKSRQDGYRSRAAYKLIEINDRYNLLKKGQ 82
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
+I+DLG++PG WSQ+AARI GS N +VV ID L ++P+ GV + DFLD ++ + +
Sbjct: 83 KIIDLGAAPGGWSQIAARIVGSTDENPQVVGIDYLHVDPLPGVILLEMDFLDDEAPQKLM 142
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
A+G PDLV+SDMA PT GHR+ DHLRT+ LCE A FA+ +L GG FL KTFQGGT
Sbjct: 143 DALGDKPDLVISDMAAPTTGHRRTDHLRTVHLCEVAADFAVSVLKPGGHFLTKTFQGGTE 202
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
N++L LLK+ F+ V HVKP ASRAESVE++LLA+ F+
Sbjct: 203 NELLALLKQKFRSVHHVKPPASRAESVELYLLARDFK 239
>gi|298290958|ref|YP_003692897.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Starkeya novella DSM
506]
gi|296927469|gb|ADH88278.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Starkeya novella DSM
506]
Length = 236
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 107/225 (47%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
+P R L ++K RS SS+ WL R +NDPYV RA+ EGWR+R+A+KLL+I++K
Sbjct: 6 QPRKGGEARPLKVRLKKARSLSSSSQKWLQRQLNDPYVARAKREGWRSRAAFKLLEIDDK 65
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLD 121
++L+ R+VDLG++PG WSQVAA+ + +VVAID+L+++PI V F + DFL
Sbjct: 66 LKLLKPGLRVVDLGAAPGGWSQVAAQRVKATEGRGKVVAIDLLEIDPIPAVDFAQLDFLK 125
Query: 122 LDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV 181
++ + +++ +GG D+VLSDMA T GHR DHLR + L E A FA ++L+ GG F+
Sbjct: 126 DEAPDRLKEMLGGEADVVLSDMAANTTGHRATDHLRIVGLVELAIDFARQVLSPGGAFVA 185
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K FQGGT N +L LK+ F V H+KP ASRA+S E++++A GFR
Sbjct: 186 KVFQGGTENTLLAELKRDFTTVRHIKPQASRADSAELYVVATGFR 230
>gi|17988942|ref|NP_541575.1| 23S ribsomal RNA methyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|161620740|ref|YP_001594626.1| ribosomal RNA large subunit methyltransferase J [Brucella canis
ATCC 23365]
gi|163844815|ref|YP_001622470.1| hypothetical protein BSUIS_B0670 [Brucella suis ATCC 23445]
gi|189022722|ref|YP_001932463.1| 23S ribsomal RNA methyltransferase [Brucella abortus S19]
gi|225629167|ref|ZP_03787200.1| Ribosomal RNA large subunit methyltransferase J [Brucella ceti str.
Cudo]
gi|225686460|ref|YP_002734432.1| Ribosomal RNA large subunit methyltransferase J [Brucella
melitensis ATCC 23457]
gi|237817019|ref|ZP_04596011.1| Ribosomal RNA large subunit methyltransferase J [Brucella abortus
str. 2308 A]
gi|254690965|ref|ZP_05154219.1| Ribosomal RNA large subunit methyltransferase J [Brucella abortus
bv. 6 str. 870]
gi|254695724|ref|ZP_05157552.1| Ribosomal RNA large subunit methyltransferase J [Brucella abortus
bv. 3 str. Tulya]
gi|254698749|ref|ZP_05160577.1| Ribosomal RNA large subunit methyltransferase J [Brucella abortus
bv. 2 str. 86/8/59]
gi|254699910|ref|ZP_05161738.1| Ribosomal RNA large subunit methyltransferase J [Brucella suis bv.
5 str. 513]
gi|254703032|ref|ZP_05164860.1| Ribosomal RNA large subunit methyltransferase J [Brucella suis bv.
3 str. 686]
gi|254711054|ref|ZP_05172865.1| Ribosomal RNA large subunit methyltransferase J [Brucella
pinnipedialis B2/94]
gi|254732193|ref|ZP_05190771.1| Ribosomal RNA large subunit methyltransferase J [Brucella abortus
bv. 4 str. 292]
gi|256029435|ref|ZP_05443049.1| Ribosomal RNA large subunit methyltransferase J [Brucella
pinnipedialis M292/94/1]
gi|256043568|ref|ZP_05446495.1| Ribosomal RNA large subunit methyltransferase J [Brucella
melitensis bv. 1 str. Rev.1]
gi|256111394|ref|ZP_05452420.1| Ribosomal RNA large subunit methyltransferase J [Brucella
melitensis bv. 3 str. Ether]
gi|256157632|ref|ZP_05455550.1| Ribosomal RNA large subunit methyltransferase J [Brucella ceti
M490/95/1]
gi|256253393|ref|ZP_05458929.1| Ribosomal RNA large subunit methyltransferase J [Brucella ceti
B1/94]
gi|256256150|ref|ZP_05461686.1| Ribosomal RNA large subunit methyltransferase J [Brucella abortus
bv. 9 str. C68]
gi|256262400|ref|ZP_05464932.1| ribosomal RNA large subunit methyltransferase J [Brucella
melitensis bv. 2 str. 63/9]
gi|260544705|ref|ZP_05820526.1| ribosomal RNA large subunit methyltransferase J [Brucella abortus
NCTC 8038]
gi|260564762|ref|ZP_05835247.1| ribosomal RNA large subunit methyltransferase J [Brucella
melitensis bv. 1 str. 16M]
gi|260568039|ref|ZP_05838508.1| ribosomal RNA large subunit methyltransferase J [Brucella suis bv.
4 str. 40]
gi|260756558|ref|ZP_05868906.1| 23S rRNA methyltransferase [Brucella abortus bv. 6 str. 870]
gi|260759989|ref|ZP_05872337.1| 23S rRNA methyltransferase [Brucella abortus bv. 4 str. 292]
gi|260763229|ref|ZP_05875561.1| 23S rRNA methyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260882376|ref|ZP_05893990.1| ribosomal RNA large subunit methyltransferase J [Brucella abortus
bv. 9 str. C68]
gi|261216133|ref|ZP_05930414.1| 23S rRNA methyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|261220515|ref|ZP_05934796.1| ribosomal RNA large subunit methyltransferase J [Brucella ceti
B1/94]
gi|261318645|ref|ZP_05957842.1| ribosomal RNA large subunit methyltransferase J [Brucella
pinnipedialis B2/94]
gi|261750386|ref|ZP_05994095.1| ribosomal RNA large subunit methyltransferase J [Brucella suis bv.
5 str. 513]
gi|261753643|ref|ZP_05997352.1| ribosomal RNA large subunit methyltransferase J [Brucella suis bv.
3 str. 686]
gi|261756885|ref|ZP_06000594.1| ribosomal RNA large subunit methyltransferase J [Brucella sp.
F5/99]
gi|265986444|ref|ZP_06099001.1| ribosomal RNA large subunit methyltransferase J [Brucella
pinnipedialis M292/94/1]
gi|265989986|ref|ZP_06102543.1| ribosomal RNA large subunit methyltransferase J [Brucella
melitensis bv. 1 str. Rev.1]
gi|265992903|ref|ZP_06105460.1| ribosomal RNA large subunit methyltransferase J [Brucella
melitensis bv. 3 str. Ether]
gi|265996137|ref|ZP_06108694.1| ribosomal RNA large subunit methyltransferase J [Brucella ceti
M490/95/1]
gi|294853531|ref|ZP_06794203.1| cell division protein methyltransferase FtsJ [Brucella sp. NVSL
07-0026]
gi|297249509|ref|ZP_06933210.1| cell division protein methyltransferase FtsJ [Brucella abortus bv.
5 str. B3196]
gi|306840657|ref|ZP_07473408.1| Ribosomal RNA large subunit methyltransferase J [Brucella sp. BO2]
gi|306845790|ref|ZP_07478358.1| Ribosomal RNA large subunit methyltransferase J [Brucella sp. BO1]
gi|81850447|sp|Q8YCD5|RLME_BRUME RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83305655|sp|Q578H4|RLME_BRUAB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83305656|sp|Q8FVY1|RLME_BRUSU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|143459528|sp|Q2YKU4|RLME_BRUA2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189044087|sp|A9MBW8|RLME_BRUC2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189044088|sp|A9WYY2|RLME_BRUSI RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703283|sp|B2SAY0|RLME_BRUA1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809548|sp|C0RLJ5|RLME_BRUMB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|17984775|gb|AAL53839.1| 23S ribsomal RNA methyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|161337551|gb|ABX63855.1| Ribosomal RNA large subunit methyltransferase J [Brucella canis
ATCC 23365]
gi|163675538|gb|ABY39648.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021296|gb|ACD74017.1| 23S ribsomal RNA methyltransferase [Brucella abortus S19]
gi|225615663|gb|EEH12712.1| Ribosomal RNA large subunit methyltransferase J [Brucella ceti str.
Cudo]
gi|225642565|gb|ACO02478.1| Ribosomal RNA large subunit methyltransferase J [Brucella
melitensis ATCC 23457]
gi|237787832|gb|EEP62048.1| Ribosomal RNA large subunit methyltransferase J [Brucella abortus
str. 2308 A]
gi|260097976|gb|EEW81850.1| ribosomal RNA large subunit methyltransferase J [Brucella abortus
NCTC 8038]
gi|260152405|gb|EEW87498.1| ribosomal RNA large subunit methyltransferase J [Brucella
melitensis bv. 1 str. 16M]
gi|260154704|gb|EEW89785.1| ribosomal RNA large subunit methyltransferase J [Brucella suis bv.
4 str. 40]
gi|260670307|gb|EEX57247.1| 23S rRNA methyltransferase [Brucella abortus bv. 4 str. 292]
gi|260673650|gb|EEX60471.1| 23S rRNA methyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676666|gb|EEX63487.1| 23S rRNA methyltransferase [Brucella abortus bv. 6 str. 870]
gi|260871904|gb|EEX78973.1| ribosomal RNA large subunit methyltransferase J [Brucella abortus
bv. 9 str. C68]
gi|260917740|gb|EEX84601.1| 23S rRNA methyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|260919099|gb|EEX85752.1| ribosomal RNA large subunit methyltransferase J [Brucella ceti
B1/94]
gi|261297868|gb|EEY01365.1| ribosomal RNA large subunit methyltransferase J [Brucella
pinnipedialis B2/94]
gi|261736869|gb|EEY24865.1| ribosomal RNA large subunit methyltransferase J [Brucella sp.
F5/99]
gi|261740139|gb|EEY28065.1| ribosomal RNA large subunit methyltransferase J [Brucella suis bv.
5 str. 513]
gi|261743396|gb|EEY31322.1| ribosomal RNA large subunit methyltransferase J [Brucella suis bv.
3 str. 686]
gi|262550434|gb|EEZ06595.1| ribosomal RNA large subunit methyltransferase J [Brucella ceti
M490/95/1]
gi|262763773|gb|EEZ09805.1| ribosomal RNA large subunit methyltransferase J [Brucella
melitensis bv. 3 str. Ether]
gi|263000655|gb|EEZ13345.1| ribosomal RNA large subunit methyltransferase J [Brucella
melitensis bv. 1 str. Rev.1]
gi|263092133|gb|EEZ16430.1| ribosomal RNA large subunit methyltransferase J [Brucella
melitensis bv. 2 str. 63/9]
gi|264658641|gb|EEZ28902.1| ribosomal RNA large subunit methyltransferase J [Brucella
pinnipedialis M292/94/1]
gi|294819186|gb|EFG36186.1| cell division protein methyltransferase FtsJ [Brucella sp. NVSL
07-0026]
gi|297173378|gb|EFH32742.1| cell division protein methyltransferase FtsJ [Brucella abortus bv.
5 str. B3196]
gi|306273682|gb|EFM55520.1| Ribosomal RNA large subunit methyltransferase J [Brucella sp. BO1]
gi|306289350|gb|EFM60589.1| Ribosomal RNA large subunit methyltransferase J [Brucella sp. BO2]
gi|326410838|gb|ADZ67902.1| 23S ribsomal RNA methyltransferase [Brucella melitensis M28]
gi|326554129|gb|ADZ88768.1| 23S ribsomal RNA methyltransferase [Brucella melitensis M5-90]
Length = 240
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 114/217 (52%), Positives = 162/217 (74%), Gaps = 2/217 (0%)
Query: 12 GLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
L +VK + + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++IN+++ +L+ +
Sbjct: 23 NLHVRVKKKAGTIKESSRRWLERHLNDPYVHKSRQDGYRSRAAYKLIEINDRYNLLKKGQ 82
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
+I+DLG++PG WSQ+AARI GS N +VV ID L ++P+ GV + DFLD ++ + +
Sbjct: 83 KIIDLGAAPGGWSQIAARIVGSTDENPQVVGIDYLHVDPLPGVILLEMDFLDDEAPQKLM 142
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
A+G PDLV+SDMA PT GHR+ DHLRT+ LCE A FA+ +L GG FL KTFQGGT
Sbjct: 143 DALGDKPDLVISDMAAPTTGHRRTDHLRTVHLCEVAADFAVSVLKPGGHFLTKTFQGGTE 202
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
N++L LLK+ F+ V HVKP ASRAESVE++LLA+ F+
Sbjct: 203 NELLALLKQKFRSVHHVKPPASRAESVELYLLARDFK 239
>gi|254712483|ref|ZP_05174294.1| Ribosomal RNA large subunit methyltransferase J [Brucella ceti
M644/93/1]
gi|254715556|ref|ZP_05177367.1| Ribosomal RNA large subunit methyltransferase J [Brucella ceti
M13/05/1]
gi|261217293|ref|ZP_05931574.1| ribosomal RNA large subunit methyltransferase J [Brucella ceti
M13/05/1]
gi|261320164|ref|ZP_05959361.1| ribosomal RNA large subunit methyltransferase J [Brucella ceti
M644/93/1]
gi|260922382|gb|EEX88950.1| ribosomal RNA large subunit methyltransferase J [Brucella ceti
M13/05/1]
gi|261292854|gb|EEX96350.1| ribosomal RNA large subunit methyltransferase J [Brucella ceti
M644/93/1]
Length = 240
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 112/217 (51%), Positives = 161/217 (74%), Gaps = 2/217 (0%)
Query: 12 GLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
L +VK + + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++IN+++ +L+ +
Sbjct: 23 NLHVRVKKKAGTIKESSRRWLERHLNDPYVHKSRQDGYRSRAAYKLIEINDRYNLLKKGQ 82
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
+I+DLG++PG WSQ+AARI GS N +VV ID L ++P+ GV + DFLD ++ + +
Sbjct: 83 KIIDLGAAPGGWSQIAARIVGSTDENPQVVGIDYLHVDPLPGVILLEMDFLDDEAPQKLM 142
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
A+G PDLV+SDMA PT GHR+ DHLRT+ +CE FA+ +L GG FL KTFQGGT
Sbjct: 143 DALGDKPDLVISDMAAPTTGHRRTDHLRTVHVCEVVADFAVSVLKPGGHFLTKTFQGGTE 202
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
N++L LLK+ F+ V HVKP ASRAESVE++LLA+ F+
Sbjct: 203 NELLALLKQKFRSVHHVKPPASRAESVELYLLARDFK 239
>gi|256059126|ref|ZP_05449335.1| Ribosomal RNA large subunit methyltransferase J [Brucella neotomae
5K33]
gi|261323077|ref|ZP_05962274.1| ribosomal RNA large subunit methyltransferase J [Brucella neotomae
5K33]
gi|261299057|gb|EEY02554.1| ribosomal RNA large subunit methyltransferase J [Brucella neotomae
5K33]
Length = 240
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 114/217 (52%), Positives = 162/217 (74%), Gaps = 2/217 (0%)
Query: 12 GLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
L +VK + + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++IN+++ +L+ +
Sbjct: 23 NLHVRVKKKAGTIKESSRRWLERHLNDPYVHKSRQDGYRSRAAYKLIEINDRYNLLKKGQ 82
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
+I+DLG++PG WSQ+AARI GS N +VV ID L ++P+ GV + DFLD ++ + +
Sbjct: 83 KIIDLGAAPGGWSQIAARIVGSTDENPQVVGIDYLHVDPLPGVILLEMDFLDDEAPQKLM 142
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
A+G PDLV+SDMA PT GHR+ DHLRT+ LCE A FA+ +L GG FL KTFQGGT
Sbjct: 143 DALGDKPDLVISDMAAPTAGHRRTDHLRTVHLCEVAADFAVSVLKPGGHFLTKTFQGGTE 202
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
N++L LLK+ F+ V HVKP ASRAESVE++LLA+ F+
Sbjct: 203 NELLALLKQKFRSVHHVKPPASRAESVELYLLARDFK 239
>gi|83312878|ref|YP_423142.1| 23S rRNA methylase [Magnetospirillum magneticum AMB-1]
gi|123540815|sp|Q2W0P2|RLME_MAGSA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|82947719|dbj|BAE52583.1| 23S rRNA methylase [Magnetospirillum magneticum AMB-1]
Length = 244
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 102/223 (45%), Positives = 142/223 (63%), Gaps = 3/223 (1%)
Query: 7 SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
+ R LT KVK + + SS WL R +NDPYV A+ G+R+R+A+K++Q++E+ IL
Sbjct: 18 AGGSRNLTVKVKTAKRRKLSSTLWLQRQLNDPYVHEAKRLGYRSRAAFKMIQLDERFHIL 77
Query: 66 QSNRRIVDLGSSPGSWSQVAARITG--SNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
+ R+VDLG++PG W+QVA G +VV +DIL+ +P+ G + DFL D
Sbjct: 78 KPGLRVVDLGAAPGGWTQVAVEKVGALKPKGGGKVVGMDILEWDPLPGAITLQGDFLADD 137
Query: 124 SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ + +++A+GG D+VLSDMA PT GH DHLR + L E A FALE+L GG F+ K
Sbjct: 138 APDRLKEALGGPADVVLSDMAAPTTGHPSTDHLRIIGLVEVALHFALEVLTPGGTFVAKV 197
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FQGGT +L LKK+F V H KP ASR S E +++A GFR
Sbjct: 198 FQGGTEKTLLDQLKKNFTTVRHAKPPASRQGSAETYVVATGFR 240
>gi|153011133|ref|YP_001372347.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ochrobactrum anthropi
ATCC 49188]
gi|189040317|sp|A6X5L4|RLME_OCHA4 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|151563021|gb|ABS16518.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ochrobactrum anthropi
ATCC 49188]
Length = 240
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 113/221 (51%), Positives = 162/221 (73%), Gaps = 2/221 (0%)
Query: 8 SSRRGLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
+ L +VK + + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++IN+++ +L
Sbjct: 19 AGSSNLQVRVKKKAGTIKESSRRWLQRHLNDPYVHKSRQDGYRSRAAYKLIEINDRYDLL 78
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ ++I+DLG++PG WSQ+AA+I GS N VV ID L ++P+ GV + DFLD ++
Sbjct: 79 KKGQKIIDLGAAPGGWSQIAAKIVGSTDENPHVVGIDYLHVDPLPGVVLLEMDFLDDEAP 138
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
+ + A+G PDLV+SDMA PT GHR+ DHLRT+ LCE A FA+ +L GG FL KTFQ
Sbjct: 139 QKLMDALGDKPDLVISDMAAPTTGHRRTDHLRTVHLCEVAADFAISVLKPGGHFLTKTFQ 198
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GGT N++L LLK+ F+ V HVKP ASRAESVE++LLA+ F+
Sbjct: 199 GGTENELLALLKQKFRSVHHVKPPASRAESVELYLLARDFK 239
>gi|52355215|gb|AAU44782.1| FtsJ [Bartonella vinsonii subsp. arupensis]
Length = 240
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 115/223 (51%), Positives = 158/223 (70%), Gaps = 2/223 (0%)
Query: 6 GSSSRRGLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
G S L Q+VK + + + SSR WL RH+NDPYV +++++G+R+R+AYKL++INE+++
Sbjct: 13 GGSGSHELYQRVKKKAGTIKASSRRWLERHLNDPYVHQSKVDGYRSRAAYKLIEINERYK 72
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
L+ ++I+DLG++PG W QVA R+ GSN VV ID L + P+ GV K DFL D
Sbjct: 73 FLKKGQKIIDLGAAPGGWCQVAVRVVGSNDQKPSVVGIDYLHVNPLPGVVMLKMDFLHAD 132
Query: 124 SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ + + A+G PD+VLSDMA PT GHR+ DHLRT+ LCE A FAL +L GG FL K
Sbjct: 133 APQKLIDALGEKPDVVLSDMAAPTTGHRQTDHLRTVYLCEVAADFALSVLKPGGHFLAKA 192
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FQGG N +L LK++F+ V HVKP ASR+ESVE++LLA GF+
Sbjct: 193 FQGGAENTLLTTLKQNFKTVHHVKPPASRSESVELYLLALGFK 235
>gi|148255007|ref|YP_001239592.1| ribosomal RNA large subunit (23S) methyltransferase [Bradyrhizobium
sp. BTAi1]
gi|158513280|sp|A5EHP2|RLME_BRASB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|146407180|gb|ABQ35686.1| 23S rRNA Um-2552 2'-O-methyltransferase [Bradyrhizobium sp. BTAi1]
Length = 231
Score = 218 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 102/227 (44%), Positives = 145/227 (63%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K + +VK + SS+ WL R +NDPYV +A+ +G+R+R+ YKL++I+
Sbjct: 1 MAKDTTGR----MHVQVKTGGKRKLSSKLWLERQLNDPYVAQAKRDGYRSRATYKLIEID 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K+ +L+ +VDLG++PG WSQ+AAR G+ A +V+AID+L+M + GV F + DF
Sbjct: 57 DKYHLLKPGMTVVDLGAAPGGWSQIAARRVGAEAGKGKVIAIDLLEMGEVPGVTFTQMDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
D+ E +R +GG D+V+SDMA T GHRK D LR + L E A FA E+L GG F
Sbjct: 117 HAQDAPEKLRAMLGGRADVVMSDMAANTTGHRKTDQLRIVGLVELAAHFAGEVLKPGGSF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L KTFQ G ++L LK+ + V HVKP ASR +S E ++LA GFR
Sbjct: 177 LAKTFQSGADAELLAQLKRDYATVRHVKPAASRQDSSERYVLAMGFR 223
>gi|158424996|ref|YP_001526288.1| 23S rRNA methylase [Azorhizobium caulinodans ORS 571]
gi|189044085|sp|A8II77|RLME_AZOC5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|158331885|dbj|BAF89370.1| 23S rRNA methylase [Azorhizobium caulinodans ORS 571]
Length = 240
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 154/227 (67%), Gaps = 1/227 (0%)
Query: 1 MVKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M P S R L +VK+ R+ SS+ WL R +NDPYV RA+ EGWR+R+A+KL++++
Sbjct: 1 MSSSPRSPDARPLKVRVKSARTRSSSSQKWLQRQLNDPYVARAKREGWRSRAAFKLIEMD 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
EK +L+ RIVDLG++PG WSQVAA+ G+ ++VAID+L+M+ + GV F + DF
Sbjct: 61 EKLHVLKRGMRIVDLGAAPGGWSQVAAKKIGAAEGQGKIVAIDLLEMDAVTGVMFAQMDF 120
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
LD + E + + G DLV+SDMA T GH+K DHL+ ++L E A FA ++L GG F
Sbjct: 121 LDPTAPERLFAMLDGKADLVMSDMAANTTGHKKTDHLKIIALVELAADFARQVLAPGGAF 180
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K FQGGT +L LK+ + +V H+KP ASRA+S E++L+A GFR
Sbjct: 181 IAKVFQGGTEGTLLADLKRDYAQVRHLKPAASRADSAELYLVATGFR 227
>gi|91976736|ref|YP_569395.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris BisB5]
gi|123762792|sp|Q138J5|RLME_RHOPS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91683192|gb|ABE39494.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris BisB5]
Length = 235
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 101/227 (44%), Positives = 145/227 (63%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSC-QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K + VK+ + SS+ WL R +NDPYV +A+ +G+R+R+AYKLL+I+
Sbjct: 1 MAKDTTGR----MRVTVKSAGRMKLSSKLWLERQLNDPYVAQAKRDGYRSRAAYKLLEID 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K+ L+S + DLG++PG WSQ+AA+ G+ +V+AID+L+M I GV F + DF
Sbjct: 57 DKYHFLKSGLAVADLGAAPGGWSQIAAKRVGAPDGRGKVIAIDLLEMGEIPGVTFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
LD + + +R+ +GG D+V+SDMA T GHRK D LR + L E+A FA E+L GG F
Sbjct: 117 LDDAAPDRLREMLGGGADVVMSDMAANTTGHRKTDQLRIVGLVESAAQFASEVLKPGGTF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K FQ G ++ LK+ F V HVKP ASR +S E ++LA GFR
Sbjct: 177 VAKVFQSGADATLMTQLKRDFATVKHVKPAASRKDSSERYVLAMGFR 223
>gi|146340136|ref|YP_001205184.1| ribosomal RNA large subunit (23S) methyltransferase [Bradyrhizobium
sp. ORS278]
gi|158514219|sp|A4YSS3|RLME_BRASO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|146192942|emb|CAL76949.1| Ribosomal RNA large subunit (23S) methyltransferase [Bradyrhizobium
sp. ORS278]
Length = 231
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 105/227 (46%), Positives = 145/227 (63%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K + +VK + SS+ WL R +NDPYV +A+ +G+R+R+ YKL++I+
Sbjct: 1 MAKDTTGR----MHVQVKTGGKRKLSSKLWLERQLNDPYVAQAKRDGYRSRATYKLIEID 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K+ +L+ +VDLG++PG WSQ+AAR G+ A +VVAID+L+M I GV F + DF
Sbjct: 57 DKYHMLKPGMTVVDLGAAPGGWSQIAARRVGAEAGKGKVVAIDLLEMGEIPGVTFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
D+ E +R IGG D+V+SDMA T GHRK D LR + L E A FA E+L GG F
Sbjct: 117 HAQDAPEKLRTMIGGRADVVMSDMAANTTGHRKTDQLRIVGLVELAAHFAGEVLKPGGSF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L KTFQ G ++L LK+ + V HVKP ASR +S E ++LA GFR
Sbjct: 177 LAKTFQSGADAELLAQLKRDYATVRHVKPAASRQDSSERYVLAMGFR 223
>gi|144900076|emb|CAM76940.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Magnetospirillum
gryphiswaldense MSR-1]
Length = 238
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 101/217 (46%), Positives = 144/217 (66%), Gaps = 4/217 (1%)
Query: 11 RGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
R L ++VK R + SS WL R +NDPYVQ A+ G+R+R+A+KL++++++ +L+
Sbjct: 19 RMLVERVKTARGRKPSSTRWLQRQLNDPYVQEARKLGYRSRAAFKLIELDDRFHLLKPGL 78
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
R+VDLG++PG W+QVA + G+ +VV +DIL+ +P+ G DFL DS + ++
Sbjct: 79 RVVDLGAAPGGWTQVAVQRVGA---RGKVVGMDILEYDPVPGAICMLGDFLADDSPDRLK 135
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
+A+ G DLV+SDMA PT GH DHLR + L E A FALE+L GG F+ K FQGGT
Sbjct: 136 EALDGLADLVVSDMAAPTTGHPPTDHLRIIGLVEVALHFALEVLAPGGTFIAKVFQGGTE 195
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L LLKK+F V H KP ASR ES E +++A GF+
Sbjct: 196 KSLLDLLKKNFTTVRHAKPPASRKESAETYVIATGFK 232
>gi|115525274|ref|YP_782185.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris BisA53]
gi|122295646|sp|Q07LH9|RLME_RHOP5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|115519221|gb|ABJ07205.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris BisA53]
Length = 235
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 101/227 (44%), Positives = 142/227 (62%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSC-QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K + VK+ + SS+ WL R +NDPYV +A+ +G+R+R+AYKLL+I+
Sbjct: 1 MAKDSTGR----MRVTVKSAGRMKLSSKLWLERQLNDPYVAQAKRDGYRSRAAYKLLEID 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+KH L+ +VDLG++PG WSQ+AA+ G+ +VVAID+L+M I+GV F + DF
Sbjct: 57 DKHHFLKPGASVVDLGAAPGGWSQIAAKRVGATEGKGKVVAIDLLEMPEIVGVTFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
L + E + IGG D+V+SDMA T GHRK D LR + L E A FA ++L GG F
Sbjct: 117 LSPAAPEKLLAMIGGRVDVVMSDMAANTTGHRKTDQLRIVGLVEDAAAFACDVLKPGGTF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K FQ G ++ LK+ F V H+KP ASR +S E ++LA GFR
Sbjct: 177 VAKVFQSGADATLMTQLKRDFASVKHLKPQASRKDSSERYVLALGFR 223
>gi|315499641|ref|YP_004088444.1| ribosomal RNA methyltransferase rrmj/ftsj [Asticcacaulis
excentricus CB 48]
gi|315417653|gb|ADU14293.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Asticcacaulis
excentricus CB 48]
Length = 238
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 143/230 (62%), Gaps = 9/230 (3%)
Query: 1 MVKPPGSSSRRGL---TQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLL 56
MVKPP + G VK + SS WL R +NDP+VQ+A+ EGWR+R+A+KL
Sbjct: 13 MVKPPAGGNLSGRAKGHTAVKTAKQRTQSSAKWLERQLNDPFVQKAKAEGWRSRAAFKLQ 72
Query: 57 QINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFK 116
+I+++ IL+ R+VDLG +PG W Q+A + VV +D+L ++PI G +
Sbjct: 73 EIDDRFHILKRGARVVDLGCAPGGWVQMA-----QSRGAAHVVGVDLLPVDPIPGADMIE 127
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF D + + +G PD+VLSD+A+ T+GHR+ DHL+ M L E A+ FAL+ L G
Sbjct: 128 ADFTDPAIPARLMEMMGDKPDVVLSDLAHNTVGHRQTDHLKIMGLLELASDFALDNLKPG 187
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K FQGG T +L LK F+ V H KP +SRA+S E++++A+GF+
Sbjct: 188 GAFVAKAFQGGETEHLLLKLKLAFRDVKHFKPKSSRADSSEIYIVAQGFK 237
>gi|254502176|ref|ZP_05114327.1| ribosomal RNA large subunit methyltransferase J [Labrenzia
alexandrii DFL-11]
gi|222438247|gb|EEE44926.1| ribosomal RNA large subunit methyltransferase J [Labrenzia
alexandrii DFL-11]
Length = 236
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 110/225 (48%), Positives = 154/225 (68%), Gaps = 2/225 (0%)
Query: 4 PPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH 62
S RG+ KVK+ + SS WL+R +NDPYV+RA+++G+R+R+AYKL++I++KH
Sbjct: 5 KKRGSGDRGMHVKVKSAAGRRESSTRWLSRQLNDPYVRRAKIDGYRSRAAYKLIEIDDKH 64
Query: 63 QILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDL 122
++L+ R+VDLG +PG W Q+A S ++ +VV ID LDM+ + G F K DFLD
Sbjct: 65 KLLKPGYRVVDLGCAPGGWCQIAVDRVKSTIDSPKVVGIDYLDMDHVRGAVFLKKDFLDD 124
Query: 123 DSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV 181
D+ + +A+GG+ PD+VLSDMA PT GH++ DHLRT L E A FA L GG FL
Sbjct: 125 DAPAALMEALGGHKPDVVLSDMAAPTTGHKQTDHLRTTHLFEIAIDFARRNLVPGGSFLA 184
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F+GGT N +L LK+ F+ V H+KP ASR ES E++++AKGFR
Sbjct: 185 KVFRGGTENAMLQELKREFKSVAHLKPPASRKESPELYVIAKGFR 229
>gi|110632831|ref|YP_673039.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Mesorhizobium sp. BNC1]
gi|123162804|sp|Q11L51|RLME_MESSB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|110283815|gb|ABG61874.1| 23S rRNA Um-2552 2'-O-methyltransferase [Chelativorans sp. BNC1]
Length = 235
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 118/228 (51%), Positives = 159/228 (69%), Gaps = 2/228 (0%)
Query: 1 MVK-PPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K S R L +VK + + SSR WL RH+NDPYV+RA EG R+R+AYKL++I
Sbjct: 1 MTKEKKAGSGTRVLKTRVKKKRGLKSSSRRWLERHLNDPYVRRANSEGMRSRAAYKLIEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
++KH IL +++DLG++PG W QVAA S+ VV ID L+M+P+ G + D
Sbjct: 61 DDKHHILAPGMKVIDLGAAPGGWCQVAAASVKSDPAKPSVVGIDYLEMDPVPGAAVLQMD 120
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FLD + + + + +GG+PD+VLSDMA PT GHR+ DHLRTM LCEAA FA+ +L GG+
Sbjct: 121 FLDDAAPDRLIEVLGGSPDVVLSDMAAPTTGHRRTDHLRTMQLCEAAADFAISVLKTGGN 180
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT ++L LLK++F+ V HVKP ASR ESVE+++LAK F+
Sbjct: 181 FLAKTFQGGTEGELLSLLKRNFRSVHHVKPPASRDESVELYILAKDFK 228
>gi|220921508|ref|YP_002496809.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
nodulans ORS 2060]
gi|219946114|gb|ACL56506.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
nodulans ORS 2060]
Length = 255
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 113/231 (48%), Positives = 148/231 (64%), Gaps = 5/231 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M G R L Q+V+ R SS+ WL R +NDPYV RA+ EG+R+R+AYKLL+I+
Sbjct: 1 MSDRRGGGPRGDLKQRVRTARGRTVSSKRWLERQLNDPYVARAKREGYRSRAAYKLLEID 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN----NTRVVAIDILDMEPILGVKFF 115
E+ +L+ R+VDLG++PG WSQVAA GS+ RVV ID+L++EP+ GV F
Sbjct: 61 ERFHLLKPGYRVVDLGAAPGGWSQVAAAKVGSHPGAPKPRGRVVGIDLLEIEPLPGVDFI 120
Query: 116 KFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI 175
DFLD + + + +GG DLV+SDMA GH+K DHLR M L E A FA E+L
Sbjct: 121 TLDFLDATAPARLIELLGGPADLVMSDMAANATGHKKTDHLRIMGLAETAAAFAREVLAP 180
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG +L K QGGT +L LK+ F V HVKP ASRA+S E+++LA GFR
Sbjct: 181 GGAYLAKVLQGGTEGTLLADLKRDFSAVRHVKPAASRADSSELYVLATGFR 231
>gi|323136970|ref|ZP_08072050.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylocystis sp. ATCC
49242]
gi|322397731|gb|EFY00253.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylocystis sp. ATCC
49242]
Length = 242
Score = 215 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K G R L +VK R SS WL R +NDPYV RA+ EG+R+R+AYKL++++++
Sbjct: 6 KISGREGGRSLKTRVKTARKRSLSSTLWLERQLNDPYVARAKREGYRSRAAYKLIEMDDR 65
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLD 121
+ + + RIVDLG++PG WSQVAA + +VV +D+LDMEPI GV F DF D
Sbjct: 66 YHLFKPGGRIVDLGAAPGGWSQVAADRVKAKDGRGKVVGVDLLDMEPITGVTFAVKDFND 125
Query: 122 LDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV 181
D+ +F++ +GG D V+SDMA GH++ DHLR ++L E A FA+++L GG F+
Sbjct: 126 DDAPDFVKAMLGGEADGVMSDMAANATGHKQTDHLRIVALAELAAEFAMDVLAAGGFFVA 185
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K QGGT +L LK+ F V HVKP ASRA+S E+++LA GFR
Sbjct: 186 KVLQGGTEGQLLTRLKRDFATVRHVKPAASRADSAELYVLATGFR 230
>gi|56696734|ref|YP_167095.1| ribosomal RNA large subunit methyltransferase J [Ruegeria pomeroyi
DSS-3]
gi|81349883|sp|Q5LSB0|RLME_SILPO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56678471|gb|AAV95137.1| ribosomal RNA large subunit methyltransferase J [Ruegeria pomeroyi
DSS-3]
Length = 233
Score = 215 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 102/232 (43%), Positives = 149/232 (64%), Gaps = 6/232 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K +R L KVK R + SS WL R +NDPYV+RAQ EG+R R+A+K+L+++
Sbjct: 1 MAKNTSGRGQRDLKVKVKTARGRKLSSTRWLQRQLNDPYVKRAQAEGYRGRAAFKILELD 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKF 114
EK++ L R+VDLG +PG W QVA + S+ RV+ ID+ ++EPI G +
Sbjct: 61 EKYRFLVPGARVVDLGCAPGGWCQVAVKRVNALGERSDKRVGRVLGIDLQEVEPIAGAEI 120
Query: 115 FKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN 174
+ DFLD + + I++ +GG D+V+SDMA + GH++ DH+R ++LCEAA + A ++L
Sbjct: 121 HQLDFLDDGADDRIKEWLGGKADVVMSDMAASSSGHKQTDHMRIIALCEAAAYLAFDVLE 180
Query: 175 IGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG F+ K GG D+ LLK+ F KV +VKP ASR++S E F++A GFR
Sbjct: 181 EGGTFVAKVLAGGAEGDLQKLLKQKFTKVANVKPPASRSDSSEKFVVATGFR 232
>gi|83945237|ref|ZP_00957586.1| Ribosomal RNA large subunit methyltransferase J [Oceanicaulis
alexandrii HTCC2633]
gi|83851407|gb|EAP89263.1| Ribosomal RNA large subunit methyltransferase J [Oceanicaulis
alexandrii HTCC2633]
Length = 253
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 148/226 (65%), Gaps = 6/226 (2%)
Query: 2 VKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
K + S + +VK R + SS+ WL R +NDPYV RA+ EG+R+R+AYKL+++++
Sbjct: 23 TKGGDARSAKQFRTRVKTARGRKYSSKLWLERQLNDPYVARAKQEGYRSRAAYKLIELDD 82
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
K +++ R+ DLG++PG W+QVA + + V +D+L++EPI G + DF
Sbjct: 83 KFGLIKPGMRVADLGAAPGGWTQVALKRGAEH-----VAGVDLLEIEPIAGAILMQLDFT 137
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
+ + + ++ A+GG DLV+SD+A T GH+ DHLR ++L E A +FAL++L GG F+
Sbjct: 138 EEGAEDKLKAALGGPADLVISDLAPWTTGHKSTDHLRIVALVETAAYFALDVLKPGGGFI 197
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K FQGG T ++L LLK F+KV H KP ASR+ES E FLLA GFR
Sbjct: 198 AKVFQGGATGELLDLLKHRFEKVRHYKPPASRSESAETFLLATGFR 243
>gi|126729852|ref|ZP_01745665.1| ribosomal RNA large subunit methyltransferase J [Sagittula stellata
E-37]
gi|126709971|gb|EBA09024.1| ribosomal RNA large subunit methyltransferase J [Sagittula stellata
E-37]
Length = 236
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 100/235 (42%), Positives = 146/235 (62%), Gaps = 9/235 (3%)
Query: 1 MVKPPGSSSRRG---LTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLL 56
M K P +SS RG L KVK R + SS WL R +NDPYV+RA+ EG+R R+A+K+L
Sbjct: 1 MAKGPKNSSGRGQRDLKVKVKTARGRKLSSTLWLQRQLNDPYVKRAKEEGYRGRAAFKIL 60
Query: 57 QINEKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILG 111
+I+EK++ L R+VDLG +PG W QVAAR V+ ID+ +++ I G
Sbjct: 61 EIDEKYRFLVPGARVVDLGCAPGGWCQVAARRVNSLGEKPGKAQGFVLGIDLQEVDAIAG 120
Query: 112 VKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
V+ + DFL+ + + ++ +GG+ +V+SDMA + GH++ DHLR ++LCEAA A +
Sbjct: 121 VELHQLDFLEDGADDKVKGWLGGSAHVVMSDMAAASSGHKQTDHLRIITLCEAAAELAFD 180
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L GG F+ K GG + LK+ F KV + KP ASR++S E F++A GFR
Sbjct: 181 VLEEGGTFVAKVLAGGAEGTLQATLKRRFAKVANFKPPASRSDSSEKFVVATGFR 235
>gi|163867451|ref|YP_001608650.1| cell division protein ftsJ [Bartonella tribocorum CIP 105476]
gi|189044086|sp|A9IMA1|RLME_BART1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|161017097|emb|CAK00655.1| cell division protein ftsJ [Bartonella tribocorum CIP 105476]
Length = 242
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 115/231 (49%), Positives = 162/231 (70%), Gaps = 6/231 (2%)
Query: 2 VKPP----GSSSRRGLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKL 55
KPP G S L Q+VK + + + SSR WL RH+NDPYV +++++G+R+R+AYKL
Sbjct: 5 TKPPTGGYGGSGSHELYQRVKKKAGTIKASSRRWLERHLNDPYVHQSKVDGYRSRAAYKL 64
Query: 56 LQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFF 115
++INE+++ L+ ++++DLG++PG W QVA RI GS+ VV ID L ++P+ V
Sbjct: 65 IEINERYKFLKKGQKVIDLGAAPGGWCQVAERIVGSSNEKPSVVGIDYLHVDPLPRVAML 124
Query: 116 KFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI 175
+ DFL D+ + + + +G PD+VLSDMA PT GHR+ DHLRT+ LCE A FAL +L
Sbjct: 125 EMDFLHADAPQKLIETLGTKPDVVLSDMAAPTTGHRQTDHLRTIYLCEVAADFALSVLKP 184
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG FL K FQGG N +L +LK+HF+KV HVKP ASR+ESVE++LLA F+
Sbjct: 185 GGHFLAKAFQGGAENTLLAILKQHFKKVYHVKPPASRSESVELYLLALEFK 235
>gi|319408132|emb|CBI81785.1| cell division protein ftsJ [Bartonella schoenbuchensis R1]
Length = 241
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 111/224 (49%), Positives = 161/224 (71%), Gaps = 2/224 (0%)
Query: 6 GSSSRRGLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
G + L Q+VK + + + SSR WL RH+NDPYV +++++G+R+R+AYKL++INE+++
Sbjct: 13 GGAGSHELYQRVKKKAGTIKASSRRWLERHLNDPYVHQSKVDGYRSRAAYKLIEINERYK 72
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
IL+ ++I+DLG++PG W QVAARI GSN VV ID L ++P+ GV + DF +
Sbjct: 73 ILKKGQKIIDLGAAPGGWCQVAARIVGSNDQRPSVVGIDYLHVDPLPGVVMLEMDFFHEN 132
Query: 124 SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ + + A+G PD+VLSDMA PT GHR+ DHLRT+ LCE+A FA+ +L GG FL KT
Sbjct: 133 APQQLISALGAKPDVVLSDMAAPTTGHRQTDHLRTVYLCESAADFAISVLKPGGHFLAKT 192
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
FQGG N +L LK++F+ + HVKP ASRAESVE++L+A ++
Sbjct: 193 FQGGAENALLTKLKQNFKTIHHVKPPASRAESVELYLVALKLKE 236
>gi|84503534|ref|ZP_01001585.1| ribosomal RNA large subunit methyltransferase J [Oceanicola
batsensis HTCC2597]
gi|84388024|gb|EAQ01072.1| ribosomal RNA large subunit methyltransferase J [Oceanicola
batsensis HTCC2597]
Length = 238
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 147/237 (62%), Gaps = 11/237 (4%)
Query: 1 MVKPP-----GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K P +R LT KVK R + SS WL R +NDPYVQRA+ EG+R R+A+K
Sbjct: 1 MAKKPTGRNTSGRGQRDLTVKVKTARGRKLSSTRWLQRQLNDPYVQRAKAEGYRGRAAFK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPI 109
+++I++K + L R+VDLG +PG W QVA R++ +D+ ++EP+
Sbjct: 61 IMEIDDKFRFLVPGARVVDLGCAPGGWLQVAVPRINALGEKQGKAQGRIIGVDLQEVEPL 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G + + DF+ D+ E ++ +GG D+V+SDMA + GH++ DHLR +SLCEAA +FA
Sbjct: 121 PGAEIHQLDFMADDADEQVKTWLGGEADVVMSDMAAASSGHKQTDHLRIISLCEAAAYFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG ++ LLK+ F KV ++KP ASRA+S E F++A GFR
Sbjct: 181 FDVLAPGGTFVAKVLAGGAEGELQKLLKQKFDKVANMKPPASRADSSEKFVVATGFR 237
>gi|299133659|ref|ZP_07026853.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Afipia sp. 1NLS2]
gi|298591495|gb|EFI51696.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Afipia sp. 1NLS2]
Length = 226
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 146/227 (64%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K L VK+ + SS+ WL R +NDPYV +A+ +G+R+R+AYKL +++
Sbjct: 1 MAKDTTGR----LHVTVKSGGKRKLSSKLWLERQLNDPYVMQAKRDGYRSRAAYKLREMD 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K+ L+ + +VDLG++PG WSQ+AA+ G+ A +V+AID+L+M I GV F + DF
Sbjct: 57 DKYHFLKQGQAVVDLGAAPGGWSQIAAKRVGAEAGKGKVIAIDLLEMGEIPGVTFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
L D+ E +R +GG D+V+SDMA T GHRK D LR + L E+A FA E+LN GG F
Sbjct: 117 LADDAPEKLRAMLGGGADIVMSDMAANTTGHRKTDQLRIVGLVESAAAFAAEVLNPGGVF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L K FQ G + LK++F V HVKP ASR +S E ++LA GFR
Sbjct: 177 LAKVFQSGADATLQNELKRNFATVRHVKPAASRQDSSERYVLAMGFR 223
>gi|170739001|ref|YP_001767656.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium sp.
4-46]
gi|168193275|gb|ACA15222.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium sp.
4-46]
Length = 258
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 113/231 (48%), Positives = 148/231 (64%), Gaps = 5/231 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M G R L Q+VK R SS+ WL R +NDPYV RA+ EG+R+R+AYKLL+I+
Sbjct: 1 MSDRRGGGQRGDLKQRVKTGRGRTVSSKRWLERQLNDPYVARAKREGYRSRAAYKLLEID 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN----NTRVVAIDILDMEPILGVKFF 115
E+ +L+ +R+VDLG++PG WSQVAA GS+ RVV ID+L++EP+ GV F
Sbjct: 61 ERFHLLRPGQRVVDLGAAPGGWSQVAAAKVGSHPGAPPPRGRVVGIDLLEIEPMPGVDFL 120
Query: 116 KFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI 175
DFLD + + +GG DLV+SDMA GH+K DHLR M L E A FA E+L
Sbjct: 121 TLDFLDPSAPARLIALLGGPADLVMSDMAANATGHKKTDHLRIMGLAETAAAFAREVLAP 180
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG +L K QGGT +L LK+ F V HVKP ASRA+S E+++LA G+R
Sbjct: 181 GGAYLAKVLQGGTEGGLLADLKRDFAAVRHVKPAASRADSSELYVLATGYR 231
>gi|288958935|ref|YP_003449276.1| cell division protein methyltransferase [Azospirillum sp. B510]
gi|288911243|dbj|BAI72732.1| cell division protein methyltransferase [Azospirillum sp. B510]
Length = 235
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 102/229 (44%), Positives = 144/229 (62%), Gaps = 3/229 (1%)
Query: 1 MVKPPGSSSRRGLTQKVKNR---SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
M + S+ G V+ + SS+ WL RH+NDPYV A G+R+R+A+KLLQ
Sbjct: 1 MTEKTPSTRPGGRRATVRVKTAGKRTESSKRWLERHLNDPYVAEATKRGYRSRAAFKLLQ 60
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
++EK ++L +R+VDLG++PG W+Q+A +VV +DIL M+P+ G +
Sbjct: 61 LDEKFRLLGPGKRVVDLGAAPGGWTQIAVEKVQVAREGWKVVGLDILPMDPVPGATTMQA 120
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DFL+ + + +++A+GG DLVLSDMA PT GH++ DHLR M L EAA FA E+L GG
Sbjct: 121 DFLEEGAADRLKEALGGPADLVLSDMAAPTTGHQQTDHLRIMGLAEAAYDFAEEVLAPGG 180
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K FQGG +L L++ F V H KP ASRAES E +++A GFR
Sbjct: 181 AFVAKLFQGGAERSLLDRLRRDFAVVKHAKPPASRAESSETYVVATGFR 229
>gi|316934646|ref|YP_004109628.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris DX-1]
gi|315602360|gb|ADU44895.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris DX-1]
Length = 237
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 143/227 (62%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSC-QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K + VK+ + SS+ WL R +NDPYV +A+ +G+R+R+AYKL +I+
Sbjct: 1 MAKDTTGR----MRVTVKSGGRMKLSSKLWLERQLNDPYVAQAKRDGYRSRAAYKLTEID 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K ++L+ +VDLG++PG WSQVAA+ G+ +VVAID+L+M + GV F + DF
Sbjct: 57 DKFRLLKPGMAVVDLGAAPGGWSQVAAKKVGAAEGRGKVVAIDLLEMGEVPGVTFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
LD + + +R +GG DLV+SDMA T GHRK D LR + L E A FA E+L GG F
Sbjct: 117 LDPSAPDRLRDMLGGGADLVMSDMAANTTGHRKTDQLRIVGLVETAAMFAAEVLKPGGAF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L K FQ G ++ LK+ + V HVKP ASR +S E +LLA GFR
Sbjct: 177 LAKVFQSGADAALMAELKRDYASVKHVKPAASRKDSSERYLLATGFR 223
>gi|27379081|ref|NP_770610.1| cell division protein [Bradyrhizobium japonicum USDA 110]
gi|81737558|sp|Q89N72|RLME_BRAJA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|27352231|dbj|BAC49235.1| cell division protein [Bradyrhizobium japonicum USDA 110]
Length = 228
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 105/227 (46%), Positives = 145/227 (63%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K L +VK + SS+ WL R +NDPYV +A+ G+R+R+A+KLL+I+
Sbjct: 1 MAKDTTGR----LHVQVKTGGKRKLSSKLWLERQLNDPYVAKAKAAGYRSRAAFKLLEID 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K ++L+ +VDLG++PG WSQ+AA+ GS +VVAID+L+M I GV+F + DF
Sbjct: 57 DKFRLLKHGMAVVDLGAAPGGWSQIAAKRVGSVDGKGKVVAIDLLEMPEIAGVEFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+D D+ + +GG D+V+SDMA T GHRK D LR + L E A FA ++L GG F
Sbjct: 117 MDNDAPAKLTAMLGGGADVVMSDMAANTTGHRKTDQLRIVGLIETAAAFACDVLKPGGTF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L KTFQ G D+L LK+ F V HVKP ASR +S E ++LA GFR
Sbjct: 177 LAKTFQSGADADLLAQLKRDFATVRHVKPAASRQDSSERYVLATGFR 223
>gi|296534248|ref|ZP_06896731.1| ribosomal RNA large subunit methyltransferase J [Roseomonas
cervicalis ATCC 49957]
gi|296265422|gb|EFH11564.1| ribosomal RNA large subunit methyltransferase J [Roseomonas
cervicalis ATCC 49957]
Length = 228
Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 96/227 (42%), Positives = 146/227 (64%), Gaps = 6/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M P + RGLT +++ + +S+ WL R +NDPYV+ A+ GWR+R+A+KL++++
Sbjct: 1 MKSPT--EAGRGLTTRLRTAKGRTTASQRWLERQLNDPYVRAAKAAGWRSRAAFKLIELD 58
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
EK+++L+ +RIVDLG++PG W+QVA + G + +VV +D+L M+ I G + DF
Sbjct: 59 EKYKLLKPGQRIVDLGAAPGGWTQVAVQRAG---DRGKVVGLDLLPMDVIAGATLLQGDF 115
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
D + + A+ G DLV+SDMA T GH DHLR + L E A FA ++L GG F
Sbjct: 116 QDEAVEQAVLDALDGPADLVMSDMAPNTTGHNATDHLRILGLVELALDFADKVLVPGGAF 175
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K FQGGT ++L LK+ + V H KP ASR +S EM+++A+G+R
Sbjct: 176 IAKVFQGGTEREMLNRLKRDYATVRHAKPPASRKDSAEMYVVAQGYR 222
>gi|304391240|ref|ZP_07373184.1| ribosomal RNA large subunit methyltransferase J [Ahrensia sp.
R2A130]
gi|303296596|gb|EFL90952.1| ribosomal RNA large subunit methyltransferase J [Ahrensia sp.
R2A130]
Length = 246
Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 118/218 (54%), Positives = 160/218 (73%), Gaps = 2/218 (0%)
Query: 11 RGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
R + KVK R + SS WL R +NDPYVQ+A+ EG+ +R+AYKL+++N+++ IL+
Sbjct: 28 RNMHTKVKTARGRKLSSTLWLQRQLNDPYVQKARAEGYASRAAYKLIEMNDRYNILKPGY 87
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
R+VDLG++PG W QVAAR GS+ ++ RVV ID LDM+P+ G K DFLD D+ + +R
Sbjct: 88 RVVDLGAAPGGWCQVAAREVGSSIDDIRVVGIDYLDMDPVPGATIIKKDFLDDDAPDMLR 147
Query: 130 QAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
+A+GG+P DLV+SDMA PTIGHRK DH+RTM+L E A FALE++ GG FL KTFQGGT
Sbjct: 148 EALGGHPIDLVMSDMAAPTIGHRKTDHMRTMALVEVAFDFALEVVKPGGHFLTKTFQGGT 207
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L L+KK+F+ + HVKP ASR SVE++LLA +
Sbjct: 208 EQALLDLMKKNFKSIHHVKPPASRDGSVELYLLALDRK 245
>gi|90424572|ref|YP_532942.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris BisB18]
gi|123275111|sp|Q212R3|RLME_RHOPB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|90106586|gb|ABD88623.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris BisB18]
Length = 238
Score = 213 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 101/227 (44%), Positives = 141/227 (62%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSC-QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K L VK+ + SS+ WL R +NDPYV +A+ +G R+R+AYKL++I+
Sbjct: 1 MAKDTTGR----LRVTVKSAGRLKLSSKLWLERQLNDPYVAQAKRDGLRSRAAYKLIEID 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K+ L+ +VDLG++PG WSQVAA+ G+ +VVAID+L+M I+GV F + DF
Sbjct: 57 DKYHFLKPGIAVVDLGAAPGGWSQVAAKRVGAADGRGKVVAIDLLEMPEIVGVDFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
L ++ + IGG D+VLSDMA T GHRK D LR + L E A FA ++L GG F
Sbjct: 117 LHAEAPAKLLSMIGGKVDVVLSDMAANTTGHRKTDQLRIVGLVEDAAAFACDVLKPGGTF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K FQ G ++ LK+ F V HVKP +SR +S E ++LA GFR
Sbjct: 177 VAKVFQSGADATLVTQLKRDFVTVKHVKPASSRKDSSERYVLAMGFR 223
>gi|92118062|ref|YP_577791.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrobacter hamburgensis
X14]
gi|122417455|sp|Q1QKB6|RLME_NITHX RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91800956|gb|ABE63331.1| 23S rRNA Um-2552 2'-O-methyltransferase [Nitrobacter hamburgensis
X14]
Length = 228
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 145/227 (63%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K L VK + SS+ WL R +NDPYV +A+ +GWR+R+AYKL++++
Sbjct: 1 MAKDTTGR----LRVTVKTGGKRKLSSKLWLERQLNDPYVAQAKRDGWRSRAAYKLIEMD 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K+ L+ +VDLG++PG WSQVAAR G+ +VVAID+L+M I+GV F + DF
Sbjct: 57 DKYHFLKPGLAVVDLGAAPGGWSQVAARRVGAVDGKGKVVAIDLLEMPEIVGVTFARLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
LD D+ E + + G D+VLSDMA T GHRK D LR + L E+A FA ++L GG F
Sbjct: 117 LDADAPEKLIAMMEGGADIVLSDMAANTTGHRKTDQLRIIGLVESAAAFAADVLRPGGTF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K FQ G D+L LK+ F+ V HVKP +SR +S E +++A GFR
Sbjct: 177 IAKVFQSGADADLLVQLKRDFRTVRHVKPASSRQDSSERYVMATGFR 223
>gi|209885593|ref|YP_002289450.1| ribosomal RNA large subunit methyltransferase J [Oligotropha
carboxidovorans OM5]
gi|226705298|sp|B6JHM9|RLME_OLICO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|209873789|gb|ACI93585.1| ribosomal RNA large subunit methyltransferase J [Oligotropha
carboxidovorans OM5]
Length = 225
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 146/227 (64%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K L VK+ + SS+ WL R +NDPYV +A+ +G+R+R+AYKL +++
Sbjct: 1 MAKDTTGR----LHVTVKSGGKRKLSSKLWLERQLNDPYVAQAKRDGFRSRAAYKLREMD 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K+ L+ + +VDLG++PG WSQ+AA+ G+ A +V+AID+L+M I GV F + DF
Sbjct: 57 DKYHFLKQGQAVVDLGAAPGGWSQIAAKRVGAEAGRGKVIAIDLLEMGEIPGVTFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
L D+ E +R +GG D+V+SDMA T GHRK D LR + L E+A FA E+LN GG F
Sbjct: 117 LSDDAPEKLRAMLGGGADIVMSDMAANTTGHRKTDQLRIVGLVESAAAFAAEVLNPGGTF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L K FQ G + LK++F V HVKP ASR +S E ++LA GFR
Sbjct: 177 LAKVFQSGADATLQAELKRNFATVRHVKPAASRQDSSERYVLAMGFR 223
>gi|126462182|ref|YP_001043296.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodobacter sphaeroides
ATCC 17029]
gi|332558204|ref|ZP_08412526.1| ribosomal RNA large subunit methyltransferase E [Rhodobacter
sphaeroides WS8N]
gi|158513438|sp|A3PJK8|RLME_RHOS1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|126103846|gb|ABN76524.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodobacter sphaeroides
ATCC 17029]
gi|332275916|gb|EGJ21231.1| ribosomal RNA large subunit methyltransferase E [Rhodobacter
sphaeroides WS8N]
Length = 244
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 142/231 (61%), Gaps = 6/231 (2%)
Query: 2 VKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
K +R L +VK + + SS WL R +NDPYV RA+ EG+R R+AYK+L++++
Sbjct: 3 TKNTSGRGQRELRVRVKTAKGRKLSSTLWLERQLNDPYVIRAKKEGYRGRAAYKILELDD 62
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFF 115
K L+ R+VDLG +PG W QVA N V+ +D+ ++EPI G +
Sbjct: 63 KFGFLKPGGRVVDLGCAPGGWCQVAVERVNALGQRKNKPEGTVLGVDLQEVEPISGAEIH 122
Query: 116 KFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI 175
+ DFL D+ E ++ +GG D+V+SDMA GH+ DHLR ++LCEAA FA ++L
Sbjct: 123 QLDFLSDDADEKVKGWLGGRADVVMSDMAAAASGHKGTDHLRIIALCEAAAAFAFDVLEE 182
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG F+ K GG N++ LLKK+F KV +VKP ASRA+S E F++A GFR
Sbjct: 183 GGTFVAKVLAGGAENELQALLKKNFTKVANVKPPASRADSSEKFVVAMGFR 233
>gi|163743278|ref|ZP_02150659.1| ribosomal RNA large subunit methyltransferase J [Phaeobacter
gallaeciensis 2.10]
gi|161383466|gb|EDQ07854.1| ribosomal RNA large subunit methyltransferase J [Phaeobacter
gallaeciensis 2.10]
Length = 251
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 148/230 (64%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R L KVK R + SS WL R +NDPYV+RAQ EG+R R+AYK++++++K
Sbjct: 13 KNTSGRGQRDLKVKVKTARGRKLSSTRWLQRQLNDPYVKRAQAEGYRGRAAYKIMEVDDK 72
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
+ L + R+VDLG +PG W+QVA + R++ +D+ ++EP+ G +F +
Sbjct: 73 FRFLINGARVVDLGCAPGGWAQVAVKRINALGEKPGKAVGRIIGVDLQEVEPLAGAEFHQ 132
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF+D + + +++ +GG D+V+SDMA + GH++ DHLR +SLCE A +FA ++L G
Sbjct: 133 LDFMDDGADDKVKEWLGGKADVVMSDMAAASSGHKQTDHLRIISLCETAAYFAFDVLEDG 192
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG ++ LLK+ F KV HVKP +SR++S E F++A GFR
Sbjct: 193 GTFVAKVLAGGAEGELQKLLKQKFTKVYHVKPPSSRSDSSEKFVVATGFR 242
>gi|77463326|ref|YP_352830.1| 23S rRNA methylase [Rhodobacter sphaeroides 2.4.1]
gi|123592015|sp|Q3J2Q5|RLME_RHOS4 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|77387744|gb|ABA78929.1| 23S rRNA methylase [Rhodobacter sphaeroides 2.4.1]
Length = 244
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 100/231 (43%), Positives = 142/231 (61%), Gaps = 6/231 (2%)
Query: 2 VKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
K +R L +VK + + SS WL R +NDPYV RA+ EG+R R+AYK+L++++
Sbjct: 3 TKNTSGRGQRELRVRVKTAKGRKLSSTLWLERQLNDPYVIRAKKEGYRGRAAYKILELDD 62
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFF 115
K L+ R+VDLG +PG W QVA N V+ +D+ ++EPI G +
Sbjct: 63 KFGFLKPGGRVVDLGCAPGGWCQVAVERVNALGQKKNKPEGTVLGVDLQEVEPISGAEIH 122
Query: 116 KFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI 175
+ DFL D+ E ++ +GG D+V+SDMA GH+ DHLR ++LCEAA FA ++L
Sbjct: 123 QLDFLSDDADEKVKGWLGGRADVVMSDMAAAASGHKGTDHLRIIALCEAAAAFAFDVLEE 182
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG F+ K GG N++ LLKK+F KV +VKP ASRA+S E F++A GFR
Sbjct: 183 GGTFVAKVLAGGAENELQALLKKNFTKVANVKPPASRADSSEKFVVAMGFR 233
>gi|46200783|ref|ZP_00207841.1| COG0293: 23S rRNA methylase [Magnetospirillum magnetotacticum MS-1]
Length = 247
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 140/218 (64%), Gaps = 3/218 (1%)
Query: 12 GLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR 70
LT KVK + + SS WL R +NDPYV A+ G+R+R+A+KL+Q++E+ IL+ R
Sbjct: 23 NLTVKVKTAKRRKLSSTLWLQRQLNDPYVHEAKRLGFRSRAAFKLIQLDERFHILKPGLR 82
Query: 71 IVDLGSSPGSWSQVAARITG--SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
+VDLG++PG W+QVA G +VV +DIL+ +P+ G + DFL D+ + +
Sbjct: 83 VVDLGAAPGGWTQVAVDKVGALRPKGGGKVVGMDILEWDPLPGAITLQGDFLADDAPDRL 142
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
++A+GG D+VLSDMA PT GH DHLR + L E A FALE+L GG F+ K FQGGT
Sbjct: 143 KEALGGPADVVLSDMAAPTTGHPSTDHLRIIGLVEVALHFALEVLTPGGTFVAKVFQGGT 202
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L LK++F V H KP ASR S E +++A GFR
Sbjct: 203 EKTLLDQLKRNFTTVRHAKPPASRQGSAETYVVATGFR 240
>gi|163736478|ref|ZP_02143897.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Phaeobacter
gallaeciensis BS107]
gi|161390348|gb|EDQ14698.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Phaeobacter
gallaeciensis BS107]
Length = 251
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 148/230 (64%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R L KVK R + SS WL R +NDPYV+RAQ EG+R R+AYK++++++K
Sbjct: 13 KNTSGRGQRDLKVKVKTARGRKLSSTRWLQRQLNDPYVKRAQAEGYRGRAAYKIMEVDDK 72
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
+ L + R+VDLG +PG W+QVA + R++ +D+ ++EP+ G +F +
Sbjct: 73 FRFLINGARVVDLGCAPGGWAQVAVKRINALGEKPGKAVGRIIGVDLQEVEPLAGAEFHQ 132
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF+D + + +++ +GG D+V+SDMA + GH++ DHLR +SLCE A +FA ++L G
Sbjct: 133 LDFMDDGADDKVKEWLGGKADVVMSDMAAASSGHKQTDHLRIISLCETAAYFAFDVLEDG 192
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG ++ LLK+ F KV HVKP +SR++S E F++A GFR
Sbjct: 193 GTFVAKVLAGGAEGELQKLLKQKFTKVYHVKPPSSRSDSSEKFVVATGFR 242
>gi|86750307|ref|YP_486803.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris HaA2]
gi|123292402|sp|Q2IV68|RLME_RHOP2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|86573335|gb|ABD07892.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris HaA2]
Length = 236
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 102/228 (44%), Positives = 148/228 (64%), Gaps = 6/228 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSC-QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K + VK+ + SS+ WL+R +NDPYV +A+ +G+R+R+AYKL +I+
Sbjct: 1 MAKDTTGR----MRVTVKSGGRMKLSSKLWLDRQLNDPYVAQAKRDGYRSRAAYKLTEID 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K+ L+S + +VDLG++PG WSQVAA+ GS +++AID+L+M I GV F + DF
Sbjct: 57 DKYHFLKSGQAVVDLGAAPGGWSQVAAKRIGSANGRGKLIAIDLLEMGEIPGVTFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
LD + + +R+ +GG+ D+V+SDMA T GHRK D LR + L E+A FA E+L GG
Sbjct: 117 LDSAAPDKLREMLGGDGADVVMSDMAGNTTGHRKTDQLRIVGLVESAAQFASEVLKPGGI 176
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K FQ G ++ LK+ F V HVKP ASR +S E ++LA GFR
Sbjct: 177 FVAKVFQSGADATLMNQLKRDFATVKHVKPAASRKDSSERYVLAMGFR 224
>gi|319404629|emb|CBI78235.1| cell division protein ftsJ [Bartonella rochalimae ATCC BAA-1498]
Length = 240
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 111/216 (51%), Positives = 155/216 (71%), Gaps = 2/216 (0%)
Query: 13 LTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR 70
L Q+VK + + + SSR WL RH+NDPYV +++++G+R+RSAYKL++I+E+++I + ++
Sbjct: 18 LYQRVKKKAGTIKASSRRWLERHLNDPYVHQSKVDGYRSRSAYKLIEIDERYKIFKKGQK 77
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
I+DLG++PG W QVAAR S+ VV ID L M+P+ GV + DFL ++ + +
Sbjct: 78 IIDLGAAPGGWCQVAARKVESSDQKPSVVGIDYLPMDPLPGVVILEMDFLHENAPQKLMN 137
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
A+G PD+VLSDMA PT GHR+ DHLRT+ LCE A FAL +L GG FL K FQGG N
Sbjct: 138 ALGEQPDIVLSDMAAPTTGHRQTDHLRTVYLCEVAADFALSVLKPGGHFLAKAFQGGAEN 197
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L LK++F+ V HVKP ASRAESVE++LLA F+
Sbjct: 198 TLLTTLKQNFKTVHHVKPPASRAESVELYLLALEFK 233
>gi|240849823|ref|YP_002971211.1| cell division protein FtsJ [Bartonella grahamii as4aup]
gi|240266946|gb|ACS50534.1| cell division protein FtsJ [Bartonella grahamii as4aup]
Length = 242
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 114/231 (49%), Positives = 162/231 (70%), Gaps = 6/231 (2%)
Query: 2 VKPP----GSSSRRGLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKL 55
K P G S L Q+VK + + + SSR WL RH+NDPYV +++++G+R+R+AYKL
Sbjct: 5 TKTPRGGYGGSGSHELYQRVKKKAGTIKASSRRWLERHLNDPYVHQSKVDGYRSRAAYKL 64
Query: 56 LQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFF 115
++INE+++ L+ ++++DLG++PG W QVA RI GS+ + VV ID L ++P+ V
Sbjct: 65 IEINERYRFLKKGQKVIDLGAAPGGWCQVAERIVGSSDEDPSVVGIDYLHVDPLPRVAML 124
Query: 116 KFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI 175
+ DFL D+ + + + +G PD+VLSDMA PT GHR+ DHLRT+ LCE A FAL +L
Sbjct: 125 EMDFLHTDAPQKLIETLGTKPDVVLSDMASPTTGHRQTDHLRTIYLCEVAADFALSVLKP 184
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG FL K FQGG N +L +LK+HF+KV HVKP ASR+ESVE++LLA F+
Sbjct: 185 GGHFLAKAFQGGAENTLLTILKQHFKKVYHVKPPASRSESVELYLLALEFK 235
>gi|87198497|ref|YP_495754.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium
aromaticivorans DSM 12444]
gi|123490739|sp|Q2GB53|RLME_NOVAD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|87134178|gb|ABD24920.1| 23S rRNA Um-2552 2'-O-methyltransferase [Novosphingobium
aromaticivorans DSM 12444]
Length = 222
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 150/221 (67%), Gaps = 5/221 (2%)
Query: 7 SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
S S + +++K + SS WL+R +NDPYV++A+ EGWR+R+A+KL++++EK +L
Sbjct: 2 SRSDKNPHERLKTAKKRTASSARWLSRQLNDPYVKKAKAEGWRSRAAFKLIELDEKFGLL 61
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ +R+VDLG +PG WSQV + + ++V ID+L EPI GV F+ DF+ ++
Sbjct: 62 KGAKRVVDLGIAPGGWSQVVRKKAPA----AKIVGIDLLPTEPIEGVTIFEMDFMADEAP 117
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
E ++ A+ G PDLVLSDMA T+GH++ DHLRTM L E A FA++ L GG F+ K F
Sbjct: 118 EALQSALDGPPDLVLSDMAANTVGHKQTDHLRTMGLVETAVDFAVQTLAPGGAFVAKVFA 177
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GGT ++L +LKK+F V H KP ASR +S E +++A+GF+
Sbjct: 178 GGTDTELLAILKKNFTTVKHAKPPASRKDSSEWYVIAQGFK 218
>gi|149202447|ref|ZP_01879419.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Roseovarius sp. TM1035]
gi|149143729|gb|EDM31763.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Roseovarius sp. TM1035]
Length = 238
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 97/230 (42%), Positives = 146/230 (63%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R LT KVK R SS WL R +NDPYV+RAQ+EG+R R+A+K++++++K
Sbjct: 8 KNTSGRGQRDLTVKVKTARGRTSSSTRWLQRQLNDPYVKRAQVEGYRGRAAFKIMELDDK 67
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
+ L R++DLG +PG W QVA R+V +D+ ++EPI+G + +
Sbjct: 68 FRFLVPGARVLDLGCAPGGWCQVAVPRVNALGEKQGKAIGRIVGVDLQEVEPIMGCEIHQ 127
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF+ D+ + ++ +GG D+V+SDMA + GH++ DHLR ++LCEAA + A ++L +G
Sbjct: 128 LDFMADDADQQVKDWLGGKADVVMSDMAASSSGHKQTDHLRIIALCEAAAYLAFDVLEVG 187
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG ++ LLKK F KV +VKP ASRA+S E F++A GFR
Sbjct: 188 GTFVSKVLAGGAEGELQTLLKKRFDKVANVKPPASRADSSEKFVVATGFR 237
>gi|85715667|ref|ZP_01046647.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrobacter sp. Nb-311A]
gi|85697606|gb|EAQ35483.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrobacter sp. Nb-311A]
Length = 226
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 147/227 (64%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSCQG-SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K L V++ + SS+ WL R +NDPYV +A+ EGWR+R+A+KL++++
Sbjct: 1 MAKDTTGR----LHVTVRSGGRRKLSSKLWLERQLNDPYVAQAKREGWRSRAAFKLIEMD 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+KH+ L+ +VDLG++PG WSQVAA+ G+ +V+AID+L+M I+GV F + DF
Sbjct: 57 DKHRFLKPAMTVVDLGAAPGGWSQVAAQRVGATEGKGKVIAIDLLEMPEIVGVTFARLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
LD ++ + + +GG D+VLSDMA T GHRK D LR + L E+A FA ++L GG F
Sbjct: 117 LDNNAPDKLLAMMGGAADVVLSDMAANTTGHRKTDQLRMVGLVESAAAFAADVLRPGGTF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K FQ G +L LK+ FQ V HVKP ASR +S E ++LA GFR
Sbjct: 177 IAKVFQSGADAGLLVQLKRDFQTVRHVKPAASRQDSSERYVLATGFR 223
>gi|159044221|ref|YP_001533015.1| ribosomal RNA methyltransferase [Dinoroseobacter shibae DFL 12]
gi|157911981|gb|ABV93414.1| ribosomal RNA methyltransferase [Dinoroseobacter shibae DFL 12]
Length = 257
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 97/234 (41%), Positives = 145/234 (61%), Gaps = 8/234 (3%)
Query: 1 MVKPPG--SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
M K G +R L +VK R + SS WL R +NDPYVQ+A+ EG+R R+A+K+L+
Sbjct: 15 MPKKAGNSGRGQRDLRVRVKTARGRKLSSTLWLERQLNDPYVQKAKREGYRGRAAFKILE 74
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGV 112
I+E+ + L R+VDLG +PG W QVA R S RV+ +D+ +++P+ G
Sbjct: 75 IDERFRFLVPGARVVDLGCAPGGWCQVAVRRVNALGEKSGKAQGRVLGVDLKEIDPVPGA 134
Query: 113 KFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEM 172
+ DF++ + ++ +GG D+V+SDMA + GH++ DHLR ++LCEAA A ++
Sbjct: 135 ETHVLDFMEDGADAQVKAWLGGKADVVMSDMAAASSGHKQTDHLRIVALCEAAAHLAFDV 194
Query: 173 LNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L GG F+ K GG ++ LLK+ F KVI+VKP ASR++S E F++A GFR
Sbjct: 195 LEEGGTFVAKVLAGGAERELQTLLKRAFTKVINVKPDASRSDSSEKFVVATGFR 248
>gi|163852846|ref|YP_001640889.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
extorquens PA1]
gi|163664451|gb|ABY31818.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
extorquens PA1]
Length = 239
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 112/214 (52%), Positives = 149/214 (69%), Gaps = 4/214 (1%)
Query: 14 TQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
Q+VK R S + WL R +NDPYV RA+ EG+R+R+A+KLL+I+E+ ++L+ +RIV
Sbjct: 16 KQRVKTGRGRTLSQKRWLERQLNDPYVARAKREGYRSRAAFKLLEIDERFKLLKPGQRIV 75
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQVAARI G + R+V ID+L++EP+ G F DFLD + E + + +
Sbjct: 76 DLGAAPGGWSQVAARILGES---GRIVGIDLLEIEPMPGATFITLDFLDPSAPERLTELL 132
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG DLVLSDMA T GH+K DHLR + L E A FA E+L GG +L K FQGGT D+
Sbjct: 133 GGRADLVLSDMAANTTGHKKTDHLRIIGLAETAAAFAREILAPGGAYLAKVFQGGTEGDL 192
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L LK+ F V HVKP ASRA+S E+++LA GFR
Sbjct: 193 LTELKRDFATVRHVKPQASRADSSELYVLATGFR 226
>gi|182678893|ref|YP_001833039.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182634776|gb|ACB95550.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 234
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 107/226 (47%), Positives = 143/226 (63%), Gaps = 1/226 (0%)
Query: 2 VKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
V G R L +VK R SS WL R +NDPYV RA+ EG R+R+AYKL++I+E
Sbjct: 4 VSSSGREGGRSLKTRVKTARKRSLSSTLWLERQLNDPYVARAKREGMRSRAAYKLIEIDE 63
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
++ L+ +++VDLG++PG WSQVA R S RV+ ID+L+++P+ G +F DFL
Sbjct: 64 RYPFLKPGQKVVDLGAAPGGWSQVAVRKVQSEQGKGRVIGIDLLEVDPMPGAEFKVLDFL 123
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
D + E + +G D+VLSDMA GH+K DHLR + L E A FA +L GG FL
Sbjct: 124 DPAAPETLEHWLGAKADVVLSDMAANATGHKKTDHLRIVGLVELAADFASTILAPGGSFL 183
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K QGGT N +L LK+ F V HVKP ASRA+S E+++LA GFR
Sbjct: 184 AKVLQGGTENSLLAKLKQEFASVRHVKPQASRADSSELYMLATGFR 229
>gi|192290875|ref|YP_001991480.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris TIE-1]
gi|226705305|sp|B3QFD2|RLME_RHOPT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|192284624|gb|ACF01005.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris TIE-1]
Length = 237
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 145/227 (63%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSC-QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K + VK+ + SS+ WL R +NDPYV +A+ +G+R+R+AYKL +I+
Sbjct: 1 MAKDTTGR----MRVTVKSGGRMKLSSKLWLERQLNDPYVAQAKRDGYRSRAAYKLTEID 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K ++L+S +VDLG++PG WSQVAA+ G+ +VVAID+L+M + GV F + DF
Sbjct: 57 DKFRLLKSGMAVVDLGAAPGGWSQVAAKKVGAADGRGKVVAIDLLEMGEVPGVTFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
LD + E +R+ +GG D+V+SDMA T GHRK D LR + L E A FA E+L GG F
Sbjct: 117 LDPSAPERLREMLGGGADIVMSDMAANTTGHRKTDQLRIVGLVETAAMFASEVLKPGGTF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L K FQ G ++ LK+ + V HVKP ASR +S E +LLA GFR
Sbjct: 177 LAKVFQSGADASLMTELKRDYASVKHVKPAASRKDSSERYLLATGFR 223
>gi|39935266|ref|NP_947542.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodopseudomonas
palustris CGA009]
gi|81562937|sp|Q6N7Q9|RLME_RHOPA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|39649118|emb|CAE27638.1| cell division protein FtsJ [Rhodopseudomonas palustris CGA009]
Length = 237
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 145/227 (63%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSC-QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K + VK+ + SS+ WL R +NDPYV +A+ +G+R+R+AYKL +I+
Sbjct: 1 MAKDTTGR----MRVTVKSGGRMKLSSKLWLERQLNDPYVAQAKRDGYRSRAAYKLTEID 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+K ++L+S +VDLG++PG WSQVAA+ G+ +VVAID+L+M + GV F + DF
Sbjct: 57 DKFRLLKSGMAVVDLGAAPGGWSQVAAKKVGAADGRGKVVAIDLLEMGEVPGVTFAQLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
LD + E +R+ +GG D+V+SDMA T GHRK D LR + L E A FA E+L GG F
Sbjct: 117 LDPSAPERLREMLGGGADIVMSDMAANTTGHRKTDQLRIVGLVETAAMFASEVLKPGGTF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L K FQ G ++ LK+ + V HVKP ASR +S E +LLA GFR
Sbjct: 177 LAKVFQSGADASLMTELKRDYASVKHVKPAASRKDSSERYLLATGFR 223
>gi|240140172|ref|YP_002964649.1| Ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552
methyltransferase) [Methylobacterium extorquens AM1]
gi|254562611|ref|YP_003069706.1| ribosomal RNA large subunit methyltransferase J [Methylobacterium
extorquens DM4]
gi|240010146|gb|ACS41372.1| Ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552
methyltransferase) [Methylobacterium extorquens AM1]
gi|254269889|emb|CAX25867.1| Ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552
methyltransferase) [Methylobacterium extorquens DM4]
Length = 239
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 112/214 (52%), Positives = 149/214 (69%), Gaps = 4/214 (1%)
Query: 14 TQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
Q+VK R S + WL R +NDPYV RA+ EG+R+R+A+KLL+I+E+ ++L+ +RIV
Sbjct: 16 KQRVKTGRGRTLSQKRWLERQLNDPYVARAKREGYRSRAAFKLLEIDERFKLLKPGQRIV 75
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQVAARI G + R+V ID+L++EP+ G F DFLD + E + + +
Sbjct: 76 DLGAAPGGWSQVAARILGES---GRIVGIDLLEIEPMPGATFITLDFLDPSAPERLTELL 132
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG DLVLSDMA T GH+K DHLR + L E A FA E+L GG +L K FQGGT D+
Sbjct: 133 GGRADLVLSDMAANTTGHKKTDHLRIIGLAETAAVFAREILAPGGAYLAKVFQGGTEGDL 192
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L LK+ F V HVKP ASRA+S E+++LA GFR
Sbjct: 193 LTELKRDFATVRHVKPQASRADSSELYVLATGFR 226
>gi|218531672|ref|YP_002422488.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
chloromethanicum CM4]
gi|218523975|gb|ACK84560.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
chloromethanicum CM4]
Length = 239
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 112/214 (52%), Positives = 149/214 (69%), Gaps = 4/214 (1%)
Query: 14 TQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
Q+VK R S + WL R +NDPYV RA+ EG+R+R+A+KLL+I+E+ ++L+ +RIV
Sbjct: 16 KQRVKTGRGRTLSQKRWLERQLNDPYVARAKREGYRSRAAFKLLEIDERFKLLKPGQRIV 75
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQVAARI G + R+V ID+L++EP+ G F DFLD + E + + +
Sbjct: 76 DLGAAPGGWSQVAARILGES---GRIVGIDLLEIEPMPGATFITLDFLDPSAPERLTELL 132
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG DLVLSDMA T GH+K DHLR + L E A FA E+L GG +L K FQGGT D+
Sbjct: 133 GGRADLVLSDMAANTTGHKKTDHLRIIGLAETAAVFAREILAPGGAYLAKVFQGGTEGDL 192
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L LK+ F V HVKP ASRA+S E+++LA GFR
Sbjct: 193 LTELKRDFATVRHVKPQASRADSSELYVLATGFR 226
>gi|260427088|ref|ZP_05781067.1| ribosomal RNA large subunit methyltransferase J [Citreicella sp.
SE45]
gi|260421580|gb|EEX14831.1| ribosomal RNA large subunit methyltransferase J [Citreicella sp.
SE45]
Length = 238
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 97/237 (40%), Positives = 144/237 (60%), Gaps = 11/237 (4%)
Query: 1 MVKPP-----GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K P +R L KVK R SS WL R +NDPYV+RA+ EG+R R+A+K
Sbjct: 1 MAKKPTGKNTSGRGQRDLKVKVKTARGRTLSSTRWLQRQLNDPYVKRAKDEGFRGRAAFK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS-----NANNTRVVAIDILDMEPI 109
+L+++E+ L+ R+VDLG +PG W QVA S N V+ +D+ ++ P+
Sbjct: 61 ILELDERFGFLKPGARVVDLGCAPGGWCQVAVPRVNSLGEKKNKPQGFVLGVDLQEVLPV 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G ++ DFL++ + + +++ +GG D+V+SDMA + GH++ DHLR +SLCEAA A
Sbjct: 121 PGADIYQLDFLEMGADDKVKEWLGGRADVVMSDMAASSSGHKQTDHLRIISLCEAAAELA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG + LLK+ F KV +VKP +SRA+S E F++A GFR
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEQGLQSLLKQRFDKVYNVKPPSSRADSSEKFVVATGFR 237
>gi|332188162|ref|ZP_08389891.1| ftsJ-like methyltransferase family protein [Sphingomonas sp. S17]
gi|332011769|gb|EGI53845.1| ftsJ-like methyltransferase family protein [Sphingomonas sp. S17]
Length = 231
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 147/221 (66%), Gaps = 5/221 (2%)
Query: 7 SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
S GL Q+V+ R+ S WL R +NDPYV+RA+ EG+R+R+AYKL++++E+ L
Sbjct: 2 SRGNSGLHQRVRTARNRTAQSTRWLERQLNDPYVRRAKAEGYRSRAAYKLIELDERFGFL 61
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ +RI+DLG +PG WSQV R + A VV ID+L ++PI GV F+ DF+D +
Sbjct: 62 RGKKRIIDLGIAPGGWSQVVRRKLPNAA----VVGIDLLPVDPIDGVTIFEMDFMDDAAP 117
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
+ + +A+GG PDLV+SDMA T+GH + D LRTM L E A FA ++L+ GG F+ K F
Sbjct: 118 DRLMEALGGAPDLVMSDMAANTVGHPQTDALRTMGLVETAFAFACDVLSPGGVFVSKVFA 177
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG + ++ +K+HF V H KP +SR SVE F++A+GF+
Sbjct: 178 GGADSQLVAEMKRHFATVKHAKPPSSRKGSVEWFVVAQGFK 218
>gi|84517387|ref|ZP_01004740.1| ribosomal RNA large subunit methyltransferase J [Loktanella
vestfoldensis SKA53]
gi|84508751|gb|EAQ05215.1| ribosomal RNA large subunit methyltransferase J [Loktanella
vestfoldensis SKA53]
Length = 243
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 145/231 (62%), Gaps = 6/231 (2%)
Query: 2 VKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
K +R L KVK R + SS WL R +NDPYV+RA+ +G+R R+AYK+L++++
Sbjct: 7 TKNTSGRGQRDLHVKVKTARGRKLSSTQWLQRQLNDPYVKRAKADGYRGRAAYKILELDD 66
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFF 115
K++ L RIVDLG +PG W QVA + + V+ ID+ +++PI G + +
Sbjct: 67 KYRFLVPGARIVDLGCAPGGWLQVAVKRANALGERTSKAQGYVLGIDLQEVDPIPGAEIY 126
Query: 116 KFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI 175
+ DF+ D+ +R +GGN D+V+SDMA GH++ DH R ++LCEAA FA ++LN
Sbjct: 127 QLDFMADDADVQVRDWLGGNADVVMSDMAASASGHKQTDHNRIIALCEAAAHFAFDVLNE 186
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG F+ K GG D+ LLK F+KV +VKP ASR++S E F++A GF+
Sbjct: 187 GGTFVAKVLAGGAEGDLQKLLKARFEKVANVKPPASRSDSSEKFVVATGFK 237
>gi|46203098|ref|ZP_00208794.1| COG0293: 23S rRNA methylase [Magnetospirillum magnetotacticum MS-1]
Length = 251
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 110/214 (51%), Positives = 148/214 (69%), Gaps = 4/214 (1%)
Query: 14 TQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
Q+VK R S + WL R +NDPYV RA+ EG+R+R+A+KL++I+E+ ++L+ +RIV
Sbjct: 29 KQRVKTGRGRTLSQKRWLERQLNDPYVARAKREGYRSRAAFKLIEIDERFKLLKPGQRIV 88
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQVAA+I G N +V ID+L++EP+ G F DFLD + + + +
Sbjct: 89 DLGAAPGGWSQVAAKIVGENGC---IVGIDLLEIEPMAGATFITLDFLDESAPARLHELL 145
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG DLVLSDMA T GH+K DHLRT+ L E A FA E+L GG FL K FQGGT ++
Sbjct: 146 GGKADLVLSDMAANTTGHKKTDHLRTIGLAETAAAFAAEILAPGGAFLAKVFQGGTEGEL 205
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L LK+ F V HVKP ASRA+S E+++LA GFR
Sbjct: 206 LADLKRDFAVVRHVKPAASRADSSELYVLATGFR 239
>gi|300022350|ref|YP_003754961.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Hyphomicrobium
denitrificans ATCC 51888]
gi|299524171|gb|ADJ22640.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Hyphomicrobium
denitrificans ATCC 51888]
Length = 242
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 110/222 (49%), Positives = 144/222 (64%), Gaps = 2/222 (0%)
Query: 7 SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
S +R L VK R SS WL R +NDPYV ++ EG R+R+AYKL +I+ ++ L
Sbjct: 16 SGGQRQLHTAVKTARKRSVSSARWLERQLNDPYVAASKREGLRSRAAYKLREIDARYNFL 75
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ +R++DLG++PG WSQVAA S +VVAID L EPI GV + DF D ++
Sbjct: 76 KPGQRVIDLGAAPGGWSQVAAESVKSVGGKGQVVAIDYLSFEPIPGVDIIEMDFTDPNAE 135
Query: 126 EFIRQ-AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
+ ++ GG D+VLSDMA PT+GH K DHLR M L EAA FA ++L GG FL K F
Sbjct: 136 DLLKSRLRGGKADVVLSDMAAPTVGHAKTDHLRIMGLAEAAAAFAADVLEPGGVFLCKVF 195
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
QGGT D+L +LK+ F+ V HVKP ASR ES E+++LA GFR
Sbjct: 196 QGGTERDLLDMLKRDFKVVRHVKPPASRQESSELYVLATGFR 237
>gi|254475869|ref|ZP_05089255.1| ribosomal RNA large subunit methyltransferase J [Ruegeria sp. R11]
gi|214030112|gb|EEB70947.1| ribosomal RNA large subunit methyltransferase J [Ruegeria sp. R11]
Length = 257
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 95/230 (41%), Positives = 149/230 (64%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R L KVK+ R + SS WL R +NDPYV+RAQ EG+R R+AYK++++++K
Sbjct: 13 KNTSGRGQRELKVKVKSARGRKLSSTRWLQRQLNDPYVKRAQAEGYRGRAAYKIMEVDDK 72
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
+ L + R+VDLG +PG W+QVA + + R++ +D+ ++EP+ G +F +
Sbjct: 73 FRFLVNGARVVDLGCAPGGWAQVAVKRINALGEKPGKSVGRIIGVDLQEVEPLAGAEFHQ 132
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF+ + + +++ +GG D+V+SDMA + GH++ DHLR +SLCE A +FA ++L G
Sbjct: 133 LDFMSDGADDKVKEWLGGKADVVMSDMAAASSGHKQTDHLRIISLCETAAYFAFDVLEEG 192
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG ++ LLK+ F KV HVKP +SR++S E F++A GFR
Sbjct: 193 GTFVAKVLAGGAEGELQKLLKQKFTKVYHVKPPSSRSDSSEKFVVATGFR 242
>gi|85374883|ref|YP_458945.1| 23S rRNA methylase [Erythrobacter litoralis HTCC2594]
gi|122543835|sp|Q2N843|RLME_ERYLH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|84787966|gb|ABC64148.1| 23S rRNA methylase [Erythrobacter litoralis HTCC2594]
Length = 220
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 145/221 (65%), Gaps = 5/221 (2%)
Query: 7 SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
S S + ++VK R SS WL R +NDPYV++A+ +G+R+R+AYKL++++ K IL
Sbjct: 2 SRSGKDPGKRVKTARKRSASSTRWLERQLNDPYVKQAKADGYRSRAAYKLIELDGKFGIL 61
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ R+VDLG +PG W+QV ++ +V ID+L+ EPI GV + DF+ ++
Sbjct: 62 KGASRVVDLGIAPGGWAQVVRKVRPKAG----IVGIDLLETEPIEGVTILQMDFMADEAP 117
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
+ A+ G PDLV+SDMA T+GH++ DHLRTM L EAA +FA+E L GG FL K
Sbjct: 118 AGLEAALDGPPDLVMSDMAANTVGHKQTDHLRTMGLVEAAAWFAIETLEEGGTFLAKVLA 177
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GGT ND+L LLK HF+ V H KP ASR S E +++A+GF+
Sbjct: 178 GGTDNDLLKLLKSHFKTVKHAKPPASRKGSSEWYVVAQGFK 218
>gi|326386107|ref|ZP_08207731.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium
nitrogenifigens DSM 19370]
gi|326209332|gb|EGD60125.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Novosphingobium
nitrogenifigens DSM 19370]
Length = 225
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 144/221 (65%), Gaps = 5/221 (2%)
Query: 7 SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
S S R +++ + SS WL R +NDPYVQ+A+ EGWR+R+A+K+++++EK +L
Sbjct: 2 SRSGRDPGTRLRTAKKRTASSARWLTRQLNDPYVQKARAEGWRSRAAFKMIELDEKFALL 61
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ RR+VDLG +PG WSQV + +VV ID+L +PI GV F+ DF+ ++
Sbjct: 62 KGARRVVDLGIAPGGWSQVVRQRAPL----AKVVGIDLLPTDPIEGVTIFQMDFMADEAP 117
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
E + A+ G PDLV+SDMA T+GH++ DHLRTM L E A FA+ L GG F+ K F
Sbjct: 118 EALTGALDGPPDLVISDMAANTVGHKQTDHLRTMGLVETAVDFAITHLAPGGAFVAKVFA 177
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GGT +L LLK++F V H KP ASR +S E +++A+GF+
Sbjct: 178 GGTDTTLLNLLKRNFTTVKHAKPPASRKDSSEWYVIAQGFK 218
>gi|114762829|ref|ZP_01442261.1| ribosomal RNA large subunit methyltransferase J [Pelagibaca
bermudensis HTCC2601]
gi|114544439|gb|EAU47446.1| ribosomal RNA large subunit methyltransferase J [Roseovarius sp.
HTCC2601]
Length = 238
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 98/237 (41%), Positives = 143/237 (60%), Gaps = 11/237 (4%)
Query: 1 MVKPP-----GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K P +R L KVK+ R SS WL R +NDPYV+RA+ EG+R R+A+K
Sbjct: 1 MAKKPTGKNTSGRGQRDLKVKVKSARGRTTSSTRWLQRQLNDPYVKRAKDEGYRGRAAFK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPI 109
+L+++EK++ L R+VDLG +PG W QVA S V+ +D+ ++ PI
Sbjct: 61 ILELDEKYRFLVPGARVVDLGCAPGGWCQVAVPRVNALGERSGKAQGFVLGVDLQEVLPI 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G + + DF++ + + ++ +GG D+V+SDMA + GH++ DHLR +SLCEAA A
Sbjct: 121 PGAEIHQLDFMEEGADDKVKAWLGGKADVVMSDMAASSSGHKQTDHLRIISLCEAAAELA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG + LLKK F KV +VKP ASR++S E F++A GFR
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEQGLQALLKKRFDKVANVKPPASRSDSSEKFVVATGFR 237
>gi|126737830|ref|ZP_01753560.1| ribosomal RNA large subunit methyltransferase J [Roseobacter sp.
SK209-2-6]
gi|126721223|gb|EBA17927.1| ribosomal RNA large subunit methyltransferase J [Roseobacter sp.
SK209-2-6]
Length = 238
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 101/237 (42%), Positives = 149/237 (62%), Gaps = 11/237 (4%)
Query: 1 MVKPPG-----SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K P +R L KVK R + SS WL R +NDPYV+RAQ EG+R R+AYK
Sbjct: 1 MAKTPTGKNTSGRGQRDLKVKVKTARGRKLSSTRWLQRQLNDPYVRRAQAEGYRGRAAYK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPI 109
++++++K + L R+VDLG +PG WSQVA + S ++ +D+ ++EP+
Sbjct: 61 IMELDDKFRFLVPGARVVDLGCAPGGWSQVAVKRINALGERSGKAIGTILGVDLQEIEPL 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G +F + DF+D + E ++ +GGN D+V+SDMA + GH++ DHLR MSLCE A +F+
Sbjct: 121 AGAEFHQLDFMDEGADEQVKTWLGGNADVVMSDMAAASSGHKQTDHLRIMSLCETAAYFS 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG ++ LLK+ F KV +VKP ASR++S E F++A GFR
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEGELQKLLKQKFTKVANVKPPASRSDSSEKFVVAMGFR 237
>gi|188582866|ref|YP_001926311.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium populi
BJ001]
gi|179346364|gb|ACB81776.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium populi
BJ001]
Length = 244
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 112/214 (52%), Positives = 150/214 (70%), Gaps = 4/214 (1%)
Query: 14 TQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
Q+VK R S + WL R +NDPYV RA+ EG+R+R+A+KL++I+E+ ++L+ +RIV
Sbjct: 22 KQRVKTGRGRTLSQKRWLERQLNDPYVARAKREGYRSRAAFKLIEIDERFKLLKPAQRIV 81
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQVAA+I G + R+V ID+LD+EP+ G F DFLD + E + + +
Sbjct: 82 DLGAAPGGWSQVAAKIVGES---GRIVGIDLLDVEPMAGATFITLDFLDDSAPERLTELL 138
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG DLVLSDMA T GH+K DHLRT+ L E+A FA E+L GG FL K FQGGT +
Sbjct: 139 GGKADLVLSDMAANTTGHKKTDHLRTIGLAESAAAFAAEILAPGGAFLAKVFQGGTEGQL 198
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L LK+ F V HVKP ASRA+S E+++LA GFR
Sbjct: 199 LADLKRDFATVRHVKPAASRADSSELYVLATGFR 232
>gi|163731318|ref|ZP_02138765.1| ribosomal RNA large subunit methyltransferase, putative
[Roseobacter litoralis Och 149]
gi|161394772|gb|EDQ19094.1| ribosomal RNA large subunit methyltransferase, putative
[Roseobacter litoralis Och 149]
Length = 240
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 148/237 (62%), Gaps = 11/237 (4%)
Query: 1 MVKPPG-----SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
MVK PG +R L KVK R + SS WL R +NDPYV+RA+ EG+R R+AYK
Sbjct: 1 MVKKPGSQNTSGRGQRDLKVKVKTARGRKLSSTRWLQRQLNDPYVKRARSEGYRGRAAYK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPI 109
+L+++++ + L R+VDLG +PG W QVA + + V+ +D+ +MEPI
Sbjct: 61 ILELDDRFRFLVPGARVVDLGCAPGGWCQVAVKRVNALGERTSKAQGSVLGVDLQEMEPI 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G ++ DF+ D+ + +R +GG D+V+SDMA + GH++ DHLR ++LCEAA +FA
Sbjct: 121 AGADLYQLDFMADDADQQVRAWMGGKADVVMSDMAASSSGHKQTDHLRIIALCEAAAYFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG ++ LLK+ F KV ++KP ASR +S E F++A GFR
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEGELQKLLKQRFTKVSNIKPPASRQDSSEKFVVATGFR 237
>gi|85702831|ref|ZP_01033935.1| ribosomal RNA large subunit methyltransferase J [Roseovarius sp.
217]
gi|85671759|gb|EAQ26616.1| ribosomal RNA large subunit methyltransferase J [Roseovarius sp.
217]
Length = 238
Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 97/230 (42%), Positives = 145/230 (63%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R LT KVK R SS WL R +NDPYV+RAQ+EG+R R+A+K++++++K
Sbjct: 8 KNTSGRGQRDLTVKVKTARGRTSSSTRWLQRQLNDPYVKRAQIEGYRGRAAFKIMELDDK 67
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
+ L R++DLG +PG W QVA R+V +D+ ++EPI G + +
Sbjct: 68 FRFLVPGARVLDLGCAPGGWCQVAVPRVNALGEKKGKAIGRIVGVDLQEVEPIAGCEIHQ 127
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF+ D+ + ++ +GG D+V+SDMA + GH++ DHLR ++LCEAA + A ++L +G
Sbjct: 128 LDFMADDADQQVKDWLGGKADVVMSDMAASSSGHKQTDHLRIIALCEAAAYLAFDVLEVG 187
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG ++ LLKK F KV +VKP ASRA+S E F++A GFR
Sbjct: 188 GTFVSKVLAGGAEGELQTLLKKRFDKVANVKPPASRADSSEKFVIATGFR 237
>gi|121602887|ref|YP_988636.1| ribosomal RNA large subunit methyltransferase J [Bartonella
bacilliformis KC583]
gi|143459401|sp|A1URN3|RLME_BARBK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120615064|gb|ABM45665.1| ribosomal RNA large subunit methyltransferase J [Bartonella
bacilliformis KC583]
Length = 239
Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 113/216 (52%), Positives = 158/216 (73%), Gaps = 2/216 (0%)
Query: 13 LTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR 70
L Q+VK + + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++INE+++IL+ ++
Sbjct: 20 LYQRVKKKAGTIKASSRRWLERHLNDPYVHQSKADGYRSRAAYKLIEINERYKILKKGQK 79
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
I+DLG++PG W QVAAR+ S N VV ID L MEP+ GV + DF D+ + +
Sbjct: 80 IIDLGAAPGGWCQVAARLVESKDYNPSVVGIDYLHMEPLPGVAILEMDFFHEDAPQELIS 139
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
+G PD+VLSDMA PT GHR+ DHLRT++LCEAA F++ +L GG FL KTFQGG
Sbjct: 140 TLGSKPDVVLSDMAAPTTGHRQTDHLRTIALCEAAVHFSISVLKPGGHFLTKTFQGGAEG 199
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L LK++F+KV HVKP ASRAESVE++LLA F+
Sbjct: 200 NLLATLKQNFKKVHHVKPPASRAESVELYLLALQFK 235
>gi|260433766|ref|ZP_05787737.1| ribosomal RNA large subunit methyltransferase J [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417594|gb|EEX10853.1| ribosomal RNA large subunit methyltransferase J [Silicibacter
lacuscaerulensis ITI-1157]
Length = 238
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 147/230 (63%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R L KVK R + SS WL R +NDPYV+RAQ EG+R R+AYK+L++++K
Sbjct: 8 KNTSGRGQRDLKVKVKTARGRKLSSTRWLQRQLNDPYVKRAQAEGYRGRAAYKILELDDK 67
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
++ L R+VDLG +PG W QVA + S V+ ID+ ++EPI G + +
Sbjct: 68 YRFLVPGARVVDLGCAPGGWCQVAVKRVNALGEKSGKKVGTVLGIDLQEVEPIAGAEIHQ 127
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF++ + E +++ +GG D+V+SDMA + GH++ DHLR ++LCE A +FA ++L G
Sbjct: 128 LDFMEDGADEKVKEWLGGKADVVMSDMAAASSGHKQTDHLRIIALCETAAYFAFDVLEKG 187
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG D+ LLK+ F+KV +VKP ASR++S E F++A GFR
Sbjct: 188 GTFVAKVLAGGAEGDLQKLLKQKFEKVANVKPPASRSDSSEKFVVATGFR 237
>gi|310816173|ref|YP_003964137.1| ribosomal RNA large subunit methyltransferase J [Ketogulonicigenium
vulgare Y25]
gi|308754908|gb|ADO42837.1| ribosomal RNA large subunit methyltransferase J [Ketogulonicigenium
vulgare Y25]
Length = 249
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 93/238 (39%), Positives = 144/238 (60%), Gaps = 12/238 (5%)
Query: 1 MVKPPG------SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAY 53
M KPP +R LT KVK + + SS WL R +NDPYV RA+ EG+R R+AY
Sbjct: 1 MTKPPSKTGGTSGRGQRDLTVKVKTAKGRKLSSTKWLERQLNDPYVVRARAEGYRGRAAY 60
Query: 54 KLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEP 108
K++++++K L+ R+VDLG +PG W QVA + R++ +D+ ++P
Sbjct: 61 KIMELDDKFGFLKPGARVVDLGCAPGGWLQVAVPRINALGERAGKPVGRILGLDLQVVDP 120
Query: 109 ILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFF 168
+ G + DFL D+ +++ +GG D+V+SDMA GH++ DHLR ++LCEAA +
Sbjct: 121 VPGAEVHVLDFLADDADLQVKEWLGGQADVVMSDMAASASGHKQTDHLRIIALCEAAAYL 180
Query: 169 ALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
A ++L GG F+ K GG ++ +LK+ F KV +VKP +SR++S E F++A G+R
Sbjct: 181 AFDVLTPGGTFVCKVLAGGAEGELQKILKQKFTKVENVKPPSSRSDSSEKFVVATGYR 238
>gi|75676335|ref|YP_318756.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrobacter winogradskyi
Nb-255]
gi|83305662|sp|Q3SQN7|RLME_NITWN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|74421205|gb|ABA05404.1| 23S rRNA Um-2552 2'-O-methyltransferase [Nitrobacter winogradskyi
Nb-255]
Length = 230
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 143/227 (62%), Gaps = 5/227 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M K L VK + SS+ WL R +NDPYV +A+ +GWR+R+++KL++++
Sbjct: 1 MAKDTTGR----LHVTVKTGGKRKLSSKLWLERQLNDPYVAQAKRDGWRSRASFKLIEMD 56
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
+KH+ L+ +VDLG++PG WSQVAA+ G+ RV+AID+L+M I+GV F + DF
Sbjct: 57 DKHRFLKPGMTVVDLGAAPGGWSQVAAKRVGAAEGKGRVIAIDLLEMPEIVGVTFARLDF 116
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
LD + + + + G D+VLSDMA T GHRK D LR + L E+A F ++L GG F
Sbjct: 117 LDDSAPDKLLAMMDGAADVVLSDMAANTTGHRKTDQLRIVGLVESAAAFTSDVLRPGGTF 176
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K FQ G +L LK+ FQ V HVKP ASR +S E +++A GFR
Sbjct: 177 IAKVFQSGADAGLLVQLKRDFQTVRHVKPAASRQDSSERYVMATGFR 223
>gi|49474969|ref|YP_033010.1| cell division protein ftsJ [Bartonella henselae str. Houston-1]
gi|81648296|sp|Q6G4Z3|RLME_BARHE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|49237774|emb|CAF26967.1| Cell division protein ftsJ [Bartonella henselae str. Houston-1]
Length = 247
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 110/223 (49%), Positives = 156/223 (69%), Gaps = 2/223 (0%)
Query: 6 GSSSRRGLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
G S L Q+VK + + SSR WL RH+NDPYV +++++G+R+R+AYKL++IN++++
Sbjct: 13 GGSGSHKLYQRVKKKAGTITASSRRWLERHLNDPYVHQSKVDGYRSRAAYKLIEINQRYK 72
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
L+ ++I+DLG++PG W QV+ I GS+ VV ID L ++P+ GV + DFL D
Sbjct: 73 FLKKGQKIIDLGAAPGGWCQVSGCIVGSSDEKPSVVGIDYLHVDPLPGVVMLEMDFLHSD 132
Query: 124 SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ + + A+G PD+VLSDMA PT GHR+ DHLRT+ LCE A FAL +L GG FL K
Sbjct: 133 APQKLIDALGTKPDVVLSDMAAPTTGHRQTDHLRTIYLCEVAADFALSVLKPGGHFLAKA 192
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FQGG N +L LK++F+ V HVKP ASR+ESVE++LLA F+
Sbjct: 193 FQGGAENTLLTTLKQNFKTVHHVKPPASRSESVELYLLALEFK 235
>gi|85709359|ref|ZP_01040424.1| 23S rRNA methylase [Erythrobacter sp. NAP1]
gi|85688069|gb|EAQ28073.1| 23S rRNA methylase [Erythrobacter sp. NAP1]
Length = 221
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 149/221 (67%), Gaps = 5/221 (2%)
Query: 7 SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
+ S R ++VK + SS WL R +NDPYV++A+ +G+R+R+AYKLL+++EK +L
Sbjct: 2 ARSGRDPDKRVKTAKKRTESSTRWLQRQLNDPYVKQAKADGYRSRAAYKLLELDEKFSLL 61
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ RR+VDLG +PG W +++ + A +V ID+L EPI GV F+ DF+D +
Sbjct: 62 RGTRRVVDLGIAPGGW----SQVVRAKAPKAEIVGIDLLPTEPIEGVTIFEMDFMDDAAP 117
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
E + A+GG PDLV+SDMA T+GH++ DHLRTM+L EA +FA+E L GG F+ K
Sbjct: 118 EKLESALGGPPDLVISDMAANTVGHKQTDHLRTMALVEAGAWFAVETLEKGGAFVAKVLA 177
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GGT ++L LLK+HF+ V H KP ASR S E +++A+GF+
Sbjct: 178 GGTDAELLKLLKRHFKTVKHAKPPASRKGSSEWYVVAQGFK 218
>gi|83951908|ref|ZP_00960640.1| ribosomal RNA large subunit methyltransferase J [Roseovarius
nubinhibens ISM]
gi|83836914|gb|EAP76211.1| ribosomal RNA large subunit methyltransferase J [Roseovarius
nubinhibens ISM]
Length = 239
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 95/230 (41%), Positives = 145/230 (63%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R LT KVK R + SS WL R +NDPYV+RAQ EG+R R+A+K++++++K
Sbjct: 9 KNTSGRGQRDLTVKVKTARGRRNSSTRWLQRQLNDPYVKRAQAEGYRGRAAFKIMELDDK 68
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
+ L + R+VDLG +PG W+QVA R + +D+ ++EP+ G +F
Sbjct: 69 FRFLVNGARVVDLGCAPGGWAQVAVPRINALGEKPGKAVGRFIGVDLQEVEPLAGAEFHV 128
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF++ + + +++ +GG D+V+SDMA + GH++ DHLR ++LCEAA + A ++L G
Sbjct: 129 LDFMEDGADDKVKEWLGGRADVVMSDMAASSSGHKQTDHLRIIALCEAAAYLAFDVLEEG 188
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG D+ LLK+ F KV +VKP ASR +S E F++A GFR
Sbjct: 189 GTFVSKVLAGGAEGDLQKLLKQRFTKVANVKPPASRPDSSEKFVIATGFR 238
>gi|312114414|ref|YP_004012010.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodomicrobium vannielii
ATCC 17100]
gi|311219543|gb|ADP70911.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodomicrobium vannielii
ATCC 17100]
Length = 240
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 138/227 (60%), Gaps = 1/227 (0%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
M K + R + K R S R WL R +NDPYV A+ +G+R+R+AYKL +I E
Sbjct: 1 MTKREQNPDRSFKIKLKKTRGRTASQRQWLERQLNDPYVAAAKRDGYRSRAAYKLEEIAE 60
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
K+ +L+ +VDLG++PG WSQVAA + VVA+D LD + I GV + DF
Sbjct: 61 KYGLLKPGDIVVDLGAAPGGWSQVAANRVKAADGRGAVVALDYLDFDAIPGVTILQQDFT 120
Query: 121 DLDSWEFIRQAIGG-NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
D + + + G P+ VLSDMA PT GHR+ DHLR M L E A FA+ ++ GG F
Sbjct: 121 DPVADGRLLDMLAGRRPNAVLSDMAAPTTGHRQTDHLRIMGLAEEALAFAVRVMAPGGFF 180
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L K FQGG+ +L +LK+ F V H+KP ASRAES E+++LA GFR
Sbjct: 181 LSKVFQGGSEKSLLDVLKRDFATVRHIKPKASRAESPELYVLATGFR 227
>gi|296283049|ref|ZP_06861047.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Citromicrobium
bathyomarinum JL354]
Length = 226
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 141/221 (63%), Gaps = 5/221 (2%)
Query: 7 SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
S SR ++VK R SS WL R +NDPYV+ A+ G+R+R+A+KL++++EK IL
Sbjct: 2 SRSRGDPQKRVKTARGRTASSNRWLERQLNDPYVREAKAAGYRSRAAFKLIELDEKFGIL 61
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ RIVDLG +PG WSQ+A + +V ID+L EP+ GV + DF+ ++
Sbjct: 62 RGAERIVDLGIAPGGWSQIAQKKRP----QATIVGIDLLPTEPLDGVTILEMDFMADEAP 117
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
E I +GG PDLV+SDMA T+GH++ DHLRTM L E A FA++ L GG FL K
Sbjct: 118 ETIMGHLGGPPDLVMSDMAANTVGHKQTDHLRTMGLVETAADFAIQTLAPGGQFLAKVLA 177
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GGT +L LLKK+F+ V H KP ASR S E +++A+GF+
Sbjct: 178 GGTDAQLLALLKKNFKTVKHAKPPASRKGSSEWYVVAQGFK 218
>gi|84687207|ref|ZP_01015088.1| ribosomal RNA large subunit methyltransferase J [Maritimibacter
alkaliphilus HTCC2654]
gi|84664795|gb|EAQ11278.1| ribosomal RNA large subunit methyltransferase J [Rhodobacterales
bacterium HTCC2654]
Length = 238
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 151/237 (63%), Gaps = 11/237 (4%)
Query: 1 MVKPPG-----SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M KPPG +R L KVK+ R + SS WL R +NDPYV+RA+ EG+R R+A+K
Sbjct: 1 MTKPPGKKNASGRGQRDLRVKVKSARGRKLSSTRWLERQLNDPYVKRARDEGYRGRAAFK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPI 109
+L+I+EK + L R+VDLG +PG W QVA V+ +D+ ++EP+
Sbjct: 61 ILEIDEKFRFLVPGARVVDLGCAPGGWLQVAVERVNALGEKKGTKVGTVLGVDLQEVEPV 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G + ++ DF++ D+ E +++ +GG D+V+SDMA + GH++ DHLR ++LCE A +FA
Sbjct: 121 AGAEAYQLDFMEDDADEKVKEWLGGKADVVMSDMAAASSGHKQTDHLRIIALCETAAYFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG D+ LLK+ F KV+++KP ASR++S E F++A GFR
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEGDLQKLLKQKFTKVVNIKPPASRSDSSEKFVVATGFR 237
>gi|254705826|ref|ZP_05167654.1| Ribosomal RNA large subunit methyltransferase J [Brucella
pinnipedialis M163/99/10]
gi|261313253|ref|ZP_05952450.1| ribosomal RNA large subunit methyltransferase J [Brucella
pinnipedialis M163/99/10]
gi|261302279|gb|EEY05776.1| ribosomal RNA large subunit methyltransferase J [Brucella
pinnipedialis M163/99/10]
Length = 232
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 110/210 (52%), Positives = 156/210 (74%), Gaps = 2/210 (0%)
Query: 12 GLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
L +VK + + + SSR WL RH+NDPYV +++ +G+R+R+AYKL++IN+++ +L+ +
Sbjct: 23 NLHVRVKKKAGTIKESSRRWLERHLNDPYVHKSRQDGYRSRAAYKLIEINDRYNLLKKGQ 82
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
+I+DLG++PG WSQ+AARI GS N +VV ID L ++P+ GV + DFLD ++ + +
Sbjct: 83 KIIDLGAAPGGWSQIAARIVGSTDENPQVVGIDYLHVDPLPGVILLEMDFLDDEAPQKLM 142
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
A+G PDLV+SDMA PT GHR+ DHLRT+ LCE A FA+ +L GG FL KTFQGGT
Sbjct: 143 DALGDKPDLVISDMAAPTTGHRRTDHLRTVHLCEVAADFAVSVLKPGGHFLTKTFQGGTE 202
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMF 219
N++L LLK+ F+ V HVKP ASRAESVE++
Sbjct: 203 NELLALLKQKFRSVHHVKPPASRAESVELY 232
>gi|163797468|ref|ZP_02191419.1| 23S rRNA methylase [alpha proteobacterium BAL199]
gi|159177217|gb|EDP61776.1| 23S rRNA methylase [alpha proteobacterium BAL199]
Length = 251
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 98/218 (44%), Positives = 140/218 (64%), Gaps = 2/218 (0%)
Query: 10 RRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN 68
R + +VK R SS+ WL R +NDP+V ++ G+R+R+A+KL+Q+NE+ L+
Sbjct: 29 SRQVFVRVKTARGRTASSQRWLERQLNDPFVAESKRLGYRSRAAFKLIQLNERFNFLRPG 88
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
R+VDLG++PG W+Q++ G+ VV +DIL +EPI G + DF+ D+ + I
Sbjct: 89 ARVVDLGAAPGGWTQISVDRVGA-PGRGLVVGLDILPVEPIAGATLIEADFMADDAPQQI 147
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
+ A GG D+VLSDMA T GH + DHLR + LCEAA FALE+L G F+ K FQGG+
Sbjct: 148 KAATGGLVDVVLSDMAAQTTGHPQTDHLRIVGLCEAAFEFALEVLAPEGTFVAKVFQGGS 207
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L +K+ F+ V H KP ASRAES E +++A GFR
Sbjct: 208 ETAMLARMKRAFKAVRHAKPPASRAESAETYVVATGFR 245
>gi|217977510|ref|YP_002361657.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylocella silvestris
BL2]
gi|217502886|gb|ACK50295.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylocella silvestris
BL2]
Length = 237
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 104/228 (45%), Positives = 144/228 (63%), Gaps = 6/228 (2%)
Query: 5 PGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
G R L +VK R SS WL R +NDPYV +A+ EG+R+R+AYKL++I+++
Sbjct: 6 SGREGGRSLKTRVKTARKRTLSSTLWLQRQLNDPYVAQAKREGFRSRAAYKLIEIDDRFH 65
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNT-----RVVAIDILDMEPILGVKFFKFD 118
L+ ++I+DLG++PG WSQVAA TG+ R++ ID+L +E + G +F D
Sbjct: 66 FLRPGQKIIDLGAAPGGWSQVAAVRTGAAQGEGQTGRARIIGIDLLPIETLPGAEFKVMD 125
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
FL+ ++ + + +GG D+VLSDMA GH+K DHLR + L E A FA E L GG
Sbjct: 126 FLEPEAPRLLTEWLGGKADVVLSDMAANATGHKKTDHLRIVGLVELAGDFACEALAPGGA 185
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL K QGGT N +L LK+ F V HVKP ASRA+S E+++LA GFR
Sbjct: 186 FLAKVLQGGTENVLLAKLKRDFAVVRHVKPQASRADSSELYVLATGFR 233
>gi|49473815|ref|YP_031857.1| cell division protein ftsJ [Bartonella quintana str. Toulouse]
gi|81647276|sp|Q6G0S9|RLME_BARQU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|49239318|emb|CAF25648.1| Cell division protein ftsJ [Bartonella quintana str. Toulouse]
Length = 241
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 112/223 (50%), Positives = 156/223 (69%), Gaps = 2/223 (0%)
Query: 6 GSSSRRGLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
G S L Q+VK + + + SSR WL RH+NDPYV +++++G+R+R+AYKL+++NE+++
Sbjct: 13 GGSGSHKLYQRVKKKAGTIKASSRRWLERHLNDPYVHQSKVDGYRSRAAYKLIEMNERYK 72
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
L+ ++I+DLG++PG W QVA RI GS+ VV ID L + P+ GV + DFL D
Sbjct: 73 FLKKGQKIIDLGAAPGGWCQVAQRIVGSSDEKPSVVGIDYLPVVPLPGVIMLEMDFLHTD 132
Query: 124 SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ + + A+G PD+VLSDMA PT GHR+ D+LRT LCE A FAL +L GG FLVK
Sbjct: 133 APQKLIDALGTKPDVVLSDMAAPTTGHRQTDYLRTTYLCEVAADFALSVLKSGGHFLVKA 192
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FQGG N +L LK++F+ V HVKP ASR ESVE++LLA F+
Sbjct: 193 FQGGAENTLLTTLKQNFKTVHHVKPPASRTESVELYLLALEFK 235
>gi|110680244|ref|YP_683251.1| ribosomal RNA large subunit methyltransferase, putative
[Roseobacter denitrificans OCh 114]
gi|123361756|sp|Q164M8|RLME_ROSDO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|109456360|gb|ABG32565.1| ribosomal RNA large subunit methyltransferase, putative
[Roseobacter denitrificans OCh 114]
Length = 240
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 147/237 (62%), Gaps = 11/237 (4%)
Query: 1 MVKPPG-----SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K PG +R L KVK R + SS WL R +NDPYV+RA+ EG+R R+AYK
Sbjct: 1 MAKKPGSQNTSGRGQRDLKVKVKTARGRKLSSTRWLQRQLNDPYVKRARSEGYRGRAAYK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPI 109
+L+++++ + L R+VDLG +PG W QVA + + V+ +D+ +MEPI
Sbjct: 61 ILELDDRFRFLVPGARVVDLGCAPGGWCQVAVKRVNALGERTSKAQGSVLGVDLQEMEPI 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G ++ DF+ D+ E +R +GG D+V+SDMA + GH++ DHLR ++LCEAA +FA
Sbjct: 121 AGATLYQLDFMADDADEQVRVWLGGKADVVMSDMAASSSGHKQTDHLRIIALCEAAAYFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG ++ LLK+ F KV ++KP ASR +S E F++A GFR
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEGELQKLLKQRFAKVANIKPPASRQDSSEKFVVATGFR 237
>gi|83591585|ref|YP_425337.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodospirillum rubrum
ATCC 11170]
gi|123527542|sp|Q2RXU5|RLME_RHORT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83574499|gb|ABC21050.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodospirillum rubrum
ATCC 11170]
Length = 263
Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 145/227 (63%), Gaps = 2/227 (0%)
Query: 2 VKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
V+ + R L +V+ + + SS WL R +NDPYV A+ +G R+R+A+KL++++E
Sbjct: 24 VRGSAPTGSRDLFVRVRTAKGRKASSTRWLQRQLNDPYVLEAKRQGLRSRAAFKLIELDE 83
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGS-NANNTRVVAIDILDMEPILGVKFFKFDF 119
+ +L+ R+VDLG++PG W+Q+A T S + N +VV +DIL+ E + G DF
Sbjct: 84 RFTLLKPGMRVVDLGAAPGGWTQIAVERTRSLHPNGGKVVGMDILEWEGVAGATCLTHDF 143
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+D + ++ A+ G DLVLSDMA PT GHR+ DHLR M L EAA +FA E+L GG F
Sbjct: 144 MDDAAPLMLKGAMDGAVDLVLSDMAAPTTGHRQTDHLRVMGLAEAAWYFAEEVLAPGGAF 203
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K FQGGT +L +KK + + H KP ASR S E++++A+GFR
Sbjct: 204 VCKVFQGGTEGALLTRMKKMCEVIRHAKPPASRQGSPEVYVIAQGFR 250
>gi|319899272|ref|YP_004159365.1| cell division protein ftsJ [Bartonella clarridgeiae 73]
gi|319403236|emb|CBI76795.1| cell division protein ftsJ [Bartonella clarridgeiae 73]
Length = 238
Score = 208 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 111/216 (51%), Positives = 153/216 (70%), Gaps = 2/216 (0%)
Query: 13 LTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR 70
L Q+VK R + + SSR WL RH+NDPYV +++++G+R+RSAYKL++I+E+++I + ++
Sbjct: 18 LYQRVKKRAGTIKASSRRWLERHLNDPYVHQSKVDGYRSRSAYKLIEIDERYKIFKKGQK 77
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
I+DLG++PG W QVAA S+ VV ID L M+P+ GV + DFL ++ + +
Sbjct: 78 IIDLGAAPGGWCQVAAHKVESSDQKPSVVGIDYLPMDPLPGVVVLEMDFLHENAPQKLMN 137
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
A+G PD+VLSDMA PT GHR+ DHLRT+ LCE A FAL L GG FL K FQGG N
Sbjct: 138 ALGEQPDIVLSDMAAPTTGHRQTDHLRTVYLCEMAADFALSFLKSGGHFLAKAFQGGAEN 197
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L LK++F+ V HVKP ASRAESVE++LLA F+
Sbjct: 198 ILLTKLKQNFKTVHHVKPPASRAESVELYLLALEFK 233
>gi|254464047|ref|ZP_05077458.1| ribosomal RNA large subunit methyltransferase J [Rhodobacterales
bacterium Y4I]
gi|206684955|gb|EDZ45437.1| ribosomal RNA large subunit methyltransferase J [Rhodobacterales
bacterium Y4I]
Length = 238
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 96/237 (40%), Positives = 151/237 (63%), Gaps = 11/237 (4%)
Query: 1 MVKPPG-----SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K P +R L KVK R + SS WL R +NDPYV+RAQ EG+R R+AYK
Sbjct: 1 MAKTPTGKNTSGRGQRDLKVKVKTARGRKLSSTRWLQRQLNDPYVKRAQAEGYRGRAAYK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPI 109
++++++K + L + R+VDLG +PG W+QVA + R++ +D+ ++EP+
Sbjct: 61 IMELDDKFRFLVNGARVVDLGCAPGGWAQVAVKRINALGEKPGKAVGRIIGVDLQEVEPL 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G +F + DF+D + + +++ +GG D+V+SDMA + GH++ DHLR +SLCE A +FA
Sbjct: 121 AGAEFHQLDFMDEGADDQVKEWLGGKADVVMSDMAAASSGHKQTDHLRIISLCETAAYFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG ++ LLK+ F KV+++KP +SR++S E F++A GFR
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEGELQKLLKQKFTKVMNMKPPSSRSDSSEKFVVAMGFR 237
>gi|83942234|ref|ZP_00954695.1| ribosomal RNA large subunit methyltransferase J [Sulfitobacter sp.
EE-36]
gi|83955469|ref|ZP_00964100.1| ribosomal RNA large subunit methyltransferase J [Sulfitobacter sp.
NAS-14.1]
gi|83840113|gb|EAP79288.1| ribosomal RNA large subunit methyltransferase J [Sulfitobacter sp.
NAS-14.1]
gi|83846327|gb|EAP84203.1| ribosomal RNA large subunit methyltransferase J [Sulfitobacter sp.
EE-36]
Length = 262
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 147/230 (63%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R L KVK+ R + SS WL R +NDPYV+RA EG+R R+AYK++++++K
Sbjct: 23 KNTSGRGQRDLKVKVKSARGRKLSSTRWLQRQLNDPYVKRANAEGYRGRAAYKIMELDDK 82
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
++ L R+VDLG++PG W QVA + N ++ ID+ +MEPI G + +
Sbjct: 83 YRFLVPGARVVDLGAAPGGWCQVAVKRCNVLGEKKGKNVGTILGIDLQEMEPIAGCELHQ 142
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF++ D+ E ++ +GG D+V+SDMA + GH++ DH R ++LCEAA +FA ++L G
Sbjct: 143 LDFMEDDADEIVKGWLGGKADVVMSDMAASSSGHKQTDHNRIIALCEAAAYFAFDVLEDG 202
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG D+ LLK+ F KV ++KP ASR++S E F++A GF+
Sbjct: 203 GTFVAKVLAGGAEGDLQQLLKRRFTKVANIKPPASRSDSSEKFVVATGFK 252
>gi|103488231|ref|YP_617792.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingopyxis alaskensis
RB2256]
gi|123379512|sp|Q1GPG3|RLME_SPHAL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|98978308|gb|ABF54459.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingopyxis alaskensis
RB2256]
Length = 230
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 140/215 (65%), Gaps = 5/215 (2%)
Query: 13 LTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRI 71
L +VK + SS WL R +NDPYV+RAQ EG+R+R+AYKL++++EK +L+ +R +
Sbjct: 14 LHVRVKTAKRRSVSSTRWLQRQLNDPYVRRAQAEGYRSRAAYKLIELDEKFGLLKKSRAV 73
Query: 72 VDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
VDLG +PG WSQV + RV ID+L EPI GV + DF+D + + + A
Sbjct: 74 VDLGIAPGGWSQVVRKANPR----ARVAGIDLLPCEPIEGVAILEMDFMDDAAPDALIAA 129
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+GG PDLV+SDMA T+GH + DHLRT+ L E A FA+ L GG F+ K F GG +
Sbjct: 130 LGGAPDLVISDMAANTVGHPQTDHLRTIGLAETAADFAVRNLLPGGAFVAKVFAGGADRE 189
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L LLK+HF V H KP ASR S E++++A+GF+
Sbjct: 190 LLTLLKRHFTTVKHAKPPASRKGSPELYVIAQGFK 224
>gi|149915184|ref|ZP_01903712.1| ribosomal RNA large subunit methyltransferase, putative
[Roseobacter sp. AzwK-3b]
gi|149810905|gb|EDM70744.1| ribosomal RNA large subunit methyltransferase, putative
[Roseobacter sp. AzwK-3b]
Length = 238
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 143/230 (62%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K R LT KVK R + SS WL R +NDPYVQRAQ EG+R R+AYK++++++K
Sbjct: 8 KNTSGRGLRDLTVKVKTARGRKASSTRWLQRQLNDPYVQRAQAEGYRGRAAYKIMELDDK 67
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
+ L R+VDLG +PG W QVA S ++ ID+ ++EPI G +
Sbjct: 68 FRFLVPGARVVDLGCAPGGWCQVAVPRINALGDKSGKAQGFILGIDLQEVEPIAGCVLKQ 127
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF+ D+ +++ +GG D+V+SDMA + GH++ DHLR ++LCEAA + A ++L+ G
Sbjct: 128 LDFMADDADVLVKEWLGGKADVVMSDMAAASSGHKQTDHLRIIALCEAAAYLAFDVLDEG 187
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG ++ LLK+ F KV +VKP ASRA+S E F++A GF+
Sbjct: 188 GTFVSKVLAGGAEGELQKLLKQRFTKVANVKPPASRADSSEKFVVATGFK 237
>gi|114327810|ref|YP_744967.1| methyltransferase [Granulibacter bethesdensis CGDNIH1]
gi|122327225|sp|Q0BT08|RLME_GRABC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114315984|gb|ABI62044.1| methyltransferase [Granulibacter bethesdensis CGDNIH1]
Length = 230
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 90/226 (39%), Positives = 136/226 (60%), Gaps = 8/226 (3%)
Query: 2 VKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
+PP RG +K R +S+ WL R +NDPYV A+ +GWR+R+A+KL+++++
Sbjct: 6 TQPPTGP--RGKVVMLKTARKRSVASQRWLTRQLNDPYVAAAKAQGWRSRAAFKLIELDD 63
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
K ++ R++DLG++PG W+QVA + VV +D+L ++P+ G + DF
Sbjct: 64 KFGLISKGSRVIDLGAAPGGWTQVAMKR-----GAAVVVGVDLLPVDPVPGATLIQGDFN 118
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
D D + +GG DLV+SDMA T GH DH+R ++L E A FA + L GG F+
Sbjct: 119 DDDMPARLSSLMGGKADLVMSDMAPNTTGHAATDHMRIIALTELALHFAFDALAPGGAFV 178
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K FQGG+ +L +K+ F V H KP +SR ES E++++AKGFR
Sbjct: 179 AKVFQGGSEKQLLEPMKQRFASVRHAKPASSRKESSELYVVAKGFR 224
>gi|99081023|ref|YP_613177.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ruegeria sp. TM1040]
gi|123077672|sp|Q1GHF1|RLME_SILST RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|99037303|gb|ABF63915.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ruegeria sp. TM1040]
Length = 238
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 150/237 (63%), Gaps = 11/237 (4%)
Query: 1 MVKPP-----GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K P +R LT KVK R + SS WL R +NDPYV+RAQ EG+R R+A+K
Sbjct: 1 MAKKPTGKNTSGRGQRDLTVKVKTARGRRLSSTRWLQRQLNDPYVKRAQAEGYRGRAAFK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPI 109
++++++K++ L R+VDLG +PG W+QVA S R + ID+ ++EP+
Sbjct: 61 IMELDDKYRFLVPGARVVDLGCAPGGWAQVAVPRINALGEKSGKAIGRFIGIDLQEVEPL 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G +F + DF+D + + +++ +GG D+V+SDMA + GH++ DHLR MSLCE A +FA
Sbjct: 121 AGAEFHQLDFMDEGADDQVKEWLGGQADVVMSDMAASSSGHKQTDHLRIMSLCETAAYFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG ++ LLK+ F+ V +VKP +SRA+S E F++A GFR
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEGELQKLLKQKFKSVANVKPPSSRADSSEKFVVATGFR 237
>gi|89068308|ref|ZP_01155718.1| ribosomal RNA large subunit methyltransferase J [Oceanicola
granulosus HTCC2516]
gi|89046225|gb|EAR52283.1| ribosomal RNA large subunit methyltransferase J [Oceanicola
granulosus HTCC2516]
Length = 236
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 102/235 (43%), Positives = 148/235 (62%), Gaps = 9/235 (3%)
Query: 1 MVKPP---GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLL 56
M K +R LT KVK R + SS WL R +NDPYV+RA+ +G+R R+AYK+L
Sbjct: 1 MAKKTRKSSGRGQRDLTVKVKTARGRKLSSTLWLQRQLNDPYVKRAKADGYRGRAAYKIL 60
Query: 57 QINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN-----TRVVAIDILDMEPILG 111
++++K++ L R+VDLG +PG W QVA R T + +V+ ID+ ++EPI G
Sbjct: 61 ELDDKYRFLVPGARVVDLGCAPGGWCQVAVRRTNALGERSDKAVGKVLGIDLQEVEPIAG 120
Query: 112 VKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
+ + DFL D+ E ++ + G D+V+SDMA GH++ DHLR ++LCEAA +FA +
Sbjct: 121 AEIHQLDFLADDADEQVKDWLAGPADVVMSDMAASASGHKQTDHLRIVALCEAAAYFAFD 180
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L GG F+ K GG + LLK+ F KV++VKP ASRA+S E F++A GFR
Sbjct: 181 VLVEGGTFVAKVLAGGAEGSLQTLLKQRFTKVVNVKPPASRADSSEKFVVATGFR 235
>gi|259418917|ref|ZP_05742834.1| ribosomal RNA large subunit methyltransferase J [Silicibacter sp.
TrichCH4B]
gi|259345139|gb|EEW56993.1| ribosomal RNA large subunit methyltransferase J [Silicibacter sp.
TrichCH4B]
Length = 238
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 99/237 (41%), Positives = 150/237 (63%), Gaps = 11/237 (4%)
Query: 1 MVKPP-----GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K P +R LT KVK R + SS WL R +NDPYV+RAQ EG+R R+A+K
Sbjct: 1 MAKKPTGKNTSGRGQRDLTVKVKTARGRRLSSTRWLQRQLNDPYVKRAQAEGYRGRAAFK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPI 109
++++++K++ L R+VDLG +PG W+QVA S R + +D+ ++EP+
Sbjct: 61 IMELDDKYRFLVPGARVVDLGCAPGGWAQVAVPRINALGEKSGKAIGRFIGVDLQEVEPL 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G +F + DF+D + + +++ +GG D+V+SDMA + GH++ DHLR MSLCE A +FA
Sbjct: 121 AGAEFHQLDFMDEGADDQVKEWLGGQADVVMSDMAASSSGHKQTDHLRIMSLCETAAYFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG ++ LLK+ F+ V +VKP +SRA+S E F++A GFR
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEGELQKLLKQKFKSVANVKPPSSRADSSEKFVIATGFR 237
>gi|119386697|ref|YP_917752.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paracoccus denitrificans
PD1222]
gi|143460965|sp|A1B962|RLME_PARDP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|119377292|gb|ABL72056.1| 23S rRNA Um-2552 2'-O-methyltransferase [Paracoccus denitrificans
PD1222]
Length = 256
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 93/230 (40%), Positives = 145/230 (63%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
+ +R L +VK+ + + SS WL R +NDPYV RA+ EG+R R+AYK+L++++K
Sbjct: 11 RKSSGRGQRDLRVRVKSAKGRKLSSTLWLERQLNDPYVARAKREGYRGRAAYKILELDDK 70
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
++ L R+VDLG +PG W QVA S RV+ +D+ +++PI G + +
Sbjct: 71 YRFLVPGARVVDLGCAPGGWCQVAVARVNALGDKSGKKVGRVLGVDLQEVDPIPGAEIHQ 130
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DFL + E ++ +GG D+V+SDMA + GH+ DHLR ++L EAA A ++L G
Sbjct: 131 LDFLSEGADEQVKAWLGGRADVVMSDMAAASSGHKGTDHLRIVALVEAAAQLAFDVLEPG 190
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG N++ +LK++F+KV +VKP ASR++S E F++A+GFR
Sbjct: 191 GTFVAKVLAGGAENEMQAMLKRNFRKVANVKPPASRSDSSEKFVVAQGFR 240
>gi|254460971|ref|ZP_05074387.1| ribosomal RNA large subunit methyltransferase J [Rhodobacterales
bacterium HTCC2083]
gi|206677560|gb|EDZ42047.1| ribosomal RNA large subunit methyltransferase J [Rhodobacteraceae
bacterium HTCC2083]
Length = 244
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 98/237 (41%), Positives = 149/237 (62%), Gaps = 11/237 (4%)
Query: 1 MVKPP-----GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K P +R LT KVK+ R + SS WL R +NDPYV+RAQ EG+R R+A+K
Sbjct: 1 MAKTPTGKNNSGRGQRDLTVKVKSARGRRMSSTLWLQRQLNDPYVKRAQAEGYRGRAAFK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN-----TRVVAIDILDMEPI 109
++++++K++ L R+VDLG +PG W QVA + + ++ IDI ++E +
Sbjct: 61 IMELDDKYRFLVPGARVVDLGCAPGGWCQVAVPRINALGDRRGKSVGTLLGIDIQEVETM 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G +F DFLD + + +++ +GG D+V+SDMA + GH++ DHLR M LCE A +FA
Sbjct: 121 AGAEFHVLDFLDEGADDKVKEWLGGEADVVMSDMAASSSGHKQTDHLRIMHLCETAAYFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG D+ LLK++F KV H+KP +SR++S E F++A GF+
Sbjct: 181 FDVLAEGGTFVAKVLAGGAEGDLQKLLKQNFTKVAHMKPPSSRSDSSEKFVVATGFK 237
>gi|254486645|ref|ZP_05099850.1| ribosomal RNA large subunit methyltransferase J [Roseobacter sp.
GAI101]
gi|214043514|gb|EEB84152.1| ribosomal RNA large subunit methyltransferase J [Roseobacter sp.
GAI101]
Length = 251
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 97/230 (42%), Positives = 145/230 (63%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R L KVK+ R + SS WL R +NDPYV+RA EG+R R+AYK++++++K
Sbjct: 13 KNTSGRGQRDLKVKVKSARGRKLSSTRWLQRQLNDPYVKRANAEGYRGRAAYKIMELDDK 72
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFK 116
+ L RIVDLG++PG W QVA + N ++ ID+ +MEPI G + +
Sbjct: 73 FRFLVPGARIVDLGAAPGGWCQVAVKRCNVLGEKQGKNVGTILGIDLQEMEPIAGCELHQ 132
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF++ D+ E ++ +GG D+V+SDMA + GH++ DH R ++LCEAA +FA ++L G
Sbjct: 133 LDFMEDDADEIVKGWLGGKADVVMSDMAASSSGHKQTDHNRIIALCEAAAYFAFDVLEDG 192
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG D+ LLK+ F KV ++KP ASR +S E F++A GF+
Sbjct: 193 GTFVAKVLAGGAEGDLQKLLKRRFTKVSNIKPPASRQDSSEKFVVATGFK 242
>gi|209963501|ref|YP_002296416.1| ribosomal RNA large subunit methyltransferase J,RrmJ
[Rhodospirillum centenum SW]
gi|209956967|gb|ACI97603.1| ribosomal RNA large subunit methyltransferase J,RrmJ
[Rhodospirillum centenum SW]
Length = 227
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 138/214 (64%), Gaps = 2/214 (0%)
Query: 15 QKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVD 73
+VK SS WL R +NDPYV A+ G+R+R+A+KLLQ++EK L+ +RIVD
Sbjct: 1 MRVKTAHRRSLSSTRWLERQLNDPYVAEARKRGYRSRAAFKLLQLDEKFHFLRRGQRIVD 60
Query: 74 LGSSPGSWSQVAARITGSN-ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
LG++PG W+QVA + + +VV +D+L++EP+ G + DFLD + + +++ +
Sbjct: 61 LGAAPGGWTQVAVAVVKPGEGSTGKVVGLDLLEVEPVPGATIIQLDFLDASAPDRLKELL 120
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG D+VLSDMA T GH DHLR + L EAA FA ++L GG F+ K FQGG T +
Sbjct: 121 GGQADIVLSDMAANTTGHPATDHLRIIGLAEAAYDFAADVLAPGGAFVCKLFQGGATKGL 180
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L LLK+ F V H KP ASRA+S E +++A GFR
Sbjct: 181 LDLLKRDFATVRHAKPPASRADSSETYVVATGFR 214
>gi|319407620|emb|CBI81272.1| cell division protein ftsJ [Bartonella sp. 1-1C]
Length = 240
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 112/216 (51%), Positives = 154/216 (71%), Gaps = 2/216 (0%)
Query: 13 LTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR 70
L Q+VK + + + SSR WL RH+NDPYV +++++G+R+RSAYKL++I+E+++I + ++
Sbjct: 18 LYQRVKKKAGTIKASSRRWLERHLNDPYVHQSKVDGYRSRSAYKLIEIDERYKIFKKGQK 77
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
I+DLG++PG W QVAAR S+ VV ID L M+P+ GV + DFL ++ +
Sbjct: 78 IIDLGAAPGGWCQVAARKVESSNQKPSVVGIDYLPMDPLPGVVVLEMDFLHENAPRKLMN 137
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
A+G PD+VLSDMA PT GHRK DHLRT+ LCE A FAL +L GG FL K FQGG N
Sbjct: 138 ALGEQPDIVLSDMAAPTTGHRKTDHLRTVYLCEMAADFALSVLKSGGHFLAKAFQGGAEN 197
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L LK++F+ V HVKP ASRAESVE++LLA F+
Sbjct: 198 TLLTTLKQNFKTVHHVKPPASRAESVELYLLALEFK 233
>gi|163746305|ref|ZP_02153663.1| ribosomal RNA large subunit methyltransferase J [Oceanibulbus
indolifex HEL-45]
gi|161380190|gb|EDQ04601.1| ribosomal RNA large subunit methyltransferase J [Oceanibulbus
indolifex HEL-45]
Length = 241
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 97/230 (42%), Positives = 146/230 (63%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R L KVK+ R + SS WL R +NDPYV+RAQ EG+R R+AYK++++++K
Sbjct: 8 KNTSGRGQRDLKVKVKSARGRKLSSTRWLQRQLNDPYVKRAQAEGYRGRAAYKIMELDDK 67
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFK 116
+ L RIVDLG++PG W QVA + S ++ +D+ +MEPI G + +
Sbjct: 68 FRFLVPGARIVDLGAAPGGWCQVAVKRCNVLGERSGKQVGTILGVDLQEMEPIAGCELHQ 127
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF++ D+ +++ +GG D+V+SDMA GH++ DHLR ++LCEAA +FA ++L G
Sbjct: 128 LDFMEDDADLKVKEWLGGKADVVMSDMAASASGHKQTDHLRIIALCEAAAYFAFDVLEDG 187
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG ++ LLK F KV ++KP ASRA+S E F++A GF+
Sbjct: 188 GTFVAKVLAGGAEGELQKLLKMRFTKVANIKPPASRADSSEKFVVATGFK 237
>gi|330994695|ref|ZP_08318618.1| Ribosomal RNA large subunit methyltransferase E [Gluconacetobacter
sp. SXCC-1]
gi|329758336|gb|EGG74857.1| Ribosomal RNA large subunit methyltransferase E [Gluconacetobacter
sp. SXCC-1]
Length = 254
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 91/226 (40%), Positives = 134/226 (59%), Gaps = 6/226 (2%)
Query: 2 VKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
+ + R T VK R + WL R +NDPYVQ AQ +GWR+R+A+KL+++++
Sbjct: 27 TDGQAARTNRTKTVTVKKARGRTTAQHRWLQRQLNDPYVQAAQKQGWRSRAAFKLIELDD 86
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
+ +++ R+VDLG++PG W+QVA + VV +D+L ++P+ G + DF
Sbjct: 87 RFHLIRPGTRVVDLGAAPGGWTQVAVKR-----GAAEVVGVDLLPVDPVPGATVIEGDFN 141
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
D D + + +GG DLV+SDMA T GH DHLR + L E A FA +L G F+
Sbjct: 142 DPDMPDRLTGLLGGRADLVMSDMAPNTTGHAPTDHLRIIGLAELALHFATRILAPDGAFV 201
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K FQGG+ +L LK+ F +V H KP ASR ES E++++A GFR
Sbjct: 202 AKVFQGGSEKQMLADLKRLFTQVRHAKPPASRKESSELYVVATGFR 247
>gi|295689972|ref|YP_003593665.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Caulobacter segnis ATCC
21756]
gi|295431875|gb|ADG11047.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Caulobacter segnis ATCC
21756]
Length = 235
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 93/229 (40%), Positives = 138/229 (60%), Gaps = 8/229 (3%)
Query: 1 MVKPPGSSSRRGLTQKVKNR---SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
MVKPP S G + + + S + WL R INDP+ +A+ G+R+R+A+K+ +
Sbjct: 10 MVKPPTGGSEGGRGKPARLKTAYGRTPSQQAWLERQINDPFSAKARALGYRSRAAFKISE 69
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I+EK + R++DLG +PG W Q+A T + ID+L ++P+ +
Sbjct: 70 IDEKFHFFRKGARVIDLGCAPGGWLQIAVER-----GVTDLAGIDLLPVDPVAPAHILEM 124
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DF + E + + +GG PDLV+SDMA T+GHR+ DHLR + L E A FA+++L GG
Sbjct: 125 DFTADGAPEKLMEILGGEPDLVMSDMAPNTVGHRETDHLRIVGLIEIAAEFAVDVLKPGG 184
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K FQGG T +++ LK+HF KV H KP ASR +S E+FL+A GF+
Sbjct: 185 AFVAKAFQGGETAEVIGKLKRHFTKVQHFKPKASRQDSSEVFLVATGFK 233
>gi|170746591|ref|YP_001752851.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
radiotolerans JCM 2831]
gi|170653113|gb|ACB22168.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacterium
radiotolerans JCM 2831]
Length = 241
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 108/215 (50%), Positives = 149/215 (69%), Gaps = 4/215 (1%)
Query: 13 LTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRI 71
L Q+VK R S + WL R +NDPYV RA+ EG+R+R+AYKLL+I+E++++L+ ++I
Sbjct: 18 LKQRVKTGRGRTLSQKRWLERQLNDPYVARAKREGYRSRAAYKLLEIDERYKLLRPGQKI 77
Query: 72 VDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
VDLG++PG WSQVAAR+ G RVV ID+L++EP+ GV+F DFLD ++ + +
Sbjct: 78 VDLGAAPGGWSQVAARVVGPT---GRVVGIDLLEIEPMAGVEFITLDFLDPEAPDRLTGM 134
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+GG DLV+SDMA GH+K DHLR + L E A FA E+L GG +L K QGGT
Sbjct: 135 LGGPADLVMSDMAANATGHKKTDHLRIIGLAETAAEFAREILGPGGAYLAKVLQGGTEGA 194
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L LK+ F V HVKP ASRA+S E+++LA G+R
Sbjct: 195 LLTDLKRDFATVRHVKPAASRADSSELYVLATGYR 229
>gi|189040697|sp|B0T8J6|RLME_CAUSK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
Length = 226
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 140/229 (61%), Gaps = 8/229 (3%)
Query: 1 MVKPPGSSSRRGLTQKVKNR---SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
MVKPP + G + + + S + WL R INDP+ +A+ G+R+R+A+K+ +
Sbjct: 1 MVKPPAGGNDGGRAKPARLKTAFGRTPSQQAWLERQINDPFSAKARALGYRSRAAFKISE 60
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I++K++ + +++DLG +PG W Q+A T +V +D+L ++P+ +
Sbjct: 61 IDDKYRFFKKGAKVIDLGCAPGGWLQMATER-----GVTDIVGVDLLPVDPVAPAHILEM 115
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DF D + + +GG PDLV+SDMA T+GHR+ DHLR + L E FA+E+L GG
Sbjct: 116 DFTDPACPPKMLELLGGAPDLVMSDMAPNTVGHRETDHLRIVGLIEIGADFAIEVLKPGG 175
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K FQGG T ++ LKKHF KV+H KP ASR++S E+FL+A GF+
Sbjct: 176 AFVAKAFQGGETAAVIAQLKKHFTKVVHFKPKASRSDSSEVFLVATGFK 224
>gi|254420188|ref|ZP_05033912.1| ribosomal RNA large subunit methyltransferase J [Brevundimonas sp.
BAL3]
gi|196186365|gb|EDX81341.1| ribosomal RNA large subunit methyltransferase J [Brevundimonas sp.
BAL3]
Length = 224
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 92/229 (40%), Positives = 142/229 (62%), Gaps = 8/229 (3%)
Query: 1 MVKPPGSSS--RRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
MVKPP + RG+ K+K + SS+ W+ R + D + ++A+ EGWR+R+A+KL++
Sbjct: 1 MVKPPTGGTAAGRGMGTKMKTADTKSMSSQQWIKRQLADKWSEKARAEGWRSRAAFKLIE 60
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I++K +++ +++DLG++PG W QVA V +D+L +EPI G +
Sbjct: 61 IDDKFHLIKRGSKVIDLGAAPGGWIQVAVNR-----GAGAVAGVDLLMIEPIPGSTLLQA 115
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DF + + AIGG PDLVLSDMA+ T+GHR+ DHL+ ++L E A FA+ L GG
Sbjct: 116 DFTHPGVDQQLIDAIGGAPDLVLSDMAHNTVGHRQTDHLKIIALIEIAADFAIRTLRPGG 175
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+F+ K FQGG +L L++ F+ V +VKP +SR +S E+FL+A R
Sbjct: 176 NFVSKNFQGGDAGGVLARLREEFETVKYVKPASSRKDSAEVFLVALNKR 224
>gi|167646174|ref|YP_001683837.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Caulobacter sp. K31]
gi|167348604|gb|ABZ71339.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Caulobacter sp. K31]
Length = 235
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 140/229 (61%), Gaps = 8/229 (3%)
Query: 1 MVKPPGSSSRRGLTQKVKNR---SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
MVKPP + G + + + S + WL R INDP+ +A+ G+R+R+A+K+ +
Sbjct: 10 MVKPPAGGNDGGRAKPARLKTAFGRTPSQQAWLERQINDPFSAKARALGYRSRAAFKISE 69
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I++K++ + +++DLG +PG W Q+A T +V +D+L ++P+ +
Sbjct: 70 IDDKYRFFKKGAKVIDLGCAPGGWLQMATER-----GVTDIVGVDLLPVDPVAPAHILEM 124
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DF D + + +GG PDLV+SDMA T+GHR+ DHLR + L E FA+E+L GG
Sbjct: 125 DFTDPACPPKMLELLGGAPDLVMSDMAPNTVGHRETDHLRIVGLIEIGADFAIEVLKPGG 184
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K FQGG T ++ LKKHF KV+H KP ASR++S E+FL+A GF+
Sbjct: 185 AFVAKAFQGGETAAVIAQLKKHFTKVVHFKPKASRSDSSEVFLVATGFK 233
>gi|254510861|ref|ZP_05122928.1| ribosomal RNA large subunit methyltransferase J [Rhodobacteraceae
bacterium KLH11]
gi|221534572|gb|EEE37560.1| ribosomal RNA large subunit methyltransferase J [Rhodobacteraceae
bacterium KLH11]
Length = 238
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 101/237 (42%), Positives = 145/237 (61%), Gaps = 11/237 (4%)
Query: 1 MVKPPGS-----SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K P +R L KVK R + SS WL R +NDPYV+RAQ EG+R R+A+K
Sbjct: 1 MAKTPSGKNSSGRGQRDLKVKVKTARGRKLSSTRWLERQLNDPYVKRAQAEGYRGRAAFK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPI 109
+L+++EK + L R+VDLG +PG W QVA + S V+ +D+ ++EP+
Sbjct: 61 ILELDEKFRFLVPGARVVDLGCAPGGWLQVAVKRVNALGEKSGKRIGTVLGVDLQEVEPV 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G DF++ D+ + ++ +GG D+V+SDMA + GH++ DHLR M+LCE A +FA
Sbjct: 121 AGATAHVLDFMEDDADQKVKDWLGGKADVVMSDMAAASSGHKQTDHLRIMALCETAAYFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG D+ LLK+ FQKV +VKP ASR+ S E F++A GFR
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEGDLQKLLKQKFQKVANVKPPASRSNSSEKFVVATGFR 237
>gi|148557611|ref|YP_001265193.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas wittichii
RW1]
gi|189040343|sp|A5VFI9|RLME_SPHWW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|148502801|gb|ABQ71055.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas wittichii
RW1]
Length = 229
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 142/221 (64%), Gaps = 5/221 (2%)
Query: 7 SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
S + G Q++K + SS W+ R +NDPYV++AQ EG+R+R+AYKL++++E+ L
Sbjct: 2 SRAGNGGRQRIKTAKGRSASSIKWIQRQLNDPYVRKAQAEGYRSRAAYKLIELDERFHFL 61
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ +R++DLG +PG W+QV R+ A +V ID+L +PI G + DF+ ++
Sbjct: 62 RGAKRVIDLGIAPGGWTQVVRRVCPQAA----IVGIDLLPTDPIDGAIILQMDFMSDEAP 117
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
+ +A+GG D+VLSDMA T+GH++ DHLRTM+L EA FA E+L GG ++ K
Sbjct: 118 AQLAEALGGPADIVLSDMAANTVGHQQTDHLRTMALVEAGCLFASEVLRPGGTYVAKVLA 177
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG + ++ LK+ F V H KP ASR +S E +++A+GF+
Sbjct: 178 GGADHGLVAELKRLFTTVKHAKPPASRKDSSEWYVIAQGFK 218
>gi|294010578|ref|YP_003544038.1| cell division protein methyltransferase FtsJ [Sphingobium japonicum
UT26S]
gi|292673908|dbj|BAI95426.1| cell division protein methyltransferase FtsJ [Sphingobium japonicum
UT26S]
Length = 215
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 100/213 (46%), Positives = 141/213 (66%), Gaps = 5/213 (2%)
Query: 15 QKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVD 73
+VK + S WL R +NDPYV+RA+ EGWR+R+A+KL++++EK L+ +R +VD
Sbjct: 1 MRVKTAKGRTAQSTRWLERQLNDPYVRRAKAEGWRSRAAFKLIELDEKFHFLKGSRAVVD 60
Query: 74 LGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
LG +PG W+QV ++ +VV ID+L +PI GV F+ DF+D + + +A+G
Sbjct: 61 LGVAPGGWAQVVRKLCPK----AKVVGIDLLPTDPIPGVTLFQMDFMDDKAPALLAEALG 116
Query: 134 GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDIL 193
PDLV+SDMA T+GH DHLRTM L EAA FA+E L GG F+ K F GGT D+L
Sbjct: 117 DAPDLVISDMAANTVGHAATDHLRTMGLVEAAAMFAVENLRKGGTFVAKVFAGGTDADLL 176
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+LK+HF + H KP ASR SVE +++A+GF+
Sbjct: 177 AILKRHFTTIKHAKPPASRKGSVEWYVVAQGFK 209
>gi|294677155|ref|YP_003577770.1| ribosomal RNA large subunit methyltransferase J [Rhodobacter
capsulatus SB 1003]
gi|294475975|gb|ADE85363.1| ribosomal RNA large subunit methyltransferase J [Rhodobacter
capsulatus SB 1003]
Length = 259
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 90/245 (36%), Positives = 146/245 (59%), Gaps = 19/245 (7%)
Query: 1 MVKPP-------------GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEG 46
M KPP +R L +VK + + SS WL R +NDPYV RA+ EG
Sbjct: 1 MTKPPSGKSGGAGSGKNTSGRGQRDLRVRVKTAKGRKLSSTLWLERQLNDPYVVRAKKEG 60
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS-----NANNTRVVAI 101
+R R+AYK++++++K + L R+VDLG +PG W QVA + V+ +
Sbjct: 61 YRGRAAYKIMELDDKFRFLVPGARVVDLGCAPGGWCQVAVARVNALGEKGGKKVGTVLGV 120
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
D+ ++ I G + + DFL+ + + ++ +GG D+V+SDMA G++++DHLR ++L
Sbjct: 121 DLQEIAAIAGAELHQLDFLEDGADDKVKAWLGGRADVVMSDMAAAASGNQQVDHLRIITL 180
Query: 162 CEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
CE A +FA ++L +GG F+ K GG ++ +LKK+F+KV+++KP +SR +S E F++
Sbjct: 181 CEHAAYFAFDVLELGGTFVAKVLAGGAEQGLMTVLKKNFEKVVNMKPPSSRKDSSEKFVV 240
Query: 222 AKGFR 226
A GFR
Sbjct: 241 ATGFR 245
>gi|294086049|ref|YP_003552809.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292665624|gb|ADE40725.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 268
Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 99/227 (43%), Positives = 139/227 (61%), Gaps = 4/227 (1%)
Query: 3 KPPGSSSRRG----LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
K P S R Q K R + SS+ WL R +NDPYV A+ G+R+R+A KL QI
Sbjct: 13 KGPSGRSYRNATGLTRQPKKMRGRKVSSQRWLTRQLNDPYVAEAKSRGYRSRAAIKLEQI 72
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
++++Q+L+ I+DLG +PG W QVA+ T + ++V +D+LD E I+ F D
Sbjct: 73 DDRYQLLKPGMAIIDLGCAPGGWLQVASIRTKLGISKAKLVGVDLLDTEHIVDADIFVGD 132
Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
D +++A+GG D V+SDMA T GHR DHLRT +L E A FAL++L G
Sbjct: 133 MTDDAMMTQMQEAVGGAADGVMSDMAADTTGHRATDHLRTTALLETALDFALDVLRKDGF 192
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
FL K F+GG +L L++++F+ V HVKP ASR+ESVE ++LA GF
Sbjct: 193 FLAKCFRGGAERSVLDLMRQNFKTVRHVKPTASRSESVESYVLATGF 239
>gi|221234624|ref|YP_002517060.1| 23S rRNA Um2552 2'-O-methyltransferase [Caulobacter crescentus
NA1000]
gi|220963796|gb|ACL95152.1| 23S rRNA Um2552 2'-O-methyltransferase [Caulobacter crescentus
NA1000]
Length = 236
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 93/229 (40%), Positives = 137/229 (59%), Gaps = 8/229 (3%)
Query: 1 MVKPPGSS--SRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
MVKPP RG ++K S + WL R INDP+ +A+ G+R+R+A+K+ +
Sbjct: 11 MVKPPAGGNEGGRGKPARLKTAYGRTPSQQAWLERQINDPFSAKARALGYRSRAAFKISE 70
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I++K +++DLG +PG W Q+A T + ID+L ++P+ +
Sbjct: 71 IDDKFHFFSKGAKVIDLGCAPGGWLQIAVER-----GVTTLAGIDLLPVDPVAPAHLLEM 125
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DF + E + + +GG PDLV+SDMA T+GHR+ DHLR + L E A FA+++L GG
Sbjct: 126 DFTADGAPEKLLELLGGEPDLVMSDMAPNTVGHRETDHLRIVGLIEIAAEFAIDVLKPGG 185
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K FQGG T +I+ LK+HF KV H KP ASR +S E+FL+A GF+
Sbjct: 186 AFVAKAFQGGETAEIIGKLKRHFDKVQHFKPKASRQDSSEVFLVATGFK 234
>gi|16125862|ref|NP_420426.1| cell division protein FtsJ [Caulobacter crescentus CB15]
gi|81535426|sp|Q9A7V4|RLME_CAUCR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|13423014|gb|AAK23594.1| cell division protein FtsJ [Caulobacter crescentus CB15]
Length = 226
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 93/229 (40%), Positives = 137/229 (59%), Gaps = 8/229 (3%)
Query: 1 MVKPPGSS--SRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
MVKPP RG ++K S + WL R INDP+ +A+ G+R+R+A+K+ +
Sbjct: 1 MVKPPAGGNEGGRGKPARLKTAYGRTPSQQAWLERQINDPFSAKARALGYRSRAAFKISE 60
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I++K +++DLG +PG W Q+A T + ID+L ++P+ +
Sbjct: 61 IDDKFHFFSKGAKVIDLGCAPGGWLQIAVER-----GVTTLAGIDLLPVDPVAPAHLLEM 115
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DF + E + + +GG PDLV+SDMA T+GHR+ DHLR + L E A FA+++L GG
Sbjct: 116 DFTADGAPEKLLELLGGEPDLVMSDMAPNTVGHRETDHLRIVGLIEIAAEFAIDVLKPGG 175
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K FQGG T +I+ LK+HF KV H KP ASR +S E+FL+A GF+
Sbjct: 176 AFVAKAFQGGETAEIIGKLKRHFDKVQHFKPKASRQDSSEVFLVATGFK 224
>gi|56551298|ref|YP_162137.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241760953|ref|ZP_04759042.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753080|ref|YP_003225973.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|81355445|sp|Q5NQH8|RLME_ZYMMO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56542872|gb|AAV89026.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374572|gb|EER64033.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552443|gb|ACV75389.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 221
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 102/214 (47%), Positives = 143/214 (66%), Gaps = 5/214 (2%)
Query: 14 TQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
Q+VK R +S WL R +NDPYVQ+AQ EG+R+R+A+KL++++E+ +L++ RRI+
Sbjct: 6 HQRVKTARRRTAASTRWLERQLNDPYVQKAQAEGYRSRAAFKLIELDERFSLLKNARRII 65
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG +PG WSQVA + ++V ID+L+ PI GV F+ DF D ++ + + +A+
Sbjct: 66 DLGIAPGGWSQVARKKAP----QAKIVGIDLLEAAPIEGVTIFQNDFTDPEAQKKLIEAL 121
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG DLVLSDMA TIGH + DHLRTM+L E A FA E L GG F+ K GG D+
Sbjct: 122 GGAADLVLSDMAANTIGHAQTDHLRTMALVEEAAVFASETLREGGSFVAKVLAGGADKDL 181
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ LLK+ F +V H KP ASR ES E +++A+ FR
Sbjct: 182 VALLKRLFGQVKHAKPPASRRESSEWYVIAQNFR 215
>gi|86138870|ref|ZP_01057442.1| ribosomal RNA large subunit methyltransferase J [Roseobacter sp.
MED193]
gi|85824517|gb|EAQ44720.1| ribosomal RNA large subunit methyltransferase J [Roseobacter sp.
MED193]
Length = 243
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 92/230 (40%), Positives = 148/230 (64%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R L KVK+ R + SS WL R +NDPYV+RAQ EG+R R+AYK++++++K
Sbjct: 13 KNTSGRGQRDLKVKVKSARGRRLSSTRWLQRQLNDPYVKRAQAEGYRGRAAYKIMEVDDK 72
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFK 116
++ L R+VDLG +PG W+QVA + R++ +D+ ++EP+ G +F
Sbjct: 73 YRFLVPGARVVDLGCAPGGWAQVAVKRINVMGEKRGKAQGRIIGVDLQEIEPLAGAEFHT 132
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF+D + + +++ +GG D+V+SDMA + GH++ DHL+ ++LCEAA +FA ++L G
Sbjct: 133 LDFMDEGADDQVKEWLGGKADVVMSDMAASSSGHKQTDHLKIIALCEAAAYFAFDVLEEG 192
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG ++ LLK F KV +VKP +SR++S E F++A G++
Sbjct: 193 GTFVAKVLAGGAEGELQKLLKNKFTKVANVKPPSSRSDSSEKFVVAMGYK 242
>gi|239996921|ref|ZP_04717445.1| 23S rRNA methyltransferase J [Alteromonas macleodii ATCC 27126]
Length = 209
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS+ WL H+ND YVQ+A EGWR+R+ YKL +I +K ++++ +VDLG+
Sbjct: 1 MTKKKHSASSKRWLQEHVNDHYVQKANKEGWRSRAIYKLEEIQKKDKLIKPGMTLVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ+AA++ G N +V+A DIL M+PI+GV F + DF + + + IGGN
Sbjct: 61 APGGWSQLAAQLVGDN---GQVIACDILPMDPIVGVDFLQGDFREDAVLDALLNRIGGNT 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VLSDMA G+ +D R+M LCE A ++L GG F++K FQG + +
Sbjct: 118 VDIVLSDMAPNLAGNASVDQSRSMYLCELALDMCHQVLKPGGSFVIKVFQGEGFVEFMNA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LK+ F + KP +SR+ S E++L+A G++
Sbjct: 178 LKQSFTTIKTRKPDSSRSRSREVYLVACGYK 208
>gi|120553329|ref|YP_957680.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter aquaeolei
VT8]
gi|143460489|sp|A1TXM4|RLME_MARAV RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120323178|gb|ABM17493.1| 23S rRNA Um-2552 2'-O-methyltransferase [Marinobacter aquaeolei
VT8]
Length = 207
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL H+NDP+V++AQ +G+R+R++YKLL+IN K ++++ +VDLGS+PG W
Sbjct: 3 RSKSSNRWLEEHVNDPFVKQAQQDGYRSRASYKLLEINNKDRLIKPTDLVVDLGSAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++ G RVVA DIL M+PI GV+F + DF + + ++ I + G D+V+
Sbjct: 63 SQVAAKLVGHK---GRVVASDILPMDPIAGVEFIQGDFTEQEVFDQIMAILDGARADVVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G D +M L E A A ++L G F+ K F G ++ + +++ F
Sbjct: 120 SDMAPNISGVNAADQAASMYLVELALDMACQVLKPKGSFVAKVFHGEGYDEYVKTVRESF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV+ KP +SRA S E++L+AKGFR
Sbjct: 180 DKVVIRKPDSSRARSREVYLVAKGFR 205
>gi|260575119|ref|ZP_05843120.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodobacter sp. SW2]
gi|259022741|gb|EEW26036.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodobacter sp. SW2]
Length = 246
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 94/231 (40%), Positives = 141/231 (61%), Gaps = 6/231 (2%)
Query: 2 VKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
K +R L +VK+ + + SS WL R +NDPYV RA+ EG+R R+A+K+L++++
Sbjct: 7 TKGTSGRGQRELRVRVKSAKGRKLSSTLWLERQLNDPYVIRAKKEGYRGRAAFKILELDD 66
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFF 115
K+ L+ R+VDLG +PG W QVA N V+ +D+ ++EPI G +
Sbjct: 67 KYGFLKPGARVVDLGCAPGGWCQVAVGRVNALAERKNKPVGTVLGVDLQEVEPIAGAQIH 126
Query: 116 KFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI 175
+ DFL D+ ++ +GG D+V+SDMA GH+ DHLR ++LCEAA FA ++L
Sbjct: 127 QLDFLADDADALVKGWLGGPADVVMSDMAAAASGHKGTDHLRIIALCEAAAQFAFDVLEE 186
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG F+ K GG + +LK++F KV +VKP ASRA+S E F++A G+R
Sbjct: 187 GGTFVAKVLAGGAEIGLQTMLKQNFDKVANVKPPASRADSSEKFVVAMGYR 237
>gi|197104878|ref|YP_002130255.1| cell division protein FtsJ [Phenylobacterium zucineum HLK1]
gi|196478298|gb|ACG77826.1| cell division protein FtsJ [Phenylobacterium zucineum HLK1]
Length = 239
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 94/229 (41%), Positives = 142/229 (62%), Gaps = 8/229 (3%)
Query: 1 MVKPPGSS--SRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
MVKPP RG ++K + S + WL R +NDP+ +A+ G+R+R+A+K+ +
Sbjct: 9 MVKPPTGGQEGGRGKPARLKTAKQRTPSQQAWLERQVNDPFAAKARALGYRSRAAFKISE 68
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I+++ + + R+VDLG +PG W+QVA + T +V +D+L +EP+ +
Sbjct: 69 IDDRFHLFRKGVRVVDLGLAPGGWTQVAIQR-----GVTDIVGVDLLPVEPLPPAHILQM 123
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DF D + + +GG PD+V+SDMA TIGHR+ DHLR + L EAA FA+E+L GG
Sbjct: 124 DFTDPACGPKLIELLGGPPDVVISDMAPNTIGHRETDHLRIVGLIEAAIDFAVEVLKPGG 183
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K FQGG T+ I+ LK F+ V ++KP ASR +S E+FL+A GF+
Sbjct: 184 TFVAKAFQGGGTDQIIAGLKTRFKDVRNIKPKASRQDSSEVFLVATGFK 232
>gi|89054472|ref|YP_509923.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Jannaschia sp. CCS1]
gi|122498740|sp|Q28QW4|RLME_JANSC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|88864021|gb|ABD54898.1| 23S rRNA Um-2552 2'-O-methyltransferase [Jannaschia sp. CCS1]
Length = 237
Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 97/232 (41%), Positives = 143/232 (61%), Gaps = 6/232 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
MVK +R L KVK R + SS WL R +NDPYV A+ +G+R R+AYK++ ++
Sbjct: 1 MVKKTSGRGQRDLKVKVKTARGRKLSSTRWLERQLNDPYVAAARRDGYRGRAAYKIIDLD 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKF 114
+K++ L R+VDLG +PG W QVA + S R++ +D+ +MEPI G +
Sbjct: 61 DKYRFLVPGARVVDLGCAPGGWCQVAVKRVNALGEKSGKAVGRIIGLDLQEMEPIAGCEL 120
Query: 115 FKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN 174
+ DF++ D+ ++ +GG D+V+SDMA GH++ DH+R M+LCEAA A ++L
Sbjct: 121 HQLDFMEDDADLKVKDWLGGRADVVMSDMAASASGHKQTDHMRIMALCEAAAELAFDVLE 180
Query: 175 IGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG F+ K GG + LLK+ F+KV +VKP ASRA+S E F++A GFR
Sbjct: 181 PGGTFVAKVLAGGAEGTLQRLLKQRFKKVANVKPGASRADSSEKFVVATGFR 232
>gi|126735777|ref|ZP_01751522.1| ribosomal RNA large subunit methyltransferase, putative
[Roseobacter sp. CCS2]
gi|126714964|gb|EBA11830.1| ribosomal RNA large subunit methyltransferase, putative
[Roseobacter sp. CCS2]
Length = 241
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 100/237 (42%), Positives = 150/237 (63%), Gaps = 11/237 (4%)
Query: 1 MVKPP-----GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYK 54
M K P +R LT KVK R + SS WL R +NDPYV+RAQ EG+R R+AYK
Sbjct: 1 MAKKPTKKNTSGRGQRDLTVKVKTARGRKLSSTQWLQRQLNDPYVKRAQTEGYRGRAAYK 60
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPI 109
+L++++K++ L RIVDLG +PG W QVA + + V+ +D+ ++EP+
Sbjct: 61 ILELDDKYRFLVPGARIVDLGCAPGGWLQVAVKRANTLGERTSKAQGYVLGVDLQEVEPV 120
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G + ++ DF++ D+ +++ +GG D+V+SDMA GH++ DHLR ++LCEAA +FA
Sbjct: 121 AGAEIYQLDFMEDDADLKVKEWLGGKADVVMSDMAASASGHKQTDHLRIIALCEAAAYFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG D+ LLK F+KV +VKP ASR++S E F++A GF+
Sbjct: 181 FDVLEEGGTFVAKVLAGGAEGDLQKLLKARFKKVANVKPPASRSDSSEKFVVATGFK 237
>gi|255263254|ref|ZP_05342596.1| ribosomal RNA large subunit methyltransferase J [Thalassiobium sp.
R2A62]
gi|255105589|gb|EET48263.1| ribosomal RNA large subunit methyltransferase J [Thalassiobium sp.
R2A62]
Length = 237
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 151/236 (63%), Gaps = 10/236 (4%)
Query: 1 MVKPP----GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKL 55
M K P +R LT KVK+ R + SS WL R +NDPYV+RA+ +G+R R+AYK+
Sbjct: 1 MAKKPTGNTSGRGQRDLTVKVKSARGRKMSSTLWLQRQLNDPYVKRAKADGYRGRAAYKI 60
Query: 56 LQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPIL 110
L++++K++ L RIVDLG++PG W QVA + ++ ++ +D+ +MEPI
Sbjct: 61 LELDDKYRFLVPGARIVDLGAAPGGWCQVAVKRCNVLGQKTSKAQGTILGVDLQEMEPIA 120
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
G + + DF++ D+ +++ +GG D+V+SDMA GH++ DHLR ++LCEAA +FA
Sbjct: 121 GCELHQLDFMEDDADLKVKEWLGGKADVVMSDMAASASGHKQTDHLRIIALCEAAAYFAF 180
Query: 171 EMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG F+ K GG D+ LLK F KV +VKP ASR++S E F++A GF+
Sbjct: 181 DVLEEGGTFVAKVLAGGAEGDLQKLLKTKFTKVANVKPPASRSDSSEKFVVATGFK 236
>gi|307294965|ref|ZP_07574807.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingobium
chlorophenolicum L-1]
gi|306879439|gb|EFN10657.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingobium
chlorophenolicum L-1]
Length = 223
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 141/220 (64%), Gaps = 5/220 (2%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
+VK + S WL R +NDPYV+RA+ EGWR+R+A+KL++++EK ++
Sbjct: 2 RGTGAGKVRVKTAKGRTAQSTRWLERQLNDPYVRRAKAEGWRSRAAFKLIELDEKFHFVK 61
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE 126
+R +VDLG +PG W+QV ++ +VV ID+L +PI GV F+ DF+D +
Sbjct: 62 GSRAVVDLGVAPGGWAQVVRKLCPK----AKVVGIDLLPTDPIPGVTLFQMDFMDDKAPV 117
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
+ +A+G PDLV+SDMA T+GH DHLRTM L EAA FA+E L GG F+ K F G
Sbjct: 118 LLAEALGDAPDLVISDMAANTVGHAATDHLRTMGLVEAAAMFAVENLRKGGTFVAKVFAG 177
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GT D+L +LKKHF + H KP ASR SVE +++A+GF+
Sbjct: 178 GTDADLLAILKKHFTTIKHAKPPASRKGSVEWYVVAQGFK 217
>gi|296116233|ref|ZP_06834851.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gluconacetobacter
hansenii ATCC 23769]
gi|295977339|gb|EFG84099.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gluconacetobacter
hansenii ATCC 23769]
Length = 213
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 134/214 (62%), Gaps = 6/214 (2%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+T K K R + WL R +NDPYVQ AQ +GWR+R+A+KL++++++ +++ R+V
Sbjct: 1 MTVK-KARGRTTAQHRWLQRQLNDPYVQAAQKQGWRSRAAFKLIELDDRFHLIRPGMRVV 59
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG W+QVA + + V+ +D+L ++P+ G + DF D D E +R+ +
Sbjct: 60 DLGAAPGGWAQVAVKR-----GASHVIGVDLLPVDPVPGATIIEGDFNDPDMPERLRELL 114
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G PDLV+SDMA T GH DHLR + L E A FA ++L GG F+ K FQGG +
Sbjct: 115 DGAPDLVMSDMAPNTTGHAPTDHLRIIGLAELALDFATQILAPGGSFIAKVFQGGAEKQM 174
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L LK F +V H KP ASR ES E++++A FR
Sbjct: 175 LQALKHSFGQVRHAKPPASRKESSELYVIATDFR 208
>gi|319406133|emb|CBI79772.1| cell division protein ftsJ [Bartonella sp. AR 15-3]
Length = 240
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 110/218 (50%), Positives = 153/218 (70%), Gaps = 2/218 (0%)
Query: 11 RGLTQKVKNR--SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN 68
+ L Q++K + + + SSR WL RH+NDPYV +++++G+R+RSAYKL++I+E+++I +
Sbjct: 16 KALYQRIKKKAGTIKSSSRRWLERHLNDPYVHKSKVDGYRSRSAYKLIEIDERYKIFKKG 75
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
++++DLG++PG W QV +R S VV ID L M+P+ GV K DFL D+ + +
Sbjct: 76 QKVIDLGAAPGGWCQVVSRKVASTDQKPSVVGIDYLAMDPLPGVIVLKMDFLCEDAPQKL 135
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
A+ PD+VLSDMA PT GHRK DHLRTM LCE A FAL +L GG FL K FQGG
Sbjct: 136 MNALETQPDIVLSDMAAPTTGHRKTDHLRTMYLCEMAADFALSVLKTGGHFLAKAFQGGA 195
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
N +L LK++F+ V HVKP ASRAESVE++LLA F+
Sbjct: 196 ENTLLTTLKQNFKIVHHVKPPASRAESVELYLLALEFK 233
>gi|212710001|ref|ZP_03318129.1| hypothetical protein PROVALCAL_01052 [Providencia alcalifaciens DSM
30120]
gi|212687410|gb|EEB46938.1| hypothetical protein PROVALCAL_01052 [Providencia alcalifaciens DSM
30120]
Length = 209
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + +I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G +N R++A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYV---VGQIGHNGRIIACDLLPMDPIVGVDFLQGDFRDDAVLAALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A +L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALDMCRAVLAPGGSFIVKVFQGEGFDEYLRD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPESSRARSREVYIVATGLK 208
>gi|254453503|ref|ZP_05066940.1| ribosomal RNA large subunit methyltransferase J [Octadecabacter
antarcticus 238]
gi|198267909|gb|EDY92179.1| ribosomal RNA large subunit methyltransferase J [Octadecabacter
antarcticus 238]
Length = 244
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 142/230 (61%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K R LT KVK R + SS WL R +NDPYV RA+ +G+R R+AYK+L++NEK
Sbjct: 11 KNTSGRGNRDLTVKVKTARGRRMSSTLWLQRQLNDPYVVRAKADGYRGRAAYKILELNEK 70
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFK 116
+R+VDLG++PG W Q+A ++ ID+ +MEPI G +
Sbjct: 71 FDFFTPGKRVVDLGAAPGGWIQIAVPKVNALGERKGKPIGTILGIDLQEMEPIAGSELHV 130
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF++ D+ + +++ +GG D+VLSDMA GH++ DH R M+LCEAA +FA ++L G
Sbjct: 131 LDFMEDDADQKVKEWLGGKADIVLSDMAASASGHKQTDHNRIMALCEAAAYFAFDVLEEG 190
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG D+ LLK +F+KV +VKP ASR++S E F++A GFR
Sbjct: 191 GVFVAKVLAGGAEADLQRLLKVNFKKVQYVKPPASRSDSSEKFVVATGFR 240
>gi|197287223|ref|YP_002153095.1| 23S rRNA methyltransferase J [Proteus mirabilis HI4320]
gi|227357082|ref|ZP_03841452.1| ribosomal RNA large subunit methyltransferase J (cell division
protein FtsJ) [Proteus mirabilis ATCC 29906]
gi|226705299|sp|B4F2B2|RLME_PROMH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|194684710|emb|CAR46685.1| ribosomal RNA large subunit methyltransferase J (cell division
protein FtsJ) [Proteus mirabilis HI4320]
gi|227162774|gb|EEI47737.1| ribosomal RNA large subunit methyltransferase J (cell division
protein FtsJ) [Proteus mirabilis ATCC 29906]
Length = 209
Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+A+ +G+R+R+ +KL +I + I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAKKKGFRSRAWFKLEEIQQSDNIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ + G+ R++A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVQQLGNK---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLDRVGDNK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALDMCRDVLAPGGSFIVKVFQGEGFDEYLGQ 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDASRSRSREVYIVATGRK 208
>gi|114798748|ref|YP_760506.1| putative ribosomal RNA large subunit methyltransferase J
[Hyphomonas neptunium ATCC 15444]
gi|123028016|sp|Q0C187|RLME_HYPNA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114738922|gb|ABI77047.1| putative ribosomal RNA large subunit methyltransferase J
[Hyphomonas neptunium ATCC 15444]
Length = 234
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 105/230 (45%), Positives = 147/230 (63%), Gaps = 10/230 (4%)
Query: 3 KPPGS----SSRRGLTQKVKNRS-CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
K PG S RR +KV R+ SS+ W+ R + DPYV++A+ EG+R+R+AYKLL+
Sbjct: 10 KGPGPERQDSGRRSTERKVIARNARTESSKRWIERQLQDPYVRKAKDEGYRSRAAYKLLE 69
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I+ +IL+ R+VDLG +PG W QV+ + VV ID+L ++PI G +
Sbjct: 70 IDAAAKILRKGMRVVDLGCAPGGWIQVSLQQ-----GAAEVVGIDLLPLDPIEGATIIEG 124
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
D + D + + G PDL+LSDMA T GH++ DHLRT++L E A FA+E L+ GG
Sbjct: 125 DVNNPDDVARMMAGLSGTPDLILSDMAANTTGHKQTDHLRTVALVEMAVAFAIEHLDDGG 184
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
F K FQGG T D+L LLK+HF+ V H+KP ASRA S E++++AKGFR+
Sbjct: 185 AFCAKVFQGGATKDVLNLLKQHFRTVKHIKPAASRAGSPEIYVVAKGFRR 234
>gi|88705677|ref|ZP_01103387.1| Ribosomal RNA large subunit methyltransferase J [Congregibacter
litoralis KT71]
gi|88700190|gb|EAQ97299.1| Ribosomal RNA large subunit methyltransferase J [Congregibacter
litoralis KT71]
Length = 206
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 125/207 (60%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS+ WL H +DPYVQ+AQ +G+R+R+ YKLL++ E+ I++ ++DLGS+PG
Sbjct: 3 KKSSSSKAWLREHRDDPYVQQAQRDGYRSRACYKLLELQERDNIIRPGMTVLDLGSAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLV 139
WSQVAA + G +V+A DIL M+PI GV F + DF + +E I + + DLV
Sbjct: 63 WSQVAAELVG---KRGQVIASDILPMDPIDGVNFVQGDFTEDQVFEQILAEMGDKSADLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D +++ L E A A +L GG F+ K FQG +++ ++
Sbjct: 120 ISDMAPNMSGVSAVDQPKSIYLVELALDMATRVLVPGGAFITKVFQGEGFDELFRATREQ 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV+ KP ASR S E++L+A+G R
Sbjct: 180 FDKVLTRKPSASRPRSREVYLVARGRR 206
>gi|261345168|ref|ZP_05972812.1| ribosomal RNA large subunit methyltransferase J [Providencia
rustigianii DSM 4541]
gi|282566860|gb|EFB72395.1| ribosomal RNA large subunit methyltransferase J [Providencia
rustigianii DSM 4541]
Length = 209
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + +I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQGDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G ++ RV+A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIG---HHGRVIACDLLPMDPIVGVDFLQGDFRDEAVLAALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G ++D R+M L E A +L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPEVDIPRSMYLVELALDMCRAVLAPGGSFIVKVFQGEGFDEYLRD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPESSRARSREVYIVATGLK 208
>gi|94496284|ref|ZP_01302862.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas sp. SKA58]
gi|94424463|gb|EAT09486.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sphingomonas sp. SKA58]
Length = 224
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 143/220 (65%), Gaps = 5/220 (2%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
+VK + S WL RH+NDPYV++A+ EGWR+R+A+KL++++EK ++
Sbjct: 2 RGAGAGKVRVKTAKGRTAQSVRWLERHLNDPYVKKAKAEGWRSRAAFKLIELDEKFHFVK 61
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE 126
+R +VDLG +PG W+QV ++ A VV ID+L +PI GV F+ DF+D + +
Sbjct: 62 GSRAVVDLGVAPGGWAQVVRKMAPKAA----VVGIDLLPTDPIPGVTLFEMDFMDDKAPD 117
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
+R+A+G PDLV+SDMA T+GH DHLRTM L EAA FA+E L GG F+ K F G
Sbjct: 118 LLREALGQEPDLVISDMAANTVGHAPTDHLRTMGLVEAAAQFAVENLRKGGTFVAKVFAG 177
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GT +L +LKKHF + H KP ASR SVE +++A+GF+
Sbjct: 178 GTDAQLLAVLKKHFTTIKHAKPPASRKGSVEWYVVAQGFK 217
>gi|268592832|ref|ZP_06127053.1| ribosomal RNA large subunit methyltransferase J [Providencia
rettgeri DSM 1131]
gi|291311618|gb|EFE52071.1| ribosomal RNA large subunit methyltransferase J [Providencia
rettgeri DSM 1131]
Length = 209
Score = 201 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + +I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLEEIQQGDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G N RV+A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGHN---GRVIACDLLPMDPIVGVDFLQGDFRDEAVLAALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A +L GG F+VK FQG +D L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALDMCRAVLAPGGSFIVKVFQGEGFDDYLRD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPESSRARSREVYIVATGLK 208
>gi|226329691|ref|ZP_03805209.1| hypothetical protein PROPEN_03603 [Proteus penneri ATCC 35198]
gi|225202877|gb|EEG85231.1| hypothetical protein PROPEN_03603 [Proteus penneri ATCC 35198]
Length = 209
Score = 201 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G+R+R+ +KL +I + I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGFRSRAWFKLEEIQQSDNIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ + GS R++A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVQKLGSK---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLDRVGENK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALDMCRDVLAPGGSFIVKVFQGEGFDEYLGQ 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDASRSRSREVYIVATGRK 208
>gi|326797289|ref|YP_004315109.1| ribosomal RNA large subunit methyltransferase E [Marinomonas
mediterranea MMB-1]
gi|326548053|gb|ADZ93273.1| Ribosomal RNA large subunit methyltransferase E [Marinomonas
mediterranea MMB-1]
Length = 206
Score = 201 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 132/206 (64%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL+ H+NDPYV++AQ++G+R+R++YKLL++N+K ++++ ++DLGS+PG W
Sbjct: 3 RSKSSNRWLDEHVNDPYVKQAQVDGYRSRASYKLLELNDKDKLIKPGNLVMDLGSAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLVL 140
SQ+A+++ G+ +V+A DIL M+ + GV+F + DF + ++ I A+ G D+V+
Sbjct: 63 SQIASKLVGNK---GKVIASDILPMDSLAGVEFIQGDFTEQSVFDEIMVAVNGAPVDVVV 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G D ++ L E A A ++L G F VK F G + + ++KHF
Sbjct: 120 SDMAPNLSGIASSDQASSIYLVELALDMATQVLKPKGSFAVKVFHGEGYDAFVKEVRKHF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
Q V+ KP +SRA S E++L+ KGF+
Sbjct: 180 QTVVVRKPDSSRARSREVYLVGKGFK 205
>gi|126726913|ref|ZP_01742752.1| ribosomal RNA large subunit methyltransferase J [Rhodobacterales
bacterium HTCC2150]
gi|126703871|gb|EBA02965.1| ribosomal RNA large subunit methyltransferase J [Rhodobacterales
bacterium HTCC2150]
Length = 235
Score = 201 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 102/230 (44%), Positives = 145/230 (63%), Gaps = 5/230 (2%)
Query: 2 VKPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
K R L KVK+ R + SS WL R +NDPYV+RAQ +G+R R+AYK+L++NE
Sbjct: 5 TKNTSGRGERDLKIKVKSARGRKLSSTLWLQRQLNDPYVRRAQDDGYRGRAAYKILELNE 64
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGS----NANNTRVVAIDILDMEPILGVKFFK 116
K L + R+VDLG +PG W QVA S + ++V +D+ ME I G ++
Sbjct: 65 KFNFLTAGARVVDLGCAPGGWCQVAVPRVNSLGTKSGKVGKIVGVDLQVMESISGCDLYQ 124
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF+D + + +++ +GG D+V+SDMA + GH++ DHL+ M+LCEAA +FA ++L G
Sbjct: 125 LDFMDEGADDKVKEWLGGKADVVMSDMAASSSGHKQTDHLKIMALCEAAAYFAFDVLEDG 184
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ KT GG D+ LLK+ F KV +VKP ASRA S E F++A GFR
Sbjct: 185 GTFIAKTLAGGAEGDLQKLLKQKFTKVANVKPPASRANSSEKFVVATGFR 234
>gi|221639177|ref|YP_002525439.1| Ribosomal RNA large subunit methyltransferase J [Rhodobacter
sphaeroides KD131]
gi|221159958|gb|ACM00938.1| Ribosomal RNA large subunit methyltransferase J [Rhodobacter
sphaeroides KD131]
Length = 229
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 138/218 (63%), Gaps = 6/218 (2%)
Query: 15 QKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVD 73
+VK + + SS WL R +NDPYV RA+ EG+R R+AYK+L++++K L+ R+VD
Sbjct: 1 MRVKTAKGRKLSSTLWLERQLNDPYVIRAKKEGYRGRAAYKILELDDKFGFLKPGGRVVD 60
Query: 74 LGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
LG +PG W QVA N V+ +D+ ++EPI G + + DFL D+ E +
Sbjct: 61 LGCAPGGWCQVAVERVNALGQKKNKPEGTVLGVDLQEVEPISGAEIHQLDFLSDDADEKV 120
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
+ +GG D+V+SDMA GH+ DHLR ++LCEAA FA ++L GG F+ K GG
Sbjct: 121 KGWLGGRADVVMSDMAAAASGHKGTDHLRIIALCEAAAAFAFDVLEEGGTFVAKVLAGGA 180
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
N++ LLKK+F KV +VKP ASRA+S E F++A GFR
Sbjct: 181 ENELQALLKKNFTKVANVKPPASRADSSEKFVVAMGFR 218
>gi|329297291|ref|ZP_08254627.1| 23S rRNA methyltransferase J [Plautia stali symbiont]
Length = 209
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ + GS R++A D+L ++PI GV F + DF D + + + +G
Sbjct: 61 APGGWSQYVVQQIGSG---GRIIACDLLPIDPIGGVDFLQGDFRDEAVLKALLERVGDQK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALEMCRDVLAPGGSFVVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 208
>gi|317046734|ref|YP_004114382.1| ribosomal RNA large subunit methyltransferase J [Pantoea sp. At-9b]
gi|316948351|gb|ADU67826.1| ribosomal RNA large subunit methyltransferase J [Pantoea sp. At-9b]
Length = 209
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 122/211 (57%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLEEIQQGDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ ++ GS+ R++A D+L M+PI+GV F + DF D + + + +G
Sbjct: 61 APGGWSQYVVQLIGSS---GRIIACDLLPMDPIVGVDFLQGDFRDEAVLKTLLERVGDEK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALEMCRDILAPGGSFVVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 208
>gi|183600359|ref|ZP_02961852.1| hypothetical protein PROSTU_03922 [Providencia stuartii ATCC 25827]
gi|188020150|gb|EDU58190.1| hypothetical protein PROSTU_03922 [Providencia stuartii ATCC 25827]
Length = 209
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + +I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G N RV+A DIL M+PI+GV F + DF + + + +
Sbjct: 61 APGGWSQYVVSQIGHN---GRVIACDILPMDPIVGVDFLQGDFREEAVLAALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A +L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALDMCRAVLAPGGSFIVKVFQGEGFDEYLRD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPESSRARSREVYIVATGLK 208
>gi|254438214|ref|ZP_05051708.1| ribosomal RNA large subunit methyltransferase J [Octadecabacter
antarcticus 307]
gi|198253660|gb|EDY77974.1| ribosomal RNA large subunit methyltransferase J [Octadecabacter
antarcticus 307]
Length = 244
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 143/230 (62%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K +R LT KVK+ R + SS WL R +NDPYV RA+ +G+R R+AYK+L++N+K
Sbjct: 11 KNSSGRGQRDLTVKVKSARGRKMSSTLWLQRQLNDPYVVRAKADGYRGRAAYKILELNDK 70
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFK 116
+R+VDLG++PG W Q+A ++ ID+ +MEPI G +
Sbjct: 71 FDFFTPGKRVVDLGAAPGGWIQIAVPKVNALGERKGKPIGTILGIDLQEMEPIAGSELHV 130
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF++ D+ + ++ +GG D+VLSDMA GH++ DH R M+LCEAA +FA ++L G
Sbjct: 131 LDFMEDDADQKVKDWLGGKADIVLSDMAASASGHKQTDHNRIMALCEAAAYFAFDVLEEG 190
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG D+ LLK +F+KV +VKP ASR++S E F++A GFR
Sbjct: 191 GVFVAKVLAGGAEADLQRLLKINFKKVQYVKPPASRSDSSEKFVVATGFR 240
>gi|329850827|ref|ZP_08265672.1| ftsJ-like methyltransferase family protein [Asticcacaulis
biprosthecum C19]
gi|328841142|gb|EGF90713.1| ftsJ-like methyltransferase family protein [Asticcacaulis
biprosthecum C19]
Length = 226
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 144/230 (62%), Gaps = 9/230 (3%)
Query: 1 MVKPPGSSSRRGLTQ---KVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLL 56
MVKPP + G + VK + SS WL R +NDPYVQ+A+ EGWR+R+A+KL+
Sbjct: 1 MVKPPEGGTLAGRGKGHTAVKTAKYRTQSSAKWLERQLNDPYVQQAKAEGWRSRAAFKLI 60
Query: 57 QINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFK 116
+I+E+ +L+ R++DLG +PG W QVA + VV +D+L ++P+ G +
Sbjct: 61 EIDERFHLLKRGSRVIDLGCAPGGWVQVAKKR-----GAAHVVGVDLLPVDPVPGADILE 115
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF D + + +GG PD+VLSD+A+ T+GH++ DHL+ M L E A FALE L G
Sbjct: 116 ADFTDPAIGPQLIELMGGKPDIVLSDLAHNTVGHKQTDHLKIMGLLEMAGDFALENLKPG 175
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K FQGG T ++L LK F V H+KP +SRA S E++++A GFR
Sbjct: 176 GAFVAKAFQGGETEELLLKLKLAFDVVKHMKPKSSRAGSTEIYIVATGFR 225
>gi|114771066|ref|ZP_01448506.1| ribosomal RNA large subunit methyltransferase J [alpha
proteobacterium HTCC2255]
gi|114548348|gb|EAU51234.1| ribosomal RNA large subunit methyltransferase J [alpha
proteobacterium HTCC2255]
Length = 236
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 93/230 (40%), Positives = 143/230 (62%), Gaps = 6/230 (2%)
Query: 3 KPPGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K R L +VK+ + + SS WL R +NDPYV RA EG+R R+A+K++++++K
Sbjct: 6 KNTSGRGMRDLQVRVKSAKGRKLSSTLWLKRQLNDPYVARATKEGYRGRAAFKIMELDDK 65
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITGSNA-----NNTRVVAIDILDMEPILGVKFFK 116
+ L RIVDLG +PG W QVA + +N ++ ID+ +++PI G +
Sbjct: 66 FRFLVPGARIVDLGCAPGGWCQVAVKRVNANGDKQGKKIGTILGIDLQEVDPIEGCEIHV 125
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF++ D+ +++ +GGN D+V+SDMA GH++ DH+R M+LCE A +FA ++L G
Sbjct: 126 LDFMEDDADNKVKKWLGGNADVVMSDMAASASGHKQTDHIRIMALCETAAYFAFDVLEEG 185
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K GG ++ LLK+ F KV H+KP +SRA+S E F++A GFR
Sbjct: 186 GTFVAKVLAGGAEGELQKLLKEKFTKVYHMKPPSSRADSSEKFVVATGFR 235
>gi|157825346|ref|YP_001493066.1| ribosomal RNA large subunit methyltransferase J [Rickettsia akari
str. Hartford]
gi|189040325|sp|A8GMD3|RLME_RICAH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|157799304|gb|ABV74558.1| Ribosomal RNA large subunit methyltransferase J [Rickettsia akari
str. Hartford]
Length = 227
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 154/222 (69%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK + SS +WL R +NDPYV +A++EG+R+R+AYKLL+I+EK ++
Sbjct: 6 SGYRNKFVRVKTSKKRTVSSGNWLRRQLNDPYVAKARIEGFRSRAAYKLLEIHEKFKLFT 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNAN--NTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N +IVDLG++PG WSQVA+++ ++ N N ++++ID+L++EPI+GV+F + DF + ++
Sbjct: 66 PNMKIVDLGAAPGGWSQVASKLIKASDNSLNNKIISIDLLEIEPIIGVEFLQKDFFEENT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
E I Q + G D+V+SDMA T GH+ DH+RT+ LCE A FAL++L G F+ K F
Sbjct: 126 EELIIQVLDGKADIVMSDMASNTTGHKATDHIRTLLLCEQAFEFALKVLKPSGHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG N++L +K F+ V H KP +SR+ES E++L+A +
Sbjct: 186 RGGAENELLNKVKCEFKTVKHFKPSSSRSESTEIYLVAINKK 227
>gi|146283283|ref|YP_001173436.1| cell division protein FtsJ [Pseudomonas stutzeri A1501]
gi|145571488|gb|ABP80594.1| cell division protein FtsJ [Pseudomonas stutzeri A1501]
Length = 211
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 83/207 (40%), Positives = 127/207 (61%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SSR WL+ H+NDP+V+RAQ +G R+RS+YKL+++NEK ++++ ++DLGS+PG
Sbjct: 7 KRSKSSRRWLDEHVNDPFVKRAQKDGLRSRSSYKLIELNEKDKLIRPGMLVMDLGSAPGG 66
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVA I G RV+A DIL M + V F + DF + ++ I + G DL+
Sbjct: 67 WSQVAGGIVGEK---GRVLATDILPMGGLDNVDFVQGDFTEDAVFQQILDMLDGRQPDLI 123
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SD+A G D +M L E ++L GG+++VK FQG +++ L ++
Sbjct: 124 VSDIAPNISGVAAADQAASMYLVELTLDMVRQVLKPGGNYVVKVFQGEGSDEFLKDVRSS 183
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F+KV+ KP ASR S E++L+AKGF+
Sbjct: 184 FEKVVIRKPEASRPRSREVYLVAKGFK 210
>gi|253991509|ref|YP_003042865.1| 23S rRNA methyltransferase J [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638387|emb|CAR67009.1| ribosomal rna large subunit methyltransferase j (ec 2.1.1.-) (rrn
(uridine-2'-o-)-methyltransferase) (23s rrna m2u255
methyltransferase) [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782959|emb|CAQ86124.1| ribosomal RNA large subunit methyltransferase [Photorhabdus
asymbiotica]
Length = 209
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + +I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ A N RV+A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYAVSQINEN---GRVIACDLLPMDPIVGVDFLQGDFRDELVLKTLLERVGDNK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALDMCRDVLAPGGSFIVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASRA S E++++A G +
Sbjct: 178 IRSLFTNVKIRKPDASRARSREVYIVATGRK 208
>gi|34499253|ref|NP_903468.1| cell division protein FtsJ [Chromobacterium violaceum ATCC 12472]
gi|81654487|sp|Q7NRI3|RLME_CHRVO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|34105104|gb|AAQ61460.1| cell division protein FtsJ [Chromobacterium violaceum ATCC 12472]
Length = 205
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 96/206 (46%), Positives = 126/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS +WL H+ND YV AQ +G+RAR+AYKLL+IN+K ++++ + DLGS+PGSW
Sbjct: 3 RSKSSNNWLQEHVNDQYVHMAQKDGYRARAAYKLLEINDKDKLIRPGTVLADLGSTPGSW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAARI G +V A+DILDM+P+ GV F + DF + Q + G DLV+
Sbjct: 63 SQVAARIVGEK---GKVFALDILDMDPVPGVDFIQGDFREEAVLREFEQLLDGRALDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G ID R+ LCE A FA + L GG FLVK FQG L +++ F
Sbjct: 120 SDMAPNMSGMSAIDQARSFLLCELALEFARDHLKPGGHFLVKVFQGSDFQPYLKAMRELF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+V+ KP ASR S E++LL KG R
Sbjct: 180 DEVVTRKPKASRDRSSEIYLLGKGRR 205
>gi|148261003|ref|YP_001235130.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidiphilium cryptum
JF-5]
gi|326404403|ref|YP_004284485.1| ribosomal RNA large subunit methyltransferase J [Acidiphilium
multivorum AIU301]
gi|189044083|sp|A5G029|RLME_ACICJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|146402684|gb|ABQ31211.1| 23S rRNA Um-2552 2'-O-methyltransferase [Acidiphilium cryptum JF-5]
gi|325051265|dbj|BAJ81603.1| ribosomal RNA large subunit methyltransferase J [Acidiphilium
multivorum AIU301]
Length = 225
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 98/226 (43%), Positives = 137/226 (60%), Gaps = 5/226 (2%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
M + S RR + R + SS+ WL R +NDPYV A+ G+R+R+A+KL++++E
Sbjct: 1 MTEETIGSRRRAAVRLKAARKHKPSSQKWLLRQLNDPYVAAAKERGFRSRAAFKLIELDE 60
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
K ++ R+VDLG++PG W+QVA +RVV ID+LD++PI G K DF
Sbjct: 61 KFGLIGKGARVVDLGAAPGGWTQVALER-----GASRVVGIDLLDIDPIAGATLIKGDFQ 115
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
D + + +GG D+V+SDMA T GH DHLR M L E A FA + L GG F+
Sbjct: 116 DESMETALAEILGGPADVVMSDMAPNTTGHTATDHLRIMGLAELALDFAFKHLAPGGAFV 175
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K FQGG D+L LLK+ F +V H KP ASR +S E++L+A G+R
Sbjct: 176 TKLFQGGAQGDMLNLLKRRFAQVRHAKPEASRKDSRELYLVATGYR 221
>gi|119774090|ref|YP_926830.1| 23S rRNA methyltransferase J [Shewanella amazonensis SB2B]
gi|143461617|sp|A1S454|RLME_SHEAM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|119766590|gb|ABL99160.1| ribosomal RNA large subunit methyltransferase J [Shewanella
amazonensis SB2B]
Length = 209
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 122/211 (57%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS W+ H +D YV+ AQ G R+R+A+KL ++ EK +++ +VDLG+
Sbjct: 1 MTAKKRSASSTRWMQEHFDDHYVKLAQKRGLRSRAAFKLEELQEKDHLIKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQVA ++ G + +V+A DIL M+PI+GV F + DF + + + +G
Sbjct: 61 APGGWSQVAVKLVG---DRGKVIACDILPMDPIVGVDFLQGDFREDAVLNALLERVGDEK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VLSDMA G +D R M L E A ++L G F VK FQG ++ +
Sbjct: 118 VDVVLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+++ F+ V KP +SRA S E++L+A G++
Sbjct: 178 VREAFKVVKTRKPDSSRARSREVYLVATGYK 208
>gi|158514184|sp|A4VNP3|RLME_PSEU5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|327481681|gb|AEA84991.1| cell division protein FtsJ [Pseudomonas stutzeri DSM 4166]
Length = 206
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 83/207 (40%), Positives = 127/207 (61%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SSR WL+ H+NDP+V+RAQ +G R+RS+YKL+++NEK ++++ ++DLGS+PG
Sbjct: 2 KRSKSSRRWLDEHVNDPFVKRAQKDGLRSRSSYKLIELNEKDKLIRPGMLVMDLGSAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVA I G RV+A DIL M + V F + DF + ++ I + G DL+
Sbjct: 62 WSQVAGGIVGEK---GRVLATDILPMGGLDNVDFVQGDFTEDAVFQQILDMLDGRQPDLI 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SD+A G D +M L E ++L GG+++VK FQG +++ L ++
Sbjct: 119 VSDIAPNISGVAAADQAASMYLVELTLDMVRQVLKPGGNYVVKVFQGEGSDEFLKDVRSS 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F+KV+ KP ASR S E++L+AKGF+
Sbjct: 179 FEKVVIRKPEASRPRSREVYLVAKGFK 205
>gi|114562160|ref|YP_749673.1| 23S rRNA methyltransferase J [Shewanella frigidimarina NCIMB 400]
gi|122300525|sp|Q086I0|RLME_SHEFN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114333453|gb|ABI70835.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella frigidimarina
NCIMB 400]
Length = 209
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 123/211 (58%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS W+ H +D YV+ AQ G R+R+A+KL +I EK +++ +VDLG+
Sbjct: 1 MTTKKRTASSTRWMQEHFDDHYVKLAQKRGLRSRAAFKLEEIQEKDHLIKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQVAA++TG +V+A DIL M+PI+GV F + DF + + + + +
Sbjct: 61 APGGWSQVAAKLTGDK---GKVIACDILPMDPIVGVDFLQGDFREDKVLQALLERVGQDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VLSDMA G +D R M L E A ++L G F VK FQG +D +
Sbjct: 118 VDVVLSDMAPNMSGSGAVDQPRAMYLVELALDMCHQVLTPNGCFAVKVFQGEGFDDYIKT 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+K+ F+ V KP +SRA S E++L+A G++
Sbjct: 178 VKQAFKVVKTRKPDSSRARSREVYLVATGYK 208
>gi|227113766|ref|ZP_03827422.1| 23S rRNA methyltransferase J [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227328603|ref|ZP_03832627.1| 23S rRNA methyltransferase J [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|261820120|ref|YP_003258226.1| 23S rRNA methyltransferase J [Pectobacterium wasabiae WPP163]
gi|261604133|gb|ACX86619.1| ribosomal RNA large subunit methyltransferase J [Pectobacterium
wasabiae WPP163]
Length = 209
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G N R++A DIL M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGN---GRIIACDILPMDPIVGVDFLQGDFRDELVLKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D ++M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPKSMYLVELALGMCRDVLAPGGSFLVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|58040688|ref|YP_192652.1| ribosomal RNA large subunit methyltransferase J [Gluconobacter
oxydans 621H]
gi|81351345|sp|Q5FNQ1|RLME_GLUOX RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|58003102|gb|AAW61996.1| Ribosomal RNA large subunit methyltransferase J [Gluconobacter
oxydans 621H]
Length = 268
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 91/223 (40%), Positives = 141/223 (63%), Gaps = 6/223 (2%)
Query: 5 PGSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
+ + R T ++ R + + WLNR +NDPYV A+ +GWR+R+A+KL++I+++ +
Sbjct: 40 ATARTARNKTVSLRTARGRTTAQQRWLNRQLNDPYVAAARKQGWRSRAAFKLIEIDDRFK 99
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
++ RI+DLG++PG W+QVA + + VV +D+L ++P+ G + + DF D +
Sbjct: 100 LIGEGTRIIDLGAAPGGWTQVAVKRGAKH-----VVGLDLLPVDPVAGAEIIEGDFTDPE 154
Query: 124 SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ ++ +GG DLV+SDMA T GH DH+R M L E A FA ++L GG F+ K
Sbjct: 155 MPDRLKDMLGGPADLVMSDMAPNTTGHAATDHMRIMGLAEGALDFAFQVLAEGGSFIAKV 214
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FQGG+ D+L L+K F V HVKP ASR ES E++++A GFR
Sbjct: 215 FQGGSEKDMLALMKTAFSSVKHVKPPASRKESSELYVIATGFR 257
>gi|311696506|gb|ADP99379.1| ribosomal RNA large subunit methyltransferase J [marine bacterium
HP15]
Length = 206
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL H+NDP+V++AQ++G+R+R++YKLL+IN+K +++ N +VDLGS+PG W
Sbjct: 3 RSKSSNRWLEEHVNDPFVKQAQVDGYRSRASYKLLEINKKDRLIHPNMVVVDLGSAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVL 140
SQVAA++ G RV+A DIL M+ I GV F + DF + D +E + D+V+
Sbjct: 63 SQVAAKLVGHK---GRVIASDILPMDAIAGVDFIQGDFTENDVFESIMATLGDDPVDVVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G D +M L E A A ++L G FL K FQG ++ L ++ F
Sbjct: 120 SDMAPNISGVTVADQASSMYLVELALDMASQVLKPKGSFLAKVFQGEGYDEYLKSVRAVF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV+ KP +SR+ S E+++L KGF+
Sbjct: 180 DKVVVRKPDSSRSRSREVYILGKGFK 205
>gi|229586405|ref|YP_002844906.1| Ribosomal RNA large subunit methyltransferase J [Rickettsia africae
ESF-5]
gi|259494569|sp|C3PMK3|RLME_RICAE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|228021455|gb|ACP53163.1| Ribosomal RNA large subunit methyltransferase J [Rickettsia africae
ESF-5]
Length = 227
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 155/222 (69%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK + SS +WL R +NDPYV +A+++G+R+R+AYKLL+I+EK ++
Sbjct: 6 SGYRNKFVRVKTSKKRTVSSSNWLRRQLNDPYVAKARMDGFRSRAAYKLLEIHEKFKLFT 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANN--TRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N +IVDLG++PG WSQVA+++ ++ NN ++++ID+L++E + GV+F + DF + D+
Sbjct: 66 PNMKIVDLGAAPGGWSQVASKLIKASDNNLNNKIISIDVLEIEHVAGVEFVQKDFFEADT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
E I QA+ G D+V+SDMA TIGH+ DH+RT+ LCE A FAL++L G F+ K F
Sbjct: 126 EELIIQALDGRADIVMSDMASNTIGHKATDHIRTLLLCEQAFEFALKVLKPSGHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG N++L +K+ F+ V H KP +SR+ES E++L+A +
Sbjct: 186 RGGAENELLYKVKREFKTVKHFKPSSSRSESTEIYLVALNKK 227
>gi|50085896|ref|YP_047406.1| cell division protein [Acinetobacter sp. ADP1]
gi|81392452|sp|Q6F8N1|RLME_ACIAD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|49531872|emb|CAG69584.1| cell division protein (filamentous temperature sensitivity, 23S
rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)
[Acinetobacter sp. ADP1]
Length = 216
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 137/216 (63%), Gaps = 4/216 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ H++DP+V++AQ EG+RAR+AYKLL+I EK+++++ +V
Sbjct: 1 MATRITNQKLSKSSRAWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYRLIKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ GS V+A DIL M+ + V F + DF + + +E + +
Sbjct: 61 DLGAAPGSWSQIAGKLVGSK---GLVIASDILAMDTLPDVTFLQGDFREEEVFEKLLNIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G+R +D R + LCE A FA ++L G F+VK FQG ++
Sbjct: 118 NGRTVDIVISDMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPDGQFVVKVFQGSGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + VKP ASRA S E+FL+ +G +K
Sbjct: 178 FRKQVVDSFDVLKTVKPAASRARSKEVFLIGQGRKK 213
>gi|253686966|ref|YP_003016156.1| ribosomal RNA large subunit methyltransferase J [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|259494567|sp|C6DKI3|RLME_PECCP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|251753544|gb|ACT11620.1| ribosomal RNA large subunit methyltransferase J [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 209
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G N R++A DIL M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGN---GRIIACDILPMDPIVGVDFLQGDFRDELVLKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D ++M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPKSMYLVELALGMCRDVLAPGGSFLVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|229592644|ref|YP_002874763.1| cell division protein [Pseudomonas fluorescens SBW25]
gi|259494568|sp|C3K267|RLME_PSEFS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|229364510|emb|CAY52363.1| cell division protein [Pseudomonas fluorescens SBW25]
Length = 216
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S WL H NDPYV++AQ +G+R+R++YKLL+I +K ++++ ++DLG++PG W
Sbjct: 3 RSKTSLKWLQEHFNDPYVKKAQKDGYRSRASYKLLEIQDKDKLIRPGMSVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F DF I +A+G + DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFVHGDFTQDTVLAQILEAVGNSQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFLVK FQG ++ ++K F
Sbjct: 120 SDMAPNMSGLPAVDMPRAMFLCELALDLAGRVLRPGGDFLVKVFQGEGFDEYHKNIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LL +GFR
Sbjct: 180 DKVQTRKPDSSRDRSREQYLLCRGFR 205
>gi|283836275|ref|ZP_06356016.1| ribosomal RNA large subunit methyltransferase J [Citrobacter
youngae ATCC 29220]
gi|291067638|gb|EFE05747.1| ribosomal RNA large subunit methyltransferase J [Citrobacter
youngae ATCC 29220]
Length = 209
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + +I + IVDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTIVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G++ R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYAVTQIGNS---GRIIACDLLPMDPIVGVDFLQGDFRDELVLQALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMCGTPAVDIPRAMYLVELALGMARDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|89072568|ref|ZP_01159140.1| 23S rRNA methylase [Photobacterium sp. SKA34]
gi|90580530|ref|ZP_01236335.1| 23S rRNA methylase [Vibrio angustum S14]
gi|89051672|gb|EAR57125.1| 23S rRNA methylase [Photobacterium sp. SKA34]
gi|90438188|gb|EAS63374.1| 23S rRNA methylase [Photobacterium angustum S14]
Length = 209
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + GSS WL H +D YVQ AQ G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSRKKQSGSSGRWLKEHFDDKYVQEAQKRGYRSRAFFKIEEIQNKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA I GS +V+A DIL M+ + GV F + DF + + + +
Sbjct: 61 APGGWSQYAAEIVGSE---GQVIACDILPMDSLPGVSFLQGDFREEAVLDALLDRIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ D R M L E A ++L G F VK FQG + L
Sbjct: 118 VDVVMSDMAPNMSGNLASDQPRAMYLVELALDMCRQVLAPNGSFTVKVFQGEGFDQYLAE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR S E++++A G++
Sbjct: 178 IRSMFKVVKIRKPDSSRDRSREVYIVATGYK 208
>gi|15892128|ref|NP_359842.1| cell division protein ftsJ [Rickettsia conorii str. Malish 7]
gi|34580841|ref|ZP_00142321.1| cell division protein ftsJ [Rickettsia sibirica 246]
gi|81528508|sp|Q92J64|RLME_RICCN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|15619256|gb|AAL02743.1| cell division protein ftsJ [Rickettsia conorii str. Malish 7]
gi|28262226|gb|EAA25730.1| cell division protein ftsJ [Rickettsia sibirica 246]
Length = 227
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 155/222 (69%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK + SS +WL R +NDPYV +A+++G+R+R+AYKLL+I+EK ++
Sbjct: 6 SGYRNKFVRVKTSKKRTVSSSNWLRRQLNDPYVAKARIDGFRSRAAYKLLEIHEKFKLFT 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANN--TRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N +IVDLG++PG WSQVA+++ ++ NN ++++ID+L++E + GV+F + DF + D+
Sbjct: 66 PNMKIVDLGAAPGGWSQVASKLIKASDNNLNNKIISIDVLEIEHVAGVEFVQKDFFEADT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
E I QA+ G D+V+SDMA TIGH+ DH+RT+ LCE A FAL++L G F+ K F
Sbjct: 126 EELIIQALDGRADIVMSDMASNTIGHKATDHIRTLLLCEQAFEFALKVLKPSGHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG N++L +K+ F+ V H KP +SR+ES E++L+A +
Sbjct: 186 RGGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVALNKK 227
>gi|169632637|ref|YP_001706373.1| cell division protein (filamentous temperature sensitivity, 23S
rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)
[Acinetobacter baumannii SDF]
gi|169794969|ref|YP_001712762.1| cell division protein (filamentous temperature sensitivity, 23S
rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)
[Acinetobacter baumannii AYE]
gi|184159245|ref|YP_001847584.1| 23S rRNA methylase [Acinetobacter baumannii ACICU]
gi|213157620|ref|YP_002320418.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
baumannii AB0057]
gi|215482520|ref|YP_002324708.1| FtsJ-like methyltransferase family protein [Acinetobacter baumannii
AB307-0294]
gi|239503386|ref|ZP_04662696.1| FtsJ-like methyltransferase family protein [Acinetobacter baumannii
AB900]
gi|260549221|ref|ZP_05823441.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter sp.
RUH2624]
gi|260556451|ref|ZP_05828669.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
baumannii ATCC 19606]
gi|301346065|ref|ZP_07226806.1| FtsJ-like methyltransferase family protein [Acinetobacter baumannii
AB056]
gi|301511493|ref|ZP_07236730.1| FtsJ-like methyltransferase family protein [Acinetobacter baumannii
AB058]
gi|301595416|ref|ZP_07240424.1| FtsJ-like methyltransferase family protein [Acinetobacter baumannii
AB059]
gi|332855128|ref|ZP_08435711.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
baumannii 6013150]
gi|332868236|ref|ZP_08438078.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
baumannii 6013113]
gi|332876154|ref|ZP_08443936.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
baumannii 6014059]
gi|158513670|sp|A3M851|RLME_ACIBT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703271|sp|B7GY18|RLME_ACIB3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703272|sp|B7I636|RLME_ACIB5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703273|sp|B2HXD3|RLME_ACIBC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703274|sp|B0VSM4|RLME_ACIBS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703275|sp|B0VEE9|RLME_ACIBY RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|169147896|emb|CAM85759.1| cell division protein (filamentous temperature sensitivity, 23S
rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)
[Acinetobacter baumannii AYE]
gi|169151429|emb|CAP00164.1| cell division protein (filamentous temperature sensitivity, 23S
rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)
[Acinetobacter baumannii]
gi|183210839|gb|ACC58237.1| 23S rRNA methylase [Acinetobacter baumannii ACICU]
gi|193078152|gb|ABO13095.2| cell division protein [Acinetobacter baumannii ATCC 17978]
gi|213056780|gb|ACJ41682.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
baumannii AB0057]
gi|213986569|gb|ACJ56868.1| FtsJ-like methyltransferase family protein [Acinetobacter baumannii
AB307-0294]
gi|260407627|gb|EEX01100.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter sp.
RUH2624]
gi|260409710|gb|EEX03010.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
baumannii ATCC 19606]
gi|322509159|gb|ADX04613.1| Ribosomal RNA large subunit methyltransferase [Acinetobacter
baumannii 1656-2]
gi|323519187|gb|ADX93568.1| 23S rRNA methylase [Acinetobacter baumannii TCDC-AB0715]
gi|325123186|gb|ADY82709.1| cell division protein [Acinetobacter calcoaceticus PHEA-2]
gi|332727631|gb|EGJ59050.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
baumannii 6013150]
gi|332733497|gb|EGJ64667.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
baumannii 6013113]
gi|332735652|gb|EGJ66697.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
baumannii 6014059]
Length = 216
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 87/216 (40%), Positives = 135/216 (62%), Gaps = 4/216 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ H++DP+V++AQ EG+RAR+AYKLL+I EK+++++ +V
Sbjct: 1 MATRITNQKLSKSSRAWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ GS V+A DIL M+ + V F + DF + +E + +
Sbjct: 61 DLGAAPGSWSQIAGKLVGSK---GLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G+R +D R + LCE A FA ++L G F+VK FQG ++
Sbjct: 118 NGRQVDIVISDMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPNGQFVVKVFQGAGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + KP ASRA S E+FL+ +G +K
Sbjct: 178 FRKQVVDSFDVLKTAKPAASRARSKEVFLVGQGRKK 213
>gi|85058348|ref|YP_454050.1| 23S rRNA methyltransferase J [Sodalis glossinidius str.
'morsitans']
gi|123520134|sp|Q2NW30|RLME_SODGM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|84778868|dbj|BAE73645.1| cell division protein [Sodalis glossinidius str. 'morsitans']
Length = 209
Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MATKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFRPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ A G R++A DIL M+P++GV F + DF + + + + +G
Sbjct: 61 APGGWSQYVATQIGGK---GRIIACDILPMDPMVGVDFLQGDFREPLVLQALLERVGEQK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D ++M L E A ++L GG+FLVK FQG ++ L
Sbjct: 118 VQVVVSDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGNFLVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|157828081|ref|YP_001494323.1| cell division protein ftsJ [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932781|ref|YP_001649570.1| 23S rRNA Um2552 2'-O-methyltransferase [Rickettsia rickettsii str.
Iowa]
gi|189040328|sp|B0BWD8|RLME_RICRO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040329|sp|A8GQZ0|RLME_RICRS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|157800562|gb|ABV75815.1| cell division protein ftsJ [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907868|gb|ABY72164.1| 23S rRNA Um2552 2'-O-methyltransferase [Rickettsia rickettsii str.
Iowa]
Length = 227
Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 155/222 (69%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK + SS +WL R +NDPYV +A+++G+R+R+AYKLL+I+EK ++
Sbjct: 6 SGYRNKFVRVKTSKKRTVSSSNWLRRQLNDPYVAKARIDGFRSRAAYKLLEIHEKFKLFT 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANN--TRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N ++VDLG++PG WSQVA+++ ++ NN ++++ID+L++E + GV+F + DF + D+
Sbjct: 66 PNMKVVDLGAAPGGWSQVASKLIKASDNNLNNKIISIDVLEIEHVAGVEFVQKDFFEADT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
E I QA+ G D+V+SDMA TIGH+ DH+RT+ LCE A FAL++L G F+ K F
Sbjct: 126 EELIIQALDGRADIVMSDMASNTIGHKATDHIRTLLLCEQAFEFALKVLKPSGHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG N++L +K+ F+ V H KP +SR+ES E++L+A +
Sbjct: 186 RGGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVALNKK 227
>gi|329893942|ref|ZP_08269977.1| Ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium IMCC3088]
gi|328923397|gb|EGG30714.1| Ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium IMCC3088]
Length = 208
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 89/207 (42%), Positives = 128/207 (61%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WL H +D YVQRAQ EG+R+R+ YKL+++NEK ++L+ +VDLGS+PG
Sbjct: 3 KKKSSSKAWLKEHRDDVYVQRAQKEGYRSRACYKLIELNEKDRLLRPGMTVVDLGSAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVAA I G RV+A DIL M+ + V F + DF + ++ + +AIG P DLV
Sbjct: 63 WSQVAAGIVGVK---GRVIATDILPMDTLEDVDFIQGDFTEEAVFDALLEAIGDEPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D R M L E A A +L G F+ K FQG +++ L++
Sbjct: 120 MSDMAPNMSGMTAVDQPRAMYLVELAVDMASRVLAPKGAFVAKVFQGEGFDELFRSLREQ 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
+Q V+ KP ASR S E++++AKGF+
Sbjct: 180 YQTVLTRKPDASRPRSREVYIVAKGFK 206
>gi|206577505|ref|YP_002236409.1| ribosomal RNA large subunit methyltransferase J [Klebsiella
pneumoniae 342]
gi|288933393|ref|YP_003437452.1| ribosomal RNA large subunit methyltransferase J [Klebsiella
variicola At-22]
gi|290511556|ref|ZP_06550925.1| ribosomal RNA large subunit methyltransferase J [Klebsiella sp.
1_1_55]
gi|226703308|sp|B5XSW2|RLME_KLEP3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|206566563|gb|ACI08339.1| ribosomal RNA large subunit methyltransferase J [Klebsiella
pneumoniae 342]
gi|288888122|gb|ADC56440.1| ribosomal RNA large subunit methyltransferase J [Klebsiella
variicola At-22]
gi|289776549|gb|EFD84548.1| ribosomal RNA large subunit methyltransferase J [Klebsiella sp.
1_1_55]
Length = 209
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + +I + IVDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTIVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G++ R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYAVTQIGNS---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A + ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMCGTPAVDIPRAMYLVELALEMSRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|152972103|ref|YP_001337249.1| 23S rRNA methyltransferase J [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896686|ref|YP_002921431.1| 23S rRNA methyltransferase J [Klebsiella pneumoniae NTUH-K2044]
gi|262042738|ref|ZP_06015892.1| ribosomal RNA large subunit methyltransferase J [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|329997734|ref|ZP_08302902.1| ribosomal RNA large subunit methyltransferase J [Klebsiella sp. MS
92-3]
gi|189040694|sp|A6TEJ8|RLME_KLEP7 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150956952|gb|ABR78982.1| 23S rRNA methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238549013|dbj|BAH65364.1| 23S rRNA methyltransferase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259039963|gb|EEW41080.1| ribosomal RNA large subunit methyltransferase J [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|328538923|gb|EGF64982.1| ribosomal RNA large subunit methyltransferase J [Klebsiella sp. MS
92-3]
Length = 209
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + +I + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G++ R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYAVTQIGNS---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A + ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMCGTPAVDIPRAMYLVELALEMSRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|37528355|ref|NP_931700.1| 23S rRNA methyltransferase J [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|81418111|sp|Q7MYY0|RLME_PHOLL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|36787793|emb|CAE16908.1| Ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552
methyltransferase) (Cell division protein FtsJ)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 209
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + +I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ A ++N RV+A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYAVSQI---SDNGRVIACDLLPMDPIVGVDFLQGDFRDELVLKTLLERVGDNK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALDMCRDVLAPEGSFIVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASRA S E++++A G +
Sbjct: 178 IRSLFTNVKIRKPDASRARSREVYIVATGRK 208
>gi|163750817|ref|ZP_02158052.1| ribosomal RNA large subunit methyltransferase J [Shewanella
benthica KT99]
gi|161329512|gb|EDQ00506.1| ribosomal RNA large subunit methyltransferase J [Shewanella
benthica KT99]
Length = 209
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 80/208 (38%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS WL H +D YV+ AQ G R+R+A+KL +I EK ++++ +VDLG++PG
Sbjct: 4 KKRTASSSRWLQEHFDDHYVKLAQKRGLRSRAAFKLEEIQEKDKLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDL 138
WSQVA ++ G + +V+A DIL M+PI+GV F + DF + + + + G D+
Sbjct: 64 GWSQVAVKLVG---DRGKVIACDILAMDPIVGVDFLQGDFREEKVLDALLTRVGDGKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G ID R M L E A +++ G F VK FQG + + ++
Sbjct: 121 VLSDMAPNMSGSGGIDQPRAMYLVELALDMCHQVMAPNGCFAVKVFQGEGFEEYMKSVRA 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+KV KP +SRA S E++L+A G++
Sbjct: 181 AFKKVKTRKPDSSRARSREVYLVATGYK 208
>gi|237730099|ref|ZP_04560580.1| 23S rRNA methyltransferase [Citrobacter sp. 30_2]
gi|226908705|gb|EEH94623.1| 23S rRNA methyltransferase [Citrobacter sp. 30_2]
Length = 209
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + +I + IVDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTIVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G+ R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYAVTQIGNT---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMCGTPAVDIPRAMYLVELALGMARDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|308189106|ref|YP_003933237.1| cell division protein [Pantoea vagans C9-1]
gi|308059616|gb|ADO11788.1| cell division protein [Pantoea vagans C9-1]
Length = 209
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ + G+ R++A DIL M+PI+GV F + DF + + + +G
Sbjct: 61 APGGWSQYVVQQIGNK---GRIIACDILPMDPIVGVDFLQGDFREESVINALLERVGDQK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALEMCRDILAPGGSFVVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 208
>gi|270265052|ref|ZP_06193315.1| hypothetical protein SOD_k00880 [Serratia odorifera 4Rx13]
gi|270040986|gb|EFA14087.1| hypothetical protein SOD_k00880 [Serratia odorifera 4Rx13]
Length = 209
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G N R++A DIL M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGN---GRIIACDILPMDPIVGVDFLQGDFRDELVLKALLERVGESK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALGMCRDVLAPGGSFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|302382743|ref|YP_003818566.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Brevundimonas
subvibrioides ATCC 15264]
gi|302193371|gb|ADL00943.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Brevundimonas
subvibrioides ATCC 15264]
Length = 224
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 139/229 (60%), Gaps = 8/229 (3%)
Query: 1 MVKPPGSSS--RRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
MVKPP + RG+ K+K SS +W+ R + DP+ ++A+ EGWR+R+A+K +
Sbjct: 1 MVKPPTGGTAAGRGMGGKIKTAEKKSISSIEWIKRQLADPWSEKARAEGWRSRAAFKFSE 60
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I+++ +++ R++DLG++PG W QV VV +D+L +EPI G +
Sbjct: 61 IDDRFHLVKRGSRVIDLGAAPGGWVQVCVNR-----GAASVVGVDLLPIEPIPGSTLIQA 115
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DF D + + +GG PDLVLSDMA+ T+GHR+ DHL+ ++L E A+ FA+ L GG
Sbjct: 116 DFTDPGVDQQLIDLLGGPPDLVLSDMAHNTVGHRQTDHLKIIALIEVASDFAIRTLRPGG 175
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K FQGG +L L+ FQ+V +VKP ASR S E++L+A +
Sbjct: 176 HFVTKNFQGGDAGRVLAELRAAFQEVKYVKPAASRKGSSEVYLVALNRK 224
>gi|262371957|ref|ZP_06065236.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
junii SH205]
gi|262311982|gb|EEY93067.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
junii SH205]
Length = 216
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 137/216 (63%), Gaps = 4/216 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ H++DP+V++AQ EG+RAR+AYKLL+I EK+++++ +V
Sbjct: 1 MATRITNQKLSKSSRAWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKMIKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ GSN V+A DIL M+ + V F + DF + + +E + +
Sbjct: 61 DLGAAPGSWSQIAGKLVGSN---GLVIASDILPMDALPDVTFLQGDFREEEVFEKLLNIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G+R +D R + LCE A FA ++L G F+VK FQG ++
Sbjct: 118 NGRQVDVVISDMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPNGQFIVKVFQGSGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + KP ASRA S E+FL+ +G +K
Sbjct: 178 FRKQVVDSFDVLKTAKPEASRARSKEVFLIGQGRKK 213
>gi|162147649|ref|YP_001602110.1| ribosomal RNA large subunit methyltransferase J [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542278|ref|YP_002274507.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786226|emb|CAP55808.1| putative ribosomal RNA large subunit methyltransferase J
[Gluconacetobacter diazotrophicus PAl 5]
gi|209529955|gb|ACI49892.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gluconacetobacter
diazotrophicus PAl 5]
Length = 264
Score = 198 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 89/222 (40%), Positives = 136/222 (61%), Gaps = 6/222 (2%)
Query: 6 GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQI 64
+ S R ++ R + + WLNR +NDPYVQ A+ +GWR+R+A+KL++++++ +
Sbjct: 36 AAQSTRNQAVSLRTARGRTTAQQRWLNRQLNDPYVQAARKQGWRSRAAFKLIELDDRFHL 95
Query: 65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
++ R++DLG++PG W+QVA + VV +D+L ++P+ G + DF D D
Sbjct: 96 IRPGMRVIDLGAAPGGWTQVAVKR-----GAAYVVGVDLLPVDPVAGATIIEGDFNDPDM 150
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
+ +GG DLVLSDMA T GH DHLR + L E A FA+++L GG F+ K F
Sbjct: 151 PARLIDLLGGPADLVLSDMAPNTTGHAPTDHLRIIGLAELALDFAVKVLAPGGGFVAKVF 210
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
QGG+ +L +K+ F V H KP ASR ES E++++A GFR
Sbjct: 211 QGGSEKQMLAPMKQAFATVRHAKPPASRKESSELYVVATGFR 252
>gi|320540170|ref|ZP_08039825.1| 23S rRNA methyltransferase [Serratia symbiotica str. Tucson]
gi|320029836|gb|EFW11860.1| 23S rRNA methyltransferase [Serratia symbiotica str. Tucson]
Length = 209
Score = 198 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + IVDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTIVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R+VA DIL ++PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIG---GAGRIVACDILPIDPIVGVDFLQGDFRDELVLKALLERVGESK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALEMCRDVLAPGGSFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|325265685|ref|ZP_08132374.1| ribosomal RNA large subunit methyltransferase J [Kingella
denitrificans ATCC 33394]
gi|324982816|gb|EGC18439.1| ribosomal RNA large subunit methyltransferase J [Kingella
denitrificans ATCC 33394]
Length = 213
Score = 198 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 95/206 (46%), Positives = 126/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS W++ H+NDPYVQRAQ +G+RAR+AYKLL+INEK ++++S + DLGS+PGSW
Sbjct: 11 RSKSSPAWMHEHVNDPYVQRAQKDGYRARAAYKLLEINEKDKLIKSGTLLADLGSAPGSW 70
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++ G + +V A+DIL ME I GV F + DF + + +G P DLV+
Sbjct: 71 SQVAAKLVGPS---GQVFALDILPMERIDGVDFIQGDFREDEVLRQFENLLGNRPLDLVI 127
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA L GG FL+K FQG + L ++ F
Sbjct: 128 CDMAPNMSGNAVTDQARSYYLCELALDFARNHLKPGGSFLIKVFQGAGYQEYLAEMRSLF 187
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
Q V KP ASR S E++LL K R
Sbjct: 188 QTVQTRKPDASRNRSSEIYLLGKNKR 213
>gi|239948521|ref|ZP_04700274.1| ribosomal RNA large subunit methyltransferase J [Rickettsia
endosymbiont of Ixodes scapularis]
gi|241563460|ref|XP_002401713.1| cell division protein FtsJ, putative [Ixodes scapularis]
gi|215501905|gb|EEC11399.1| cell division protein FtsJ, putative [Ixodes scapularis]
gi|239922797|gb|EER22821.1| ribosomal RNA large subunit methyltransferase J [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 227
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 103/222 (46%), Positives = 158/222 (71%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK+ + SS +WL R +NDPYV +A++EG+R+R+AYKLL+I+EK ++
Sbjct: 6 SGYRNKFVRVKSSKKRTVSSNNWLKRQLNDPYVAKARIEGFRSRAAYKLLEIHEKFKLFT 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNAN--NTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N +IVDLG++PG WSQVA+++ ++ N N ++++ID+L++EPI GV+FF+ DF + D+
Sbjct: 66 PNMKIVDLGAAPGGWSQVASKLIKASDNSLNNKIISIDLLEIEPIAGVEFFQKDFFEEDT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
E I QA+ G D+V+SDMA TIGH+ DH+RT+ LCE A FAL++L G F+ K F
Sbjct: 126 EELIIQALDGRADIVMSDMASNTIGHKATDHIRTLLLCEQAFEFALKVLKPSGHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG N++L +K+ F+ V H KP +SR+ES E++L+A +
Sbjct: 186 RGGAKNELLNKVKREFRTVKHFKPSSSRSESTEIYLVALNKK 227
>gi|330447384|ref|ZP_08311033.1| 23S rRNA 2'-O-ribose U2552 methyltransferase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328491575|dbj|GAA05530.1| 23S rRNA 2'-O-ribose U2552 methyltransferase [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 209
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + GSS WL H +D YV AQ G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSRKKQSGSSGRWLKEHFDDKYVLEAQKRGYRSRAFFKIEEIQNKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA + G + +V+A DIL M+ + GV F + DF + E + +
Sbjct: 61 APGGWSQYAAEVVG---DEGQVIACDILPMDSLPGVSFLQGDFREEAVLEALLERIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ D R M L E A ++L G F VK FQG + L
Sbjct: 118 VDVVMSDMAPNMSGNLASDQPRAMYLVELALDMCRQVLAPNGSFAVKVFQGEGFDQYLAE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR S E++++A G++
Sbjct: 178 VRSMFKVVKIRKPDSSRDRSREVYIVATGYK 208
>gi|89095222|ref|ZP_01168145.1| cell division protein FtsJ [Oceanospirillum sp. MED92]
gi|89080519|gb|EAR59768.1| cell division protein FtsJ [Oceanospirillum sp. MED92]
Length = 206
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL H +D YV++++ G+R+R+++KL++++EK ++ Q +VDLG++PG W
Sbjct: 3 KSTSSERWLKEHFDDHYVKKSKELGYRSRASFKLIELDEKDKLFQPGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQ+AA G ++ RVVA DIL M+ + GV+F + DF + + I +A+G P DLV+
Sbjct: 63 SQIAAERVG---DHGRVVASDILPMDSMAGVEFVQGDFTEEEVLNRILKALGDEPADLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D M L E A A E+L GG+F+ K FQG + L ++ F
Sbjct: 120 SDMAPNMSGMSAVDQPAAMYLVELALDMAREVLKPGGNFVAKVFQGEGFDQYLKDMRTSF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV+ KP +SRA S E++LL KGF+
Sbjct: 180 NKVVTRKPDSSRARSREVYLLGKGFK 205
>gi|289207887|ref|YP_003459953.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thioalkalivibrio sp.
K90mix]
gi|288943518|gb|ADC71217.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thioalkalivibrio sp.
K90mix]
Length = 208
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 88/205 (42%), Positives = 124/205 (60%), Gaps = 4/205 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS+ WL H +DPYVQRAQ EG+R R+ YKL +I+E+ ++L+ R+VDLG++PG
Sbjct: 3 KRSRSSQRWLKEHFDDPYVQRAQQEGYRGRAVYKLQEIDERDRLLKPGMRVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
W+Q AA+ G +VA DIL M+P+ G DF + + I +A+ G DLV
Sbjct: 63 WTQYAAQKIGRKGG---LVASDILPMDPVPGATIITGDFREDAVLQAILEALDGQRADLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G ID R++ LCE A A ++LN G LVK FQG ++ L +++
Sbjct: 120 LSDMAPNLTGTDAIDQPRSIHLCELALELACDVLNPRGAMLVKLFQGEGSDAYLAEVRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKG 224
F+KV KP ASR S E+++LA+G
Sbjct: 180 FEKVQVRKPQASRPRSREVYVLARG 204
>gi|291616003|ref|YP_003518745.1| RrmJ [Pantoea ananatis LMG 20103]
gi|291151033|gb|ADD75617.1| RrmJ [Pantoea ananatis LMG 20103]
Length = 223
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 15 MTGKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA 74
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ + GS RV+A DIL M+PI+GV F + DF + + + + +G
Sbjct: 75 APGGWSQYVVQQIGSK---GRVIACDILPMDPIVGVDFLQGDFREESVIKALLERVGEQK 131
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 132 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALDMCRDILAPGGSFVVKVFQGDGFDEYLRE 191
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 192 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 222
>gi|91792359|ref|YP_562010.1| 23S rRNA methyltransferase J [Shewanella denitrificans OS217]
gi|123357037|sp|Q12QI9|RLME_SHEDO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91714361|gb|ABE54287.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella denitrificans
OS217]
Length = 209
Score = 198 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ AQ G R+R+A+KL +I +K +++ +VDLG++PG
Sbjct: 4 KKRTASSARWMQEHFDDHYVKLAQKRGLRSRAAFKLEEIQQKDHLIRQGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDL 138
WSQVA ++ G N +V+A DIL M+PI+GV F + DF + + + + D+
Sbjct: 64 GWSQVAVKLAGDN---GKVIACDILPMDPIVGVDFLQGDFREENVLNALLDRVGEDKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG ++ + +K+
Sbjct: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALEMCHQVLAPNGCFAVKVFQGEGFDEYIKSVKQ 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SRA S E++L+A G++
Sbjct: 181 AFKTVKTRKPDSSRARSREVYLVATGYK 208
>gi|296104890|ref|YP_003615036.1| 23S rRNA methyltransferase J [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059349|gb|ADF64087.1| 23S rRNA methyltransferase J [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295097665|emb|CBK86755.1| 23S rRNA Um-2552 2'-O-methyltransferase [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 208
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G R++A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYAVTQIG---GTGRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLDRVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG + L
Sbjct: 118 VQVVMSDMAPNMCGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFEEYLKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFAKVKVRKPDSSRARSREVYIVATGRK 208
>gi|269103413|ref|ZP_06156110.1| 23S rRNA methylase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163311|gb|EEZ41807.1| 23S rRNA methylase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 209
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + GSS WL H +D YV AQ +G+R+R+ +K+ +I +K ++L+ +VDLG+
Sbjct: 1 MSKKKHSGSSGRWLKEHFDDKYVLEAQKKGYRSRALFKIEEIQQKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGN 135
+PG WSQ AA + G ++ +V+A DIL M+P+ GV F + DF + + + +
Sbjct: 61 APGGWSQYAAGVVG---DDGQVIACDILPMDPLPGVSFLQGDFREEAVLDALLERIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VLSDMA G+ D R M L E A ++L G F VK FQG + L
Sbjct: 118 VDVVLSDMAPNMSGNLASDQPRAMYLVELALDMCRQVLAPNGSFAVKVFQGEGFDQYLAD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR S E++++A G++
Sbjct: 178 IRSMFKVVKIRKPDSSRDRSREVYIVATGYK 208
>gi|288941981|ref|YP_003444221.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Allochromatium vinosum
DSM 180]
gi|288897353|gb|ADC63189.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Allochromatium vinosum
DSM 180]
Length = 206
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 100/207 (48%), Positives = 132/207 (63%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SSR WL+RH NDPYV+R Q++G+R+R+AYKLL+I EK IL+ R+VDLG++PGS
Sbjct: 2 SRTKSSRRWLDRHFNDPYVKRVQVDGYRSRAAYKLLEIQEKDPILKPGMRVVDLGAAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQ+A ++ G VVA+DIL MEP+ GV + DF D + +R+AIG P D+V
Sbjct: 62 WSQIARQLVGPEGC---VVALDILPMEPLPGVVVLQGDFRDDEVLSRLREAIGEAPLDVV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A A L GG + K FQG +D + L+
Sbjct: 119 LSDMAPNITGTMVVDQTRAMYLVELALELARSHLKPGGTLVTKVFQGTGFDDYMRELRSS 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F++V KP +SR ES E+FL+AKGFR
Sbjct: 179 FRQVATRKPKSSRTESREVFLVAKGFR 205
>gi|67459510|ref|YP_247134.1| ribosomal RNA large subunit methyltransferase J [Rickettsia felis
URRWXCal2]
gi|75536083|sp|Q4UKG2|RLME_RICFE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|67005043|gb|AAY61969.1| Ribosomal RNA large subunit methyltransferase J [Rickettsia felis
URRWXCal2]
Length = 227
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 101/222 (45%), Positives = 155/222 (69%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK + SS +WL R +NDPYV +A+LEG+R+R+AYKLL+I+ K ++
Sbjct: 6 SGYRNKFVRVKTSKKRTVSSSNWLRRQLNDPYVAKARLEGFRSRAAYKLLEIHGKFKLFN 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNAN--NTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N +IVDLG++PG WSQVA+++ ++ N N ++++ID+L++EPI V+FF+ DF + ++
Sbjct: 66 PNMKIVDLGAAPGGWSQVASKLIKASDNSLNNKIISIDLLEIEPIAEVEFFQKDFFEENT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
E I QA+ G D+V+SDMA TIGH+ DH+RT+ LCE A FAL++L G F+ K F
Sbjct: 126 EELIIQALDGKADIVMSDMASNTIGHKATDHIRTLLLCEQAFEFALKVLKPSGHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG N++L +K+ F+ V H KP +SR+ES E++L+A +
Sbjct: 186 RGGAENELLNKVKREFRTVKHFKPSSSRSESTEIYLVALNKK 227
>gi|238787587|ref|ZP_04631385.1| Ribosomal RNA large subunit methyltransferase J [Yersinia
frederiksenii ATCC 33641]
gi|238724374|gb|EEQ16016.1| Ribosomal RNA large subunit methyltransferase J [Yersinia
frederiksenii ATCC 33641]
Length = 213
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 4/215 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +++ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + +I + +V
Sbjct: 1 MEKEMSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQNDKIFKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 DLGAAPGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLERV 117
Query: 133 -GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+V+SDMA G +D ++M L E A ++L GG FLVK FQG ++
Sbjct: 118 GDKKVQVVMSDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L ++ F KV KP ASRA S E++++A G +
Sbjct: 178 YLREIRSLFTKVKIRKPDASRARSREVYIVATGRK 212
>gi|238761761|ref|ZP_04622735.1| Ribosomal RNA large subunit methyltransferase J [Yersinia
kristensenii ATCC 33638]
gi|238699875|gb|EEP92618.1| Ribosomal RNA large subunit methyltransferase J [Yersinia
kristensenii ATCC 33638]
Length = 213
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 77/215 (35%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +++ N+ GSS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +V
Sbjct: 1 MEKEMSNKKRSGSSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQNDKLFKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQ G RV+A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 DLGAAPGGWSQYVVTQIGGK---GRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERV 117
Query: 133 -GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+V+SDMA G +D ++M L E A ++L GG FLVK FQG ++
Sbjct: 118 GDKKVQVVMSDMAPNMSGTPAVDIPKSMYLVELALEMCRDVLAPGGSFLVKVFQGDGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L ++ F KV KP ASRA S E++++A G +
Sbjct: 178 YLREIRSLFTKVKIRKPDASRARSREVYIVATGRK 212
>gi|238755149|ref|ZP_04616495.1| Ribosomal RNA large subunit methyltransferase J [Yersinia ruckeri
ATCC 29473]
gi|238706596|gb|EEP98967.1| Ribosomal RNA large subunit methyltransferase J [Yersinia ruckeri
ATCC 29473]
Length = 213
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 4/215 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +++ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +V
Sbjct: 1 MEKEMANKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 DLGAAPGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLERV 117
Query: 133 -GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+V+SDMA G +D ++M L E A ++L GG FLVK FQG ++
Sbjct: 118 GEKKVQVVMSDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L ++ F KV KP ASRA S E++++A G +
Sbjct: 178 YLREIRSLFTKVKIRKPDASRARSREVYIVATGRK 212
>gi|294142068|ref|YP_003558046.1| ribosomal RNA large subunit methyltransferase J [Shewanella
violacea DSS12]
gi|293328537|dbj|BAJ03268.1| ribosomal RNA large subunit methyltransferase J [Shewanella
violacea DSS12]
Length = 209
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS WL H +D YV+ AQ G R+R+A+KL +I EK ++++ +VDLG++PG
Sbjct: 4 KKRTASSSRWLQEHFDDHYVKLAQKRGLRSRAAFKLEEIQEKDKLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDL 138
WSQVA ++ G + +V+A DIL M+PI+GV F + DF + + + + G D+
Sbjct: 64 GWSQVAVKLAG---DRGKVIACDILAMDPIVGVDFLQGDFREEKVLDALLTRVGDGKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A +++ G F VK FQG + + ++
Sbjct: 121 VLSDMAPNMSGTGGVDQPRAMYLVELALDMCHQVMAPNGCFAVKVFQGEGFEEYMKSVRA 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SRA S E++L+A G++
Sbjct: 181 AFKTVKTRKPDSSRARSREVYLVATGYK 208
>gi|238650351|ref|YP_002916203.1| cell division protein ftsJ [Rickettsia peacockii str. Rustic]
gi|259494570|sp|C4K0Q4|RLME_RICPU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|238624449|gb|ACR47155.1| cell division protein ftsJ [Rickettsia peacockii str. Rustic]
Length = 227
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 155/222 (69%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK + SS +WL R +NDPYV +A+++G+R+R+AYKLL+I+EK ++
Sbjct: 6 SGYRNKFVRVKTSKKRTVSSSNWLRRQLNDPYVAKARIDGFRSRAAYKLLEIHEKFKLFI 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANN--TRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N +IVDLG++PG WSQVA+++ ++ NN ++++ID+L++E + GV+F + DF + D+
Sbjct: 66 PNMKIVDLGAAPGGWSQVASKLIKASDNNLNNKIISIDVLEIEHVAGVEFVQKDFFEADT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
E I QA+ G D+V+SDMA TIGH+ DH+RT+ LCE A FAL++L G F+ K F
Sbjct: 126 EELIIQALDGRADIVMSDMASNTIGHKATDHIRTLLLCEQAFEFALKVLKPSGHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG N++L +K+ F+ V H KP +SR+ES E++L+A +
Sbjct: 186 RGGAENELLHKVKREFKTVKHFKPSSSRSESTEIYLVALNKK 227
>gi|238797559|ref|ZP_04641056.1| Ribosomal RNA large subunit methyltransferase J [Yersinia
mollaretii ATCC 43969]
gi|238718556|gb|EEQ10375.1| Ribosomal RNA large subunit methyltransferase J [Yersinia
mollaretii ATCC 43969]
Length = 209
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ GSS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MSNKKRSGSSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQNDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G+ RV+A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYAVTQIGAK---GRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+ DMA G +D ++M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMCDMAPNMSGTPAVDIPKSMYLVELALEMCRDVLAPGGSFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|327396254|dbj|BAK13676.1| ribosomal RNA large subunit methyltransferase J RrmJ [Pantoea
ananatis AJ13355]
Length = 209
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ + GS RV+A DIL M+PI+GV F + DF + + + + +G
Sbjct: 61 APGGWSQYVVQQIGSK---GRVIACDILPMDPIVGVDFLQGDFREESVIKALLERVGEQK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALDMCRDILAPGGSFVVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 208
>gi|311277847|ref|YP_003940078.1| ribosomal RNA large subunit methyltransferase J [Enterobacter
cloacae SCF1]
gi|308747042|gb|ADO46794.1| ribosomal RNA large subunit methyltransferase J [Enterobacter
cloacae SCF1]
Length = 209
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G N R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYAVTQIGGN---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALQMCRDVLAPGGSFLVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP +SRA S E++++A G +
Sbjct: 178 IRSLFTTVKVRKPDSSRARSREVYIVATGRK 208
>gi|238793015|ref|ZP_04636644.1| Ribosomal RNA large subunit methyltransferase J [Yersinia
intermedia ATCC 29909]
gi|238727615|gb|EEQ19140.1| Ribosomal RNA large subunit methyltransferase J [Yersinia
intermedia ATCC 29909]
Length = 213
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 120/215 (55%), Gaps = 4/215 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +++ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +V
Sbjct: 1 MEKEMSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQNDKLFKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 DLGAAPGGWSQYVVSQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLERV 117
Query: 133 -GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+V+SDMA G +D ++M L E A ++L GG FLVK FQG ++
Sbjct: 118 GDKKVQVVMSDMAPNMCGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L ++ F KV KP ASRA S E++++A G +
Sbjct: 178 YLREIRSLFTKVKIRKPDASRARSREVYIVATGRK 212
>gi|91205935|ref|YP_538290.1| ribosomal RNA large subunit methyltransferase J [Rickettsia bellii
RML369-C]
gi|157826704|ref|YP_001495768.1| ribosomal RNA large subunit methyltransferase J [Rickettsia bellii
OSU 85-389]
gi|122425326|sp|Q1RHG3|RLME_RICBR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040326|sp|A8GV60|RLME_RICB8 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91069479|gb|ABE05201.1| Ribosomal RNA large subunit methyltransferase J [Rickettsia bellii
RML369-C]
gi|157802008|gb|ABV78731.1| Ribosomal RNA large subunit methyltransferase J [Rickettsia bellii
OSU 85-389]
Length = 227
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 102/222 (45%), Positives = 153/222 (68%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK + SS +WL R +NDPYV +A++EG+R+R+AYKLL+I+EK +I
Sbjct: 6 SGYRNKFVRVKTSKKRTVSSSNWLRRQLNDPYVAKARIEGFRSRAAYKLLEIHEKFKIFT 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANN--TRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N ++VDLG++PG WSQVA+++ + N +++++D+L++EPI GV+ F+ DF + D+
Sbjct: 66 PNMKVVDLGAAPGGWSQVASKLIKATDGNLKNKIISVDLLEIEPIPGVESFQKDFFEKDT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
E I QA+ G D+VLSDMA TIGH+ DH+RT+ LCE A FAL++LN G F+ K F
Sbjct: 126 EELIIQALKGKADIVLSDMASNTIGHKATDHIRTLLLCEQAFEFALKVLNPSGHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG N++L +K+ F V H KP +SR ES E++L+A +
Sbjct: 186 RGGAENELLNKVKREFSTVKHFKPSSSRKESTEIYLVALNRK 227
>gi|157368729|ref|YP_001476718.1| 23S rRNA methyltransferase J [Serratia proteamaculans 568]
gi|189040332|sp|A8G900|RLME_SERP5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|157320493|gb|ABV39590.1| ribosomal RNA large subunit methyltransferase J [Serratia
proteamaculans 568]
Length = 209
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G + R++A DIL M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGS---GRIIACDILPMDPIVGVDFLQGDFRDELVLKALLERVGESK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALGMCRDVLAPGGSFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|146313247|ref|YP_001178321.1| 23S rRNA methyltransferase J [Enterobacter sp. 638]
gi|189040690|sp|A4WEZ0|RLME_ENT38 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|145320123|gb|ABP62270.1| 23S rRNA Um-2552 2'-O-methyltransferase [Enterobacter sp. 638]
Length = 208
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + IVDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTIVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYAVTQIG---GQGRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A + ++L GG F+VK FQG + L
Sbjct: 118 VQVVMSDMAPNMCGTPAVDIPRSMYLVELALEMSRDVLAPGGSFVVKVFQGEGFEEYLKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFAKVKVRKPDSSRARSREVYIVATGRK 208
>gi|156935701|ref|YP_001439617.1| 23S rRNA methyltransferase J [Cronobacter sakazakii ATCC BAA-894]
gi|156533955|gb|ABU78781.1| hypothetical protein ESA_03570 [Cronobacter sakazakii ATCC BAA-894]
Length = 213
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 4/215 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + +I + +V
Sbjct: 1 MECEMTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 DLGAAPGGWSQYVVTQIG---GAGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERV 117
Query: 133 -GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++
Sbjct: 118 GDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L ++ F KV KP +SRA S E++++A G +
Sbjct: 178 YLREIRSLFTKVKVRKPDSSRARSREVYIVATGRK 212
>gi|251791042|ref|YP_003005763.1| 23S rRNA methyltransferase J [Dickeya zeae Ech1591]
gi|247539663|gb|ACT08284.1| ribosomal RNA large subunit methyltransferase J [Dickeya zeae
Ech1591]
Length = 209
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQTDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A DIL M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRIIACDILPMDPIVGVDFLQGDFRDELVLKALLERVGDDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDILAPGGSFVVKVFQGVGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASRA S E++++A G +
Sbjct: 178 IRSLFTTVKIRKPDASRARSREVYIVATGRK 208
>gi|322831208|ref|YP_004211235.1| ribosomal RNA large subunit methyltransferase J [Rahnella sp.
Y9602]
gi|321166409|gb|ADW72108.1| ribosomal RNA large subunit methyltransferase J [Rahnella sp.
Y9602]
Length = 209
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MSNKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G+ R++A+D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVATQIGNK---GRIIALDLLPMDPIVGVDFLQGDFRDELVLKALLERVGESK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D ++M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|53803869|ref|YP_114286.1| ribosomal RNA large subunit methyltransferase J [Methylococcus
capsulatus str. Bath]
gi|81681781|sp|Q607B2|RLME_METCA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|53757630|gb|AAU91921.1| ribosomal RNA large subunit methyltransferase J [Methylococcus
capsulatus str. Bath]
Length = 210
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 125/207 (60%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS WL H +D YV+ AQ +G+R+R+ +KL++++E ++ ++DLG++PG
Sbjct: 3 KRSRSSGRWLAEHFSDEYVRLAQEKGYRSRAVFKLMELDEHDRLFAPGTTVIDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQ AAR G++ RV+A+D+L MEP+ GV + DFLD + + +AIGG D+V
Sbjct: 63 WSQYAARRVGAS---GRVLALDMLPMEPLPGVTVVQGDFLDDAVFHAMLEAIGGRRVDVV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G+R +D R+M L E A A +L G F+VK FQG + + +K
Sbjct: 120 LSDMAPNMSGNRNVDQPRSMYLAELAFDLAERVLGPKGSFVVKLFQGEGFQEYVARARKA 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASRA S E++L+ KG+R
Sbjct: 180 FGSVGMRKPKASRARSAEIYLVGKGYR 206
>gi|312963090|ref|ZP_07777575.1| Ribosomal RNA large subunit methyltransferase E [Pseudomonas
fluorescens WH6]
gi|311282601|gb|EFQ61197.1| Ribosomal RNA large subunit methyltransferase E [Pseudomonas
fluorescens WH6]
Length = 216
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S WL H NDPYV++AQ +G+R+R++YKLL++ +K ++ + ++DLG++PG W
Sbjct: 3 RSKTSLKWLQEHFNDPYVKKAQKDGYRSRASYKLLELQDKDKLFRPGMSVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVA+R+ G R++A DIL+M+ I V F DF I +A+G + DLV+
Sbjct: 63 SQVASRLIG---GQGRLIASDILEMDSIPDVTFVHGDFTQDAVLAQILEAVGNSQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFLVK FQG ++ ++K F
Sbjct: 120 SDMAPNMSGLPAVDMPRAMFLCELALDLAGRVLRPGGDFLVKVFQGEGFDEYHKNIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPDSSRDRSREQYLLARGFR 205
>gi|304396340|ref|ZP_07378221.1| ribosomal RNA large subunit methyltransferase J [Pantoea sp. aB]
gi|304355849|gb|EFM20215.1| ribosomal RNA large subunit methyltransferase J [Pantoea sp. aB]
Length = 209
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV +A +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSGRWLQEHFSDKYVLQAHKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ + G+ RV+A DIL M+PI+GV F + DF + + + +G
Sbjct: 61 APGGWSQYVVQQIGNK---GRVIACDILPMDPIVGVDFLQGDFREESVINALLERVGDQK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALEMCRDILAPGGSFVVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 208
>gi|255318895|ref|ZP_05360121.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
radioresistens SK82]
gi|262378850|ref|ZP_06072007.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
radioresistens SH164]
gi|255304151|gb|EET83342.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
radioresistens SK82]
gi|262300135|gb|EEY88047.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
radioresistens SH164]
Length = 216
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 87/216 (40%), Positives = 136/216 (62%), Gaps = 4/216 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ H++DP+V++AQ EG+RAR+AYKLL+I EK+++++ +V
Sbjct: 1 MATRITNQKLSKSSRAWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ G V+A DIL M+ + V F + DF + + +E + +
Sbjct: 61 DLGAAPGSWSQIAGKLVGDK---GLVIASDILPMDALADVTFLQGDFREEEVFEKLLNIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G+R +D R + LCE A FA ++L G F+VK FQG ++
Sbjct: 118 NGRQVDVVISDMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPNGQFVVKVFQGAGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + VKP ASRA S E+FL+ +G +K
Sbjct: 178 FRKQVVDSFDVLKTVKPAASRARSKEVFLIGQGRKK 213
>gi|299769010|ref|YP_003731036.1| FtsJ-like methyltransferase family protein [Acinetobacter sp. DR1]
gi|298699098|gb|ADI89663.1| FtsJ-like methyltransferase family protein [Acinetobacter sp. DR1]
Length = 216
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 136/216 (62%), Gaps = 4/216 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ H++DP+V++AQ EG+RAR+AYKLL+I EK+++++ +V
Sbjct: 1 MATRITNQKLSKSSRAWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ GS V+A DIL M+ + V F + DF + D +E + +
Sbjct: 61 DLGAAPGSWSQIAGKLVGSK---GLVIASDILPMDALPDVSFLQGDFREEDVFEKLLNIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G+R +D R + LCE A FA ++L G +VK FQG ++
Sbjct: 118 NGRQVDIVISDMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPNGQLVVKVFQGAGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + VKP ASRA S E+FL+ +G +K
Sbjct: 178 FRKQVVDSFDVLKTVKPAASRARSKEVFLVGQGRKK 213
>gi|238757569|ref|ZP_04618754.1| Ribosomal RNA large subunit methyltransferase J [Yersinia aldovae
ATCC 35236]
gi|238704331|gb|EEP96863.1| Ribosomal RNA large subunit methyltransferase J [Yersinia aldovae
ATCC 35236]
Length = 209
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQNDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G RV+A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYAVTQIGGK---GRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+ DMA G +D ++M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMCDMAPNMSGTPAVDIPKSMYLVELALEMCRDVLAPGGSFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|261342622|ref|ZP_05970480.1| ribosomal RNA large subunit methyltransferase J [Enterobacter
cancerogenus ATCC 35316]
gi|288315270|gb|EFC54208.1| ribosomal RNA large subunit methyltransferase J [Enterobacter
cancerogenus ATCC 35316]
Length = 208
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G R++A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYAVTQIG---GTGRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLDRVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A + ++L GG F+VK FQG + L
Sbjct: 118 VQVVMSDMAPNMCGTPAVDIPRAMYLVELALEMSRDVLAPGGSFVVKVFQGEGFEEYLKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFAKVKVRKPDSSRARSREVYIVATGRK 208
>gi|110772930|ref|XP_001123010.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like,
partial [Apis mellifera]
Length = 225
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/209 (43%), Positives = 135/209 (64%), Gaps = 5/209 (2%)
Query: 18 KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSS 77
K + S + WL R +NDPYV+ AQ GWR+R+AYKL+++N+K L+ ++VDLG++
Sbjct: 14 KTKGRSTSQQRWLTRQLNDPYVKAAQQHGWRSRAAYKLIELNDKFHFLKKGIKVVDLGAA 73
Query: 78 PGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPD 137
PG WSQVA ++VV ID+L +EP++G F+ DF + + E + + G D
Sbjct: 74 PGGWSQVAV-----YHKASKVVGIDLLQVEPVMGADIFQGDFTEPHNLEVLLDKLEGKAD 128
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
LV+SDMA T GH DH+R ++L E A FA+++LN+ G F+ K FQGG+ +L LK
Sbjct: 129 LVMSDMAPNTTGHAATDHIRIVNLTEQALDFAIKILNLNGVFIAKVFQGGSEKLMLNNLK 188
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+ V H KP ASR ES E++++A GF+
Sbjct: 189 RSFKIVKHAKPPASRKESRELYVIATGFK 217
>gi|315127241|ref|YP_004069244.1| 23S rRNA methyltransferase J [Pseudoalteromonas sp. SM9913]
gi|315015755|gb|ADT69093.1| 23S rRNA methyltransferase J [Pseudoalteromonas sp. SM9913]
Length = 209
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS+ WL H +D YVQ AQ +GWR+R+ +KL +I K ++L+ +VDLG+
Sbjct: 1 MTNKKQSASSQRWLKEHFDDKYVQEAQKKGWRSRAVFKLDEIQNKDKLLRPAMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PGSWSQ A G +VVA DIL M+ + GV F + DF + + + + I G
Sbjct: 61 APGSWSQYLAEKVGDK---GQVVACDILPMDSLAGVDFLQGDFREEAVLDALLKRIDGKN 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VLSDMA G+ +D +M L E A ++L G F+VK FQG + L
Sbjct: 118 VDVVLSDMAPNMSGNNSVDQAGSMYLVELALDMCNQVLKKNGAFIVKVFQGEGFDQYLQD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP ASR S E++++A G++
Sbjct: 178 VRNSFKAVKIRKPDASRPRSREVYIVATGYK 208
>gi|304321737|ref|YP_003855380.1| 23S rRNA methylase [Parvularcula bermudensis HTCC2503]
gi|303300639|gb|ADM10238.1| 23S rRNA methylase [Parvularcula bermudensis HTCC2503]
Length = 244
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 110/219 (50%), Positives = 144/219 (65%), Gaps = 4/219 (1%)
Query: 9 SRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS 67
+ R LT+KVK R + SS+ WL R +NDPYV RA+ EG+R+R+AYKLL+++EK +L+
Sbjct: 22 AARELTEKVKTARGRKISSKLWLERQLNDPYVARARAEGFRSRAAYKLLELDEKFGLLRP 81
Query: 68 NRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF 127
R+VDLG++PG WSQVA R +VV ID LDM P+ GV K DFLD D+
Sbjct: 82 GARVVDLGAAPGGWSQVAGRAVLPG---GQVVGIDYLDMPPLDGVTLLKADFLDEDTPGR 138
Query: 128 IRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
+R +GG LVLSDMA PT GH+ DHLR ++L EAA FA +L GG ++ K QGG
Sbjct: 139 LRAVLGGPAHLVLSDMAAPTTGHKSTDHLRIVALAEAALDFAETVLAPGGGYVAKVLQGG 198
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +L LK F V H KP ASRAES EM+++A G+R
Sbjct: 199 SEKSLLDRLKADFTDVAHAKPSASRAESAEMYVVATGYR 237
>gi|50119645|ref|YP_048812.1| 23S rRNA methyltransferase J [Pectobacterium atrosepticum SCRI1043]
gi|81646184|sp|Q6D9B9|RLME_ERWCT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|49610171|emb|CAG73611.1| ribosomal RNA large subunit methyltransferase [Pectobacterium
atrosepticum SCRI1043]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A DIL M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDILPMDPIVGVDFLQGDFRDELVLKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D ++M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPKSMYLVELALGMCRDVLAPGGSFLVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|260596194|ref|YP_003208765.1| 23S rRNA methyltransferase J [Cronobacter turicensis z3032]
gi|189040699|sp|A7MIM8|RLME_ENTS8 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|260215371|emb|CBA27387.1| Ribosomal RNA large subunit methyltransferase J [Cronobacter
turicensis z3032]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + +I + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIG---GAGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|300721530|ref|YP_003710805.1| 23 S rRNA methyltransferase [Xenorhabdus nematophila ATCC 19061]
gi|297628022|emb|CBJ88571.1| 23 S rRNA methyltransferase [Xenorhabdus nematophila ATCC 19061]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + +I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQSDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ G++ RV+A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGNS---GRVIACDLLPMDPIVGVDFLQGDFRDELVLKTLLERVGDNK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLIELALDMCRDVLAPGGSFIVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F K+ KP ASRA S E++++A G +
Sbjct: 178 IRSLFAKIKIRKPEASRARSREVYIVATGRK 208
>gi|269137756|ref|YP_003294456.1| 23S rRNA methyltransferase J [Edwardsiella tarda EIB202]
gi|267983416|gb|ACY83245.1| 23S rRNA methyltransferase J [Edwardsiella tarda EIB202]
gi|304557813|gb|ADM40477.1| Cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase J [Edwardsiella tarda FL6-60]
Length = 208
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS WL H +D YVQ+AQ +G R+R+ +KL +I +I + +VDLG++PG
Sbjct: 3 KKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQGSDKIFRPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDL 138
WSQ G R++A D+L M+PI+GV F + DF D + + +
Sbjct: 63 GWSQYVVTQIGDK---GRIIACDLLPMDPIVGVDFLQGDFRDELVLGALMERVGDAKVQV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R+M L E A A ++L GG F+VK FQG ++ L ++
Sbjct: 120 VMSDMAPNMSGTPSVDIPRSMYLVELALEMAKDVLAPGGSFVVKVFQGEGFDEYLGQIRS 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV KP ASRA S E++++A G +
Sbjct: 180 LFTKVKIRKPDASRARSREVYIVATGRK 207
>gi|157964230|ref|YP_001499054.1| ribosomal RNA large subunit methyltransferase J [Rickettsia
massiliae MTU5]
gi|157844006|gb|ABV84507.1| Ribosomal RNA large subunit methyltransferase J [Rickettsia
massiliae MTU5]
Length = 272
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 158/223 (70%), Gaps = 4/223 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK + SS +WL R +NDPYV +A+++G+R+R+AYKLL+I+EK ++
Sbjct: 50 SGYRNKFIRVKTSKKRTVSSSNWLRRQLNDPYVAKARIDGFRSRAAYKLLEIHEKFKLFT 109
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNAN--NTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N +IVDLG++PG WSQVA+++ ++ N N ++++ID+L++EP+ GV+FF+ DF + D+
Sbjct: 110 PNMKIVDLGAAPGGWSQVASKLIKASDNNLNNKIISIDVLEIEPVAGVEFFQKDFFEADT 169
Query: 125 WEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
E I QA+ G+ D+V+SDMA TIGH+ DH+RT+ LCE A FAL++L G F+ K
Sbjct: 170 EELIIQALDGSRADIVMSDMASNTIGHKATDHIRTLLLCEQAFEFALKVLKPSGHFIAKI 229
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+GG N++L +K+ F+ V H KP +SR+ES E++L+A +
Sbjct: 230 FRGGAENELLNKVKREFKTVKHFKPSSSRSESTEIYLVALNKK 272
>gi|271499167|ref|YP_003332192.1| ribosomal RNA large subunit methyltransferase J [Dickeya dadantii
Ech586]
gi|270342722|gb|ACZ75487.1| ribosomal RNA large subunit methyltransferase J [Dickeya dadantii
Ech586]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQTDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKTLLERVGDEK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDILAPGGSFVVKVFQGVGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASRA S E++++A G +
Sbjct: 178 IRSLFTTVKIRKPDASRARSREVYIVATGRK 208
>gi|83644093|ref|YP_432528.1| 23S rRNA methylase [Hahella chejuensis KCTC 2396]
gi|123534482|sp|Q2SMM1|RLME_HAHCH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83632136|gb|ABC28103.1| 23S rRNA methylase [Hahella chejuensis KCTC 2396]
Length = 206
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 80/207 (38%), Positives = 123/207 (59%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS WLN H +D YV++++ +G+R+R++YKL++++ + ++L+ ++DLG++PG
Sbjct: 2 GRSKSSSRWLNEHHSDVYVKKSKEDGFRSRASYKLIELDRQDKLLRPGMTVIDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI-RQAIGGNPDLV 139
WSQV A + G + +VVA D+L M+ I GV FF+ DF + + + I + DLV
Sbjct: 62 WSQVVADVVG---DQGKVVACDLLSMDSIAGVTFFQGDFTEDEMLDAILNEVNSRPVDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G + +D + M L E A A +L G F+ K FQG + IL +
Sbjct: 119 ISDMAPNMSGMKSVDIPKAMYLVELALDLACRVLKKNGCFVAKVFQGEGFDQILQESRGR 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASRA S E++L+AKGFR
Sbjct: 179 FSSVNIRKPDASRARSREIYLVAKGFR 205
>gi|262278061|ref|ZP_06055846.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
calcoaceticus RUH2202]
gi|262258412|gb|EEY77145.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
calcoaceticus RUH2202]
Length = 216
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 89/216 (41%), Positives = 136/216 (62%), Gaps = 4/216 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ H++DP+V++AQ EG+RAR+AYKLL+I EK+++++ +V
Sbjct: 1 MATRITNQKLSKSSRVWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ GS VVA DIL M+ + V F + DF + D +E + +
Sbjct: 61 DLGAAPGSWSQIAGKLVGSK---GLVVASDILPMDALPDVTFLQGDFREEDVFEKLLNIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G+R +D R + LCE A FA ++L G F+VK FQG ++
Sbjct: 118 NGRQVDIVISDMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPNGQFVVKVFQGTGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + KP ASRA S E+FL+ +G +K
Sbjct: 178 FRKQVVDSFDVLKTAKPAASRARSKEVFLIGQGRKK 213
>gi|119471556|ref|ZP_01613970.1| 23S rRNA methyltransferase [Alteromonadales bacterium TW-7]
gi|119445499|gb|EAW26785.1| 23S rRNA methyltransferase [Alteromonadales bacterium TW-7]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS+ WL H +D YVQ AQ +GWR+R+ +KL ++ + ++L+ +VDLG+
Sbjct: 1 MTNKKQSASSQRWLKEHFDDKYVQEAQKKGWRSRAVFKLDEVQNRDKLLRPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PGSWSQ A G +VVA DIL M+ + GV F + DF + + + + I G
Sbjct: 61 APGSWSQYLAEKVGDK---GQVVACDILPMDSLAGVDFLQGDFREEAVLDALLKRIDGKN 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VLSDMA G+ +D +M L E A ++L G F+VK FQG + L
Sbjct: 118 VDVVLSDMAPNMSGNNSVDQAGSMYLVELALDMCNQVLKKNGAFIVKVFQGEGFDQYLQE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP ASRA S E++++A G++
Sbjct: 178 VRNSFKAVKIRKPDASRARSREVYIVATGYK 208
>gi|294634507|ref|ZP_06713042.1| ribosomal RNA large subunit methyltransferase J [Edwardsiella tarda
ATCC 23685]
gi|291092021|gb|EFE24582.1| ribosomal RNA large subunit methyltransferase J [Edwardsiella tarda
ATCC 23685]
Length = 208
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS WL H +D YVQ+AQ +G R+R+ +KL +I +I + +VDLG++PG
Sbjct: 3 KKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQGTDKIFRPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDL 138
WSQ G RV+A D+L M+PI+GV F + DF D + + +G +
Sbjct: 63 GWSQYVVTQIGDK---GRVIACDLLPMDPIVGVDFLQGDFRDELVLAALMERVGDAKVQV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A A ++L GG F+VK FQG ++ L ++
Sbjct: 120 VMSDMAPNMSGTPSVDIPRAMYLVELALEMAKDVLAPGGSFVVKVFQGEGFDEYLGQIRS 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV KP ASRA S E++++A G +
Sbjct: 180 LFTKVKIRKPEASRARSREVYIVATGRK 207
>gi|292486828|ref|YP_003529698.1| cell division protein [Erwinia amylovora CFBP1430]
gi|292900773|ref|YP_003540142.1| ribosomal RNA large subunit methyltransferase J [Erwinia amylovora
ATCC 49946]
gi|291200621|emb|CBJ47753.1| ribosomal RNA large subunit methyltransferase J [Erwinia amylovora
ATCC 49946]
gi|291552245|emb|CBA19282.1| cell division protein [Erwinia amylovora CFBP1430]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQGDKLFKHGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ GS RV+A DIL M+PI+GV F + DF D + + + +G
Sbjct: 61 APGGWSQYVVTQIGSK---GRVIACDILPMDPIVGVDFLQGDFRDELVLKALLEHVGDTK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M LCE A ++L GG FLVK FQG + L
Sbjct: 118 VQVVMSDMAPNMTGTPAVDIPRSMYLCELALEMCRDVLAPGGSFLVKVFQGDGFEEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 208
>gi|226951533|ref|ZP_03821997.1| cell division protein (filamentous temperature sensitivity, 23S
rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)
[Acinetobacter sp. ATCC 27244]
gi|226837725|gb|EEH70108.1| cell division protein (filamentous temperature sensitivity, 23S
rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)
[Acinetobacter sp. ATCC 27244]
Length = 216
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 89/216 (41%), Positives = 138/216 (63%), Gaps = 4/216 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ H++DP+V++AQ EG+RAR+AYKLL+I EK+++++ +V
Sbjct: 1 MAIRITNQKLSKSSRAWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKMIKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ GSN V+A DIL+M+ + V F + DF + D +E + +
Sbjct: 61 DLGAAPGSWSQIAGKLVGSN---GLVIASDILEMDALPDVTFLQGDFREEDVFEKLLNIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G+R +D R + LCE A FA ++L G F+VK FQG ++
Sbjct: 118 NGRQVDVVISDMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPNGQFVVKVFQGSGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + KP ASRA S E+FL+ +G +K
Sbjct: 178 FRKQVVDSFDVLKTAKPAASRARSKEVFLIGQGRKK 213
>gi|262369449|ref|ZP_06062777.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
johnsonii SH046]
gi|262315517|gb|EEY96556.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
johnsonii SH046]
Length = 216
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 86/216 (39%), Positives = 137/216 (63%), Gaps = 4/216 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ H++D +V++AQ EG+RAR+AYKLL+I EK+ I++ +V
Sbjct: 1 MATRITNQKLSKSSRAWMREHLDDHFVKKAQKEGYRARAAYKLLEIQEKYNIIRPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ G + VVA DIL+M+ + V F + DF + + ++ + +
Sbjct: 61 DLGAAPGSWSQIAGKLVG---DRGLVVASDILEMDALPDVTFLQGDFREQEVFDKLLNIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G++ +D R + LCE A FA ++L G F+VK FQG ++
Sbjct: 118 DGRKVDVVISDMAPNTSGNKAVDQPRQIYLCELAIDFATKVLGPNGQFVVKVFQGTGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ +F + VKP ASRA S E+FL+ +G +K
Sbjct: 178 FRKQVVDNFDVLKTVKPAASRARSKEVFLVGQGRKK 213
>gi|162419181|ref|YP_001608279.1| 23S rRNA methyltransferase J [Yersinia pestis Angola]
gi|165928158|ref|ZP_02223990.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165937481|ref|ZP_02226044.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Orientalis str. IP275]
gi|166011366|ref|ZP_02232264.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166214008|ref|ZP_02240043.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167401245|ref|ZP_02306745.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167420655|ref|ZP_02312408.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167423579|ref|ZP_02315332.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|270489129|ref|ZP_06206203.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
KIM D27]
gi|294505365|ref|YP_003569427.1| cell division protein [Yersinia pestis Z176003]
gi|21957398|gb|AAM84269.1|AE013670_6 cell division protein [Yersinia pestis KIM 10]
gi|45435291|gb|AAS60850.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Microtus str. 91001]
gi|162351996|gb|ABX85944.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
Angola]
gi|165914586|gb|EDR33200.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Orientalis str. IP275]
gi|165919845|gb|EDR37146.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165989750|gb|EDR42051.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166204803|gb|EDR49283.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166961461|gb|EDR57482.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167049270|gb|EDR60678.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167057749|gb|EDR67495.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|262363431|gb|ACY60152.1| cell division protein [Yersinia pestis D106004]
gi|262367195|gb|ACY63752.1| cell division protein [Yersinia pestis D182038]
gi|270337633|gb|EFA48410.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
KIM D27]
gi|294355824|gb|ADE66165.1| cell division protein [Yersinia pestis Z176003]
Length = 213
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 77/215 (35%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +++ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +V
Sbjct: 1 MEKEMSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQSDKLFKQGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQ A GS RV+A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 DLGAAPGGWSQYAVTQIGSK---GRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERV 117
Query: 133 -GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+V+ DMA G +D ++M L E A ++L GG FLVK FQG ++
Sbjct: 118 GDKKVQVVMCDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L ++ F KV KP ASRA S E++++A G +
Sbjct: 178 YLREIRSLFTKVKIRKPDASRARSREVYIVATGRK 212
>gi|307129377|ref|YP_003881393.1| cell division protein ftsJ/Ribosomal RNA large subunit
methyltransferase J [Dickeya dadantii 3937]
gi|306526906|gb|ADM96836.1| Cell division protein ftsJ / Ribosomal RNA large subunit
methyltransferase J [Dickeya dadantii 3937]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQTDRLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKTLLERVGDEK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G ++D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPEVDIPRAMYLVELALDMCRDILAPGGSFVVKVFQGVGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASRA S E++++A G +
Sbjct: 178 IRSLFTTVKIRKPDASRARSREVYIVATGRK 208
>gi|192359469|ref|YP_001983134.1| ribosomal RNA large subunit J [Cellvibrio japonicus Ueda107]
gi|226703290|sp|B3PLQ4|RLME_CELJU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|190685634|gb|ACE83312.1| ribosomal RNA large subunit J [Cellvibrio japonicus Ueda107]
Length = 211
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 80/205 (39%), Positives = 120/205 (58%), Gaps = 4/205 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL H +D YV+++ +G+R R++YKLL++N+K ++++ +VDLG++PG W
Sbjct: 3 RSKSSNRWLEEHFSDQYVKKSHADGYRTRASYKLLELNDKDRLIRPGMLVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI-RQAIGGNPDLVL 140
SQVA + G+ + RVVA DIL M+ + GV+F + DF D + I DLV+
Sbjct: 63 SQVAGQQVGT---HGRVVASDILPMDTLEGVEFIQGDFTDDSVFNQILLAIGDTPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D + M L E A A +L G+F+ K F G + L LK F
Sbjct: 120 SDMAPNMSGINAVDQPQAMYLVELALDMAKRVLKPQGNFVAKVFHGEGYDQYLKDLKGCF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+KV+ KP ASR+ S E++++ KGF
Sbjct: 180 EKVVIRKPDASRSRSREVYVVGKGF 204
>gi|318607368|emb|CBY28866.1| cell division protein FtsJ; ribosomal RNA large subunit
methyltransferase E [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGDK---GRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+ DMA G +D ++M L E A ++L GG+FLVK FQG ++ L
Sbjct: 118 VQVVMCDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGNFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|170727902|ref|YP_001761928.1| 23S rRNA methyltransferase J [Shewanella woodyi ATCC 51908]
gi|226705315|sp|B1KRR8|RLME_SHEWM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|169813249|gb|ACA87833.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella woodyi ATCC
51908]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ AQ G+R+R+A+K+ +I EK ++++ +VDLG++PG
Sbjct: 4 KKRTASSSRWMQEHFDDHYVKLAQKRGFRSRAAFKIEEIQEKDKLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDL 138
WSQVA ++ G N +V+A DIL M+PI+GV F + DF + + + +G D+
Sbjct: 64 GWSQVAVKLAGDN---GKVIACDILPMDPIVGVDFLQGDFREEKVLDALLTRVGDAKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG + + +++
Sbjct: 121 VLSDMAPNMSGTGGVDQPRAMYLVELALDMCHQVLAPNGCFAVKVFQGEGFEEYMKSVRE 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SR S E++L+A G++
Sbjct: 181 AFKTVKTRKPDSSRPRSREVYLVATGYK 208
>gi|259907035|ref|YP_002647391.1| 23S rRNA methyltransferase J [Erwinia pyrifoliae Ep1/96]
gi|224962657|emb|CAX54112.1| Ribosomal RNA large subunit methyltransferase [Erwinia pyrifoliae
Ep1/96]
gi|283476831|emb|CAY72669.1| cell division protein [Erwinia pyrifoliae DSM 12163]
gi|310766247|gb|ADP11197.1| 23S rRNA methyltransferase J [Erwinia sp. Ejp617]
Length = 209
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQGDKLFKHGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ GS RV+A DIL M+PI+GV F + DF + + + + +G
Sbjct: 61 APGGWSQYVVTQIGSK---GRVIACDILPMDPIVGVDFLQGDFREELVLKALLERVGDTQ 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M LCE A ++L GG FLVK FQG + L
Sbjct: 118 VQVVMSDMAPNMTGTPAVDIPRSMYLCELALEMCRDVLAPGGSFLVKVFQGDGFEEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 208
>gi|332160072|ref|YP_004296649.1| 23S rRNA methyltransferase J [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664302|gb|ADZ40946.1| 23S rRNA methyltransferase J [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862037|emb|CBX72203.1| ribosomal RNA large subunit methyltransferase J [Yersinia
enterocolitica W22703]
Length = 209
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+ DMA G +D ++M L E A ++L GG+FLVK FQG ++ L
Sbjct: 118 VQVVMCDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGNFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|209694183|ref|YP_002262111.1| 23S rRNA methyltransferase J [Aliivibrio salmonicida LFI1238]
gi|226703281|sp|B6END5|RLME_ALISL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|208008134|emb|CAQ78276.1| ribosomal RNA large subunit methyltransferase J (cell division
protein FtsJ) [Aliivibrio salmonicida LFI1238]
Length = 209
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ SS WL H +D YV AQ G+R+R+ +KL +I K ++L+ +VDLG+
Sbjct: 1 MSKNKLSASSGRWLKEHFDDKYVLEAQKRGYRSRAIFKLEEIQNKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ A G ++ +V+A DIL M+ I GV F + DF + + + +
Sbjct: 61 APGGWSQYAVEQVG---DSGQVIACDILAMDSIAGVSFLQGDFREEAVLDALLERIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R+M L E A ++L G F VK FQG + + L
Sbjct: 118 VDVVMSDMAPNMSGNPSVDQPRSMYLVELALDMCRQVLAPNGSFTVKVFQGESFDAYLQE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++K F+ V KP +SRA S E++++A G++
Sbjct: 178 VRKVFKVVKIRKPDSSRARSREVYIVATGYK 208
>gi|319638318|ref|ZP_07993081.1| ribosomal RNA large subunit methyltransferase J [Neisseria mucosa
C102]
gi|317400591|gb|EFV81249.1| ribosomal RNA large subunit methyltransferase J [Neisseria mucosa
C102]
Length = 206
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 119/206 (57%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+IN+K ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINQKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++ G V A+DIL M+ I GV F + DF + E + P DLV+
Sbjct: 64 SQVAAKLVG---KTGAVFALDILPMDAIDGVSFIQGDFREDAVLEQFEALLDNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + + F
Sbjct: 121 CDMAPNMSGNAVTDQARSFYLCELALDFASQHLKPGGSFLVKVFQGAGYQEYTAAMSEIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 ASVQTRKPDASRNRSSEIYLLGKNKR 206
>gi|294651175|ref|ZP_06728507.1| cell division protein [Acinetobacter haemolyticus ATCC 19194]
gi|292822928|gb|EFF81799.1| cell division protein [Acinetobacter haemolyticus ATCC 19194]
Length = 216
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 138/216 (63%), Gaps = 4/216 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ H++DP+V++AQ EG+RAR+AYKLL+I EK+++++ +V
Sbjct: 1 MAIRITNQKLSKSSRAWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKMIKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ GSN V+A DIL+M+ + V F + DF + + +E + +
Sbjct: 61 DLGAAPGSWSQIAGKLVGSN---GLVIASDILEMDALPDVTFLQGDFREEEVFEKLLNIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G+R +D R + LCE A FA ++L G F+VK FQG ++
Sbjct: 118 NGRQVDVVISDMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPNGQFVVKVFQGSGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + KP ASRA S E+FL+ +G +K
Sbjct: 178 FRKQVVDSFDVLKTAKPAASRARSKEVFLIGQGRKK 213
>gi|157803350|ref|YP_001491899.1| ribosomal RNA large subunit methyltransferase J [Rickettsia
canadensis str. McKiel]
gi|189040327|sp|A8EXN1|RLME_RICCK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|157784613|gb|ABV73114.1| Ribosomal RNA large subunit methyltransferase J [Rickettsia
canadensis str. McKiel]
Length = 227
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 155/222 (69%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK R SS +WL R +NDPYV +A+ +G+R+R+AYKLL+I+EK ++
Sbjct: 6 SGYRNKFVRVKTSRKRTVSSNNWLRRQLNDPYVAKARTQGFRSRAAYKLLEIHEKFKLFT 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNAN--NTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N +IVDLG++PG WSQ+A+++ ++ N N ++++ID+L++ PI+GV+FF+ DF + D+
Sbjct: 66 PNMKIVDLGAAPGGWSQIASKLIKASDNSLNNKIISIDLLEIRPIVGVEFFQKDFFEEDT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
+ I QA+ G ++V+SDMA TIGH+ DH+RT+ LCE A FAL++L G F+ K F
Sbjct: 126 EKLIIQALDGKANIVMSDMASNTIGHKATDHIRTLLLCEQALEFALKVLKPSGHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG N +L +K F+ V H KP++SR+ES E++L+A +
Sbjct: 186 RGGAENKLLNKVKHEFRTVKHFKPLSSRSESTEIYLVALNKK 227
>gi|188532497|ref|YP_001906294.1| 23S rRNA methyltransferase J [Erwinia tasmaniensis Et1/99]
gi|226703304|sp|B2VGT0|RLME_ERWT9 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|188027539|emb|CAO95386.1| Ribosomal RNA large subunit methyltransferase [Erwinia tasmaniensis
Et1/99]
Length = 209
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ GS RV+A DIL M+PI+GV F + DF + + + + +G
Sbjct: 61 APGGWSQYVVTQIGSK---GRVIACDILPMDPIVGVDFLQGDFREELVLKALLERVGETK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M LCE A ++L GG FLVK FQG + L
Sbjct: 118 VQVVMSDMAPNMTGTPAVDIPRSMYLCELALAMCRDVLAPGGSFLVKVFQGDGFEEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 208
>gi|260869930|ref|YP_003236332.1| 23S rRNA methyltransferase [Escherichia coli O111:H- str. 11128]
gi|257766286|dbj|BAI37781.1| 23S rRNA methyltransferase [Escherichia coli O111:H- str. 11128]
gi|323178645|gb|EFZ64221.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
1180]
gi|324115217|gb|EGC09181.1| ribosomal RNA large subunit methyltransferase J [Escherichia
fergusonii B253]
gi|325498760|gb|EGC96619.1| 23S rRNA methyltransferase J [Escherichia fergusonii ECD227]
Length = 209
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVNQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|170719899|ref|YP_001747587.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas putida W619]
gi|226705301|sp|B1J262|RLME_PSEPW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|169757902|gb|ACA71218.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas putida W619]
Length = 208
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS +WL H NDP+V++AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 4 RSKSSANWLREHFNDPFVKQAQKDGYRSRASYKLLEIQEKDRLIRPGMSVIDLGAAPGGW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + + I A+G + DLV+
Sbjct: 64 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTQDEVLQQILDAVGDSHVDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G ++D R M LCE A A +L GGDFL+K FQG + L ++ F
Sbjct: 121 SDMAPNMSGTPEVDMPRAMFLCELALDLATRVLKPGGDFLIKIFQGEGFDMYLKDVRTKF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LL KGF+
Sbjct: 181 DKVQMRKPSSSRDRSREQYLLGKGFK 206
>gi|104780020|ref|YP_606518.1| 23S rRNA U2552 ribose 2'-O-methyltransferase [Pseudomonas
entomophila L48]
gi|143461104|sp|Q1IF51|RLME_PSEE4 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|95109007|emb|CAK13703.1| 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent
[Pseudomonas entomophila L48]
Length = 208
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS +WL H NDP+V++AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 4 RSKSSANWLREHFNDPFVKQAQKDGYRSRASYKLLEIQEKDRLIRPGMSVIDLGAAPGGW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + + I QA+G + DLV+
Sbjct: 64 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTQDEVLQQILQAVGDSHVDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + L ++ F
Sbjct: 121 SDMAPNMSGTPAVDMPRAMFLCELALDLATRVLKPGGDFLIKIFQGEGFDMYLKDVRSKF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LL KGF+
Sbjct: 181 DKVQMRKPSSSRDRSREQYLLGKGFK 206
>gi|325276157|ref|ZP_08141962.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas sp. TJI-51]
gi|324098694|gb|EGB96735.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas sp. TJI-51]
Length = 208
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS +WL H NDP+V++AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 4 RSKSSANWLREHFNDPFVKQAQKDGYRSRASYKLLEIQEKDRLIRPGMSVIDLGAAPGGW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + + I A+G + DLV+
Sbjct: 64 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDAVLQQILDAVGDSHVDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G ++D R M LCE A A +L GGDFL+K FQG + L ++ F
Sbjct: 121 SDMAPNMSGTPEVDMPRAMFLCELALDLATRVLKPGGDFLIKIFQGEGFDMYLKDVRTKF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LL KGF+
Sbjct: 181 DKVQMRKPSSSRDRSREQYLLGKGFK 206
>gi|170765486|ref|ZP_02900297.1| ribosomal RNA large subunit methyltransferase J [Escherichia
albertii TW07627]
gi|170124632|gb|EDS93563.1| ribosomal RNA large subunit methyltransferase J [Escherichia
albertii TW07627]
Length = 209
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMQALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|238918417|ref|YP_002931931.1| 23S rRNA methyltransferase J [Edwardsiella ictaluri 93-146]
gi|259494565|sp|C5BFB0|RLME_EDWI9 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|238867985|gb|ACR67696.1| ribosomal RNA large subunit methyltransferase J, putative
[Edwardsiella ictaluri 93-146]
Length = 208
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS WL H +D YVQ+AQ +G R+R+ +KL +I +I + +VDLG++PG
Sbjct: 3 KKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQGTDKIFRPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDL 138
WSQ G RV+A D+L M+PI+GV F + DF D + + +G +
Sbjct: 63 GWSQYVVTQIGDK---GRVIACDLLPMDPIVGVDFLQGDFRDELVLAALMERVGDAKVQV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A A ++L GG F+VK FQG ++ L ++
Sbjct: 120 VMSDMAPNMSGTPSVDIPRAMYLVELAFEMAKDVLAPGGSFVVKVFQGEGFDEYLGQIRS 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV KP ASRA S E++++A G +
Sbjct: 180 LFTKVKIRKPEASRARSREVYIVATGRK 207
>gi|123440806|ref|YP_001004797.1| 23S rRNA methyltransferase J [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|143462176|sp|A1JIW2|RLME_YERE8 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|122087767|emb|CAL10553.1| ribosomal RNA large subunit methyltransferase J [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 209
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+ DMA G +D ++M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMCDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|308050591|ref|YP_003914157.1| 23S rRNA Um-2552 2'-O-methyltransferase [Ferrimonas balearica DSM
9799]
gi|307632781|gb|ADN77083.1| 23S rRNA Um-2552 2'-O-methyltransferase [Ferrimonas balearica DSM
9799]
Length = 209
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS+ WL H +D YV++AQ +G R+R+ +KL +I K ++L+ ++VDLG+
Sbjct: 1 MTKKKHSASSKRWLTEHFDDQYVKKAQKQGLRSRAVFKLEEIQGKDRLLKPGMKVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ A G + V+A DIL M+PI GV F + DF + +
Sbjct: 61 APGGWSQYATEQVGQDGM---VIACDILPMDPIAGVDFLQGDFREEAVLNALLTHIGDEK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG + L
Sbjct: 118 VDVVMSDMAPNFSGAGAVDQPRAMYLVELAFDMCHQVLKKNGAFVVKVFQGEGFDQYLQE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP +SRA S E++++A G++
Sbjct: 178 VRSVFGNVKIRKPDSSRARSREVYIVASGYK 208
>gi|238783522|ref|ZP_04627544.1| Ribosomal RNA large subunit methyltransferase J [Yersinia
bercovieri ATCC 43970]
gi|238715577|gb|EEQ07567.1| Ribosomal RNA large subunit methyltransferase J [Yersinia
bercovieri ATCC 43970]
Length = 209
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ GSS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MSNKKRSGSSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQNDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D ++M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPKSMYLVELALEMCRDVLAPGGSFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|167625067|ref|YP_001675361.1| 23S rRNA methyltransferase J [Shewanella halifaxensis HAW-EB4]
gi|189040337|sp|B0TQB0|RLME_SHEHH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|167355089|gb|ABZ77702.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella halifaxensis
HAW-EB4]
Length = 209
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ AQ G R+R+A+K+ +I EK ++++ +VDLG++PG
Sbjct: 4 KKRTASSSRWMQEHFDDHYVKLAQKRGLRSRAAFKIEEIQEKDKLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDL 138
WSQVA ++ G +V+A DIL M+PI+GV F + DF + + + +G D+
Sbjct: 64 GWSQVAVKLAGDK---GKVIACDILPMDPIVGVDFLQGDFREEKVLDALLTRVGDAKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG ++ + +K+
Sbjct: 121 VLSDMAPNMSGTGGVDQPRAMYLVELALDMCHQVLAPNGCFAVKVFQGEGFDEYMKAVKE 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SR S E++L+A G++
Sbjct: 181 AFKTVKTRKPDSSRPRSREVYLVATGYK 208
>gi|212634066|ref|YP_002310591.1| 23S rRNA methyltransferase J [Shewanella piezotolerans WP3]
gi|226705314|sp|B8CKG5|RLME_SHEPW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|212555550|gb|ACJ28004.1| Ribosomal RNA large subunit methyltransferase J [Shewanella
piezotolerans WP3]
Length = 209
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ AQ G+R+R+A+K+ +I EK ++++ +VDLG++PG
Sbjct: 4 KKRTASSSRWMQEHFDDHYVKLAQKRGFRSRAAFKIEEIQEKDKLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDL 138
WSQVA ++ G +V+A DIL M+PI+GV F + DF + + + +G D+
Sbjct: 64 GWSQVAVKLAGDK---GKVIACDILPMDPIVGVDFLQGDFREEKVLDALLTRVGDAKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG ++ + +K+
Sbjct: 121 VLSDMAPNMSGTGGVDQPRAMYLVELALDMCHQVLAPNGCFAVKVFQGEGFDEYMKAVKE 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SR S E++L+A G++
Sbjct: 181 AFKTVKTRKPDSSRPRSREVYLVATGYK 208
>gi|315179213|gb|ADT86127.1| 23S rRNA methyltransferase J [Vibrio furnissii NCTC 11218]
Length = 209
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV A+ +G+R+R+ +K+ +I K ++LQ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLQPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA I G + +V+A DIL M+ I GV F + DF + + + +
Sbjct: 61 APGGWSQYAAGIVGES---GQVIACDILPMDSIAGVSFLQGDFREEAVLDALLERIQPNM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQYVKD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E++++A G++
Sbjct: 178 VRDMFKAVKIRKPDSSRARSREVYIVATGYK 208
>gi|221066109|ref|ZP_03542214.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
KF-1]
gi|264679344|ref|YP_003279251.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
CNB-2]
gi|299532303|ref|ZP_07045696.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
S44]
gi|220711132|gb|EED66500.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
KF-1]
gi|262209857|gb|ACY33955.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
CNB-2]
gi|298719711|gb|EFI60675.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Comamonas testosteroni
S44]
Length = 220
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 130/219 (59%), Gaps = 7/219 (3%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
K K +S + + ++WL+ HINDPYV+ AQ +G+RAR+AYKL +I+E +++Q +VDL
Sbjct: 1 MKTKTKSKKVN-KNWLHDHINDPYVKAAQKDGYRARAAYKLKEIDESLKLIQPGHTVVDL 59
Query: 75 GSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
G +PG+WSQ R + N R++++D+L MEPI GV + + DF + +
Sbjct: 60 GCAPGAWSQYVRRRLSPSGAAVGELNGRIISLDLLPMEPIEGVHYIQGDFREEAVLAQLE 119
Query: 130 QAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
+A+GG D+V+SDMA GH D R L E A FA+ + G +VK F G
Sbjct: 120 EAMGGGKADVVVSDMAPNLSGHGATDGARVAVLIEMAVDFAINNMKPEGALVVKLFHGSG 179
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
N+++ L K+ F+ V +KP ASR S E+FL+ G ++
Sbjct: 180 YNELVDLFKQTFKVVKPIKPKASRDRSAEIFLVGMGLKQ 218
>gi|229520927|ref|ZP_04410349.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae TM 11079-80]
gi|229342160|gb|EEO07156.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae TM 11079-80]
Length = 239
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 4/212 (1%)
Query: 16 KVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLG 75
K+ + SS WL H +D YV A+ +G+R+R+ +K+ +I K ++L++ +VDLG
Sbjct: 30 KMSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLG 89
Query: 76 SSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGG 134
++PG WSQ AA++ G RV+A D+L ME I GV F + DF + + +
Sbjct: 90 AAPGGWSQFAAKVVGEG---GRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPD 146
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG +D +
Sbjct: 147 MVDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVK 206
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR+ S E+F++A G++
Sbjct: 207 AVRDLFKVVKIRKPDSSRSRSREVFIVATGYK 238
>gi|15803719|ref|NP_289753.1| 23S rRNA methyltransferase J [Escherichia coli O157:H7 EDL933]
gi|15833312|ref|NP_312085.1| 23S rRNA methyltransferase J [Escherichia coli O157:H7 str. Sakai]
gi|16131069|ref|NP_417646.1| 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent
[Escherichia coli str. K-12 substr. MG1655]
gi|24114468|ref|NP_708978.1| 23S rRNA methyltransferase J [Shigella flexneri 2a str. 301]
gi|26249762|ref|NP_755802.1| 23S rRNA methyltransferase J [Escherichia coli CFT073]
gi|30064517|ref|NP_838688.1| 23S rRNA methyltransferase J [Shigella flexneri 2a str. 2457T]
gi|74313716|ref|YP_312135.1| 23S rRNA methyltransferase J [Shigella sonnei Ss046]
gi|82545583|ref|YP_409530.1| 23S rRNA methyltransferase J [Shigella boydii Sb227]
gi|89109942|ref|AP_003722.1| 23S rRNA methyltransferase [Escherichia coli str. K-12 substr.
W3110]
gi|91212600|ref|YP_542586.1| 23S rRNA methyltransferase J [Escherichia coli UTI89]
gi|110643419|ref|YP_671149.1| 23S rRNA methyltransferase J [Escherichia coli 536]
gi|110807045|ref|YP_690565.1| 23S rRNA methyltransferase J [Shigella flexneri 5 str. 8401]
gi|117625473|ref|YP_858796.1| 23S rRNA methyltransferase J [Escherichia coli APEC O1]
gi|157148748|ref|YP_001456067.1| 23S rRNA methyltransferase J [Citrobacter koseri ATCC BAA-895]
gi|157158192|ref|YP_001464654.1| 23S rRNA methyltransferase J [Escherichia coli E24377A]
gi|157162662|ref|YP_001459980.1| 23S rRNA methyltransferase J [Escherichia coli HS]
gi|168754160|ref|ZP_02779167.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4401]
gi|168765485|ref|ZP_02790492.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4501]
gi|168781322|ref|ZP_02806329.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4076]
gi|168786064|ref|ZP_02811071.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC869]
gi|170018571|ref|YP_001723525.1| 23S rRNA methyltransferase J [Escherichia coli ATCC 8739]
gi|170082714|ref|YP_001732034.1| 23S rRNA methyltransferase [Escherichia coli str. K-12 substr.
DH10B]
gi|170681323|ref|YP_001745451.1| 23S rRNA methyltransferase J [Escherichia coli SMS-3-5]
gi|187730342|ref|YP_001881906.1| 23S rRNA methyltransferase J [Shigella boydii CDC 3083-94]
gi|188494253|ref|ZP_03001523.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
53638]
gi|191168046|ref|ZP_03029846.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
B7A]
gi|191172201|ref|ZP_03033744.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
F11]
gi|194430230|ref|ZP_03062728.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
B171]
gi|195938398|ref|ZP_03083780.1| 23S rRNA methyltransferase J [Escherichia coli O157:H7 str. EC4024]
gi|208807870|ref|ZP_03250207.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4206]
gi|208812489|ref|ZP_03253818.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4045]
gi|208820270|ref|ZP_03260590.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4042]
gi|209395973|ref|YP_002272649.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4115]
gi|209920654|ref|YP_002294738.1| 23S rRNA methyltransferase J [Escherichia coli SE11]
gi|215488495|ref|YP_002330926.1| 23S rRNA methyltransferase J [Escherichia coli O127:H6 str.
E2348/69]
gi|217327701|ref|ZP_03443784.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. TW14588]
gi|218550462|ref|YP_002384253.1| 23S rRNA methyltransferase J [Escherichia fergusonii ATCC 35469]
gi|218555749|ref|YP_002388662.1| 23S rRNA methyltransferase J [Escherichia coli IAI1]
gi|218560249|ref|YP_002393162.1| 23S rRNA methyltransferase J [Escherichia coli S88]
gi|218691469|ref|YP_002399681.1| 23S rRNA methyltransferase J [Escherichia coli ED1a]
gi|218696884|ref|YP_002404551.1| 23S rRNA methyltransferase J [Escherichia coli 55989]
gi|218701948|ref|YP_002409577.1| 23S rRNA methyltransferase J [Escherichia coli IAI39]
gi|218706799|ref|YP_002414318.1| 23S rRNA methyltransferase J [Escherichia coli UMN026]
gi|227887900|ref|ZP_04005705.1| 23S rRNA methyltransferase J [Escherichia coli 83972]
gi|237706069|ref|ZP_04536550.1| ribosomal RNA large subunit methyltransferase J [Escherichia sp.
3_2_53FAA]
gi|238902281|ref|YP_002928077.1| 23S rRNA methyltransferase [Escherichia coli BW2952]
gi|253771987|ref|YP_003034818.1| 23S rRNA methyltransferase J [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254038344|ref|ZP_04872402.1| ribosomal RNA large subunit methyltransferase J [Escherichia sp.
1_1_43]
gi|254163121|ref|YP_003046229.1| 23S rRNA methyltransferase J [Escherichia coli B str. REL606]
gi|254795128|ref|YP_003079965.1| 23S rRNA methyltransferase J [Escherichia coli O157:H7 str.
TW14359]
gi|256018902|ref|ZP_05432767.1| 23S rRNA methyltransferase J [Shigella sp. D9]
gi|256024246|ref|ZP_05438111.1| 23S rRNA methyltransferase J [Escherichia sp. 4_1_40B]
gi|260845992|ref|YP_003223770.1| 23S rRNA methyltransferase [Escherichia coli O103:H2 str. 12009]
gi|260857306|ref|YP_003231197.1| 23S rRNA methyltransferase [Escherichia coli O26:H11 str. 11368]
gi|261228190|ref|ZP_05942471.1| 23S rRNA methyltransferase [Escherichia coli O157:H7 str. FRIK2000]
gi|261255046|ref|ZP_05947579.1| 23S rRNA methyltransferase [Escherichia coli O157:H7 str. FRIK966]
gi|291284553|ref|YP_003501371.1| Ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) [Escherichia coli
O55:H7 str. CB9615]
gi|293406788|ref|ZP_06650714.1| rrmJ [Escherichia coli FVEC1412]
gi|293416609|ref|ZP_06659248.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
B185]
gi|293449513|ref|ZP_06663934.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
B088]
gi|297520551|ref|ZP_06938937.1| 23S rRNA methyltransferase J [Escherichia coli OP50]
gi|298382529|ref|ZP_06992126.1| rrmJ [Escherichia coli FVEC1302]
gi|300817568|ref|ZP_07097784.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 107-1]
gi|300823857|ref|ZP_07103981.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 119-7]
gi|300897944|ref|ZP_07116322.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 198-1]
gi|300904366|ref|ZP_07122218.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 84-1]
gi|300918937|ref|ZP_07135495.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 115-1]
gi|300926080|ref|ZP_07141899.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 182-1]
gi|300929871|ref|ZP_07145316.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 187-1]
gi|300938091|ref|ZP_07152868.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 21-1]
gi|300948830|ref|ZP_07162897.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 116-1]
gi|300955765|ref|ZP_07168109.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 175-1]
gi|300980088|ref|ZP_07174838.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 200-1]
gi|300990826|ref|ZP_07179353.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 45-1]
gi|301022034|ref|ZP_07185977.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 69-1]
gi|301025976|ref|ZP_07189459.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 196-1]
gi|301047977|ref|ZP_07195020.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 185-1]
gi|301301763|ref|ZP_07207897.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 124-1]
gi|301326396|ref|ZP_07219752.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 78-1]
gi|301644890|ref|ZP_07244861.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 146-1]
gi|306816479|ref|ZP_07450611.1| 23S rRNA methyltransferase J [Escherichia coli NC101]
gi|307139865|ref|ZP_07499221.1| 23S rRNA methyltransferase J [Escherichia coli H736]
gi|307313116|ref|ZP_07592742.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
W]
gi|309793756|ref|ZP_07688182.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 145-7]
gi|312968483|ref|ZP_07782692.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
2362-75]
gi|312972547|ref|ZP_07786721.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
1827-70]
gi|331643877|ref|ZP_08345008.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
H736]
gi|331648979|ref|ZP_08350067.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
M605]
gi|331654783|ref|ZP_08355783.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
M718]
gi|331659466|ref|ZP_08360408.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
TA206]
gi|331664791|ref|ZP_08365696.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
TA143]
gi|331670006|ref|ZP_08370851.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
TA271]
gi|331679258|ref|ZP_08379930.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
H591]
gi|331684826|ref|ZP_08385418.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
H299]
gi|332279990|ref|ZP_08392403.1| 23S rRNA methyltransferase [Shigella sp. D9]
gi|83287968|sp|P0C0R8|RLME_ECO57 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83287969|sp|P0C0R9|RLME_ECOL6 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83287970|sp|P0C0R7|RLME_ECOLI RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=Cell division protein ftsJ; AltName:
Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83287971|sp|P0C0S0|RLME_SHIFL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|122422294|sp|Q1R6F9|RLME_ECOUT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|122957976|sp|Q0TCT1|RLME_ECOL5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|123342473|sp|Q0T0A5|RLME_SHIF8 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|123558569|sp|Q31W56|RLME_SHIBS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|123616070|sp|Q3YX62|RLME_SHISS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|143459881|sp|A1AG82|RLME_ECOK1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040334|sp|A7ZS75|RLME_ECO24 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040685|sp|A8AQ68|RLME_CITK8 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040688|sp|A8A4Z3|RLME_ECOHS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040689|sp|B1IQU4|RLME_ECOLC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703296|sp|B7MBU8|RLME_ECO45 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703297|sp|B5YS68|RLME_ECO5E RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703298|sp|B7NKP6|RLME_ECO7I RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703299|sp|B7M085|RLME_ECO8A RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703300|sp|B1XGY9|RLME_ECODH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703301|sp|B7NDG3|RLME_ECOLU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703302|sp|B6I1Q2|RLME_ECOSE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703303|sp|B1LFS9|RLME_ECOSM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703305|sp|B7LR46|RLME_ESCF3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705316|sp|B2U1Z8|RLME_SHIB3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809551|sp|B7UJ72|RLME_ECO27 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809552|sp|B7LHP2|RLME_ECO55 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809553|sp|B7N363|RLME_ECO81 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|259494564|sp|C4ZSR8|RLME_ECOBW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|12517791|gb|AAG58313.1|AE005546_7 cell division protein [Escherichia coli O157:H7 str. EDL933]
gi|26110190|gb|AAN82376.1|AE016767_136 Ribosomal RNA large subunit methyltransferase J [Escherichia coli
CFT073]
gi|146027|gb|AAA23812.1| ftsJ [Escherichia coli str. K-12 substr. W3110]
gi|606117|gb|AAA57980.1| ftsJ [Escherichia coli str. K-12 substr. MG1655]
gi|746400|gb|AAA97507.1| regulatory protein [Escherichia coli]
gi|1789569|gb|AAC76211.1| 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent
[Escherichia coli str. K-12 substr. MG1655]
gi|13363531|dbj|BAB37481.1| cell division protein methyltransferase FtsJ [Escherichia coli
O157:H7 str. Sakai]
gi|24053650|gb|AAN44685.1| cell division protein [Shigella flexneri 2a str. 301]
gi|30042776|gb|AAP18499.1| cell division protein [Shigella flexneri 2a str. 2457T]
gi|73857193|gb|AAZ89900.1| cell division protein [Shigella sonnei Ss046]
gi|81246994|gb|ABB67702.1| cell division protein [Shigella boydii Sb227]
gi|85675973|dbj|BAE77223.1| 23S rRNA methyltransferase [Escherichia coli str. K12 substr.
W3110]
gi|91074174|gb|ABE09055.1| cell division protein [Escherichia coli UTI89]
gi|110345011|gb|ABG71248.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
536]
gi|110616593|gb|ABF05260.1| cell division protein [Shigella flexneri 5 str. 8401]
gi|115514597|gb|ABJ02672.1| cell division protein [Escherichia coli APEC O1]
gi|157068342|gb|ABV07597.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
HS]
gi|157080222|gb|ABV19930.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
E24377A]
gi|157085953|gb|ABV15631.1| hypothetical protein CKO_04580 [Citrobacter koseri ATCC BAA-895]
gi|169753499|gb|ACA76198.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
ATCC 8739]
gi|169890549|gb|ACB04256.1| 23S rRNA methyltransferase [Escherichia coli str. K-12 substr.
DH10B]
gi|170519041|gb|ACB17219.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
SMS-3-5]
gi|187427334|gb|ACD06608.1| ribosomal RNA large subunit methyltransferase J [Shigella boydii
CDC 3083-94]
gi|188489452|gb|EDU64555.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
53638]
gi|189001103|gb|EDU70089.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4076]
gi|189358551|gb|EDU76970.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4401]
gi|189364840|gb|EDU83256.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4501]
gi|189373884|gb|EDU92300.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC869]
gi|190901915|gb|EDV61664.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
B7A]
gi|190907511|gb|EDV67107.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
F11]
gi|194411731|gb|EDX28055.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
B171]
gi|208727671|gb|EDZ77272.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4206]
gi|208733766|gb|EDZ82453.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4045]
gi|208740393|gb|EDZ88075.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4042]
gi|209157373|gb|ACI34806.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. EC4115]
gi|209758248|gb|ACI77436.1| cell division protein methyltransferase FtsJ [Escherichia coli]
gi|209758250|gb|ACI77437.1| cell division protein methyltransferase FtsJ [Escherichia coli]
gi|209758252|gb|ACI77438.1| cell division protein methyltransferase FtsJ [Escherichia coli]
gi|209758254|gb|ACI77439.1| cell division protein methyltransferase FtsJ [Escherichia coli]
gi|209758256|gb|ACI77440.1| cell division protein methyltransferase FtsJ [Escherichia coli]
gi|209913913|dbj|BAG78987.1| 23S rRNA methyltransferase [Escherichia coli SE11]
gi|215266567|emb|CAS11006.1| 23S rRNA methyltransferase [Escherichia coli O127:H6 str. E2348/69]
gi|217320068|gb|EEC28493.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
O157:H7 str. TW14588]
gi|218353616|emb|CAU99813.1| 23S rRNA methyltransferase [Escherichia coli 55989]
gi|218358003|emb|CAQ90649.1| 23S rRNA methyltransferase [Escherichia fergusonii ATCC 35469]
gi|218362517|emb|CAR00141.1| 23S rRNA methyltransferase [Escherichia coli IAI1]
gi|218367018|emb|CAR04789.1| 23S rRNA methyltransferase [Escherichia coli S88]
gi|218371934|emb|CAR19790.1| 23S rRNA methyltransferase [Escherichia coli IAI39]
gi|218429033|emb|CAV17954.1| 23S rRNA methyltransferase [Escherichia coli ED1a]
gi|218433896|emb|CAR14813.1| 23S rRNA methyltransferase [Escherichia coli UMN026]
gi|222034896|emb|CAP77639.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
LF82]
gi|226839968|gb|EEH71989.1| ribosomal RNA large subunit methyltransferase J [Escherichia sp.
1_1_43]
gi|226899109|gb|EEH85368.1| ribosomal RNA large subunit methyltransferase J [Escherichia sp.
3_2_53FAA]
gi|227835296|gb|EEJ45762.1| 23S rRNA methyltransferase J [Escherichia coli 83972]
gi|238859756|gb|ACR61754.1| 23S rRNA methyltransferase [Escherichia coli BW2952]
gi|242378722|emb|CAQ33512.1| 23S rRNA 2'-O-ribose U2552 methyltransferase [Escherichia coli
BL21(DE3)]
gi|253323031|gb|ACT27633.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975022|gb|ACT40693.1| 23S rRNA methyltransferase [Escherichia coli B str. REL606]
gi|253979178|gb|ACT44848.1| 23S rRNA methyltransferase [Escherichia coli BL21(DE3)]
gi|254594528|gb|ACT73889.1| 23S rRNA methyltransferase [Escherichia coli O157:H7 str. TW14359]
gi|257755955|dbj|BAI27457.1| 23S rRNA methyltransferase [Escherichia coli O26:H11 str. 11368]
gi|257761139|dbj|BAI32636.1| 23S rRNA methyltransferase [Escherichia coli O103:H2 str. 12009]
gi|260447794|gb|ACX38216.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
DH1]
gi|281180221|dbj|BAI56551.1| 23S rRNA methyltransferase [Escherichia coli SE15]
gi|281602562|gb|ADA75546.1| Ribosomal RNA large subunit methyltransferase J [Shigella flexneri
2002017]
gi|284923202|emb|CBG36296.1| cell division protein [Escherichia coli 042]
gi|290764426|gb|ADD58387.1| Ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) [Escherichia coli
O55:H7 str. CB9615]
gi|291322603|gb|EFE62032.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
B088]
gi|291426794|gb|EFE99826.1| rrmJ [Escherichia coli FVEC1412]
gi|291431965|gb|EFF04948.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
B185]
gi|294490488|gb|ADE89244.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
IHE3034]
gi|298277669|gb|EFI19185.1| rrmJ [Escherichia coli FVEC1302]
gi|299879902|gb|EFI88113.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 196-1]
gi|300300162|gb|EFJ56547.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 185-1]
gi|300307862|gb|EFJ62382.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 200-1]
gi|300317360|gb|EFJ67144.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 175-1]
gi|300358336|gb|EFJ74206.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 198-1]
gi|300397749|gb|EFJ81287.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 69-1]
gi|300403689|gb|EFJ87227.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 84-1]
gi|300407046|gb|EFJ90584.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 45-1]
gi|300413933|gb|EFJ97243.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 115-1]
gi|300417869|gb|EFK01180.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 182-1]
gi|300451686|gb|EFK15306.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 116-1]
gi|300456912|gb|EFK20405.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 21-1]
gi|300462204|gb|EFK25697.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 187-1]
gi|300523625|gb|EFK44694.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 119-7]
gi|300529866|gb|EFK50928.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 107-1]
gi|300842744|gb|EFK70504.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 124-1]
gi|300846907|gb|EFK74667.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 78-1]
gi|301076796|gb|EFK91602.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 146-1]
gi|305850044|gb|EFM50503.1| 23S rRNA methyltransferase J [Escherichia coli NC101]
gi|306907027|gb|EFN37535.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
W]
gi|307625222|gb|ADN69526.1| 23S rRNA methyltransferase J [Escherichia coli UM146]
gi|308122713|gb|EFO59975.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 145-7]
gi|309703605|emb|CBJ02945.1| cell division protein [Escherichia coli ETEC H10407]
gi|310334924|gb|EFQ01129.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
1827-70]
gi|312286701|gb|EFR14612.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
2362-75]
gi|312947736|gb|ADR28563.1| 23S rRNA methyltransferase J [Escherichia coli O83:H1 str. NRG
857C]
gi|313648578|gb|EFS13020.1| ribosomal RNA large subunit methyltransferase J [Shigella flexneri
2a str. 2457T]
gi|315062485|gb|ADT76812.1| 23S rRNA methyltransferase [Escherichia coli W]
gi|315137765|dbj|BAJ44924.1| ribosomal RNA large subunit methyltransferase [Escherichia coli
DH1]
gi|315257104|gb|EFU37072.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 85-1]
gi|315288957|gb|EFU48355.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 110-3]
gi|315294886|gb|EFU54225.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 153-1]
gi|315297891|gb|EFU57161.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 16-3]
gi|315617262|gb|EFU97871.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
3431]
gi|320174543|gb|EFW49679.1| 23S rRNA methyltransferase J [Shigella dysenteriae CDC 74-1112]
gi|320181454|gb|EFW56372.1| 23S rRNA methyltransferase J [Shigella boydii ATCC 9905]
gi|320186666|gb|EFW61390.1| 23S rRNA methyltransferase J [Shigella flexneri CDC 796-83]
gi|320189532|gb|EFW64191.1| 23S rRNA methyltransferase J [Escherichia coli O157:H7 str. EC1212]
gi|320194664|gb|EFW69294.1| 23S rRNA methyltransferase J [Escherichia coli WV_060327]
gi|320202093|gb|EFW76668.1| 23S rRNA methyltransferase J [Escherichia coli EC4100B]
gi|320640250|gb|EFX09822.1| 23S rRNA methyltransferase J [Escherichia coli O157:H7 str. G5101]
gi|320645547|gb|EFX14556.1| 23S rRNA methyltransferase J [Escherichia coli O157:H- str. 493-89]
gi|320650857|gb|EFX19314.1| 23S rRNA methyltransferase J [Escherichia coli O157:H- str. H 2687]
gi|320656238|gb|EFX24150.1| 23S rRNA methyltransferase J [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320661928|gb|EFX29336.1| 23S rRNA methyltransferase J [Escherichia coli O55:H7 str. USDA
5905]
gi|320666763|gb|EFX33742.1| 23S rRNA methyltransferase J [Escherichia coli O157:H7 str. LSU-61]
gi|323154393|gb|EFZ40594.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
EPECa14]
gi|323162871|gb|EFZ48706.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
E128010]
gi|323165139|gb|EFZ50929.1| ribosomal RNA large subunit methyltransferase J [Shigella sonnei
53G]
gi|323173561|gb|EFZ59190.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
LT-68]
gi|323183133|gb|EFZ68531.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
1357]
gi|323189200|gb|EFZ74484.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
RN587/1]
gi|323376927|gb|ADX49195.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
KO11]
gi|323936127|gb|EGB32421.1| ribosomal RNA large methyltransferase J [Escherichia coli E1520]
gi|323941721|gb|EGB37900.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
E482]
gi|323946967|gb|EGB42983.1| ribosomal RNA large methyltransferase J [Escherichia coli H120]
gi|323951302|gb|EGB47177.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
H252]
gi|323957674|gb|EGB53388.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
H263]
gi|323961166|gb|EGB56780.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
H489]
gi|323966359|gb|EGB61793.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
M863]
gi|323970258|gb|EGB65529.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
TA007]
gi|323979104|gb|EGB74182.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
TW10509]
gi|324008750|gb|EGB77969.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 57-2]
gi|324012132|gb|EGB81351.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 60-1]
gi|324018296|gb|EGB87515.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
MS 117-3]
gi|324119544|gb|EGC13426.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
E1167]
gi|326337879|gb|EGD61713.1| 23S rRNA methyltransferase J [Escherichia coli O157:H7 str. 1125]
gi|326347449|gb|EGD71174.1| 23S rRNA methyltransferase J [Escherichia coli O157:H7 str. 1044]
gi|327251270|gb|EGE62959.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
STEC_7v]
gi|330909233|gb|EGH37747.1| cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase E [Escherichia coli AA86]
gi|331037348|gb|EGI09572.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
H736]
gi|331042726|gb|EGI14868.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
M605]
gi|331048165|gb|EGI20242.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
M718]
gi|331054048|gb|EGI26077.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
TA206]
gi|331058039|gb|EGI30021.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
TA143]
gi|331062919|gb|EGI34833.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
TA271]
gi|331073323|gb|EGI44646.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
H591]
gi|331078441|gb|EGI49647.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
H299]
gi|332086091|gb|EGI91253.1| ribosomal RNA large subunit methyltransferase J [Shigella boydii
5216-82]
gi|332086420|gb|EGI91567.1| ribosomal RNA large subunit methyltransferase J [Shigella
dysenteriae 155-74]
gi|332090681|gb|EGI95775.1| ribosomal RNA large subunit methyltransferase J [Shigella boydii
3594-74]
gi|332102342|gb|EGJ05688.1| 23S rRNA methyltransferase [Shigella sp. D9]
gi|332345135|gb|AEE58469.1| ribosomal RNA large subunit methyltransferase RrmJ [Escherichia
coli UMNK88]
gi|332752338|gb|EGJ82728.1| ribosomal RNA large subunit methyltransferase J [Shigella flexneri
4343-70]
gi|332752864|gb|EGJ83249.1| ribosomal RNA large subunit methyltransferase J [Shigella flexneri
K-671]
gi|332754691|gb|EGJ85057.1| ribosomal RNA large subunit methyltransferase J [Shigella flexneri
2747-71]
gi|332765175|gb|EGJ95402.1| ribosomal RNA large subunit methyltransferase J [Shigella flexneri
2930-71]
gi|332998821|gb|EGK18417.1| ribosomal RNA large subunit methyltransferase J [Shigella flexneri
VA-6]
gi|332999257|gb|EGK18843.1| ribosomal RNA large subunit methyltransferase J [Shigella flexneri
K-272]
gi|332999886|gb|EGK19469.1| ribosomal RNA large subunit methyltransferase J [Shigella flexneri
K-218]
gi|333014527|gb|EGK33874.1| ribosomal RNA large subunit methyltransferase J [Shigella flexneri
K-304]
gi|333014980|gb|EGK34324.1| ribosomal RNA large subunit methyltransferase J [Shigella flexneri
K-227]
Length = 209
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|332535916|ref|ZP_08411626.1| ribosomal RNA large subunit methyltransferase J [Pseudoalteromonas
haloplanktis ANT/505]
gi|332034703|gb|EGI71252.1| ribosomal RNA large subunit methyltransferase J [Pseudoalteromonas
haloplanktis ANT/505]
Length = 209
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS+ WL H +D YVQ AQ +GWR+R+ +KL ++ + ++L+ +VDLG+
Sbjct: 1 MTNKKQSASSQRWLKEHFDDKYVQEAQKKGWRSRAVFKLDEVQNRDKLLRPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PGSWSQ A G +V+A DIL M+ + GV F + DF + + + I G
Sbjct: 61 APGSWSQYLAEKVGDK---GQVIACDILPMDSLAGVDFLQGDFREEAVLNALLKRIDGKN 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VLSDMA G+ +D +M L E A ++L G F+VK FQG + L
Sbjct: 118 VDVVLSDMAPNMSGNNSVDQAGSMYLVELALDMCSQVLKKNGAFIVKVFQGEGFDQYLQD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP ASRA S E++++A G++
Sbjct: 178 VRNSFKAVKIRKPDASRARSREVYIVATGYK 208
>gi|290473440|ref|YP_003466307.1| 23 S rRNA methyltransferase [Xenorhabdus bovienii SS-2004]
gi|289172740|emb|CBJ79511.1| 23 S rRNA methyltransferase [Xenorhabdus bovienii SS-2004]
Length = 209
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL I + +I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDGIQQSDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
SPG WSQ G + RV+A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 SPGGWSQYVVNQIG---DRGRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDNK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLIELALGMCRDVLAPGGSFIVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPEASRARSREVYIVATGRK 208
>gi|226946314|ref|YP_002801387.1| ribosomal RNA large subunit methyltransferase J/FtsJ [Azotobacter
vinelandii DJ]
gi|259494558|sp|C1DFL6|RLME_AZOVD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226721241|gb|ACO80412.1| ribosomal RNA large subunit methyltransferase J/FtsJ [Azotobacter
vinelandii DJ]
Length = 207
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S WL H +DPYV+ AQ +G+R+R++YKLL+I EK +IL+ +VDLG++PG W
Sbjct: 3 RSKTSHRWLKEHFDDPYVKMAQKDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G + R++A DIL M+ I V F + DF D + + +AIG P DLV+
Sbjct: 63 SQVTSRLIG---DRGRLIASDILPMDSIPDVTFIQGDFTDDAVFALLLEAIGEQPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G + D R M LCE A A +L GGDFL+K FQG + L +++ F
Sbjct: 120 SDMAPNMSGVKAADQPRAMYLCELALDLAGRVLRPGGDFLIKIFQGEGFDQYLRQVREGF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP++SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPLSSRDRSREQYLLARGFR 205
>gi|157376529|ref|YP_001475129.1| 23S rRNA methyltransferase J [Shewanella sediminis HAW-EB3]
gi|189040340|sp|A8FYS8|RLME_SHESH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|157318903|gb|ABV38001.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella sediminis
HAW-EB3]
Length = 209
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 122/208 (58%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ AQ G+R+R+A+K+ +I EK ++++ +VDLG++PG
Sbjct: 4 KKRTASSSRWMQEHFDDHYVKLAQKRGFRSRAAFKIEEIQEKDKLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDL 138
WSQVA ++ G N +V+A DIL M+PI+GV F + DF + + + +G D+
Sbjct: 64 GWSQVAVKLAGDN---GKVIACDILPMDPIVGVDFLQGDFREEKVLDALLTRVGDAKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG + + +++
Sbjct: 121 VLSDMAPNMSGTGGVDQPRAMYLVELALDMCHQVLAPNGCFAVKVFQGEGFEEYMKSVRE 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SRA S E++L+A G++
Sbjct: 181 AFKTVKTRKPDSSRARSREVYLVATGYK 208
>gi|90412478|ref|ZP_01220481.1| 23S rRNA methylase [Photobacterium profundum 3TCK]
gi|90326515|gb|EAS42921.1| 23S rRNA methylase [Photobacterium profundum 3TCK]
Length = 209
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 112/207 (54%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS WL H +D YVQ AQ G+R+R+ +K+ +I K ++L+ +VDLG++PG
Sbjct: 5 KQSASSGRWLKEHFDDKYVQEAQKRGYRSRAIFKIEEIQNKDKLLKPGMTVVDLGAAPGG 64
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLV 139
WSQ AA + G + +V+A DIL M+ + GV F + DF + + + D+V
Sbjct: 65 WSQYAAEVVG---DEGQVIACDILSMDSLPGVSFLQGDFREEAVLSALLERIQPNMVDVV 121
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G+ D R M L E A ++L G F VK FQG + L ++
Sbjct: 122 LSDMAPNMSGNLASDQPRAMYLVELALDMCRQVLAPNGSFAVKVFQGEGFDQYLAEIRNM 181
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SR S E++++A G++
Sbjct: 182 FKVVKIRKPDSSRDRSREVYIVATGYK 208
>gi|161506140|ref|YP_001573252.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189040330|sp|A9MP28|RLME_SALAR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|160867487|gb|ABX24110.1| hypothetical protein SARI_04328 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 208
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIG---GRGRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|56415226|ref|YP_152301.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364156|ref|YP_002143793.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|81361508|sp|Q5PLC1|RLME_SALPA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705312|sp|B5BGK3|RLME_SALPK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56129483|gb|AAV78989.1| cell division protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197095633|emb|CAR61201.1| cell division protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 208
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDSSRARSREVYIVATGRK 208
>gi|229505742|ref|ZP_04395252.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae BX 330286]
gi|229509225|ref|ZP_04398710.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae B33]
gi|229512898|ref|ZP_04402365.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae TMA 21]
gi|229519566|ref|ZP_04409009.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae RC9]
gi|229525289|ref|ZP_04414694.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae bv. albensis VL426]
gi|229530441|ref|ZP_04419829.1| cell division protein ftsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae 12129(1)]
gi|229608853|ref|YP_002879501.1| 23S rRNA methyltransferase J [Vibrio cholerae MJ-1236]
gi|229332214|gb|EEN97702.1| cell division protein ftsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae 12129(1)]
gi|229338870|gb|EEO03887.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae bv. albensis VL426]
gi|229344255|gb|EEO09230.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae RC9]
gi|229350147|gb|EEO15100.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae TMA 21]
gi|229353797|gb|EEO18733.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae B33]
gi|229357965|gb|EEO22882.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae BX 330286]
gi|229371508|gb|ACQ61931.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae MJ-1236]
Length = 239
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 4/212 (1%)
Query: 16 KVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLG 75
K+ + SS WL H +D YV A+ +G+R+R+ +K+ +I K ++L++ +VDLG
Sbjct: 30 KMSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLG 89
Query: 76 SSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGG 134
++PG WSQ AA++ G RV+A D+L ME I GV F + DF + + +
Sbjct: 90 AAPGGWSQFAAKVVGEG---GRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPD 146
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG +D +
Sbjct: 147 MVDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVK 206
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR+ S E+F++A G++
Sbjct: 207 AVRDLFKVVKIRKPDSSRSRSREVFIVATGYK 238
>gi|16762059|ref|NP_457676.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143548|ref|NP_806890.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213027549|ref|ZP_03341996.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213420316|ref|ZP_03353382.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213425425|ref|ZP_03358175.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213584091|ref|ZP_03365917.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213646996|ref|ZP_03377049.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213852787|ref|ZP_03382319.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289804406|ref|ZP_06535035.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|289825808|ref|ZP_06544976.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|81512806|sp|Q8Z3H3|RLME_SALTI RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|25311089|pir||AH0902 cell division protein [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16504362|emb|CAD07814.1| cell division protein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29139183|gb|AAO70750.1| cell division protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 208
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|312170896|emb|CBX79155.1| cell division protein [Erwinia amylovora ATCC BAA-2158]
Length = 209
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQGDKLFKHGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ GS RV+A DIL M+PI+GV F + DF D + + + +G
Sbjct: 61 APGGWSQYVVTQIGSK---GRVIACDILPMDPIVGVDFLQGDFRDELVLKALLERVGDTK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M LCE A ++L GG FLVK FQG + L
Sbjct: 118 VQVVMSDMAPNMTGTPAVDIPRSMYLCELALEMCRDVLAPGGSFLVKVFQGDGFEEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 208
>gi|293412551|ref|ZP_06655274.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
B354]
gi|291469322|gb|EFF11813.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
B354]
Length = 209
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKTLLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|16766593|ref|NP_462208.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161616304|ref|YP_001590269.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167552057|ref|ZP_02345810.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|167995303|ref|ZP_02576393.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168231905|ref|ZP_02656963.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168237996|ref|ZP_02663054.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168243130|ref|ZP_02668062.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168262693|ref|ZP_02684666.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168463481|ref|ZP_02697398.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|168819637|ref|ZP_02831637.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|194443123|ref|YP_002042553.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194450102|ref|YP_002047325.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194471555|ref|ZP_03077539.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194736185|ref|YP_002116245.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197247415|ref|YP_002148221.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197265976|ref|ZP_03166050.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|198244059|ref|YP_002217269.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200387675|ref|ZP_03214287.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205354198|ref|YP_002227999.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858545|ref|YP_002245196.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|81521544|sp|Q8ZLS7|RLME_SALTY RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040331|sp|A9N744|RLME_SALPB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705306|sp|B5F6U7|RLME_SALA4 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705307|sp|B5FI23|RLME_SALDC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705308|sp|B5R0H0|RLME_SALEP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705309|sp|B5REP5|RLME_SALG2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705310|sp|B4TJ16|RLME_SALHS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705311|sp|B4T708|RLME_SALNS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705313|sp|B4TWE7|RLME_SALSV RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|16421855|gb|AAL22167.1| 23S rRNA methyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161365668|gb|ABX69436.1| hypothetical protein SPAB_04112 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401786|gb|ACF62008.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194408406|gb|ACF68625.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194457919|gb|EDX46758.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194711687|gb|ACF90908.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195633188|gb|EDX51602.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197211118|gb|ACH48515.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|197244231|gb|EDY26851.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197289104|gb|EDY28473.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|197938575|gb|ACH75908.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199604773|gb|EDZ03318.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205273979|emb|CAR38985.1| cell division protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205323210|gb|EDZ11049.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205327001|gb|EDZ13765.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205333841|gb|EDZ20605.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205337840|gb|EDZ24604.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|205343455|gb|EDZ30219.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205348567|gb|EDZ35198.1| ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|206710348|emb|CAR34706.1| cell division protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|261248462|emb|CBG26299.1| cell division protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267995494|gb|ACY90379.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301159846|emb|CBW19365.1| cell division protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312914321|dbj|BAJ38295.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320087741|emb|CBY97505.1| cell division protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|321225980|gb|EFX51034.1| Cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase E ; LSU rRNA Um [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|322615300|gb|EFY12221.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618341|gb|EFY15232.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622854|gb|EFY19698.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626824|gb|EFY23621.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631393|gb|EFY28153.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322635340|gb|EFY32054.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322643339|gb|EFY39903.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322647089|gb|EFY43590.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322648892|gb|EFY45337.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322655084|gb|EFY51395.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322657687|gb|EFY53955.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664183|gb|EFY60381.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322667466|gb|EFY63628.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674714|gb|EFY70806.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675653|gb|EFY71726.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682289|gb|EFY78312.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322684892|gb|EFY80890.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323131656|gb|ADX19086.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323195903|gb|EFZ81074.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199020|gb|EFZ84117.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323204280|gb|EFZ89289.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207627|gb|EFZ92574.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211320|gb|EFZ96164.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323214738|gb|EFZ99487.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221218|gb|EGA05644.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323224041|gb|EGA08334.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230310|gb|EGA14429.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233286|gb|EGA17380.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323239323|gb|EGA23373.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323242426|gb|EGA26452.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246936|gb|EGA30902.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323254131|gb|EGA37951.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323255248|gb|EGA39025.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323262711|gb|EGA46267.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264021|gb|EGA47529.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269407|gb|EGA52862.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326625047|gb|EGE31392.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326629319|gb|EGE35662.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332990154|gb|AEF09137.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 208
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|127513763|ref|YP_001094960.1| 23S rRNA methyltransferase J [Shewanella loihica PV-4]
gi|158513475|sp|A3QGV3|RLME_SHELP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|126639058|gb|ABO24701.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella loihica PV-4]
Length = 209
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 73/208 (35%), Positives = 119/208 (57%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ +Q G R+R+A+K+ +I +K ++++ +VDLG++PG
Sbjct: 4 KKRTASSTRWMQEHFDDHYVKLSQKRGLRSRAAFKIEEIQQKDKLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDL 138
WSQ+A ++ G +V+A DIL M+PI+GV F + DF + + + +G D+
Sbjct: 64 GWSQIAVKLAGET---GKVIACDILPMDPIVGVDFLQGDFREEKVLNALLERVGDAKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG ++ + +++
Sbjct: 121 VLSDMAPNMSGTGGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVRE 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP +SR S E++L+A G++
Sbjct: 181 AFTTVKTRKPDSSRPRSREVYLVATGYK 208
>gi|283788183|ref|YP_003368048.1| cell division protein [Citrobacter rodentium ICC168]
gi|282951637|emb|CBG91337.1| cell division protein [Citrobacter rodentium ICC168]
Length = 209
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|258623149|ref|ZP_05718160.1| cell division protein FtsJ [Vibrio mimicus VM573]
gi|258625327|ref|ZP_05720227.1| cell division protein FtsJ [Vibrio mimicus VM603]
gi|258582393|gb|EEW07242.1| cell division protein FtsJ [Vibrio mimicus VM603]
gi|258584569|gb|EEW09307.1| cell division protein FtsJ [Vibrio mimicus VM573]
Length = 264
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 118/212 (55%), Gaps = 4/212 (1%)
Query: 16 KVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLG 75
K+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG
Sbjct: 55 KMSKQKHSASSTRWLKEHFDDKYANEARKKGFRSRAIFKIEEIQNKDKLLKPGMTVVDLG 114
Query: 76 SSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN 135
++PG WSQ AA++ G RV+A D+L ME I GV F + DF + + I
Sbjct: 115 AAPGGWSQFAAKVVGEG---GRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPE 171
Query: 136 P-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG +D +
Sbjct: 172 MVDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVK 231
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR+ S E+F++A G++
Sbjct: 232 AVRDLFKVVKIRKPDSSRSRSREVFIVATGYK 263
>gi|145298036|ref|YP_001140877.1| 23S ribosomal RNA methyltransferase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|158514048|sp|A4SJQ7|RLME_AERS4 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|142850808|gb|ABO89129.1| 23S ribosomal RNA methyltransferase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 209
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV++AQ G R+R+ +K+ +I K ++L++ +VDLG+
Sbjct: 1 MTQKKRSPSSTRWLKEHFDDQYVKKAQKLGLRSRAVFKIDEIQGKDKLLRTGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGN 135
+PG WSQ A G N RV+A DIL M+PI GV F + DF + + +
Sbjct: 61 APGGWSQFAVEQVGDN---GRVIACDILPMDPIAGVDFLQGDFREETVLGALLDRVGPDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +++D R M L E A ++L G F+VK FQG + L
Sbjct: 118 VDVVMSDMAPNMSGTQQVDQARAMYLIELALDMCNQVLRTNGSFVVKVFQGEGFDAYLNE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++K F V KP +SRA S E++++A GF+
Sbjct: 178 IRKLFSAVKIRKPDSSRARSREVYIVATGFK 208
>gi|258542575|ref|YP_003188008.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01]
gi|256633653|dbj|BAH99628.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01]
gi|256636712|dbj|BAI02681.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-03]
gi|256639765|dbj|BAI05727.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-07]
gi|256642821|dbj|BAI08776.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-22]
gi|256645876|dbj|BAI11824.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-26]
gi|256648929|dbj|BAI14870.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-32]
gi|256651916|dbj|BAI17850.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654973|dbj|BAI20900.1| ribosomal RNA large subunit 23S methyltransferase RrmJ/FtsJ
[Acetobacter pasteurianus IFO 3283-12]
Length = 263
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 85/222 (38%), Positives = 136/222 (61%), Gaps = 6/222 (2%)
Query: 6 GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQI 64
R + ++ R + + WL+R +NDPYVQ A +GWR+R+A+KL++++++ +
Sbjct: 38 APQKMRAQSVSLRTARGRTTAQQRWLSRQLNDPYVQAAHKQGWRSRAAFKLIELDDRFHL 97
Query: 65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
++ RIVDLG++PG W+QV + ++VV +D+L +EP+ G + + DF D +
Sbjct: 98 IRPGMRIVDLGAAPGGWTQVLVKR-----GASQVVGVDLLPVEPVAGAEIIEGDFTDPEM 152
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
+ +GG DLV+SDMA T GH DH+R + L E A FA ++L GG F+ K F
Sbjct: 153 DARLISMLGGKADLVVSDMAPNTTGHAPTDHVRIIGLAEEALHFAFDILAEGGGFVAKVF 212
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
QGG+ +L +K+ F +V H KP ASR +S E++++A GFR
Sbjct: 213 QGGSEKAMLNTMKQAFTQVRHAKPPASRKDSSELYVVATGFR 254
>gi|59711085|ref|YP_203861.1| 23S rRNA methyltransferase J [Vibrio fischeri ES114]
gi|75354549|sp|Q5E7M3|RLME_VIBF1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|59479186|gb|AAW84973.1| 23S rRNA methyltransferase [Vibrio fischeri ES114]
Length = 209
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ SS WL H +D YV AQ G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKNKVSASSGRWLKEHFDDKYVLEAQKRGYRSRAIFKIEEIQNKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ A G + +V+A DIL M+ I GV F + DF + + + +
Sbjct: 61 APGGWSQYAVEQVG---DEGQVIACDILPMDSIAGVSFLQGDFREEAVLDALLERIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F VK FQG + L
Sbjct: 118 VDVVMSDMAPNMSGNLAVDQPRAMYLVELALDMCRQVLAPNGSFTVKVFQGEGFDQYLQE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E++++A G++
Sbjct: 178 VRNMFKVVKIRKPDSSRARSREVYIVATGYK 208
>gi|242240756|ref|YP_002988937.1| 23S rRNA methyltransferase J [Dickeya dadantii Ech703]
gi|242132813|gb|ACS87115.1| ribosomal RNA large subunit methyltransferase J [Dickeya dadantii
Ech703]
Length = 209
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YVQ+AQ +G R+R+ +KL ++ + ++ + +VDLG+
Sbjct: 1 MANKKRSASSTRWLQEHFSDKYVQQAQKKGLRSRAWFKLDELQQSDKLFKLGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ G N R++A D+L M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGGN---GRIIACDLLPMDPIVGVDFLQGDFRDELVLKTLLERVGDEK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALGMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASRA S E++++A G +
Sbjct: 178 IRTLFTTVKIRKPEASRARSREVYIVATGRK 208
>gi|317493619|ref|ZP_07952040.1| ribosomal RNA large subunit methyltransferase J [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316918562|gb|EFV39900.1| ribosomal RNA large subunit methyltransferase J [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 208
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W++ H +D YV +AQ +G R+R+ +KL +I ++ + +VDLG++PG
Sbjct: 3 KKRSASSNRWMHEHFSDKYVIQAQKKGLRSRAWFKLDEIQSTDKLFKPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDL 138
WSQ G++ RV+A DIL M+PI+GV F + DF D + + +
Sbjct: 63 GWSQYVVTQIGNS---GRVIACDILPMDPIVGVDFLQGDFRDELVLKALTDRVGEDKVQV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R+M L E A A ++L GG FLVK FQG ++ L ++
Sbjct: 120 VMSDMAPNMSGTPSVDIPRSMYLVELALEMAKDVLAPGGSFLVKVFQGEGFDEYLTQIRS 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV KP ASRA S E++++A G +
Sbjct: 180 LFTKVKIRKPDASRARSREVYIVATGRK 207
>gi|51594825|ref|YP_069016.1| 23S rRNA methyltransferase J [Yersinia pseudotuberculosis IP 32953]
gi|108806051|ref|YP_649967.1| 23S rRNA methyltransferase J [Yersinia pestis Antiqua]
gi|108813407|ref|YP_649174.1| 23S rRNA methyltransferase J [Yersinia pestis Nepal516]
gi|145600799|ref|YP_001164875.1| 23S rRNA methyltransferase J [Yersinia pestis Pestoides F]
gi|153950455|ref|YP_001402557.1| 23S rRNA methyltransferase J [Yersinia pseudotuberculosis IP 31758]
gi|153997280|ref|ZP_02022380.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
CA88-4125]
gi|161484877|ref|NP_668018.2| 23S rRNA methyltransferase J [Yersinia pestis KIM 10]
gi|161511441|ref|NP_991973.2| 23S rRNA methyltransferase J [Yersinia pestis biovar Microtus str.
91001]
gi|170025952|ref|YP_001722457.1| 23S rRNA methyltransferase J [Yersinia pseudotuberculosis YPIII]
gi|186893834|ref|YP_001870946.1| 23S rRNA methyltransferase J [Yersinia pseudotuberculosis PB1/+]
gi|218930517|ref|YP_002348392.1| 23S rRNA methyltransferase J [Yersinia pestis CO92]
gi|229839155|ref|ZP_04459314.1| 23S rRNA methyltransferase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896644|ref|ZP_04511811.1| 23S rRNA methyltransferase [Yersinia pestis Pestoides A]
gi|229899719|ref|ZP_04514860.1| 23S rRNA methyltransferase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229903881|ref|ZP_04518994.1| 23S rRNA methyltransferase [Yersinia pestis Nepal516]
gi|81516686|sp|Q8ZBB5|RLME_YERPE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|81640539|sp|Q66F67|RLME_YERPS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|123073165|sp|Q1CEK6|RLME_YERPN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|123372780|sp|Q1CC00|RLME_YERPA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|158514111|sp|A4TRJ0|RLME_YERPP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040346|sp|A7FMS9|RLME_YERP3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705326|sp|B2K2P8|RLME_YERPB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705327|sp|B1JMH7|RLME_YERPY RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|51588107|emb|CAH19713.1| ribosomal RNA large subunit methyltransferase J [Yersinia
pseudotuberculosis IP 32953]
gi|108777055|gb|ABG19574.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
Nepal516]
gi|108777964|gb|ABG12022.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
Antiqua]
gi|115349128|emb|CAL22091.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
CO92]
gi|145212495|gb|ABP41902.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
Pestoides F]
gi|149288917|gb|EDM38997.1| ribosomal RNA large subunit methyltransferase J [Yersinia pestis
CA88-4125]
gi|152961950|gb|ABS49411.1| ribosomal RNA large subunit methyltransferase J [Yersinia
pseudotuberculosis IP 31758]
gi|169752486|gb|ACA70004.1| ribosomal RNA large subunit methyltransferase J [Yersinia
pseudotuberculosis YPIII]
gi|186696860|gb|ACC87489.1| ribosomal RNA large subunit methyltransferase J [Yersinia
pseudotuberculosis PB1/+]
gi|229679651|gb|EEO75754.1| 23S rRNA methyltransferase [Yersinia pestis Nepal516]
gi|229687211|gb|EEO79286.1| 23S rRNA methyltransferase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695521|gb|EEO85568.1| 23S rRNA methyltransferase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700422|gb|EEO88454.1| 23S rRNA methyltransferase [Yersinia pestis Pestoides A]
gi|320013706|gb|ADV97277.1| 23S rRNA methyltransferase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 209
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MSNKKRSASSSRWLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQSDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A GS RV+A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYAVTQIGSK---GRVIACDLLPMDPIVGVDFLQGDFRDELVLKALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+ DMA G +D ++M L E A ++L GG FLVK FQG ++ L
Sbjct: 118 VQVVMCDMAPNMSGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASRA S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRARSREVYIVATGRK 208
>gi|51473362|ref|YP_067119.1| rRNA (uridine-2'-O-)-methyltransferase (23S ribosomal RNA
methyltransferase) [Rickettsia typhi str. Wilmington]
gi|81390247|sp|Q68XK5|RLME_RICTY RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|51459674|gb|AAU03637.1| rRNA (uridine-2'-O-)-methyltransferase (23S ribosomal RNA
methyltransferase) [Rickettsia typhi str. Wilmington]
Length = 227
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 152/222 (68%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK + SS +WL R +NDPYV +A+LEG+R+R+AYKLL+I++K ++
Sbjct: 6 SGYRNKIVRVKTAKKRPISSSNWLRRQLNDPYVAKARLEGFRSRAAYKLLEIHDKFRLFT 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANN--TRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N +IVDLG++PG WSQVA+++ ++ NN ++++ID+L +EPI+GV+F + DF + D+
Sbjct: 66 PNMKIVDLGAAPGGWSQVASKLIKASDNNLNNKIISIDLLKIEPIVGVEFLQKDFFEKDT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
E I + G DLV+SDMA TIGH+ DH+RT+ LCE A FAL++L F+ K F
Sbjct: 126 EELIIHGLDGKADLVMSDMASNTIGHKATDHIRTLLLCEQAFEFALKVLKPSCHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG +L +K+ F+ V H KPV+SR+ES E++L+A +
Sbjct: 186 RGGAETALLNKVKREFRTVKHFKPVSSRSESTEIYLVALNKK 227
>gi|120597892|ref|YP_962466.1| 23S rRNA methyltransferase J [Shewanella sp. W3-18-1]
gi|146293936|ref|YP_001184360.1| 23S rRNA methyltransferase J [Shewanella putrefaciens CN-32]
gi|143461753|sp|A1RGW7|RLME_SHESW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040339|sp|A4Y9C8|RLME_SHEPC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120557985|gb|ABM23912.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella sp. W3-18-1]
gi|145565626|gb|ABP76561.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella putrefaciens
CN-32]
gi|319427313|gb|ADV55387.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella putrefaciens
200]
Length = 209
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 121/208 (58%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ AQ G R+R+A+KL ++ +K Q+++ +VDLG++PG
Sbjct: 4 KKRTASSNRWMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDL 138
WSQVA ++ G + +V+A DIL M+PI+GV F + DF + E + + D+
Sbjct: 64 GWSQVAVKLVG---DRGKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG ++ + +K+
Sbjct: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKE 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SRA S E++L+A G++
Sbjct: 181 AFKVVKTRKPDSSRARSREVYLVATGYK 208
>gi|329115331|ref|ZP_08244085.1| Ribosomal RNA large subunit methyltransferase E [Acetobacter
pomorum DM001]
gi|326695310|gb|EGE46997.1| Ribosomal RNA large subunit methyltransferase E [Acetobacter
pomorum DM001]
Length = 263
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 85/222 (38%), Positives = 135/222 (60%), Gaps = 6/222 (2%)
Query: 6 GSSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQI 64
R + ++ R + + WL+R +NDPYVQ A +GWR+R+A+KL++++++ +
Sbjct: 38 APQKMRAQSVSLRTARGRTTAQQRWLSRQLNDPYVQAAHKQGWRSRAAFKLIELDDRFHL 97
Query: 65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
++ RIVDLG++PG W+QV + +VV +D+L +EP+ G + + DF D +
Sbjct: 98 IRPGMRIVDLGAAPGGWTQVLVKR-----GAAQVVGVDLLPVEPVTGAEIIEGDFTDPEM 152
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
+ +GG DLV+SDMA T GH DH+R + L E A FA ++L GG F+ K F
Sbjct: 153 DARLISMLGGKADLVVSDMAPNTTGHAPTDHVRIIGLAEEALHFAFDILAEGGGFVAKVF 212
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
QGG+ +L +K+ F +V H KP ASR +S E++++A GFR
Sbjct: 213 QGGSEKAMLNTMKQAFTQVRHAKPPASRKDSSELYVVATGFR 254
>gi|254281755|ref|ZP_04956723.1| ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium NOR51-B]
gi|219677958|gb|EED34307.1| ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium NOR51-B]
Length = 206
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 122/207 (58%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SSR WL H DPYVQRAQ EG+R+R+ YKLL++NE+ ++++ ++DLG++PG
Sbjct: 3 KKKSSSRAWLKEHREDPYVQRAQKEGYRSRACYKLLELNERDRLIRPGMTVLDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLV 139
WSQVAA + G+ RVVA DIL M+ + GV F + DF + + + + P LV
Sbjct: 63 WSQVAANLVGAK---GRVVASDILPMDSLAGVTFLQGDFTEEAIYQKLLAEFELAPPQLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D R M+L E A A+ +L GG F+ K F G +L +
Sbjct: 120 MSDMAPNLSGMTAVDQPRAMALVELALDLAVTLLPPGGAFVAKVFHGEGFEPLLKACRGQ 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F +V+ KP ASR S E++L+A G R
Sbjct: 180 FDRVLTRKPTASRPRSREVYLVATGKR 206
>gi|15604038|ref|NP_220553.1| cell division protein FTSJ (ftsJ) [Rickettsia prowazekii str.
Madrid E]
gi|9910874|sp|Q9ZE00|RLME_RICPR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|3860729|emb|CAA14630.1| CELL DIVISION PROTEIN FTSJ (ftsJ) [Rickettsia prowazekii]
gi|292571757|gb|ADE29672.1| Ribosomal RNA large subunit methyltransferase J [Rickettsia
prowazekii Rp22]
Length = 227
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 152/222 (68%), Gaps = 3/222 (1%)
Query: 8 SSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S R +VK + SS +WL R +NDPYV +A+LEG+R+R+AYKLL+I+ K ++
Sbjct: 6 SGYRNKIVRVKTSKKRPISSSNWLRRQLNDPYVAKARLEGFRSRAAYKLLEIHYKFRLFT 65
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANN--TRVVAIDILDMEPILGVKFFKFDFLDLDS 124
N +IVDLG++PG WSQVA+++ ++ NN ++++ID+L++EPI+GV+F + DF + D+
Sbjct: 66 PNMKIVDLGAAPGGWSQVASKLIKASDNNLNNKIISIDLLEIEPIVGVEFLQKDFFEKDT 125
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
E I + G D+V+SDMA TIGH+ DH+RT+ LCE A FAL++L F+ K F
Sbjct: 126 EELIIHNLEGKADIVMSDMASNTIGHKATDHMRTLLLCEQAFEFALKVLKPSCHFIAKIF 185
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+GG +L +K+ F+ V H KPV+SR+ES E++L+A +
Sbjct: 186 RGGAETALLNKVKREFRTVKHFKPVSSRSESTEIYLVALNKK 227
>gi|94499454|ref|ZP_01305991.1| 23S rRNA methylase [Oceanobacter sp. RED65]
gi|94428208|gb|EAT13181.1| 23S rRNA methylase [Oceanobacter sp. RED65]
Length = 206
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WLN H+ND YV+RAQ +G+R+R++YKLL++ EK ++++ +DLGS+PG W
Sbjct: 3 RSKSSKQWLNEHVNDVYVKRAQNDGYRSRASYKLLELIEKDKLVRPGMVTMDLGSAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVL 140
SQV A I G RV+A DIL M+ + GV F + DF + + ++ I + DLV+
Sbjct: 63 SQVLAPIVGDK---GRVIASDILPMDAMAGVDFIQGDFTEDEVFDEIMAKLDNAPVDLVV 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G D +M L E A A ++L G F+ K FQG + L ++ F
Sbjct: 120 SDMAPNISGVNAADQASSMYLVELALDMARQVLKQNGSFVAKVFQGAGYEEYLKDVRSSF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV+ KP ASR S E++++AKGF+
Sbjct: 180 NKVLIRKPDASRPRSREVYVVAKGFK 205
>gi|331007339|ref|ZP_08330535.1| Ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium IMCC1989]
gi|330418855|gb|EGG93325.1| Ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium IMCC1989]
Length = 206
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 129/206 (62%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL H D YVQ++Q +G+R+R+ YKLL++N+K ++++ N ++DLGS+PG W
Sbjct: 3 RSKSSKGWLEEHFKDKYVQQSQQDGYRSRACYKLLELNKKDKLIKKNMTVIDLGSAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA + G N V+A DIL M+ I GV+F + DF + +E I A+ G DLV+
Sbjct: 63 SQVAAELVGDNGT---VIASDILPMDGIAGVQFVQGDFTEDSVFEEIMNAMQGFKADLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G ++D R M L E A A+ L +GG F+ K FQG + +L +K+F
Sbjct: 120 SDMAPNMSGMAEVDQPRAMYLVELALDMAVNTLEVGGGFVAKVFQGEGFDALLAETRKNF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+V+ KP ASRA S E++ +A GF+
Sbjct: 180 TRVVTRKPDASRARSREVYWVATGFK 205
>gi|113969362|ref|YP_733155.1| 23S rRNA methyltransferase J [Shewanella sp. MR-4]
gi|117919471|ref|YP_868663.1| 23S rRNA methyltransferase J [Shewanella sp. ANA-3]
gi|123325253|sp|Q0HLG9|RLME_SHESM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|143461679|sp|A0KTY8|RLME_SHESA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|113884046|gb|ABI38098.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella sp. MR-4]
gi|117611803|gb|ABK47257.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella sp. ANA-3]
Length = 209
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 79/208 (37%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ AQ G R+R+A+KL ++ EK Q+++ +VDLG++PG
Sbjct: 4 KKRTASSTRWMQEHFDDHYVKLAQKRGLRSRAAFKLEELQEKDQLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDL 138
WSQ+A ++TG +V+A DIL M+PI+GV F + DF + E + + D+
Sbjct: 64 GWSQIAVKLTGDK---GKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG ++ + +K
Sbjct: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKD 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SRA S E++L+A G++
Sbjct: 181 AFKVVKTRKPDSSRARSREVYLVATGYK 208
>gi|220934156|ref|YP_002513055.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thioalkalivibrio sp.
HL-EbGR7]
gi|254809560|sp|B8GNX9|RLME_THISH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|219995466|gb|ACL72068.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thioalkalivibrio sp.
HL-EbGR7]
Length = 207
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 121/206 (58%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL H +D YV+RAQ EG+R+R+ YKL +I E+ ++L+ +VDLG++PG W
Sbjct: 3 RSKSSHRWLKEHFDDEYVKRAQQEGYRSRAVYKLQEIQERDRLLRQGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNPDLVL 140
+Q AA + G + RVVA DIL M+P+ GV + DF + + E + G DLV+
Sbjct: 63 TQYAAGLVG---KHGRVVASDILPMDPLPGVTIVEGDFREAEVLERLLAVLGEGGADLVM 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M L E A A +L GGDFLVK FQG ++ + +L+ +
Sbjct: 120 SDMAPNMSGMDAVDQPRAMYLAELAAELARTVLKPGGDFLVKLFQGAEFDEYVRMLRTEY 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP ASR S E++ +A+G +
Sbjct: 180 DKVSIRKPKASRPRSREVYAVARGRK 205
>gi|77359818|ref|YP_339393.1| 23S rRNA methyltransferase J [Pseudoalteromonas haloplanktis
TAC125]
gi|123587311|sp|Q3IE64|RLME_PSEHT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|76874729|emb|CAI85950.1| ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552
methyltransferase) (Cell division protein ftsJ)
[Pseudoalteromonas haloplanktis TAC125]
Length = 209
Score = 194 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS+ WL H +D YVQ AQ +GWR+R+ +KL ++ + ++L+ +VDLG+
Sbjct: 1 MTNKKQSASSQRWLKEHFDDKYVQEAQKKGWRSRAVFKLDEVQSRDKLLRPAMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PGSWSQ A G +V+A DIL M+ + GV F + DF + + + I G
Sbjct: 61 APGSWSQYLAEKVGDK---GQVIACDILPMDSLAGVDFLQGDFREEAVLSALLKRIDGKN 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VLSDMA G+ +D +M L E A ++L G F+VK FQG + L
Sbjct: 118 VDVVLSDMAPNMSGNNSVDQAGSMYLVELALDMCNQVLKKNGAFIVKVFQGEGFDQFLQD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP ASRA S E++++A G++
Sbjct: 178 VRNSFKTVKIRKPDASRARSREVYIVATGYK 208
>gi|223041504|ref|ZP_03611707.1| ribosomal RNA large subunit methyltransferase J [Actinobacillus
minor 202]
gi|223017762|gb|EEF16169.1| ribosomal RNA large subunit methyltransferase J [Actinobacillus
minor 202]
Length = 208
Score = 194 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R SS WL H D +VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 RKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
WSQ A GS R++A DILDM PI+GV F + DF + + + +G + D+
Sbjct: 63 GWSQYAVTQIGSK---GRIIACDILDMNPIVGVDFLQGDFREESVLNALLERVGDDMVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG ++ L ++
Sbjct: 120 VMSDMAPNFSGTPSVDIPRAMYLVELALDMCRQVLAPKGSFVVKVFQGEGFDEYLRDIRA 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 180 MFTTVKVRKPEASRDRSREVYIVATGYK 207
>gi|62181805|ref|YP_218222.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224585092|ref|YP_002638891.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|75480572|sp|Q57JH1|RLME_SALCH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809558|sp|C0PZ62|RLME_SALPC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|62129438|gb|AAX67141.1| Ribosomal RNA large subunit methyltransferase J [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|224469620|gb|ACN47450.1| cell division protein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322716292|gb|EFZ07863.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 208
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL+ H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLHEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|167035711|ref|YP_001670942.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas putida GB-1]
gi|189040323|sp|B0KHY6|RLME_PSEPG RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|166862199|gb|ABZ00607.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas putida GB-1]
Length = 208
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS +WL H NDP+V++AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 4 RSKSSANWLREHFNDPFVKQAQKDGYRSRASYKLLEIQEKDRLIRPGMSVIDLGAAPGGW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + + I +A+G + DLV+
Sbjct: 64 SQVTSRLIG---GQGRLIASDILEMDSIADVTFIQGDFTHDEVLQRILEAVGDSHVDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + L ++ F
Sbjct: 121 SDMAPNMSGTPAVDIPRAMFLCELALDLATRVLKPGGDFLIKIFQGEGFDVYLKDVRSKF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LL +GF+
Sbjct: 181 DKVQMRKPSSSRDRSREQYLLGRGFK 206
>gi|24372779|ref|NP_716821.1| 23S rRNA methyltransferase J [Shewanella oneidensis MR-1]
gi|81462880|sp|Q8EHM3|RLME_SHEON RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|24346860|gb|AAN54266.1|AE015563_6 ribosomal RNA large subunit methyltransferase J [Shewanella
oneidensis MR-1]
Length = 209
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ AQ G R+R+A+KL ++ +K Q+++ +VDLG++PG
Sbjct: 4 KKRTASSNRWMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDL 138
WSQVA ++ G +V+A DIL M+PI+GV F + DF + E + + D+
Sbjct: 64 GWSQVAVKLVGDK---GKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG ++ + +K+
Sbjct: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKE 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SRA S E++L+A G++
Sbjct: 181 AFKVVKTRKPDSSRARSREVYLVATGYK 208
>gi|240949042|ref|ZP_04753394.1| 23S rRNA methyltransferase J [Actinobacillus minor NM305]
gi|307261051|ref|ZP_07542733.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|240296555|gb|EER47178.1| 23S rRNA methyltransferase J [Actinobacillus minor NM305]
gi|306869353|gb|EFN01148.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 208
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R SS WL H D +VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 RKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
WSQ A GS R++A DILDM PI+GV F + DF + + + +G + D+
Sbjct: 63 GWSQYAVTQIGSK---GRIIACDILDMNPIVGVDFLQGDFREESVLNALLERVGDDMVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG ++ L ++
Sbjct: 120 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLAPKGSFVVKVFQGEGFDEYLRDIRA 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 180 MFTTVKVRKPEASRDRSREVYIVATGYK 207
>gi|107103849|ref|ZP_01367767.1| hypothetical protein PaerPA_01004920 [Pseudomonas aeruginosa PACS2]
Length = 207
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S+ WL H +DPYV+ AQ +G+R+R++YKLL+I EK +IL+ +VDLG++PG W
Sbjct: 3 RSKTSQRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G ++ R++A DIL+M+ I V F + DF + + I +AIG +P DLV+
Sbjct: 63 SQVTSRVIG---DHGRLIASDILEMDSIPDVTFIQGDFTEDAVFARILEAIGDHPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G R D R M LCE A A +L GGDFL+K FQG + ++ F
Sbjct: 120 SDMAPNMSGVRAADQPRAMYLCELALDLAGRVLRPGGDFLIKIFQGEGFDQYHKQAREMF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP++SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPLSSRDRSREQYLLARGFR 205
>gi|260771821|ref|ZP_05880739.1| ribosomal RNA large subunit methyltransferase J [Vibrio
metschnikovii CIP 69.14]
gi|260613113|gb|EEX38314.1| ribosomal RNA large subunit methyltransferase J [Vibrio
metschnikovii CIP 69.14]
Length = 209
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV A+ +G+R+R+ +KL +I K ++L++ +VDLG+
Sbjct: 1 MSKQKHSASSSRWLKEHFDDIYVHEAKKKGYRSRAIFKLKEIQSKDKLLRTGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGN 135
+PG WSQ AA I G + +V+A DIL M+ I GV F + DF + + +
Sbjct: 61 APGGWSQYAASIVG---DTGQVIACDILPMDSIAGVSFLQGDFREESVLAALIERIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNMAGNNSVDQPRAMYLVELALDMCRQVLIPNGSFVVKVFQGEGFDHYVQE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E++++A G++
Sbjct: 178 VRSMFKAVKIRKPDSSRARSREVYVVATGYK 208
>gi|261380964|ref|ZP_05985537.1| ribosomal RNA large subunit methyltransferase J [Neisseria subflava
NJ9703]
gi|284796223|gb|EFC51570.1| ribosomal RNA large subunit methyltransferase J [Neisseria subflava
NJ9703]
Length = 206
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 120/206 (58%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+IN+K ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINQKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++ G V A+DIL M+ I GV F + DF + E + P DLV+
Sbjct: 64 SQVAAKLVG---KTGAVFALDILPMDAIEGVSFIQGDFREDAVLEQFEALLDNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + +++ F
Sbjct: 121 CDMAPNMSGNAVTDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYTAAMREIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 ASVQTRKPDASRNRSSEIYLLGKNKR 206
>gi|332993370|gb|AEF03425.1| 23S rRNA methyltransferase J [Alteromonas sp. SN2]
Length = 209
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS+ WL H ND YVQ+AQ +G R+R+ +KL +I +K +++ +VDLG+
Sbjct: 1 MTKKKHSASSKRWLTEHFNDHYVQKAQKQGKRSRAFFKLEEIQQKDKLISKGNTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ+A+ + N +V+A DIL M+ I+GV F + DF D + IGGN
Sbjct: 61 APGGWSQLASELVRDN---GQVIACDILPMDSIVGVDFLQGDFRDEAVLNALLNRIGGNT 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VLSDMA G+ +D +M LCE A ++L GG F++K FQG + L
Sbjct: 118 VDIVLSDMAPNLSGNAAVDQAGSMYLCELALDMCHQVLKPGGGFMIKVFQGEGFDTFLRA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+ F + KP +SR+ S E++L+A G++
Sbjct: 178 LRDSFTTIKTRKPDSSRSRSREVYLVALGYK 208
>gi|194098119|ref|YP_002001167.1| putative cell division protein [Neisseria gonorrhoeae NCCP11945]
gi|239998575|ref|ZP_04718499.1| putative cell division protein [Neisseria gonorrhoeae 35/02]
gi|240080282|ref|ZP_04724825.1| putative cell division protein [Neisseria gonorrhoeae FA19]
gi|240115234|ref|ZP_04729296.1| putative cell division protein [Neisseria gonorrhoeae PID18]
gi|240123075|ref|ZP_04736031.1| putative cell division protein [Neisseria gonorrhoeae PID332]
gi|240125327|ref|ZP_04738213.1| putative cell division protein [Neisseria gonorrhoeae SK-92-679]
gi|240127779|ref|ZP_04740440.1| putative cell division protein [Neisseria gonorrhoeae SK-93-1035]
gi|254493296|ref|ZP_05106467.1| cell division protein FtsJ [Neisseria gonorrhoeae 1291]
gi|260440948|ref|ZP_05794764.1| putative cell division protein [Neisseria gonorrhoeae DGI2]
gi|268594434|ref|ZP_06128601.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae 35/02]
gi|268596430|ref|ZP_06130597.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae FA19]
gi|268600914|ref|ZP_06135081.1| cell division protein [Neisseria gonorrhoeae PID18]
gi|268681701|ref|ZP_06148563.1| cell division protein FtsJ [Neisseria gonorrhoeae PID332]
gi|268683928|ref|ZP_06150790.1| cell division protein [Neisseria gonorrhoeae SK-92-679]
gi|268686171|ref|ZP_06153033.1| cell division protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044276|ref|ZP_06569985.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae DGI2]
gi|226703876|sp|B4RK82|RLME_NEIG2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|193933409|gb|ACF29233.1| putative cell division protein [Neisseria gonorrhoeae NCCP11945]
gi|226512336|gb|EEH61681.1| cell division protein FtsJ [Neisseria gonorrhoeae 1291]
gi|268547823|gb|EEZ43241.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae 35/02]
gi|268550218|gb|EEZ45237.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae FA19]
gi|268585045|gb|EEZ49721.1| cell division protein [Neisseria gonorrhoeae PID18]
gi|268621985|gb|EEZ54385.1| cell division protein FtsJ [Neisseria gonorrhoeae PID332]
gi|268624212|gb|EEZ56612.1| cell division protein [Neisseria gonorrhoeae SK-92-679]
gi|268626455|gb|EEZ58855.1| cell division protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011170|gb|EFE03166.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae DGI2]
gi|317163849|gb|ADV07390.1| putative cell division protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 206
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ HIND YV AQ +G+RAR+AYKLL+INEK +I++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHINDHYVHMAQKDGYRARAAYKLLEINEKDKIIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++TG++ V A+DIL ME I GV F + DF + D + P DLV+
Sbjct: 64 SQVAAKLTGTSGT---VFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + +++ F
Sbjct: 121 CDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 GTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|332970372|gb|EGK09364.1| ribosomal RNA large subunit methyltransferase J [Kingella kingae
ATCC 23330]
Length = 213
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 91/206 (44%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS W++ H+NDPYVQRAQ +G+RAR+AYKLL+INEK +++++ + DLGS+PGSW
Sbjct: 11 RSKSSSAWMHEHVNDPYVQRAQKDGYRARAAYKLLEINEKDKLIKNGTALADLGSAPGSW 70
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQ+AA++ G +V A+DIL M+ + GV F + DF + +G P DLV+
Sbjct: 71 SQIAAKLVG---KEGKVFALDILPMDALDGVDFIQGDFREESVLAQFENLLGNRPLDLVI 127
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ +D R+ LCE A FA L GG+FLVK FQG + + +K F
Sbjct: 128 CDMAPNMSGNAVMDQARSFYLCELALDFAQNHLKTGGNFLVKVFQGSGYQEYMAAMKTVF 187
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 188 ATVQTRKPDASRNRSSEIYLLGKNKR 213
>gi|241758799|ref|ZP_04756912.1| ribosomal RNA large subunit methyltransferase J [Neisseria
flavescens SK114]
gi|241321007|gb|EER57220.1| ribosomal RNA large subunit methyltransferase J [Neisseria
flavescens SK114]
Length = 206
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 120/206 (58%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+IN+K ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINQKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++ G V A+DIL M+ I GV F + DF + E + P DLV+
Sbjct: 64 SQVAAKLVG---KTGAVFALDILPMDAIEGVSFIQGDFREDAVLEQFEALLDNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + +++ F
Sbjct: 121 CDMAPNMSGNAVTDQARSFYLCELALDFAFQHLKTGGSFLVKVFQGAGYQEYTAAMREIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 ASVQTRKPDASRNRSSEIYLLGKNKR 206
>gi|284006661|emb|CBA71923.1| 23S rRNA methyltransferase J [Arsenophonus nasoniae]
Length = 209
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ SS WL H +D YV +AQ +G+R+R+ +KL +I + +I + +VDLG+
Sbjct: 1 MANKKRSASSSRWLQEHFSDKYVLQAQKKGFRSRAWFKLDEIQQSDKIFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYAVSKVGLT---GRLIACDLLLMDPIVGVDFLQGDFRDEQILKALLERVGDKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R+M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRSMYLVELALDMCRDVLATGGSFIVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFLKVKIRKPDASRSRSREVYIVATGRK 208
>gi|52425018|ref|YP_088155.1| 23S rRNA methyltransferase J [Mannheimia succiniciproducens
MBEL55E]
gi|81387204|sp|Q65TZ0|RLME_MANSM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|52307070|gb|AAU37570.1| FtsJ protein [Mannheimia succiniciproducens MBEL55E]
Length = 208
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 KKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQSDRLFKPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDL 138
WSQ G R++A DILDM+PI+GV F + DF D + + + D+
Sbjct: 63 GWSQYVVTQIGDK---GRIIACDILDMDPIVGVDFLQGDFRDENVLAALLDRVGEDQVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG ++ L ++
Sbjct: 120 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLAKKGSFVVKVFQGEGFDEYLREIRS 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G+R
Sbjct: 180 LFTTVKVRKPEASRDRSREVYIVATGYR 207
>gi|217970150|ref|YP_002355384.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thauera sp. MZ1T]
gi|217507477|gb|ACK54488.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thauera sp. MZ1T]
Length = 207
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 87/208 (41%), Positives = 128/208 (61%), Gaps = 4/208 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+SR W++ H+NDP+VQRAQ EG+RAR+A+KLL+I+E+ +L+ +VDLG++PGS
Sbjct: 2 KKNKTSRAWVHDHVNDPWVQRAQAEGYRARAAFKLLEIDERDHLLRPGAVVVDLGAAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
W Q+A + G R+ A+D+L MEP+ GV+F DF + E + +GG + D+V
Sbjct: 62 WCQLAVKRCGPK---GRIFALDLLPMEPVAGVEFLLGDFTEDAVLEELEARLGGASVDVV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R++ LCE A FA+ L GG F+VK FQG + ++
Sbjct: 119 LSDMAPNLSGVATVDQARSVHLCELALDFAVRHLKPGGQFVVKVFQGEGFMEYRKQMEAA 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F V KP ASR S E++L+ +G R+
Sbjct: 179 FVSVQVRKPKASRDRSAEVYLVGRGPRR 206
>gi|26991402|ref|NP_746827.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas putida
KT2440]
gi|148549787|ref|YP_001269889.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas putida F1]
gi|81439657|sp|Q88DV0|RLME_PSEPK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040322|sp|A5W995|RLME_PSEP1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|24986472|gb|AAN70291.1|AE016670_1 ribosomal RNA large subunit methyltransferase J [Pseudomonas putida
KT2440]
gi|148513845|gb|ABQ80705.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas putida F1]
gi|313500628|gb|ADR61994.1| Ribosomal RNA large subunit methyltransferase E [Pseudomonas putida
BIRD-1]
Length = 207
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS +WL H NDP+V++AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 4 RSKSSANWLREHFNDPFVKQAQKDGYRSRASYKLLEIQEKDRLIRPGMSVIDLGAAPGGW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + + I +A+G + DLV+
Sbjct: 64 SQVTSRLIG---GQGRLIASDILEMDSIADVTFIQGDFTHDEVLQRILEAVGDSHVDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + L ++ F
Sbjct: 121 SDMAPNMSGTPAVDIPRAMFLCELALDLATRVLKPGGDFLIKIFQGEGFDVYLKDVRSKF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LL +GF+
Sbjct: 181 DKVQMRKPSSSRDRSREQYLLGRGFK 206
>gi|258544935|ref|ZP_05705169.1| ribosomal RNA large subunit methyltransferase J [Cardiobacterium
hominis ATCC 15826]
gi|258519855|gb|EEV88714.1| ribosomal RNA large subunit methyltransferase J [Cardiobacterium
hominis ATCC 15826]
Length = 208
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S+ WL H ND YVQ+AQ EG+R+R+ YKL++I EK ++++ +V+LG++PG W
Sbjct: 3 RSKTSQRWLKEHFNDIYVQKAQQEGYRSRAVYKLMEIQEKDRLIRPGMVVVELGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVL 140
SQ A+ G R++A+DIL M+ + V F DF + + + +LV+
Sbjct: 63 SQYVAQCLG---GRGRMIALDILPMDALPDVTFILGDFREQAVLDALYAELGDSAVNLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA T G R +D ++M L E A FA L GGDFL K F G + +L LK F
Sbjct: 120 SDMAPNTSGVRSVDQAKSMYLVELALDFAQSRLAAGGDFLTKIFHGPGFDTLLRSLKSQF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFRK 227
V KP ASRA S E +LLA+GF++
Sbjct: 180 LTVQTRKPEASRARSQETYLLARGFKR 206
>gi|27365050|ref|NP_760578.1| 23S rRNA methyltransferase J [Vibrio vulnificus CMCP6]
gi|37680900|ref|NP_935509.1| 23S rRNA methyltransferase J [Vibrio vulnificus YJ016]
gi|320155433|ref|YP_004187812.1| cell division protein FtsJ/Ribosomal RNA large subunit
methyltransferase E [Vibrio vulnificus MO6-24/O]
gi|81448574|sp|Q8DBW7|RLME_VIBVU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|81756680|sp|Q7MI01|RLME_VIBVY RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|27361196|gb|AAO10105.1| Ribosomal RNA large subunit methyltransferase J [Vibrio vulnificus
CMCP6]
gi|37199650|dbj|BAC95480.1| 23S rRNA methylase [Vibrio vulnificus YJ016]
gi|319930745|gb|ADV85609.1| cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase E [Vibrio vulnificus MO6-24/O]
Length = 209
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +KL +I +K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSSRWLKEHFDDKYANEARRKGYRSRAIFKLEEIQQKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ A G ++ RV+A DIL M+ I GV F + DF + E + +
Sbjct: 61 APGGWSQYA---IGVVGDSGRVIACDILPMDSIAGVSFLQGDFREDAVLEALLERIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG ++ +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDEYVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRNMFKVVKIRKPDSSRARSREVFVVATGYK 208
>gi|70734330|ref|YP_257970.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
fluorescens Pf-5]
gi|83305665|sp|Q4KIG3|RLME_PSEF5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|68348629|gb|AAY96235.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
fluorescens Pf-5]
Length = 209
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S +WL H NDP+V+ AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 3 RSKTSHNWLKEHFNDPFVKMAQKDGYRSRASYKLLEIQEKDRLIRPGMSVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + I +A+G + DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDAVLAQILEAVGNSEVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG ++ +++ F
Sbjct: 120 SDMAPNMSGLAAVDMPRAMFLCELALDLAGRVLRPGGDFLIKIFQGEGFDEYHKSVRQMF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+KV KP +SR S E +LL +GFR
Sbjct: 180 EKVQMRKPSSSRDRSREQYLLGRGFR 205
>gi|330807476|ref|YP_004351938.1| ribosomal RNA large subunit methyltransferase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327375584|gb|AEA66934.1| Ribosomal RNA large subunit methyltransferase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 210
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 83/206 (40%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S WL H NDP+V+ AQ +G+R+R++YKLL+I E+ ++++ ++DLG++PG W
Sbjct: 3 RSKTSLKWLQEHFNDPFVKMAQKDGYRSRASYKLLEIQERDRLIRPGMSVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVL 140
SQV +R+ G ++A DIL+M+ I V F + DF + I +A+ DLV+
Sbjct: 63 SQVTSRLIG---GQGTLIASDILEMDSIPDVTFIQGDFTEDAVLAQILEAVGKNEVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R+M LCE A A +L GGDFL+K FQG ++ ++K F
Sbjct: 120 SDMAPNMSGLASVDMPRSMFLCELALDLATRVLKPGGDFLIKVFQGEGFDEYHKSVRKQF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+KV KP +SR S E +LL +GFR
Sbjct: 180 EKVTTRKPKSSRDRSREQYLLGRGFR 205
>gi|126175447|ref|YP_001051596.1| 23S rRNA methyltransferase J [Shewanella baltica OS155]
gi|153001798|ref|YP_001367479.1| 23S rRNA methyltransferase J [Shewanella baltica OS185]
gi|160876531|ref|YP_001555847.1| 23S rRNA methyltransferase J [Shewanella baltica OS195]
gi|217972307|ref|YP_002357058.1| 23S rRNA methyltransferase J [Shewanella baltica OS223]
gi|304410273|ref|ZP_07391892.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella baltica
OS183]
gi|307302016|ref|ZP_07581774.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella baltica
BA175]
gi|189040333|sp|A3D7L4|RLME_SHEB5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040335|sp|A6WRH7|RLME_SHEB8 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040336|sp|A9KZX9|RLME_SHEB9 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809559|sp|B8E6M4|RLME_SHEB2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|125998652|gb|ABN62727.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella baltica
OS155]
gi|151366416|gb|ABS09416.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella baltica
OS185]
gi|160862053|gb|ABX50587.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella baltica
OS195]
gi|217497442|gb|ACK45635.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella baltica
OS223]
gi|304351682|gb|EFM16081.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella baltica
OS183]
gi|306914054|gb|EFN44475.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella baltica
BA175]
gi|315268725|gb|ADT95578.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella baltica
OS678]
Length = 209
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS W+ H +D YV+ AQ G R+R+A+KL +I +K Q+++ +VDLG++PG
Sbjct: 5 KRTASSNRWMLEHFDDHYVKLAQKMGLRSRAAFKLEEIQQKDQLIRPGMTVVDLGAAPGG 64
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQVA ++ G + +V+A DIL M+PI+GV F + DF + + + +G D+V
Sbjct: 65 WSQVAVKLAG---DRGKVIACDILPMDPIVGVDFLQGDFREDKVLQALLTRVGDAKVDVV 121
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A ++L G F VK FQG ++ + +K
Sbjct: 122 LSDMAPNMSGSDSVDQPRAMYLVELALDMCHQVLAPNGCFAVKVFQGEGFDEYMKAVKAV 181
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SRA S E++L+A G++
Sbjct: 182 FKVVKTRKPDSSRARSREVYLVATGYK 208
>gi|260771180|ref|ZP_05880107.1| ribosomal RNA large subunit methyltransferase J [Vibrio furnissii
CIP 102972]
gi|260613777|gb|EEX38969.1| ribosomal RNA large subunit methyltransferase J [Vibrio furnissii
CIP 102972]
Length = 209
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV A+ +G+R+R+ +K+ +I K ++LQ + +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLQPSMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA I G + +V+A DIL M+ I GV F + DF + + + +
Sbjct: 61 APGGWSQYAAGIVGES---GQVIACDILPMDSIAGVSFLQGDFREEAVLDALLERIQPNM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQYVKD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E++++A G++
Sbjct: 178 VRDMFKAVKIRKPDSSRARSREVYIVATGYK 208
>gi|46143709|ref|ZP_00134554.2| COG0293: 23S rRNA methylase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208076|ref|YP_001053301.1| 23S rRNA methyltransferase J [Actinobacillus pleuropneumoniae L20]
gi|165976009|ref|YP_001651602.1| 23S rRNA methyltransferase J [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190149909|ref|YP_001968434.1| ribosomal RNA large subunit methyltransferase J [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307245455|ref|ZP_07527543.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307247568|ref|ZP_07529612.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251350|ref|ZP_07533266.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307254409|ref|ZP_07536247.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307256619|ref|ZP_07538399.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307258868|ref|ZP_07540600.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307263233|ref|ZP_07544853.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|158513505|sp|A3MZW0|RLME_ACTP2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703278|sp|B3H123|RLME_ACTP7 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703279|sp|B0BUF3|RLME_ACTPJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|126096868|gb|ABN73696.1| ribosomal RNA large subunit methyltransferase J [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165876110|gb|ABY69158.1| ribosomal RNA large subunit methyltransferase J [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189915040|gb|ACE61292.1| ribosomal RNA large subunit methyltransferase J [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306853796|gb|EFM86013.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306855933|gb|EFM88092.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306856591|gb|EFM88731.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306862708|gb|EFM94664.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306864867|gb|EFM96770.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306867219|gb|EFM99075.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306871450|gb|EFN03174.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 208
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R SS WL H D +VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 RKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
WSQ A GS R++A DILDM PI+GV F + DF + + + +G + D+
Sbjct: 63 GWSQYAVTQIGSK---GRIIACDILDMNPIVGVDFLQGDFREESVLNALLERVGDDMVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG +D L ++
Sbjct: 120 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLAPKGSFVVKVFQGEGFDDYLRDIRA 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 180 MFTTVKVRKPEASRDRSREVYIVATGYK 207
>gi|121634592|ref|YP_974837.1| putative cell division protein [Neisseria meningitidis FAM18]
gi|158513144|sp|A1KT57|RLME_NEIMF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120866298|emb|CAM10039.1| putative cell division protein [Neisseria meningitidis FAM18]
Length = 206
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++TG++ V A+DIL ME I GV F + DF + D + P DLV+
Sbjct: 64 SQVAAKLTGTSGA---VFALDILPMEAIGGVSFIQGDFRENDVLAQFEGLLNNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + +++ F
Sbjct: 121 CDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREFF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 GTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|254516625|ref|ZP_05128684.1| ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium NOR5-3]
gi|219675048|gb|EED31415.1| ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium NOR5-3]
Length = 212
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 84/205 (40%), Positives = 127/205 (61%), Gaps = 4/205 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WL H DPYVQ+AQ +G+R+R+ YKLL++ E+ ++++ I+DLGS+PG
Sbjct: 3 KKRSSSKAWLREHREDPYVQQAQRDGYRSRACYKLLELQERERLIRPGMTILDLGSAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVAA + G ++ +V+A DIL M+ I GV F + DF + +E I + G P DLV
Sbjct: 63 WSQVAAALVG---DHGQVIASDILPMDSIAGVDFVEGDFTENAVFERILTTLNGKPADLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D +++ L E A A +L GG F+ K FQG +++ ++
Sbjct: 120 ISDMAPNMSGVSAVDQPKSIYLVELALDMACRVLAPGGVFVTKVFQGEGFDELFKATREQ 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKG 224
F KV+ KP ASR S E++L+A+G
Sbjct: 180 FDKVLTRKPTASRPRSREVYLVARG 204
>gi|323492035|ref|ZP_08097200.1| 23S rRNA methyltransferase J [Vibrio brasiliensis LMG 20546]
gi|323313764|gb|EGA66863.1| 23S rRNA methyltransferase J [Vibrio brasiliensis LMG 20546]
Length = 209
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKMEEIQTKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G +++A D+L M+PI GV F + DF + E + +
Sbjct: 61 APGGWSQYAAKIVGEE---GQIIACDLLPMDPIAGVSFLQGDFREEAVLEALLDRIQPSM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQFVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRDTFKAVKIRKPDSSRARSREVFVVATGYK 208
>gi|261400135|ref|ZP_05986260.1| ribosomal RNA large subunit methyltransferase J [Neisseria
lactamica ATCC 23970]
gi|269210130|gb|EEZ76585.1| ribosomal RNA large subunit methyltransferase J [Neisseria
lactamica ATCC 23970]
Length = 206
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++TG++ V A+DIL MEPI GV F + DF + D + P DLV+
Sbjct: 64 SQVAAKLTGTSGA---VFALDILPMEPIGGVSFIQGDFRENDVLAQFEGLLNNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + +++ F
Sbjct: 121 CDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 GTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|54307808|ref|YP_128828.1| 23S rRNA methyltransferase J [Photobacterium profundum SS9]
gi|81400134|sp|Q6LUJ9|RLME_PHOPR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|46912231|emb|CAG19026.1| 23S rRNA methylase [Photobacterium profundum SS9]
Length = 209
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS WL H +D YVQ AQ G+R+R+ +K+ +I +K ++L+ +VDLG++PG
Sbjct: 5 KQSASSGRWLKEHFDDKYVQEAQKRGYRSRAIFKIEEIQKKDKLLKPGMTVVDLGAAPGG 64
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLV 139
WSQ AA + G + +V+A DIL M+ + GV F + DF + + + D+V
Sbjct: 65 WSQYAAEVVG---DEGQVIACDILSMDSLPGVSFLQGDFREEAVLSALLERIQPDMVDVV 121
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G+ D R M L E A ++L G F VK FQG + L ++
Sbjct: 122 LSDMAPNMSGNLASDQPRAMYLVELALEMCKQVLAPNGSFAVKVFQGEGFDQYLAEIRNM 181
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SR S E++++A G++
Sbjct: 182 FKVVKIRKPDSSRDRSREVYIVATGYK 208
>gi|261868123|ref|YP_003256045.1| ribosomal RNA large subunit methyltransferase J [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413455|gb|ACX82826.1| ribosomal RNA large subunit methyltransferase J [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 209
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSTRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G N R++A D+L+M+PI+GV F + DF D + + + + G
Sbjct: 61 APGGWSQYVVSQIGRN---GRIIACDLLEMDPIVGVDFLQGDFSDENVLNILLERVGEGK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQILANKGSFVVKVFQGEGFDEYLKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFSVVKVRKPEASRDRSREVYIVASGYK 208
>gi|254508251|ref|ZP_05120375.1| ribosomal RNA large subunit methyltransferase J [Vibrio
parahaemolyticus 16]
gi|219548868|gb|EED25869.1| ribosomal RNA large subunit methyltransferase J [Vibrio
parahaemolyticus 16]
Length = 209
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKMEEIQTKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G ++ +++A D+L M+PI GV F + DF D E + +
Sbjct: 61 APGGWSQYAAKIIG---DSGQIIACDLLPMDPIAGVSFLQGDFRDDAVLEALLDRIQPSM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQFVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRDMFKVVKIRKPDSSRARSREVFVVATGYK 208
>gi|254804677|ref|YP_003082898.1| ribosomal RNA large subunit methyltransferase j [Neisseria
meningitidis alpha14]
gi|254668219|emb|CBA04997.1| ribosomal RNA large subunit methyltransferase j [Neisseria
meningitidis alpha14]
gi|254671945|emb|CBA04325.1| cell division protein FtsJ [Neisseria meningitidis alpha275]
gi|325203884|gb|ADY99337.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M01-240355]
Length = 206
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+IN+K ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINDKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++TGS+ V A+DIL ME I GV F + DF + D + P DLV+
Sbjct: 64 SQVAAKLTGSSGA---VFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + +++ F
Sbjct: 121 CDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 GTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|253997068|ref|YP_003049132.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylotenera mobilis
JLW8]
gi|253983747|gb|ACT48605.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylotenera mobilis
JLW8]
Length = 206
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 124/208 (59%), Gaps = 4/208 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ W+ H+NDPYV+ AQ +G+RAR+AYKL++I++K +I++ +VDLGS+PGS
Sbjct: 2 KPSRTSKAWMQEHLNDPYVKLAQKDGYRARAAYKLMEIDDKDKIIKPGMTVVDLGSAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNPDLV 139
WSQV + +V+A+DIL+M PI GV F + DF + + + Q DLV
Sbjct: 62 WSQVTVQRLK---GQGKVIALDILEMTPISGVTFIQGDFREDAVLKLLEQTLNNLQVDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
++DMA G + +D L E A F+ + L G+FLVK F G +IL +++
Sbjct: 119 IADMAPNISGVKDVDQAGAAYLTELALEFSKDWLKPNGNFLVKVFIGAGFEEILQSMRQM 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F KV+ KP ASR S E++LL G ++
Sbjct: 179 FTKVVTRKPKASRDRSSEVYLLGIGRKE 206
>gi|148979038|ref|ZP_01815283.1| 23S rRNA methyltransferase J [Vibrionales bacterium SWAT-3]
gi|145962011|gb|EDK27299.1| 23S rRNA methyltransferase J [Vibrionales bacterium SWAT-3]
Length = 209
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKMEEIQTKDKLLSPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G N +++A D+L M+PI GV F + DF + E + +
Sbjct: 61 APGGWSQYAAKIVGDN---GQIIACDLLPMDPIAGVSFLQGDFREDAVLEALLERIQPNM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLATDGSFVVKVFQGEGFDQYVKD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VREMFKTVKVRKPDSSRARSREVFIVATGYK 208
>gi|323497766|ref|ZP_08102780.1| 23S rRNA methyltransferase J [Vibrio sinaloensis DSM 21326]
gi|323317113|gb|EGA70110.1| 23S rRNA methyltransferase J [Vibrio sinaloensis DSM 21326]
Length = 209
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKMEEIQTKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G + +++A D+L M+PI GV F + DF + E + +
Sbjct: 61 APGGWSQYAAKIIGED---GQIIACDLLPMDPIAGVSFLQGDFREDAVLEALLERIQPSM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQFVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 IRDTFKVVKIRKPDSSRARSREVFVVATGYK 208
>gi|15676697|ref|NP_273841.1| cell division protein FtsJ [Neisseria meningitidis MC58]
gi|161869743|ref|YP_001598910.1| cell division protein [Neisseria meningitidis 053442]
gi|218767917|ref|YP_002342429.1| putative cell division protein [Neisseria meningitidis Z2491]
gi|304387890|ref|ZP_07370064.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis ATCC 13091]
gi|81542244|sp|Q9JQX5|RLME_NEIMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|81707224|sp|Q7DDL2|RLME_NEIMB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040316|sp|A9M3N1|RLME_NEIM0 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|7226032|gb|AAF41212.1| cell division protein FtsJ [Neisseria meningitidis MC58]
gi|121051925|emb|CAM08231.1| putative cell division protein [Neisseria meningitidis Z2491]
gi|161595296|gb|ABX72956.1| cell division protein [Neisseria meningitidis 053442]
gi|261392834|emb|CAX50415.1| ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase; 23S rRNA m2U2552
methyltransferase; cell division protein FtsJ)
[Neisseria meningitidis 8013]
gi|304338155|gb|EFM04291.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis ATCC 13091]
gi|308388985|gb|ADO31305.1| putative cell division protein [Neisseria meningitidis alpha710]
gi|316983790|gb|EFV62771.1| ftsJ-like methyltransferase family protein [Neisseria meningitidis
H44/76]
gi|319410165|emb|CBY90501.1| ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase; 23S rRNA m2U2552
methyltransferase; cell division protein FtsJ)
[Neisseria meningitidis WUE 2594]
gi|325127924|gb|EGC50827.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis N1568]
gi|325129969|gb|EGC52768.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis OX99.30304]
gi|325134056|gb|EGC56711.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M13399]
gi|325135979|gb|EGC58589.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M0579]
gi|325144164|gb|EGC66471.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M01-240013]
gi|325198017|gb|ADY93473.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis G2136]
gi|325200517|gb|ADY95972.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis H44/76]
gi|325202406|gb|ADY97860.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M01-240149]
gi|325206360|gb|ADZ01813.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M04-240196]
gi|325207842|gb|ADZ03294.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis NZ-05/33]
Length = 206
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++TG++ V A+DIL ME I GV F + DF + D + P DLV+
Sbjct: 64 SQVAAKLTGTSGA---VFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + +++ F
Sbjct: 121 CDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 GTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|157962886|ref|YP_001502920.1| 23S rRNA methyltransferase J [Shewanella pealeana ATCC 700345]
gi|189040338|sp|A8H748|RLME_SHEPA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|157847886|gb|ABV88385.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella pealeana ATCC
700345]
Length = 209
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ +Q G R+R+A+K+ +I EK ++++ +VDLG++PG
Sbjct: 4 KKRTASSSRWMQEHFDDHYVKLSQKRGLRSRAAFKIEEIQEKDKLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDL 138
WSQ+A ++ G +V+A DIL M+PI+GV F + DF + + + +G D+
Sbjct: 64 GWSQIAVKLAGDK---GKVIACDILPMDPIVGVDFLQGDFREEKVLDALLTRVGDAKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG ++ + +K+
Sbjct: 121 VLSDMAPNMSGTGGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKE 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SR S E++L+A G++
Sbjct: 181 AFKTVKTRKPDSSRPRSREVYLVATGYK 208
>gi|226941815|ref|YP_002796889.1| FtsJ [Laribacter hongkongensis HLHK9]
gi|226716742|gb|ACO75880.1| FtsJ [Laribacter hongkongensis HLHK9]
Length = 205
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S WLN H++D +V AQ EG+R+R+AYKLL+I++K ++L+ + DLGS+PGSW
Sbjct: 3 RSKTSAAWLNEHVHDHWVHMAQKEGYRSRAAYKLLEIHDKDKLLRPGMTVADLGSAPGSW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA I G ++ RV A+D+L+M I GV F + DF + + + G P DLV+
Sbjct: 63 SQVAAGIVG---DSGRVFALDLLEMAAIPGVDFIQGDFREDAVLDQFETLLAGRPLDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G ID R LCE A FA L GG FLVK FQG ND L ++ F
Sbjct: 120 SDMAPNLSGMASIDQARAAYLCELALDFARSHLKPGGAFLVKVFQGSEFNDYLAAMRSGF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+V+ KP ASR S E++LL KG R
Sbjct: 180 TQVLSRKPKASRDRSAEIYLLGKGLR 205
>gi|261378830|ref|ZP_05983403.1| ribosomal RNA large subunit methyltransferase J [Neisseria cinerea
ATCC 14685]
gi|269144809|gb|EEZ71227.1| ribosomal RNA large subunit methyltransferase J [Neisseria cinerea
ATCC 14685]
Length = 206
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/207 (44%), Positives = 124/207 (59%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGS
Sbjct: 3 SRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTILADLGSAPGS 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVAA++ G + V A+DIL ME + GV F + DF + D + P DLV
Sbjct: 63 WSQVAAKLAGPSGA---VFALDILPMEAVNGVSFIQGDFRENDVLAQFETLLNNRPLDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+ DMA G+ D R++ LCE A FA + L GG FLVK FQG + + ++K
Sbjct: 120 ICDMAPNMSGNAVSDQARSLYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMRKV 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++LL K R
Sbjct: 180 FGTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|254292202|ref|ZP_04962970.1| cell division protein FtsJ [Vibrio cholerae AM-19226]
gi|150421883|gb|EDN13862.1| cell division protein FtsJ [Vibrio cholerae AM-19226]
Length = 209
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV A+ +G+R+R+ +K+ +I K ++L++ +VDLG+
Sbjct: 1 MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA++ G RV+A D+L ME I GV F + DF + + +
Sbjct: 61 APGGWSQFAAKVVGEG---GRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG +D +
Sbjct: 118 VDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR+ S E+F++A G++
Sbjct: 178 VRNLFKVVKIRKPDSSRSRSREVFIVATGYK 208
>gi|84387293|ref|ZP_00990314.1| cell division protein FtsJ [Vibrio splendidus 12B01]
gi|84377940|gb|EAP94802.1| cell division protein FtsJ [Vibrio splendidus 12B01]
Length = 209
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ G+R+R+ +K+ +I K ++L IVDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKRGYRSRAYFKMEEIQTKDKLLTPGMTIVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G N +++A D+L M+PI GV F + DF + + + +
Sbjct: 61 APGGWSQYAAKIIGDN---GQIIACDLLPMDPIAGVSFLQGDFREEAVLDALLERIQPNM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLATNGSFVVKVFQGEGFDQYVKD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VREMFKTVKVRKPDSSRARSREVFIVATGYK 208
>gi|325131968|gb|EGC54667.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis M6190]
gi|325137799|gb|EGC60374.1| ribosomal RNA large subunit methyltransferase J [Neisseria
meningitidis ES14902]
Length = 206
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++TG++ V A+DIL ME I GV F + DF + D + P DLV+
Sbjct: 64 SQVAAKLTGTSGA---VFALDILPMEAIGGVSFIQGDFRENDVLAQFEGLLNNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + +++ F
Sbjct: 121 CDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 GTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|254230590|ref|ZP_04923953.1| ribosomal RNA large subunit methyltransferase J [Vibrio sp. Ex25]
gi|262393375|ref|YP_003285229.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase E [Vibrio sp. Ex25]
gi|269968318|ref|ZP_06182340.1| cell division protein FtsJ [Vibrio alginolyticus 40B]
gi|151936891|gb|EDN55786.1| ribosomal RNA large subunit methyltransferase J [Vibrio sp. Ex25]
gi|262336969|gb|ACY50764.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase E [Vibrio sp. Ex25]
gi|269827069|gb|EEZ81381.1| cell division protein FtsJ [Vibrio alginolyticus 40B]
Length = 209
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKIDEIQTKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G ++ +++A D+L M+PI GV F + DF D E + +
Sbjct: 61 APGGWSQYAAKIVG---DSGQIIACDLLPMDPIAGVSFLQGDFRDDAVLEALLERIQPSM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQYVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRDMFKAVKIRKPDSSRARSREVFVVATGYK 208
>gi|329889243|ref|ZP_08267586.1| ftsJ-like methyltransferase family protein [Brevundimonas diminuta
ATCC 11568]
gi|328844544|gb|EGF94108.1| ftsJ-like methyltransferase family protein [Brevundimonas diminuta
ATCC 11568]
Length = 240
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 93/229 (40%), Positives = 141/229 (61%), Gaps = 8/229 (3%)
Query: 1 MVKPPGSSS--RRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
MV+ P + R + QK+K SS+ W+ R ++D + RA+ EGWR+R+A+KL++
Sbjct: 17 MVRLPTGGTAAGRKVGQKIKTADKKTLSSQAWIKRQLSDEWSDRARAEGWRSRAAFKLME 76
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I++K ++++ R++DLG++PG W QVA V +D+L +EPI G +
Sbjct: 77 IDDKFRLIKRGSRVIDLGAAPGGWVQVALDR-----GAAAVAGVDLLMIEPIPGATLIQA 131
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DF D + + AIGG PDLVLSDMA+ T+GHR+ DHL+ ++L E A FA+ L GG
Sbjct: 132 DFTDPGVDQQMLDAIGGPPDLVLSDMAHNTVGHRQTDHLKIIALIEIAADFAIRTLRPGG 191
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+F+ K FQGG +L L++ F+ V +VKP +SR S E+FL+A R
Sbjct: 192 NFVSKNFQGGDAGGVLTRLREEFETVKYVKPESSRKGSAEVFLVALNKR 240
>gi|59800827|ref|YP_207539.1| hypothetical protein NGO0383 [Neisseria gonorrhoeae FA 1090]
gi|240013700|ref|ZP_04720613.1| hypothetical protein NgonD_03460 [Neisseria gonorrhoeae DGI18]
gi|240016140|ref|ZP_04722680.1| hypothetical protein NgonFA_03058 [Neisseria gonorrhoeae FA6140]
gi|240117521|ref|ZP_04731583.1| hypothetical protein NgonPID_03526 [Neisseria gonorrhoeae PID1]
gi|240120769|ref|ZP_04733731.1| hypothetical protein NgonPI_03133 [Neisseria gonorrhoeae PID24-1]
gi|268603220|ref|ZP_06137387.1| cell division protein [Neisseria gonorrhoeae PID1]
gi|293399468|ref|ZP_06643621.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae F62]
gi|75356299|sp|Q5F9L0|RLME_NEIG1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|59717722|gb|AAW89127.1| putative methyltranferase involved in cell division [Neisseria
gonorrhoeae FA 1090]
gi|268587351|gb|EEZ52027.1| cell division protein [Neisseria gonorrhoeae PID1]
gi|291610037|gb|EFF39159.1| ribosomal RNA large subunit methyltransferase J [Neisseria
gonorrhoeae F62]
Length = 206
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ HIND YV AQ +G+RAR+AYKLL+INEK +I++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHINDQYVHMAQKDGYRARAAYKLLEINEKDKIIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++TG++ V A+DIL ME I GV F + DF + D + P DLV+
Sbjct: 64 SQVAAKLTGTSGA---VFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + +++ F
Sbjct: 121 CDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 GTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|86148134|ref|ZP_01066433.1| cell division protein FtsJ [Vibrio sp. MED222]
gi|218710452|ref|YP_002418073.1| 23S rRNA methyltransferase J [Vibrio splendidus LGP32]
gi|254809562|sp|B7VJI4|RLME_VIBSL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|85834051|gb|EAQ52210.1| cell division protein FtsJ [Vibrio sp. MED222]
gi|218323471|emb|CAV19648.1| 23S rRNA methylase [Vibrio splendidus LGP32]
Length = 209
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L IVDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKMEEIQTKDKLLTPGMTIVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G N +++A D+L M+PI GV F + DF + + + +
Sbjct: 61 APGGWSQYAAKIIGDN---GQIIACDLLPMDPIAGVSFLQGDFREEAVLDALLERIQPNM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLATNGSFVVKVFQGEGFDQYVKD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VREMFKTVKVRKPDSSRARSREVFIVATGYK 208
>gi|322514378|ref|ZP_08067426.1| ribosomal RNA large subunit methyltransferase J [Actinobacillus
ureae ATCC 25976]
gi|322119729|gb|EFX91773.1| ribosomal RNA large subunit methyltransferase J [Actinobacillus
ureae ATCC 25976]
Length = 208
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R SS WL H D +VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 RKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMIVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
WSQ A GS R++A DILDM PI+GV F + DF + + + +G + D+
Sbjct: 63 GWSQYAVTQIGSK---GRIIACDILDMNPIVGVDFLQGDFREESVLNALLERVGDDMVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG +D L ++
Sbjct: 120 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLAPKGSFVVKVFQGEGFDDYLRDIRA 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 180 MFSTVKVRKPEASRDRSREVYIVATGYK 207
>gi|262376626|ref|ZP_06069854.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
lwoffii SH145]
gi|262308336|gb|EEY89471.1| ribosomal RNA large subunit methyltransferase J [Acinetobacter
lwoffii SH145]
Length = 216
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 138/216 (63%), Gaps = 4/216 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSRDW+ H++DPYV++AQ +G+RAR+AYKLL++ EK++I++ +V
Sbjct: 1 MATRITNQKLSKSSRDWMREHLDDPYVKKAQKDGYRARAAYKLLEMQEKYKIIKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ G ++A DIL M+ + V F + DF + + ++ + + +
Sbjct: 61 DLGAAPGSWSQIAGKLVGDK---GLLIASDILPMDALPDVTFLQGDFREEEVFQQLLEIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G++ +D R + LCE A FA ++L G F+VK FQG ++
Sbjct: 118 DGRIVDVVISDMAPNTSGNKAVDQPRQIYLCELALDFANKVLGPKGQFVVKVFQGSGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + KP+ASRA S E+FL+ +G +K
Sbjct: 178 FRKQVVDSFDVLKTSKPLASRARSKEVFLIGQGRKK 213
>gi|254787193|ref|YP_003074622.1| ribosomal RNA large subunit methyltransferase J [Teredinibacter
turnerae T7901]
gi|237683719|gb|ACR10983.1| ribosomal RNA large subunit methyltransferase J [Teredinibacter
turnerae T7901]
Length = 206
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 79/206 (38%), Positives = 119/206 (57%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL H +D YV+ +Q +G+R+R++YKL++++ K ++ + +VDLG++PG W
Sbjct: 3 RSKSSHRWLREHFSDQYVKASQKDGYRSRASYKLIELDNKDKLFRPGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVA + G +V+A DIL M+ I GV F + DF + E + A+ G DLV+
Sbjct: 63 SQVAVQQIGDK---GQVIASDILPMDSIAGVTFIQGDFTEESVLEELLGAMDGERADLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D ++M L E A A ++L GG F+ K F G +D F
Sbjct: 120 SDMAPNMSGVTAVDQPKSMYLVELALDMAKQVLKPGGTFVCKVFHGEGFDDFFKDCNASF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
K + KP ASRA S E++L+AKG++
Sbjct: 180 SKAVTRKPDASRARSREVYLVAKGYK 205
>gi|114046589|ref|YP_737139.1| 23S rRNA methyltransferase J [Shewanella sp. MR-7]
gi|122944866|sp|Q0HXS3|RLME_SHESR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|113888031|gb|ABI42082.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Shewanella sp. MR-7]
Length = 209
Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS W+ H +D YV+ AQ G R+R+A+KL ++ +K Q+++ +VDLG++PG
Sbjct: 4 KKRTASSNRWMLEHFDDHYVKLAQKRGLRSRAAFKLEELQQKDQLIRPGMTVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDL 138
WSQVA ++ G +V+A DIL M+PI+GV F + DF + E + + D+
Sbjct: 64 GWSQVAVKLAGDK---GKVIACDILPMDPIVGVDFLQGDFREEKVLEALLTRVGADKVDV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G +D R M L E A ++L G F VK FQG ++ + +K+
Sbjct: 121 VLSDMAPNMSGSDGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKE 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SRA S E++L+A G++
Sbjct: 181 AFKVVKTRKPDSSRARSREVYLVATGYK 208
>gi|330830896|ref|YP_004393848.1| ribosomal RNA large subunit methyltransferase E [Aeromonas veronii
B565]
gi|328806032|gb|AEB51231.1| Ribosomal RNA large subunit methyltransferase E [Aeromonas veronii
B565]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV++AQ G R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MTQKKRSPSSTRWLKEHFDDQYVKKAQKMGLRSRAVFKIDEIQGKDRLLKHGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGN 135
+PG WSQ A G ++ RV+A DIL M+PI GV F + DF + + +
Sbjct: 61 APGGWSQFAVEQVG---DSGRVIACDILPMDPIAGVDFLQGDFREETVLGALLERVGPDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +++D R M L E A ++L G F+VK FQG + L
Sbjct: 118 VDVVMSDMAPNMSGTQQVDQARAMYLVELALDMCNQVLRSDGSFVVKVFQGEGFDAYLNE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++K F V KP +SRA S E++++A GF+
Sbjct: 178 IRKLFSAVKIRKPDSSRARSREVYIVATGFK 208
>gi|307252148|ref|ZP_07534047.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860448|gb|EFM92462.1| Cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 208
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R SS WL H D +VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 RKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
WSQ A GS R++A DILDM PI+GV F + DF + + + +G + D+
Sbjct: 63 GWSQYAVTQIGSK---GRIIACDILDMNPIVGVDFLQGDFREESVLNALLERVGDDMVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG ++ L ++
Sbjct: 120 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLAPKGSFVVKVFQGEGFDEYLRDIRA 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 180 MFTAVKVRKPEASRDRSREVYIVATGYK 207
>gi|15640656|ref|NP_230285.1| 23S rRNA methyltransferase J [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121730106|ref|ZP_01682507.1| cell division protein FtsJ [Vibrio cholerae V52]
gi|147673945|ref|YP_001216130.1| 23S rRNA methyltransferase J [Vibrio cholerae O395]
gi|153820567|ref|ZP_01973234.1| cell division protein FtsJ [Vibrio cholerae NCTC 8457]
gi|153830952|ref|ZP_01983619.1| cell division protein FtsJ [Vibrio cholerae 623-39]
gi|227080817|ref|YP_002809368.1| cell division protein FtsJ [Vibrio cholerae M66-2]
gi|254850870|ref|ZP_05240220.1| cell division protein FtsJ [Vibrio cholerae MO10]
gi|255744147|ref|ZP_05418100.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholera CIRS 101]
gi|262155721|ref|ZP_06028845.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae INDRE 91/1]
gi|262189675|ref|ZP_06048049.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae CT 5369-93]
gi|297580762|ref|ZP_06942688.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
RC385]
gi|298500752|ref|ZP_07010555.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
MAK 757]
gi|81545365|sp|Q9KU87|RLME_VIBCH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040344|sp|A5F937|RLME_VIBC3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809561|sp|C3LSP1|RLME_VIBCM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|9655071|gb|AAF93802.1| cell division protein FtsJ [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121628141|gb|EAX60673.1| cell division protein FtsJ [Vibrio cholerae V52]
gi|126508889|gb|EAZ71483.1| cell division protein FtsJ [Vibrio cholerae NCTC 8457]
gi|146315828|gb|ABQ20367.1| cell division protein FtsJ [Vibrio cholerae O395]
gi|148873565|gb|EDL71700.1| cell division protein FtsJ [Vibrio cholerae 623-39]
gi|227008705|gb|ACP04917.1| cell division protein FtsJ [Vibrio cholerae M66-2]
gi|227012461|gb|ACP08671.1| cell division protein FtsJ [Vibrio cholerae O395]
gi|254846575|gb|EET24989.1| cell division protein FtsJ [Vibrio cholerae MO10]
gi|255738087|gb|EET93479.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholera CIRS 101]
gi|262030432|gb|EEY49072.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae INDRE 91/1]
gi|262034441|gb|EEY52807.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio cholerae CT 5369-93]
gi|297535178|gb|EFH74013.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
RC385]
gi|297540533|gb|EFH76591.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
MAK 757]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV A+ +G+R+R+ +K+ +I K ++L++ +VDLG+
Sbjct: 1 MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA++ G RV+A D+L ME I GV F + DF + + +
Sbjct: 61 APGGWSQFAAKVVGEG---GRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG +D +
Sbjct: 118 VDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR+ S E+F++A G++
Sbjct: 178 VRDLFKVVKIRKPDSSRSRSREVFIVATGYK 208
>gi|261856557|ref|YP_003263840.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halothiobacillus
neapolitanus c2]
gi|261837026|gb|ACX96793.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halothiobacillus
neapolitanus c2]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL H D +V RA+ EG+R+R+ YKL+++NE+ + L+ +R+VDLG++PG W
Sbjct: 3 RSNSSQRWLAEHFRDEFVLRAKREGYRSRAVYKLMELNERDRFLKPGQRVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVL 140
+Q AA++ G + + A+D+L M+ + DF + DLV+
Sbjct: 63 TQYAAQVVG---DRGHIFALDLLPMDHFAHTTVIQGDFSSEEVLAHLTALLGDAPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M L E A F ML G F+ K FQG + ++ + F
Sbjct: 120 SDMAPNMSGVETVDIPRAMYLAELALDFCHHMLKPEGAFVTKVFQGEGFDALMKNARSAF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+ V+ KP ASR S E++L+A+G R
Sbjct: 180 KSVVVRKPKASRPRSREVYLVARGKR 205
>gi|28899238|ref|NP_798843.1| 23S rRNA methyltransferase J [Vibrio parahaemolyticus RIMD 2210633]
gi|260879068|ref|ZP_05891423.1| ribosomal RNA large subunit methyltransferase J [Vibrio
parahaemolyticus AN-5034]
gi|260896885|ref|ZP_05905381.1| ribosomal RNA large subunit methyltransferase J [Vibrio
parahaemolyticus Peru-466]
gi|81727000|sp|Q87LZ4|RLME_VIBPA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|28807462|dbj|BAC60727.1| cell division protein FtsJ [Vibrio parahaemolyticus RIMD 2210633]
gi|308086279|gb|EFO35974.1| ribosomal RNA large subunit methyltransferase J [Vibrio
parahaemolyticus Peru-466]
gi|308089606|gb|EFO39301.1| ribosomal RNA large subunit methyltransferase J [Vibrio
parahaemolyticus AN-5034]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKIDEIQTKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ AA+I G ++ +++A D+L M+PI GV F + DF D E + I
Sbjct: 61 APGGWSQYAAKIVG---DSGQIIACDLLPMDPIAGVSFLQGDFRDDAVLEALLDRIQPLM 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQYVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRDMFKVVKIRKPDSSRARSREVFVVATGYK 208
>gi|15599946|ref|NP_253440.1| cell division protein FtsJ [Pseudomonas aeruginosa PAO1]
gi|116052899|ref|YP_793216.1| cell division protein FtsJ [Pseudomonas aeruginosa UCBPP-PA14]
gi|218893847|ref|YP_002442716.1| cell division protein FtsJ [Pseudomonas aeruginosa LESB58]
gi|313109733|ref|ZP_07795673.1| cell division protein FtsJ [Pseudomonas aeruginosa 39016]
gi|12230965|sp|P95454|RLME_PSEAE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|122257090|sp|Q02FS0|RLME_PSEAB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705300|sp|B7V1G4|RLME_PSEA8 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|9951015|gb|AAG08138.1|AE004889_1 cell division protein FtsJ [Pseudomonas aeruginosa PAO1]
gi|115588120|gb|ABJ14135.1| cell division protein FtsJ [Pseudomonas aeruginosa UCBPP-PA14]
gi|218774075|emb|CAW29891.1| cell division protein FtsJ [Pseudomonas aeruginosa LESB58]
gi|310882175|gb|EFQ40769.1| cell division protein FtsJ [Pseudomonas aeruginosa 39016]
Length = 207
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S+ WL H +DPYV+ AQ +G+R+R++YKLL+I EK +IL+ +VDLG++PG W
Sbjct: 3 RSKTSQRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G + R++A DIL+M+ I V F + DF + + I +AIG +P DLV+
Sbjct: 63 SQVTSRVIG---DRGRLIASDILEMDSIPDVTFIQGDFTEDAVFARILEAIGDHPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G R D R M LCE A A +L GGDFL+K FQG + ++ F
Sbjct: 120 SDMAPNMSGVRAADQPRAMYLCELALDLAGRVLRPGGDFLIKIFQGEGFDQYHKQAREMF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP++SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPLSSRDRSREQYLLARGFR 205
>gi|237808997|ref|YP_002893437.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Tolumonas auensis DSM
9187]
gi|259494571|sp|C4L8Y1|RLME_TOLAT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|237501258|gb|ACQ93851.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Tolumonas auensis DSM
9187]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +K+ +I +K ++++ +VDLG+
Sbjct: 1 MSKKKRTASSTRWLKEHFDDKYVQQAQKQGLRSRAVFKIDEIQQKDKLIKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGN 135
+PG WSQ G + RV+A DIL M+PI GV F + DF + + +
Sbjct: 61 APGGWSQFCVEQVGP---HGRVIACDILPMDPIAGVDFLQGDFREEAVLSALLGRVGEQK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D++LSDMA G +D R+M L E A ++L G F+VK FQG + L
Sbjct: 118 VDIILSDMAPNMSGTPAVDQPRSMYLVELALEMCKQVLAAKGSFVVKVFQGAGFEEYLKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP +SR+ S E++++A GF+
Sbjct: 178 VRSLFSVVKIRKPDSSRSRSREVYIVATGFK 208
>gi|82778493|ref|YP_404842.1| 23S rRNA methyltransferase J [Shigella dysenteriae Sd197]
gi|309785507|ref|ZP_07680138.1| ribosomal RNA large subunit methyltransferase J [Shigella
dysenteriae 1617]
gi|123561519|sp|Q32BF4|RLME_SHIDS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|81242641|gb|ABB63351.1| cell division protein [Shigella dysenteriae Sd197]
gi|308926627|gb|EFP72103.1| ribosomal RNA large subunit methyltransferase J [Shigella
dysenteriae 1617]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L +GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLALGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|238910090|ref|ZP_04653927.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
Length = 208
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ ++ +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKAGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L
Sbjct: 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP +SRA S E++++A G +
Sbjct: 178 IRSLFTKVKVRKPDSSRARSREVYIVATGRK 208
>gi|293390043|ref|ZP_06634377.1| ribosomal RNA large subunit methyltransferase J [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290950577|gb|EFE00696.1| ribosomal RNA large subunit methyltransferase J [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSTRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G N R++A D+L+M+PI+GV F + DF D + + + + G
Sbjct: 61 APGGWSQYVVSQIGRN---GRIIACDLLEMDPIVGVDFLQGDFRDENVLNILLERVGEGK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQILANKGSFVVKVFQGEGFDEYLKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFSIVKVRKPEASRDRSREVYIVASGYK 208
>gi|197334812|ref|YP_002155234.1| ribosomal RNA large subunit methyltransferase J [Vibrio fischeri
MJ11]
gi|226705320|sp|B5FA72|RLME_VIBFM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|197316302|gb|ACH65749.1| ribosomal RNA large subunit methyltransferase J [Vibrio fischeri
MJ11]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ SS WL H +D YV AQ G+R+R+ +K+ +I K ++L+S +VDLG+
Sbjct: 1 MSKNKVSASSGRWLKEHFDDKYVLEAQKRGYRSRAIFKIEEIQNKDKLLKSGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ A G + +V+A DIL M+ I GV F + DF + + + +
Sbjct: 61 APGGWSQYAVEQVG---DEGQVIACDILPMDSIAGVSFLQGDFREEAVLDALLERIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F VK FQG + L
Sbjct: 118 VDVVMSDMAPNMSGNLAVDQPRAMYLVELALDMCRQVLAPNGSFTVKVFQGEGFDQYLQE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E++++A G++
Sbjct: 178 VRNMFKVVKIRKPDSSRARSREVYIVATGYK 208
>gi|328474227|gb|EGF45032.1| 23S rRNA methyltransferase J [Vibrio parahaemolyticus 10329]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKIDEIQTKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G ++ +++A D+L M+PI GV F + DF D E + +
Sbjct: 61 APGGWSQYAAKIVG---DSGQIIACDLLPMDPIAGVSFLQGDFRDDAVLEALLDRIQPSM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQYVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRDMFKVVKIRKPDSSRARSREVFVVATGYK 208
>gi|296391579|ref|ZP_06881054.1| cell division protein FtsJ [Pseudomonas aeruginosa PAb1]
Length = 207
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S+ WL H +DPYV+ AQ +G+R+R++YKLL+I EK +IL+ +VDLG++PG W
Sbjct: 3 RSKTSQRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G + R++A DIL+M+ I V F + DF + + I +AIG +P DLV+
Sbjct: 63 SQVTSRVIG---DRGRLIASDILEMDSIPDVTFIQGDFTEDAVFARILEAIGDHPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G R D R M LCE A A +L GGDFL+K FQG + ++ F
Sbjct: 120 SDMAPNMSGVRAADQPRAMYLCELALDLARRVLRPGGDFLIKIFQGEGFDQYHKQAREMF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP++SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPLSSRDRSREQYLLARGFR 205
>gi|300718585|ref|YP_003743388.1| ribosomal RNA large subunit methyltransferase [Erwinia billingiae
Eb661]
gi|299064421|emb|CAX61541.1| Ribosomal RNA large subunit methyltransferase [Erwinia billingiae
Eb661]
Length = 209
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQQGDKLFKLGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ GS RV+ DIL M+PI GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGSK---GRVIGCDILPMDPIAGVDFLQGDFRDELVMKALLERVGDNK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
+V+SDMA G +D R M L E A ++L GG FLVK FQG D L
Sbjct: 118 VQVVMSDMAPNMTGTPAVDIPRAMYLVELALEMCRDVLAPGGSFLVKVFQGDGFEDYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR+ S E++++A G +
Sbjct: 178 IRSLFTKVKIRKPDASRSRSREVYIVATGRK 208
>gi|261250304|ref|ZP_05942880.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase E [Vibrio orientalis CIP 102891]
gi|260939420|gb|EEX95406.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase E [Vibrio orientalis CIP 102891]
Length = 209
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKIEEIQTKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G +++A D+L M+PI GV F + DF D E +++
Sbjct: 61 APGGWSQYAAKIIGEE---GQIIACDLLPMDPIAGVSFLQGDFRDDAVLEALLKRIQPSM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQFVKD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 IRDMFKVVKIRKPDSSRARSREVFVVATGYK 208
>gi|291613528|ref|YP_003523685.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sideroxydans
lithotrophicus ES-1]
gi|291583640|gb|ADE11298.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sideroxydans
lithotrophicus ES-1]
Length = 206
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ W+ H+NDPYVQ+AQ +G+R+R+AYKLL+I+E+ +++ +VDLG++PG
Sbjct: 2 KASKTSKQWMREHVNDPYVQQAQKDGYRSRAAYKLLEIDERDHLIKPGMVVVDLGATPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
W QV A G+N R++A+D+L + P+ V+F + DF + + + + G LV
Sbjct: 62 WCQVVANRLGAN---GRIIALDLLPLNPLPRVEFIQGDFREDSVLAQLEEKLEGRQIGLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G D R M L E A FA+E L GG FLVK FQG D L L++ +
Sbjct: 119 ISDMAPNISGVSSADQARAMHLAELALDFAVEHLAPGGSFLVKVFQGVGFEDYLKLMRSN 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F KV+ KP ASR S E +L+ G
Sbjct: 179 FAKVVARKPKASRDRSSEQYLVGLGK 204
>gi|254238512|ref|ZP_04931835.1| cell division protein FtsJ [Pseudomonas aeruginosa C3719]
gi|254244346|ref|ZP_04937668.1| cell division protein FtsJ [Pseudomonas aeruginosa 2192]
gi|126170443|gb|EAZ55954.1| cell division protein FtsJ [Pseudomonas aeruginosa C3719]
gi|126197724|gb|EAZ61787.1| cell division protein FtsJ [Pseudomonas aeruginosa 2192]
Length = 207
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S+ WL H +DPYV+ AQ +G+R+R++YKLL+I EK +IL+ +VDLG++PG W
Sbjct: 3 RSKTSQRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G + R++A DIL+M+ I V F + DF + + I +AIG +P DLV+
Sbjct: 63 SQVTSRVIG---DRGRLIASDILEMDSIPDVTFIQGDFTEDAVFARILEAIGDHPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G R D R M LCE A A +L GGDFL+K FQG + ++ F
Sbjct: 120 SDMAPNMSGVRASDQPRAMYLCELALDLAGRVLRPGGDFLIKIFQGEGFDQYHKQAREMF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP++SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPLSSRDRSREQYLLARGFR 205
>gi|152985989|ref|YP_001350794.1| cell division protein FtsJ [Pseudomonas aeruginosa PA7]
gi|189040320|sp|A6VCK9|RLME_PSEA7 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150961147|gb|ABR83172.1| cell division protein FtsJ [Pseudomonas aeruginosa PA7]
Length = 207
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S+ WL H +DPYV+ AQ +G+R+R++YKLL+I EK +IL+ +VDLG++PG W
Sbjct: 3 RSKTSQRWLKEHFDDPYVKMAQRDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G + R++A DIL+M+ I V F + DF + + I +AIG +P DLV+
Sbjct: 63 SQVTSRVIG---DRGRLIASDILEMDSIPDVTFIQGDFTEDAVFARILEAIGEHPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G R D R M LCE A A +L GGDFL+K FQG + ++ F
Sbjct: 120 SDMAPNMSGVRAADQPRAMYLCELALDLAGRVLRPGGDFLIKIFQGEGFDQYHKQAREMF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP++SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPLSSRDRSREQYLLARGFR 205
>gi|224823864|ref|ZP_03696973.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Lutiella nitroferrum
2002]
gi|224604319|gb|EEG10493.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Lutiella nitroferrum
2002]
Length = 205
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS DWL H++D YV AQ +G+RAR+AYKLL+IN+K ++++ + DLGS+PGSW
Sbjct: 3 RSKSSNDWLREHVHDHYVHMAQKDGYRARAAYKLLEINDKDKLIRPGTVLADLGSAPGSW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAAR+ G +V A+DIL M PI V+F + DF + + + +GG DLV+
Sbjct: 63 SQVAARLVGDK---GKVYALDILPMNPIADVEFIQGDFREQEVLDQFVALLGGRELDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G ID R+ LCE A F + L GG FLVK FQG L +++ F
Sbjct: 120 SDMAPNISGMSAIDQARSFHLCELALEFVRDHLKPGGSFLVKVFQGSDFQPYLKSMRELF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+V+ KP ASR S E++LL KG R
Sbjct: 180 DEVVSRKPKASRDRSTEIYLLGKGRR 205
>gi|126664481|ref|ZP_01735465.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter sp. ELB17]
gi|126630807|gb|EBA01421.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter sp. ELB17]
Length = 206
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL H+NDP+V++AQ++G+R+RS+YKLL+IN K +++Q ++DLGS+PG W
Sbjct: 3 RSKSSNRWLEEHVNDPFVKKAQMDGYRSRSSYKLLEINAKDKLIQPTMTVMDLGSAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNPDLVL 140
SQVA + G RV+A DIL M+ + GV+F + DF + +E I D+V+
Sbjct: 63 SQVATDLVGHK---GRVIASDILPMDAVAGVEFIQGDFTENAVFEEIMAVLRDAKVDVVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G D +M L E A A ++L G F+ K F GG + + +++ F
Sbjct: 120 SDMAPNISGVNAADQAASMYLIELALDMASQVLKPKGSFVAKVFHGGGYDGYVKAVREQF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV+ KP +SRA S E++L+ KGFR
Sbjct: 180 DKVVVRKPDSSRARSREVYLVGKGFR 205
>gi|254482484|ref|ZP_05095723.1| ribosomal RNA large subunit methyltransferase J [marine gamma
proteobacterium HTCC2148]
gi|214037175|gb|EEB77843.1| ribosomal RNA large subunit methyltransferase J [marine gamma
proteobacterium HTCC2148]
Length = 208
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 125/207 (60%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WL H +D +VQ+A+ +G+R+R+ YKLL++ +K +++ +VDLGS+PG
Sbjct: 3 KKKSSSKAWLKEHHDDLFVQQAKRDGYRSRACYKLLELQDKDHLMKPGMTVVDLGSAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WSQV+A + G RVVA DIL M+ + V+F + DF + +E I QAI G DLV
Sbjct: 63 WSQVSADLVGHK---GRVVASDILHMDNLADVEFIQGDFTEDAVFERILQAIDGESVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D +M L E A A +L+ GG F+ K FQG +++ +
Sbjct: 120 VSDMAPNMSGVAAVDQPGSMYLVELALDMARRVLSPGGSFVTKVFQGEGFDELFRDTRDS 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV+ KP ASR S E++L+A GF+
Sbjct: 180 FDKVLTRKPKASRPRSREVYLVASGFK 206
>gi|319763183|ref|YP_004127120.1| ribosomal RNA methyltransferase rrmj/ftsj [Alicycliphilus
denitrificans BC]
gi|330825246|ref|YP_004388549.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Alicycliphilus
denitrificans K601]
gi|317117744|gb|ADV00233.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Alicycliphilus
denitrificans BC]
gi|329310618|gb|AEB85033.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Alicycliphilus
denitrificans K601]
Length = 220
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 127/218 (58%), Gaps = 7/218 (3%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
KVK +S + + + WLN H+ND YV+ AQ EG+RAR+AYKL +I+E+ +++ +VDL
Sbjct: 1 MKVKTKSKKVN-KAWLNDHVNDTYVKLAQKEGYRARAAYKLKEIDEQFGLIKPGHVVVDL 59
Query: 75 GSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
GSSPG+WSQ R + ++++DIL MEPI GV F + DF D + ++
Sbjct: 60 GSSPGAWSQYVRRRLSPGGAAMGQLDGTIISLDILPMEPIEGVTFLQGDFRDEEVLARLQ 119
Query: 130 QAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
QA+ G P D+V+SDMA G +D +R L E A FA+ L G +VK F G
Sbjct: 120 QAVQGRPVDVVVSDMAPNLSGVESVDAVRIAHLIELAVDFAVHHLKPDGALVVKLFHGSG 179
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ L K F+ V VKP ASR +S E FL+ G +
Sbjct: 180 YTQLVQLFKDTFRVVKPVKPKASRDKSSETFLVGIGLK 217
>gi|298368448|ref|ZP_06979766.1| ribosomal RNA large subunit methyltransferase J [Neisseria sp. oral
taxon 014 str. F0314]
gi|298282451|gb|EFI23938.1| ribosomal RNA large subunit methyltransferase J [Neisseria sp. oral
taxon 014 str. F0314]
Length = 206
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 90/205 (43%), Positives = 123/205 (60%), Gaps = 4/205 (1%)
Query: 23 QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWS 82
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSWS
Sbjct: 5 SKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKRGTVLADLGSAPGSWS 64
Query: 83 QVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
QVAA++ G ++ +V A+DIL M+ I GV F + DF + D + G P DLV+
Sbjct: 65 QVAAKLVG---DSGKVFALDILPMDEIEGVSFIQGDFREDDVLARFESLLAGRPLDLVIC 121
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
DMA G+ D R+ LCE A FA L GG+FLVK FQG + ++ F
Sbjct: 122 DMAPNMSGNAVTDQARSYYLCELALDFAANHLKTGGNFLVKVFQGAGFQEYTAAMRAVFS 181
Query: 202 KVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL + R
Sbjct: 182 TVQTRKPEASRNRSSEIYLLGRNKR 206
>gi|33152554|ref|NP_873907.1| 23S rRNA methyltransferase J [Haemophilus ducreyi 35000HP]
gi|81423348|sp|Q7VLF2|RLME_HAEDU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|33148778|gb|AAP96296.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
ducreyi 35000HP]
Length = 208
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS WL H D +VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 KKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQSDRLFRPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
WSQ A G N R++A DILDM PI+GV F + DF ++ + +G D+
Sbjct: 63 GWSQYAVTQIG---NQGRIIACDILDMNPIVGVDFLQGDFREVSVLNALLARVGDEMVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG +D L ++
Sbjct: 120 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLAPKGSFVVKVFQGEGFDDYLRDIRS 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 180 MFTTVKVRKPEASRDRSREVYIVATGYK 207
>gi|28871632|ref|NP_794251.1| FtsJ cell division protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213966655|ref|ZP_03394806.1| FtsJ cell division protein [Pseudomonas syringae pv. tomato T1]
gi|301383165|ref|ZP_07231583.1| FtsJ cell division protein [Pseudomonas syringae pv. tomato Max13]
gi|302063400|ref|ZP_07254941.1| FtsJ cell division protein [Pseudomonas syringae pv. tomato K40]
gi|302133773|ref|ZP_07259763.1| FtsJ cell division protein [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|81729678|sp|Q87WP7|RLME_PSESM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|28854884|gb|AAO57946.1| FtsJ cell division protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213928505|gb|EEB62049.1| FtsJ cell division protein [Pseudomonas syringae pv. tomato T1]
gi|330877241|gb|EGH11390.1| FtsJ cell division protein [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|331016640|gb|EGH96696.1| FtsJ cell division protein [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 216
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S +WL H +D YV+ AQ +G+R+R++YKLL+I EK +I++ ++DLG++PG W
Sbjct: 3 RSKTSHNWLKEHFDDKYVKMAQKDGYRSRASYKLLEIQEKDKIIRPGMTVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + E I +A+G DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDAILEQILEAVGNTQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + ++K F
Sbjct: 120 SDMAPNMSGLSAVDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGFDIYHKDIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPSSSRDRSREQYLLARGFR 205
>gi|117618251|ref|YP_857802.1| ribosomal RNA large subunit methyltransferase J [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|143459211|sp|A0KNF1|RLME_AERHH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|117559658|gb|ABK36606.1| ribosomal RNA large subunit methyltransferase J [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 209
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV++AQ G R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MTQKKHSPSSTRWLKEHFDDQYVKKAQKLGLRSRAVFKIDEIQGKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGN 135
+PG WSQ A G RV+A DIL M+ I GV F + DF + + +
Sbjct: 61 APGGWSQFAIDQVGDK---GRVIACDILPMDSIAGVDFLQGDFREETVLGALLERVGPDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +++D R+M L E A ++L G F+VK FQG + L
Sbjct: 118 VDVVMSDMAPNMSGTQQVDQARSMYLVELALDMCNQVLRANGSFVVKVFQGEGFDIYLNE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++K F V KP +SRA S E++++A GF+
Sbjct: 178 IRKLFTAVKIRKPDSSRARSREVYIVATGFK 208
>gi|121594725|ref|YP_986621.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax sp. JS42]
gi|120606805|gb|ABM42545.1| 23S rRNA Um-2552 2'-O-methyltransferase [Acidovorax sp. JS42]
Length = 237
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 126/229 (55%), Gaps = 7/229 (3%)
Query: 5 PGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQI 64
P R L+ K + +S + + + WL+ H+ND YV+ AQ EG+RAR+AYKL +I+E+ +
Sbjct: 8 PDPGRRTDLSMKAQTKSKKVN-KAWLHDHVNDTYVKLAQKEGYRARAAYKLKEIDEQLGL 66
Query: 65 LQSNRRIVDLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDF 119
++ +VDLGSSPG+WSQ R + N ++A+DIL MEPI GV F + DF
Sbjct: 67 IKPGHVVVDLGSSPGAWSQYVRRRLSPDGAAVGQLNGVIIALDILPMEPIEGVTFLQGDF 126
Query: 120 LDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
+ + D+V+SDMA G +D +R L E A FA+ L G
Sbjct: 127 REEEVLAGLQEAVQARPVDVVVSDMAPNLSGVESVDAVRIAHLIELAVDFAVHHLKPEGA 186
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+VK F G + ++ L K F+ V +KP ASR +S E FL+ G ++
Sbjct: 187 LVVKLFHGSGYSQLVQLFKDTFRVVKPMKPKASRDKSSETFLVGMGLKR 235
>gi|152979125|ref|YP_001344754.1| 23S rRNA methyltransferase J [Actinobacillus succinogenes 130Z]
gi|226703280|sp|A6VPC2|RLME_ACTSZ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150840848|gb|ABR74819.1| ribosomal RNA large subunit methyltransferase J [Actinobacillus
succinogenes 130Z]
Length = 208
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 117/208 (56%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 RKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDL 138
WSQ A GS R++A DIL+M+PI+GV F + DF D + + + + D+
Sbjct: 63 GWSQYAVTQIGSK---GRIIACDILEMDPIVGVDFLQGDFRDENVLAALLERVGESKVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG ++ L ++
Sbjct: 120 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLTANGSFVVKVFQGEGFDEYLREIRS 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP ASR S E++++A G++
Sbjct: 180 LFKVVKVRKPEASRGRSREVYIVAIGYK 207
>gi|225075313|ref|ZP_03718512.1| hypothetical protein NEIFLAOT_00316 [Neisseria flavescens
NRL30031/H210]
gi|224953488|gb|EEG34697.1| hypothetical protein NEIFLAOT_00316 [Neisseria flavescens
NRL30031/H210]
Length = 206
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 119/206 (57%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+IN+K ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINQKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++ G V A+DIL M+ I GV F + DF + E + P DLV+
Sbjct: 64 SQVAAKLVG---KTGAVFALDILPMDAIEGVSFIQGDFREDAVLEQFEALLDNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + + F
Sbjct: 121 CDMAPNMSGNAVTDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYTATMHEIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 ASVQTRKPDASRNRSSEIYLLGKNKR 206
>gi|156975670|ref|YP_001446577.1| 23S rRNA methyltransferase J [Vibrio harveyi ATCC BAA-1116]
gi|269961973|ref|ZP_06176328.1| cell division protein FtsJ [Vibrio harveyi 1DA3]
gi|189040345|sp|A7MZH4|RLME_VIBHB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|156527264|gb|ABU72350.1| hypothetical protein VIBHAR_03405 [Vibrio harveyi ATCC BAA-1116]
gi|269833296|gb|EEZ87400.1| cell division protein FtsJ [Vibrio harveyi 1DA3]
Length = 209
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+S +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKIEEIQTKDKLLKSGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGN 135
+PG WSQ AA+I G +++A D+L M+PI GV F + DF D + + +
Sbjct: 61 APGGWSQYAAKIIGEE---GQIIACDLLPMDPIAGVSFLQGDFRDEAVLDALLERIQPSM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQFVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRDMFKVVKIRKPDSSRARSREVFVVATGYK 208
>gi|237798555|ref|ZP_04587016.1| FtsJ cell division protein [Pseudomonas syringae pv. oryzae str.
1_6]
gi|330958057|gb|EGH58317.1| FtsJ cell division protein [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|331021408|gb|EGI01465.1| FtsJ cell division protein [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 216
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S +WL H +D YV+ AQ +G+R+R++YKLL+I EK +I++ ++DLG++PG W
Sbjct: 3 RSKTSHNWLKEHFDDKYVKMAQKDGYRSRASYKLLEIQEKDKIIRPGMTVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + E I +A+G DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDAILEQILEAVGNTQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + ++K F
Sbjct: 120 SDMAPNMSGLSAVDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGFDVYHKDIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPSSSRDRSREQYLLARGFR 205
>gi|260775431|ref|ZP_05884328.1| cell division protein FtsJ [Vibrio coralliilyticus ATCC BAA-450]
gi|260608612|gb|EEX34777.1| cell division protein FtsJ [Vibrio coralliilyticus ATCC BAA-450]
Length = 209
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D + A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKFANEARKKGYRSRAYFKMEEIQTKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G + +++A D+L M+PI GV F + DF + E + +
Sbjct: 61 APGGWSQYAAKIVG---DEGKIIACDLLPMDPIAGVSFLQGDFREDAVLEALLDRIQPSM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
++V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VNVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQYVKD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRDMFKVVKIRKPDSSRARSREVFIVATGYK 208
>gi|189040698|sp|A5IHX0|RLME_LEGPC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
Length = 206
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H +D YV++AQ EG+R+R+ YKL +I++K +++ +VDLG++PG
Sbjct: 2 SRTKSSKRWLQEHFDDVYVKKAQAEGYRSRAVYKLKEIDDKESLIKPGMTVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
W+Q A+ + R+VA+DIL M+ + V+F DF + + + + I DL+
Sbjct: 62 WTQYASEKMKGS---GRLVALDILPMDALPNVEFILGDFREDNVLQELINLIPQRTLDLL 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G ID R M L E A FA +ML GG+ LVK F G ++++ +
Sbjct: 119 LSDMAPNMSGSSAIDIPRAMYLVELAFDFAEKMLKPGGNMLVKIFHGSGFDELVKQARAS 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KV+ KP ASR+ S E +LLAKG+
Sbjct: 179 FEKVVIRKPSASRSRSKETYLLAKGY 204
>gi|91788714|ref|YP_549666.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Polaromonas sp. JS666]
gi|123059751|sp|Q129M4|RLME_POLSJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91697939|gb|ABE44768.1| 23S rRNA Um-2552 2'-O-methyltransferase [Polaromonas sp. JS666]
Length = 247
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 88/238 (36%), Positives = 131/238 (55%), Gaps = 11/238 (4%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSC-QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M P +S + L K + + ++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+
Sbjct: 1 MKVNPKNSPKDNLKDSPKVSARGKKVNKAWLHDHINDPYVKLAQKEGYRARAAYKLKEID 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKF 114
E +++ +VDLGS+PG+WSQ R N R++ +D+L MEPI GV F
Sbjct: 61 ETLGLIKPGDCVVDLGSTPGAWSQYVRRKLSPTGAAAGELNGRIIGLDMLPMEPIEGVAF 120
Query: 115 FKFDFLDLDSWEFIRQAIGGNP-----DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
+ DF + + + + QA+ + DLV+SDMA G D R + L E A FA
Sbjct: 121 IQGDFREPEVLQKLEQALATDKGQVKVDLVISDMAPNLSGIESADAARIVHLVELAVEFA 180
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ G +VK F G ++++ L + F+ V +KP ASR+ S E FL+ KG +K
Sbjct: 181 QNRMKPDGTLVVKLFHGSGYDELVKLFRATFKVVKPMKPKASRSNSSETFLVGKGLKK 238
>gi|240112494|ref|ZP_04726984.1| putative cell division protein [Neisseria gonorrhoeae MS11]
gi|268598561|ref|ZP_06132728.1| cell division protein FtsJ [Neisseria gonorrhoeae MS11]
gi|268582692|gb|EEZ47368.1| cell division protein FtsJ [Neisseria gonorrhoeae MS11]
Length = 206
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 93/206 (45%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ HIND YV AQ +G+RAR+ YKLL+INEK +I++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHINDHYVHMAQKDGYRARATYKLLEINEKDKIIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++TG++ V A+DIL ME I GV F + DF + D + P DLV+
Sbjct: 64 SQVAAKLTGTSGT---VFALDILPMEAIGGVSFIQGDFRENDVLAQFETLLDNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + +++ F
Sbjct: 121 CDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 GTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|119477411|ref|ZP_01617602.1| ribosomal RNA large subunit methyltransferase J [marine gamma
proteobacterium HTCC2143]
gi|119449337|gb|EAW30576.1| ribosomal RNA large subunit methyltransferase J [marine gamma
proteobacterium HTCC2143]
Length = 207
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 87/208 (41%), Positives = 128/208 (61%), Gaps = 4/208 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ WL H +D YVQRAQ EG+R+R+ YKLL++NEK +++++ ++DLGS+PG
Sbjct: 3 KKGNTSKGWLKEHFDDSYVQRAQREGYRSRACYKLLELNEKDKLIKAGMTVIDLGSAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVAA + G RV+A DIL M+ + GV F + DF D ++ I + + G DLV
Sbjct: 63 WSQVAAELVGDK---GRVIASDILKMDNLAGVDFIQGDFTDQPVFDSIMEMLDGKEVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G ID ++M L E A A ++L GG+F+ K FQG + +L ++
Sbjct: 120 ISDMAPNMSGMAAIDQPQSMYLVELALDMARQVLRPGGNFVAKVFQGEGFDQLLQDMRIS 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F V KP ASRA S E++ L +GF++
Sbjct: 180 FNSVQSRKPAASRARSREVYQLGRGFKR 207
>gi|146308631|ref|YP_001189096.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas mendocina
ymp]
gi|189040321|sp|A4XYE8|RLME_PSEMY RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|145576832|gb|ABP86364.1| 23S rRNA Um-2552 2'-O-methyltransferase [Pseudomonas mendocina ymp]
Length = 207
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 91/206 (44%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S+ WL H +DPYV+ AQ +G+R+R++YKLL+I EK +IL+ +VDLG++PG W
Sbjct: 3 RSKTSQRWLKEHFDDPYVKMAQKDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF D + I +AI DLV+
Sbjct: 63 SQVTSRVIGDK---GRLIASDILEMDSIPDVTFIQGDFTDDAVFARILEAIGENPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G R D R M LCE A A +L GGDFL+K FQG + ++ F
Sbjct: 120 SDMAPNMSGVRAADQPRAMYLCELALDLAGRVLRPGGDFLIKIFQGEGFDTYHRQVRDSF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP++SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPLSSRDRSREQYLLARGFR 205
>gi|313668721|ref|YP_004049005.1| cell division protein [Neisseria lactamica ST-640]
gi|309379377|emb|CBX21944.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313006183|emb|CBN87645.1| putative cell division protein [Neisseria lactamica 020-06]
Length = 206
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 91/206 (44%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++TG++ V A+DIL ME + GV F + DF + D + P DLV+
Sbjct: 64 SQVAAKLTGTSGA---VFALDILPMEAVNGVSFIQGDFRENDVLAQFEGLLNNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R+ LCE A FA + L GG FLVK FQG + + +++ F
Sbjct: 121 CDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 GTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|260913935|ref|ZP_05920409.1| ribosomal RNA large subunit methyltransferase J [Pasteurella
dagmatis ATCC 43325]
gi|260632022|gb|EEX50199.1| ribosomal RNA large subunit methyltransferase J [Pasteurella
dagmatis ATCC 43325]
Length = 209
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + + + G
Sbjct: 61 APGGWSQYVVSQIGDK---GRVIACDILEMDPIVGVDFLQGDFRDENVLATLLERVGEGK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLATKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFSVVKVRKPEASRDRSREVYIVATGYK 208
>gi|304413876|ref|ZP_07395293.1| 23S rRNA methylase [Candidatus Regiella insecticola LSR1]
gi|304283596|gb|EFL91991.1| 23S rRNA methylase [Candidatus Regiella insecticola LSR1]
Length = 213
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 115/215 (53%), Gaps = 4/215 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ + N+ SS WL H +D YV +AQ +G R+R+ +KL +I ++ + +V
Sbjct: 1 MENSMANKKRSASSSRWLQEHFSDKYVLQAQKKGLRSRAWFKLDEIQRSDKLFKLGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PG WSQ A G RVVA DIL M+PI+GV F + +F D + + +
Sbjct: 61 DLGAAPGGWSQYAVSQVGEK---GRVVACDILPMDPIVGVDFLQGNFCDESILNALLERV 117
Query: 133 -GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+V+SDMA G +ID R M L E A +L GG FLVK QG ++
Sbjct: 118 GDKKVQVVMSDMAPNMSGTPEIDIPRAMYLVELALDMCRSILAPGGGFLVKVLQGSGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L ++ F KV KP ASRA S E++++A G +
Sbjct: 178 YLREMRSLFMKVKVRKPDASRARSREVYIVATGRK 212
>gi|90022366|ref|YP_528193.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Saccharophagus degradans
2-40]
gi|123276498|sp|Q21H48|RLME_SACD2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|89951966|gb|ABD81981.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Saccharophagus degradans
2-40]
Length = 206
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 86/207 (41%), Positives = 130/207 (62%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS WL H ND YV+ +Q +G+R+R++YKL+++N+K ++++S + +VDLG++PG
Sbjct: 2 SRSKSSGRWLQEHFNDQYVKDSQKDGYRSRASYKLIELNDKDKLIKSGQTVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVAA+I G RVVA DIL M+ + GV F + DF + E + + +G DLV
Sbjct: 62 WSQVAAQIVGDG---GRVVASDILPMDSLAGVDFVQGDFTEEAVLEQLLELLGEAKADLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D ++M L E A A L IGG F K FQG ++++ ++
Sbjct: 119 ISDMAPNMSGIADVDQPKSMYLVELALDMAKTTLKIGGSFACKVFQGEGFDELVLACREC 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
FQKV+ KP ASR S E++++AKG++
Sbjct: 179 FQKVLVRKPSASRPRSREVYIVAKGYK 205
>gi|66047415|ref|YP_237256.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas syringae pv.
syringae B728a]
gi|289676016|ref|ZP_06496906.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas syringae pv.
syringae FF5]
gi|302185424|ref|ZP_07262097.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas syringae pv.
syringae 642]
gi|75500697|sp|Q4ZNQ4|RLME_PSEU2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|63258122|gb|AAY39218.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas syringae pv.
syringae B728a]
gi|330895314|gb|EGH27652.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330969643|gb|EGH69709.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 216
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S +WL H +D YV+ AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 3 RSKTSHNWLKEHFDDKYVKMAQKDGYRSRASYKLLEIQEKDKLIRPGMTVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + E I +A+G DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDAILEQILEAVGNTQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + ++K F
Sbjct: 120 SDMAPNMSGLSAVDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGFDVYHKDIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPSSSRDRSREQYLLARGFR 205
>gi|330504835|ref|YP_004381704.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas mendocina
NK-01]
gi|328919121|gb|AEB59952.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas mendocina
NK-01]
Length = 207
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 90/206 (43%), Positives = 126/206 (61%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S+ WL H +DPYV+ AQ +G+R+R++YKLL+I EK +IL+ +VDLG++PG W
Sbjct: 3 RSKTSQRWLKEHFDDPYVKMAQKDGYRSRASYKLLEIQEKDRILRPGMTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF D + + +AI DLV+
Sbjct: 63 SQVTSRVIGDK---GRLIASDILEMDAIPDVTFIQGDFTDDAVFTRLLEAIGENPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G R D R M LCE A A +L GGDFL+K FQG + +++ F
Sbjct: 120 SDMAPNMSGVRTADQARAMYLCELALDLAGRVLRPGGDFLIKIFQGEGFDAYHKQVRETF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP++SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPLSSRDRSREQYLLARGFR 205
>gi|296108439|ref|YP_003620140.1| cell division protein methyltransferase FtsJ [Legionella
pneumophila 2300/99 Alcoy]
gi|295650341|gb|ADG26188.1| cell division protein methyltransferase FtsJ [Legionella
pneumophila 2300/99 Alcoy]
Length = 206
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WL H +D YV++AQ EG+R+R+ YKL +I++K +++ +VDLG++PG
Sbjct: 2 NRTKSSKRWLQEHFDDVYVKKAQAEGYRSRAVYKLKEIDDKESLIKPGMTVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
W+Q A+ + R+VA+DIL M+ + V+F DF + + + + I DL+
Sbjct: 62 WTQYASEKMKGS---GRLVALDILPMDALPNVEFILGDFREDNVLQELINLIPQRTLDLL 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G ID R M L E A FA +ML GG+ LVK F G ++++ +
Sbjct: 119 LSDMAPNMSGSSAIDIPRAMYLVELAFDFAEKMLKPGGNMLVKIFHGSGFDELVKQARAS 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KV+ KP ASR+ S E +LLAKG+
Sbjct: 179 FEKVVIRKPSASRSRSKETYLLAKGY 204
>gi|296313876|ref|ZP_06863817.1| ribosomal RNA large subunit methyltransferase J [Neisseria
polysaccharea ATCC 43768]
gi|296839605|gb|EFH23543.1| ribosomal RNA large subunit methyltransferase J [Neisseria
polysaccharea ATCC 43768]
Length = 206
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 90/206 (43%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTILADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVAA++ G + V A+DIL ME + GV F + DF + D + P DLV+
Sbjct: 64 SQVAAKLAGPSGA---VFALDILPMEAVNGVSFIQGDFRENDVLAQFETLLNNRPLDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ D R++ LCE A FA + L GG FLVK FQG + + ++ F
Sbjct: 121 CDMAPNMSGNAVSDQARSLYLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMRGIF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL K R
Sbjct: 181 GTVQTRKPEASRNRSSEIYLLGKNKR 206
>gi|149909287|ref|ZP_01897943.1| ribosomal RNA large subunit methyltransferase J [Moritella sp.
PE36]
gi|149807604|gb|EDM67552.1| ribosomal RNA large subunit methyltransferase J [Moritella sp.
PE36]
Length = 214
Score = 191 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 120/213 (56%), Gaps = 4/213 (1%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
K + +GSS++WL H ND YV+ A+ +G R+R+ +KL +I K ++LQ IVDL
Sbjct: 4 TPKKKSTQKGSSKNWLLEHHNDKYVKDAKKQGLRSRATFKLEEIQAKDKLLQPGMNIVDL 63
Query: 75 GSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIG 133
G++PG WSQ A + G RV+A DIL M+PI GV F + DF D + +
Sbjct: 64 GAAPGGWSQFAVKHLGDK---GRVIACDILPMDPIAGVDFLQGDFRDEKVLSALLAKVGD 120
Query: 134 GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDIL 193
G D+V+SDMA G+ +D +M L E A E+L G F+VK FQG +
Sbjct: 121 GKIDVVVSDMAPNMSGNIGVDQPASMYLVELALEMCREVLKPNGSFVVKVFQGEGFEQYM 180
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP +SRA S E+F++AKG++
Sbjct: 181 KDVRSMFNVVKTRKPDSSRARSREVFIVAKGYK 213
>gi|77456998|ref|YP_346503.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas fluorescens
Pf0-1]
gi|123606009|sp|Q3KI92|RLME_PSEPF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|77381001|gb|ABA72514.1| 23S rRNA Um-2552 2'-O-methyltransferase [Pseudomonas fluorescens
Pf0-1]
Length = 209
Score = 191 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S WL RH+NDPYV++AQ +G+R+R++YKLL+I EK+++++ +VDLG++PG W
Sbjct: 3 RSKTSLGWLKRHVNDPYVKQAQKDGYRSRASYKLLEIQEKYKLIRPGMNVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + I +A+G + DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDAVLAQILEAVGNSQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G ++D + M LCE A A +L GG+F++K FQG + L +K F
Sbjct: 120 SDMAPNMSGTPEVDMPKAMFLCELALDLAERILKPGGNFVIKIFQGEGFDTYLKDARKKF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
K+ +KP +SR S E ++LA G+R
Sbjct: 180 DKIQMIKPDSSRGSSREQYMLAWGYR 205
>gi|332530812|ref|ZP_08406738.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Hylemonella gracilis
ATCC 19624]
gi|332039724|gb|EGI76124.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Hylemonella gracilis
ATCC 19624]
Length = 219
Score = 191 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 83/218 (38%), Positives = 121/218 (55%), Gaps = 7/218 (3%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
K++ +S + + + WLN H+NDPYV+ AQ EG+RAR+AYKL +I+E ++++ + IVDL
Sbjct: 1 MKIQTKSKKVN-KAWLNDHVNDPYVKLAQKEGYRARAAYKLKEIDETLRLVKPGQVIVDL 59
Query: 75 GSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
G +PG+WSQ R N V+ +D+L MEPI GV++ + DF + +
Sbjct: 60 GCAPGAWSQYLRRRLAPQGAAVGELNGSVIGLDLLPMEPIEGVQYIQGDFREAAVLAQLE 119
Query: 130 QAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
+ G P DLV+SDMA G +D R L A F L G + K F G
Sbjct: 120 ALLQGRPVDLVVSDMAPNLSGVASVDTARVEELVALAIDFCNAHLKPSGTLVAKVFHGSG 179
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
N++L L K +F+ V +KP ASR S E FL+ G +
Sbjct: 180 YNELLALFKNNFKTVKPLKPKASRDRSSETFLIGSGLK 217
>gi|54298779|ref|YP_125148.1| ribosomal RNA large subunit methyltransferase (cell division
protein FtsJ) [Legionella pneumophila str. Paris]
gi|81369695|sp|Q5X1A0|RLME_LEGPA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83305660|sp|Q5ZRT1|RLME_LEGPH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|53752564|emb|CAH13996.1| Ribosomal RNA large subunit methyltransferase (Cell division
protein FtsJ) [Legionella pneumophila str. Paris]
Length = 206
Score = 191 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WL H +D YV++AQ EG+R+R+ YKL +I++K +++ +VDLG++PG
Sbjct: 2 NRTKSSKRWLQEHFDDVYVKKAQAEGYRSRAVYKLKEIDDKESLIKPGMTVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
W+Q A+ + R+VA+DIL M+ + V+F DF + + + + I DL+
Sbjct: 62 WTQYASEKM---RGSGRLVALDILPMDALPNVEFILGDFREDNVLQELINLIPQRTLDLL 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G ID R M L E A FA +ML GG+ LVK F G ++++ +
Sbjct: 119 LSDMAPNMSGSSAIDIPRAMYLVELAFDFAEKMLKPGGNMLVKIFHGSGFDELVKQARAS 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KV+ KP ASR+ S E +LLAKG+
Sbjct: 179 FEKVVIRKPSASRSRSKETYLLAKGY 204
>gi|251792627|ref|YP_003007353.1| ribosomal RNA large subunit methyltransferase J [Aggregatibacter
aphrophilus NJ8700]
gi|247534020|gb|ACS97266.1| ribosomal RNA large subunit methyltransferase J [Aggregatibacter
aphrophilus NJ8700]
Length = 209
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ G N RV+A DIL+M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGRN---GRVIACDILEMDPIVGVDFLQGDFRDENVLNTLLERVGEDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLANKGSFVVKVFQGEGFDEYLKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFSVVKVRKPEASRDRSREVYIVASGYK 208
>gi|312884009|ref|ZP_07743726.1| 23S rRNA methyltransferase J [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368467|gb|EFP96002.1| 23S rRNA methyltransferase J [Vibrio caribbenthicus ATCC BAA-2122]
Length = 209
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 122/211 (57%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ N +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKIEEIQNKDKLLKPNMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ AA+I G +++A D+L M+PI GV F + DF D + + + I
Sbjct: 61 APGGWSQFAAKIVGEK---GQIIACDLLPMDPISGVSFLQGDFRDEAVLDALLERISPEM 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG ++ +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDNFVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRELFKVVKVRKPDSSRARSREVFIVATGYK 208
>gi|88860503|ref|ZP_01135141.1| ribosomal RNA large subunit methyltransferase J [Pseudoalteromonas
tunicata D2]
gi|88817701|gb|EAR27518.1| ribosomal RNA large subunit methyltransferase J [Pseudoalteromonas
tunicata D2]
Length = 209
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS+ WL H +D YV AQ G R+R+ +KL ++ K ++++ +VDLG+
Sbjct: 1 MTKKKHSASSKRWLMEHFDDHYVLEAQKRGLRSRAMFKLEELQTKDKLIKDGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PGSWSQ A +TG +V+A DIL M+P+ GV+F + DF + + + I G
Sbjct: 61 APGSWSQYVAELTGFK---GKVIACDILPMDPLAGVEFLQGDFREESVLNALLERIDGKN 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VLSDMA GH +D +M L E A ++L G F VK FQG +
Sbjct: 118 VDVVLSDMAPNMSGHLSVDQAGSMYLVELALDMCHQVLKKNGSFAVKVFQGEGFEQYVQD 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP +SRA S E++L+A G++
Sbjct: 178 VRSCFTTVKIRKPDSSRARSREVYLVATGYK 208
>gi|238021385|ref|ZP_04601811.1| hypothetical protein GCWU000324_01284 [Kingella oralis ATCC 51147]
gi|237868365|gb|EEP69371.1| hypothetical protein GCWU000324_01284 [Kingella oralis ATCC 51147]
Length = 206
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 88/205 (42%), Positives = 122/205 (59%), Gaps = 4/205 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL+ H+NDPYV+RAQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSW
Sbjct: 4 RSKSSPAWLHEHVNDPYVKRAQKDGYRARAAYKLLEINEKDKLIKQGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQ+AA++ G +V A+DIL M+ + GV F + DF + + + DLV+
Sbjct: 64 SQIAAKLVG---KTGKVFALDILPMDALDGVDFIQGDFREEAVLAEFERLLDNRALDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA G+ ID R+ LCE A FA L GG FLVK FQG + + +++ F
Sbjct: 121 CDMAPNMSGNDTIDQARSFYLCELALDFARGHLKTGGAFLVKVFQGSGYQEYMAAMREVF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP ASR S E++LL K
Sbjct: 181 GTVQTRKPDASRNRSSEIYLLGKNK 205
>gi|298488448|ref|ZP_07006479.1| 23S rRNA U2552 ribose 2'-O-methyltransferase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298157073|gb|EFH98162.1| 23S rRNA U2552 ribose 2'-O-methyltransferase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 216
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S +WL H +D YV+ AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 3 RSKTSHNWLKEHFDDKYVKMAQKDGYRSRASYKLLEIQEKDKLIRPGMTVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + E I +A+G DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDKILEQILEAVGNTQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + ++K F
Sbjct: 120 SDMAPNMSGLSAVDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGFDIYHKDIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPSSSRDRSREQYLLARGFR 205
>gi|88797615|ref|ZP_01113204.1| cell division protein FtsJ [Reinekea sp. MED297]
gi|88779787|gb|EAR10973.1| cell division protein FtsJ [Reinekea sp. MED297]
Length = 206
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S+DWL H +DP+V +A+ +G+R+R++YKLL++ EK ++++ +VDLGS+PG W
Sbjct: 3 RPKNSKDWLKEHFDDPFVHKAKQDGYRSRASYKLLELCEKDRLIRPGMMVVDLGSAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVL 140
SQVAAR+ G + RVVA DIL+M+ + V+F + DF D + DLV+
Sbjct: 63 SQVAARMVG---DQGRVVASDILEMDAVPDVEFIQGDFTDEAVYQALLDCIGDRPVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G+ ID M L E A A +L GG F+ K F G ++ + +++ +
Sbjct: 120 SDMAPNMSGNAVIDQPAAMYLVELALDMAQSILRPGGAFVAKLFHGAGFDEYVKTVRQQY 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV+ KP ASRA S E +++A GF+
Sbjct: 180 TKVVMRKPEASRARSRETYIVATGFK 205
>gi|254491856|ref|ZP_05105035.1| ribosomal RNA large subunit methyltransferase J [Methylophaga
thiooxidans DMS010]
gi|224463334|gb|EEF79604.1| ribosomal RNA large subunit methyltransferase J [Methylophaga
thiooxydans DMS010]
Length = 205
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL H +D YV++AQ EG R+R+ +KL +I++K ++L+ +VDLG++PG W
Sbjct: 3 KSKSSQGWLKEHFDDQYVKKAQKEGHRSRATFKLDEIDQKDKLLRPGMSVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVL 140
S A R G ++ VVA+DIL M P+ GV F + DF + + + + + + G DLVL
Sbjct: 63 SDYAFRKVG---DSGTVVALDILPMTPLTGVHFIEGDFREDEVLDELNKVLNGREIDLVL 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G ID +M L E A FA+ L+ G FLVK FQG + L ++ F
Sbjct: 120 SDMAPNMSGVGSIDQPASMYLVELALDFAVNNLSKQGCFLVKVFQGEGFDAYLKQMRDSF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV+ KP ASRA S E++LL KG +
Sbjct: 180 NKVVTRKPGASRARSREVYLLGKGLK 205
>gi|293609978|ref|ZP_06692280.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828430|gb|EFF86793.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 207
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 23 QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWS 82
SSR W+ H++DP+V++AQ EG+RAR+AYKLL+I EK+++++ +VDLG++PGSWS
Sbjct: 2 SKSSRAWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVVDLGAAPGSWS 61
Query: 83 QVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
Q+A ++ GS V+A DIL M+ + V F + DF + +E + + G D+V+S
Sbjct: 62 QIAGKLVGSK---GLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNILNGRQVDIVIS 118
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
DMA T G+R +D R + LCE A FA ++L G F+VK FQG ++ + F
Sbjct: 119 DMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPNGQFVVKVFQGAGFDEFRKQVVDSFD 178
Query: 202 KVIHVKPVASRAESVEMFLLAKGFRK 227
+ KP ASRA S E+FL+ +G +K
Sbjct: 179 VLKTAKPAASRARSKEVFLVGQGRKK 204
>gi|262274890|ref|ZP_06052701.1| 23S rRNA methylase [Grimontia hollisae CIP 101886]
gi|262221453|gb|EEY72767.1| 23S rRNA methylase [Grimontia hollisae CIP 101886]
Length = 209
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
WL H +D YVQ AQ +G+R+R+ +KL +I K ++L+ +VDLG++PG WSQ AA
Sbjct: 12 RWLKEHFDDKYVQEAQKKGFRSRAIFKLEEIQGKDKLLKPGMTVVDLGAAPGGWSQYAAE 71
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYP 146
G ++ +V+A DIL M+ + GV F + DF + + + D+V+SDMA
Sbjct: 72 QVG---DSGQVIACDILPMDSLPGVAFLQGDFREEAVLNALLDRIQPDMVDVVMSDMAPN 128
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G+ D R M L E A E+L G F+VK FQG + L ++K F+ V
Sbjct: 129 MSGNLVSDQARAMYLVELALDMCREVLAPNGSFIVKVFQGEGFDQYLAEVRKMFKAVKIR 188
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SRA S E++++A G++
Sbjct: 189 KPDSSRARSREVYIVATGYK 208
>gi|330963967|gb|EGH64227.1| FtsJ cell division protein [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 216
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S +WL H +D YV+ AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 3 RSKTSHNWLKEHFDDKYVKMAQKDGYRSRASYKLLEIQEKDKVIRPGMTVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + E I +A+G DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDAILEQILEAVGNTQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + ++K F
Sbjct: 120 SDMAPNMSGLSAVDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGFDIYHKDIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPSSSRDRSREQYLLARGFR 205
>gi|330721347|gb|EGG99422.1| Cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase J [gamma proteobacterium IMCC2047]
Length = 207
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 121/206 (58%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL+ H ND YV+++Q +G+R+R++YKLL++ +K ++ + ++DLGS+PG W
Sbjct: 3 RSKSSGRWLDEHFNDQYVKKSQQDGYRSRASYKLLELQDKDKLFKPGMSVLDLGSAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNPDLVL 140
SQVA + G RVVA DIL MEPI G F + DF +++ ++ I DLV+
Sbjct: 63 SQVAVELVGDK---GRVVASDILPMEPIAGADFVEGDFTEMEVYDQILNVLGEDKVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D + M L E A A ++L GG + K F G +++L + F
Sbjct: 120 SDMAPNMSGVSAVDQPKAMYLVELAVDMADQILKPGGALIAKVFHGDGFDELLKTTRSKF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+KV KP ASRA S E +L+AK F+
Sbjct: 180 KKVQIRKPDASRARSKEQYLVAKDFK 205
>gi|71734802|ref|YP_276319.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|257482269|ref|ZP_05636310.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. tabaci ATCC 11528]
gi|289624594|ref|ZP_06457548.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|289646953|ref|ZP_06478296.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. aesculi str. 2250]
gi|83305664|sp|Q48E69|RLME_PSE14 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|71555355|gb|AAZ34566.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|320322536|gb|EFW78629.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. glycinea str. B076]
gi|320329995|gb|EFW85982.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868238|gb|EGH02947.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330987047|gb|EGH85150.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. lachrymans str. M301315]
Length = 216
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S +WL H +D YV+ AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 3 RSKTSHNWLKEHFDDKYVKMAQKDGYRSRASYKLLEIQEKDKLIRPGMTVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + E I +A+G DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDKILEQILEAVGNTQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + ++K F
Sbjct: 120 SDMAPNMSGLSAVDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGFDVYHKDIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPSSSRDRSREQYLLARGFR 205
>gi|77166028|ref|YP_344553.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosococcus oceani
ATCC 19707]
gi|254436320|ref|ZP_05049826.1| ribosomal RNA large subunit methyltransferase J [Nitrosococcus
oceani AFC27]
gi|123593534|sp|Q3J823|RLME_NITOC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|76884342|gb|ABA59023.1| 23S rRNA Um-2552 2'-O-methyltransferase [Nitrosococcus oceani ATCC
19707]
gi|207088010|gb|EDZ65283.1| ribosomal RNA large subunit methyltransferase J [Nitrosococcus
oceani AFC27]
Length = 212
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 119/208 (57%), Gaps = 4/208 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ S WL H D YV +A+ +G+R+R+ +KL +I+ + ++L R ++DLG++PG
Sbjct: 3 KRKSHSARWLREHFRDSYVIQAKAQGYRSRAVFKLQEIDTRERLLGPGRVVIDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WSQ AA G RV+A+DIL M GV+F + DF + + ++ + G DLV
Sbjct: 63 WSQWAAERVGE---RGRVIAMDILPMLSCPGVQFIQGDFREDNVLAELQNTLAGCVVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D R + L E A FA E L G FL+KTFQG + + ++++
Sbjct: 120 MSDMAPNMSGMAAVDQPRAIYLGELALAFAQESLGPEGSFLLKTFQGEGFDALYEVIRQD 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F +V KP ASR S E++++A+ RK
Sbjct: 180 FSRVRIHKPPASRGRSREVYIVARRSRK 207
>gi|54295625|ref|YP_128040.1| ribosomal RNA large subunit methyltransferase (cell division
protein FtsJ) [Legionella pneumophila str. Lens]
gi|81367654|sp|Q5WT13|RLME_LEGPL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|53755457|emb|CAH16953.1| Ribosomal RNA large subunit methyltransferase (Cell division
protein FtsJ) [Legionella pneumophila str. Lens]
gi|307611667|emb|CBX01358.1| ribosomal RNA large subunit methyltransferase [Legionella
pneumophila 130b]
Length = 206
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WL H +D YV++AQ EG+R+R+ YKL +I++K +++ +VDLG+SPG
Sbjct: 2 NRTKSSKRWLQEHFDDVYVKKAQAEGYRSRAVYKLKEIDDKESLIKPGMTVVDLGASPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
W+Q A+ + R+VA+DIL M+ + V+F DF + + + + I DL+
Sbjct: 62 WTQYASEKMKGS---GRLVALDILPMDALPNVEFILGDFREDNVLQELINLIPQRTLDLL 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G ID R M L E A FA +ML GG+ LVK F G ++++ +
Sbjct: 119 LSDMAPNMSGSSAIDIPRAMYLVELAFDFAEKMLKPGGNMLVKIFHGSGFDELVKQARAS 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KV+ KP ASR+ S E +LLAKG+
Sbjct: 179 FEKVVIRKPSASRSRSKETYLLAKGY 204
>gi|170717397|ref|YP_001784501.1| 23S rRNA methyltransferase J [Haemophilus somnus 2336]
gi|168825526|gb|ACA30897.1| ribosomal RNA large subunit methyltransferase J [Haemophilus somnus
2336]
Length = 209
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 4/210 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQSDRLFKHGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A R G + RV+A DIL+M+PI+GV F + DF D + + + + +
Sbjct: 61 APGGWSQYAVRQIG---DLGRVIACDILEMDPIVGVDFLQGDFRDENVLQALLERVGEKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG +D L
Sbjct: 118 VDVVMSDMAPNFSGMPAVDIPRAMYLVELALDMCKQVLATNGCFVVKVFQGEGFDDYLKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F V KP ASR S E++++A G+
Sbjct: 178 IRSLFNTVKVRKPEASRGRSREVYIVAMGY 207
>gi|167856350|ref|ZP_02479078.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
parasuis 29755]
gi|167852517|gb|EDS23803.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
parasuis 29755]
Length = 208
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R SS WL H D +VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 RKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQTDRLFKHGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDL 138
WSQ G RV+A DILDM PI+GV F + DF + + + + G D+
Sbjct: 63 GWSQYVVTQIGDK---GRVIACDILDMNPIVGVDFLQGDFCEESVLNALLERVGEGKVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG +D L ++
Sbjct: 120 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLAPKGSFVVKVFQGEGFDDYLREIRS 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 180 LFNVVKVRKPEASRDRSREVYIVATGYK 207
>gi|109897891|ref|YP_661146.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudoalteromonas
atlantica T6c]
gi|123171407|sp|Q15VJ6|RLME_PSEA6 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|109700172|gb|ABG40092.1| 23S rRNA Um-2552 2'-O-methyltransferase [Pseudoalteromonas
atlantica T6c]
Length = 209
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ SS+ WL H +D YV +A+ +G R+R+ +KL +I K +++ +VDLG+
Sbjct: 1 MGKNKQSESSKRWLKEHFDDKYVIKAKKQGLRSRAVFKLEEIQAKDGLIKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ A + G N + V+A DIL M+P+ GV F DF + + + IGG
Sbjct: 61 APGGWSQYAVKQVGDNGH---VIACDILSMDPLPGVDFLMGDFREEAVLDALLNKIGGKN 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ D ++M L E + ++L G + VK F G +
Sbjct: 118 VDVVMSDMAPNMTGNDTADQAKSMYLVELSLDMCRQVLKKNGSYTVKVFMGEGFDQFFNE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+K F+ V KP +SRA S E++L+A GF+
Sbjct: 178 VKNAFKVVKTRKPDSSRARSREVYLVATGFK 208
>gi|254448851|ref|ZP_05062307.1| ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium HTCC5015]
gi|198261541|gb|EDY85830.1| ribosomal RNA large subunit methyltransferase J [gamma
proteobacterium HTCC5015]
Length = 206
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 114/206 (55%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL H +D YV RAQ EG+R+R+ YKL +I++K ++ S +R++DLG++PG W
Sbjct: 3 RSKSSQRWLKEHFDDIYVARAQQEGFRSRAVYKLQEIDQKAKLFHSGQRVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQ A G VVA DIL+MEPI V F DF + I GG P DLV+
Sbjct: 63 SQYVADAVGDKGT---VVASDILEMEPIPNVDFVCGDFREEVVLNKILDQFGGEPADLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G ID R M L E A A + L GG F+ K FQG ++ + LK F
Sbjct: 120 SDMAPNMSGMDAIDQPRAMYLVELALDLARQTLRPGGGFVCKLFQGEGSDVFIAELKSSF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++ KGF+
Sbjct: 180 NSVAVRKPKASRPRSREVYAQCKGFK 205
>gi|149185550|ref|ZP_01863866.1| 23S rRNA methylase [Erythrobacter sp. SD-21]
gi|148830770|gb|EDL49205.1| 23S rRNA methylase [Erythrobacter sp. SD-21]
Length = 219
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 107/221 (48%), Positives = 150/221 (67%), Gaps = 5/221 (2%)
Query: 7 SSSRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
S S + +V+ + SS WL R +NDPYV++A+ +G+R+R+AYKL++++EK +L
Sbjct: 2 SRSGKDKDTRVRTAKKRSESSTRWLQRQLNDPYVKQAKADGYRSRAAYKLIEMDEKFGLL 61
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ RIVDLG +PG WSQVA ++ VV ID+L+ EPI GV F+ DF+D D+
Sbjct: 62 KGASRIVDLGITPGGWSQVARKVRPK----ATVVGIDLLETEPIEGVTIFQMDFMDDDAP 117
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
+ +A+GG DLV+SDMA T+GH++ DHLRTM L EAA +FA+E L+ GG FL K
Sbjct: 118 RVLEEALGGKADLVMSDMAANTVGHKQTDHLRTMGLVEAAAWFAVENLDTGGTFLAKVLA 177
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GGT D+L LLKKHF+ V H KP ASR S E +++A+GF+
Sbjct: 178 GGTDKDLLDLLKKHFKTVKHAKPPASRKGSSEWYVIAQGFK 218
>gi|93006845|ref|YP_581282.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Psychrobacter
cryohalolentis K5]
gi|122414928|sp|Q1Q955|RLME_PSYCK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|92394523|gb|ABE75798.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Psychrobacter
cryohalolentis K5]
Length = 210
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 128/211 (60%), Gaps = 4/211 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +++N+ SS W+ HI+D YVQ+AQ +G+RAR+AYKLL+INEK +++ +V
Sbjct: 1 MATRIENKKLSKSSSAWMKEHIDDHYVQKAQKDGYRARAAYKLLEINEKTNLIKKGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QA 131
DLGS+PGSWSQVA + G ++A DIL M+ + V F + DF + + ++ I +
Sbjct: 61 DLGSAPGSWSQVAGHLVGEK---GILIASDILPMDTLPDVTFIQGDFREPEVFDRIMAEV 117
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+VLSDMA T G+ ID R M LCE A FAL L GG ++K FQG T +
Sbjct: 118 GDRQVDVVLSDMAPNTAGNSAIDQPRMMYLCELAVDFALATLPEGGALIMKVFQGEGTQE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ ++ F K+ +KP ASR S E+F +A
Sbjct: 178 LRKQMQADFSKIRSIKPGASRPRSKEIFWIA 208
>gi|91228945|ref|ZP_01262842.1| cell division protein FtsJ [Vibrio alginolyticus 12G01]
gi|91187505|gb|EAS73840.1| cell division protein FtsJ [Vibrio alginolyticus 12G01]
Length = 209
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKIDEIQTKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGN 135
+PG WSQ AA+I G ++ +++A D+L M+PI GV F + DF D E + +
Sbjct: 61 APGGWSQYAAKIVG---DSGQIIACDLLPMDPIAGVSFLQGDFRDDAVLEALLERIQPSM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLARNGSFVVKVFQGEGFDQYVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRDMFKAVKIRKPDSSRARSREVFVVATGYK 208
>gi|221134032|ref|ZP_03560337.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Glaciecola sp. HTCC2999]
Length = 206
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
S+ W+ H+NDPYV++AQ++G+R+R++YKL++INEK Q+++ ++DLGS+PG W
Sbjct: 3 KPKPSKKWMEDHLNDPYVKKAQVDGYRSRASYKLIEINEKDQLVRPGNIVMDLGSAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI-RQAIGGNPDLVL 140
SQV A + G + RV+A DIL M+ I+GV F + DF D + I ++ D V+
Sbjct: 63 SQVLAPMVG---DAGRVIASDILPMDSIVGVSFLQGDFTDEAVYNAILKELGDDRVDTVV 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G+ D ++ L E A A +L GG F K FQG + + +++ F
Sbjct: 120 SDMAPNLSGNNTTDQYSSIYLVELALDMARNVLKPGGGFCAKVFQGVGYEEYVKEVRQSF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KVI KP ASR S E++++ KGF+
Sbjct: 180 SKVIIRKPAASRPRSREVYVVGKGFK 205
>gi|225025120|ref|ZP_03714312.1| hypothetical protein EIKCOROL_02012 [Eikenella corrodens ATCC
23834]
gi|224942081|gb|EEG23290.1| hypothetical protein EIKCOROL_02012 [Eikenella corrodens ATCC
23834]
Length = 207
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 92/207 (44%), Positives = 130/207 (62%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WLN H+NDPYV +AQ +G+RAR+AYKLL+INEK +++++ + DLGS+PGS
Sbjct: 4 TRSKSSKSWLNEHVNDPYVHQAQKDGYRARAAYKLLEINEKDKLIKNGTVLADLGSAPGS 63
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVA ++ G+ RV A+DIL MEPI GV F + DF + + E + + G DLV
Sbjct: 64 WSQVAVKLAGA---QGRVFALDILPMEPIAGVSFIQGDFRENEVLEELENLLEGRALDLV 120
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+ D+A G+ D R+ LCE A FA E L GG+ LVK FQG + + ++
Sbjct: 121 ICDIAPNMSGNAVTDQARSYVLCELALDFAAEHLKTGGNMLVKVFQGAGFQEYMQAMRGV 180
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F +V KP ASR+ S E++LL + R
Sbjct: 181 FAQVQVRKPKASRSRSSEVYLLGRNKR 207
>gi|91775135|ref|YP_544891.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacillus
flagellatus KT]
gi|123380563|sp|Q1H387|RLME_METFK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91709122|gb|ABE49050.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methylobacillus
flagellatus KT]
Length = 207
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 89/207 (42%), Positives = 128/207 (61%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ +S+ WL H+ND +V+RAQ +G+RAR+AYKLL+I++K Q+++ IVDLGS+PGS
Sbjct: 2 KRRPTSKAWLQEHVNDEFVKRAQRDGYRARAAYKLLEIDDKDQLIKPGMTIVDLGSAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLV 139
WSQVA + A RV+A+DIL+M PI GV+F + DF + + + G DLV
Sbjct: 62 WSQVAVQRL---AGQGRVIALDILEMPPIPGVEFIQGDFREEEILLVLEKSLNGKPVDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
++DMA G +D R L E A F+ E L GG+FLVK F G ++I+ ++
Sbjct: 119 IADMAPNISGISDVDQARAAYLVELALEFSREWLKPGGNFLVKVFVGSGFDEIVMAMRDS 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F+KV+ KP ASR S E++LL R
Sbjct: 179 FEKVVTRKPKASRDRSSEVYLLGLKRR 205
>gi|296112663|ref|YP_003626601.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
RH4]
gi|295920357|gb|ADG60708.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
RH4]
gi|326560921|gb|EGE11286.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
7169]
gi|326563843|gb|EGE14094.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
46P47B1]
gi|326566515|gb|EGE16661.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
12P80B1]
gi|326566854|gb|EGE16993.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
103P14B1]
gi|326569819|gb|EGE19869.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
BC8]
gi|326571269|gb|EGE21291.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
BC1]
gi|326571575|gb|EGE21590.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
BC7]
gi|326575145|gb|EGE25073.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
CO72]
gi|326576769|gb|EGE26676.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
101P30B1]
gi|326577555|gb|EGE27432.1| FtsJ-like methyltransferase family protein [Moraxella catarrhalis
O35E]
Length = 210
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 134/211 (63%), Gaps = 4/211 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++KN+ SSR W+ HI+D YVQ+AQ EG+RAR+AYKLL+INEK +++ +V
Sbjct: 1 MATRIKNKKLSKSSRAWMKEHIDDFYVQKAQKEGYRARAAYKLLEINEKTGLIKKGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLGS+PGSWSQVA ++ G + ++A DIL M+ + V F + DF + + I +
Sbjct: 61 DLGSAPGSWSQVAGQLVG---DAGTLIASDILPMDTLENVIFIQGDFREEAVFNQIMNEV 117
Query: 133 GGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
GG D+VLSDMA T G +D R M LCE A FAL++L +GG ++K FQG + +
Sbjct: 118 GGRAVDVVLSDMAPNTSGMAAVDQPRMMYLCELAVDFALKVLPVGGALIMKVFQGEGSQE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ ++K F K+ +KP ASR S EMF +A
Sbjct: 178 LRAQMQKQFSKIKSIKPAASRPRSKEMFWVA 208
>gi|256823582|ref|YP_003147545.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Kangiella koreensis DSM
16069]
gi|256797121|gb|ACV27777.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Kangiella koreensis DSM
16069]
Length = 206
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 124/207 (59%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS W+ H +DPYV+++Q +G+R+R+ YKL ++++K+++L +VDLG++PG
Sbjct: 2 SRSKSSHRWMREHFDDPYVKKSQKDGYRSRAVYKLEELDQKYKLLGKGVTVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQ A GS ++ A+DIL+M+P+ V F + DF + + IG + DLV
Sbjct: 62 WSQYVAYKMGS---QGKIFALDILEMDPLPDVDFIQGDFREEAVLNQLLDKIGKHKADLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M LCE A A +L GG+++VK FQG +D + ++
Sbjct: 119 LSDMAPNMSGVDAVDQPRGMYLCELALELAQTVLAKGGNYVVKVFQGEGFDDYIRQCREV 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV+ KP ASR S E++++ G++
Sbjct: 179 FDKVLIRKPDASRGRSREVYVVGIGYK 205
>gi|71066294|ref|YP_265021.1| 23S rRNA methylase, heat shock protein [Psychrobacter arcticus
273-4]
gi|83305666|sp|Q4FQX1|RLME_PSYA2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|71039279|gb|AAZ19587.1| 23S rRNA methylase, heat shock protein [Psychrobacter arcticus
273-4]
Length = 210
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 4/211 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +++N+ SS W+ HI+D YVQ+AQ +G+RAR+AYKLL+INEK +++ +V
Sbjct: 1 MATRIENKKLSKSSSAWMKEHIDDHYVQKAQKDGYRARAAYKLLEINEKTNLIKKGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QA 131
DLGS+PGSWSQVA ++ G ++A DIL M+ + V F + DF + + ++ I +
Sbjct: 61 DLGSAPGSWSQVAGQLVGEK---GILIASDILPMDTLPDVTFIQGDFREPEVFDHIMAEV 117
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+VLSDMA T G+ ID R M LCE A FAL L GG ++K FQG T +
Sbjct: 118 GDRQVDVVLSDMAPNTAGNSAIDQPRMMYLCELAVDFALATLPEGGALIMKVFQGEGTQE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ ++ F K+ +KP ASR S EMF +A
Sbjct: 178 LRKQMQADFSKIRSIKPGASRPRSKEMFWIA 208
>gi|113460867|ref|YP_718934.1| 23S rRNA methyltransferase J [Haemophilus somnus 129PT]
gi|122945233|sp|Q0I2R1|RLME_HAES1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|112822910|gb|ABI24999.1| 23S rRNA Um-2552 2'-O-methyltransferase [Haemophilus somnus 129PT]
Length = 209
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 118/210 (56%), Gaps = 4/210 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQSDRLFKHGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ A R G + RV+A DIL+M+PI+GV F + DF D + + + + +
Sbjct: 61 APGGWSQYAIRQIG---DLGRVIACDILEMDPIVGVDFLQGDFRDENVLQALLERVGEKK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG +D L
Sbjct: 118 VDVVMSDMAPNFSGMPAVDIPRAMYLVELALDMCKQVLATNGCFVVKVFQGEGFDDYLKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F V KP ASR S E++++A G+
Sbjct: 178 IRSLFNTVKVRKPEASRGRSREVYIVAMGY 207
>gi|241763937|ref|ZP_04761979.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax delafieldii
2AN]
gi|241366760|gb|EER61201.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax delafieldii
2AN]
Length = 220
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 85/218 (38%), Positives = 123/218 (56%), Gaps = 7/218 (3%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
KVK +S + + + WLN H+ND YV+ AQ EG+RAR+AYKL +I+E+ +++ +VDL
Sbjct: 1 MKVKTQSKKVN-KAWLNDHVNDTYVKLAQKEGYRARAAYKLKEIDEQLGLIKPGFTVVDL 59
Query: 75 GSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
GS+PG+WSQ R N ++A+DIL MEP+ GV F DF + + +
Sbjct: 60 GSTPGAWSQYVRRRLSPAGAAAGQLNGAIIALDILPMEPVEGVTFLHGDFREPEVLARLE 119
Query: 130 QAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
+A+ G D+V+SDMA G D R L E A FA L G +VK F G
Sbjct: 120 EALQGRTVDVVVSDMAPNLSGIESADAARIAHLVELAVDFACHHLKPEGALVVKLFHGSG 179
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+++ L K+ F+ V +KP ASR +S E FL+ G +
Sbjct: 180 YGELVALFKRTFKTVKPLKPKASRDKSSETFLVGIGLK 217
>gi|163802296|ref|ZP_02196190.1| cell division protein FtsJ [Vibrio sp. AND4]
gi|159173825|gb|EDP58639.1| cell division protein FtsJ [Vibrio sp. AND4]
Length = 209
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+S +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKIEEIQTKDKLLKSGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA+I G + +++A D+L M+PI GV F + DF D + + +
Sbjct: 61 APGGWSQYAAKIIGED---GQIIACDLLPMDPIAGVSFLQGDFRDEAVLDALLERIQPSM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG + +
Sbjct: 118 VDVVMSDMAPNIAGNNSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDQFVKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SRA S E+F++A G++
Sbjct: 178 VRDTFRVVKIRKPDSSRARSREVFVVASGYK 208
>gi|15602302|ref|NP_245374.1| 23S rRNA methyltransferase J [Pasteurella multocida subsp.
multocida str. Pm70]
gi|81637177|sp|Q9CNJ3|RLME_PASMU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|12720691|gb|AAK02521.1| FtsJ [Pasteurella multocida subsp. multocida str. Pm70]
Length = 209
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A DIL+M+PI+GV F + DF D + + G
Sbjct: 61 APGGWSQYVVSQIG---GAGRIIACDILEMDPIVGVDFLQGDFRDEKVLAALLARVGEGK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLATKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFSVVKVRKPEASRGRSREVYIVATGYK 208
>gi|262163950|ref|ZP_06031689.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio mimicus VM223]
gi|262172288|ref|ZP_06039966.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio mimicus MB-451]
gi|261893364|gb|EEY39350.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio mimicus MB-451]
gi|262027478|gb|EEY46144.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio mimicus VM223]
Length = 209
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSTRWLKEHFDDKYANEARKKGFRSRAIFKIEEIQNKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ AA++ G RV+A D+L ME I GV F + DF + + I
Sbjct: 61 APGGWSQFAAKVVGEG---GRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPEM 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG +D +
Sbjct: 118 VDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR+ S E+F++A G++
Sbjct: 178 VRDLFKVVKIRKPDSSRSRSREVFIVATGYK 208
>gi|326317394|ref|YP_004235066.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323374230|gb|ADX46499.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 218
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 125/215 (58%), Gaps = 6/215 (2%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
N + ++ WL+ H+ND YV+ AQ EG+RAR+AYKL +I+E +++ + +VDLGS+P
Sbjct: 4 NTKSKKVNKAWLHDHVNDTYVKLAQKEGYRARAAYKLKEIDETLGLIRPGQVVVDLGSAP 63
Query: 79 GSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
G+WSQ R N ++A+DIL MEPI GV F + DF + D +++ +
Sbjct: 64 GAWSQYLRRRMAPAGAATGQLNGTLIALDILPMEPIEGVTFLQGDFREEDVLARLQETVQ 123
Query: 134 GNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G P D+V+SDMA G +D +R L E A FA + L G +VK F G +
Sbjct: 124 GRPVDVVVSDMAPNLSGVESVDAVRIAHLIELAVDFAQQHLKPDGALVVKLFHGSGYTQL 183
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ L K++F+ V +KP ASR +S E FL+ G RK
Sbjct: 184 VQLFKENFRTVKPMKPKASRDKSSETFLVGMGLRK 218
>gi|148361109|ref|YP_001252316.1| ribosomal RNA large subunit methyltransferase J [Legionella
pneumophila str. Corby]
gi|148282882|gb|ABQ56970.1| ribosomal RNA large subunit methyltransferase J [Legionella
pneumophila str. Corby]
Length = 233
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H +D YV++AQ EG+R+R+ YKL +I++K +++ +VDLG++PG
Sbjct: 29 SRTKSSKRWLQEHFDDVYVKKAQAEGYRSRAVYKLKEIDDKESLIKPGMTVVDLGAAPGG 88
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
W+Q A+ + R+VA+DIL M+ + V+F DF + + + + I DL+
Sbjct: 89 WTQYASEKMKGS---GRLVALDILPMDALPNVEFILGDFREDNVLQELINLIPQRTLDLL 145
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G ID R M L E A FA +ML GG+ LVK F G ++++ +
Sbjct: 146 LSDMAPNMSGSSAIDIPRAMYLVELAFDFAEKMLKPGGNMLVKIFHGSGFDELVKQARAS 205
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KV+ KP ASR+ S E +LLAKG+
Sbjct: 206 FEKVVIRKPSASRSRSKETYLLAKGY 231
>gi|219870745|ref|YP_002475120.1| 23S rRNA methyltransferase J [Haemophilus parasuis SH0165]
gi|254809554|sp|B8F4C0|RLME_HAEPS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|219690949|gb|ACL32172.1| 23S rRNA methyltransferase J [Haemophilus parasuis SH0165]
Length = 208
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R SS WL H D +VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 RKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQTDRLFKHGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDL 138
WSQ G RV+A DILDM PI+GV F + DF + + + + G D+
Sbjct: 63 GWSQYVVTQIGDK---GRVIACDILDMNPIVGVDFLQGDFCEESVLNALLERVGEGKVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG +D L ++
Sbjct: 120 VMSDMAPNFSGMSSVDIPRAMYLVELALDMCRQVLAPKGSFVVKVFQGEGFDDYLREIRS 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 180 LFNVVKVRKPEASRDRSREVYIVATGYK 207
>gi|315634356|ref|ZP_07889643.1| ribosomal RNA large subunit methyltransferase J [Aggregatibacter
segnis ATCC 33393]
gi|315476946|gb|EFU67691.1| ribosomal RNA large subunit methyltransferase J [Aggregatibacter
segnis ATCC 33393]
Length = 209
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSTRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ G N RV+A DIL+M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGRN---GRVIACDILEMDPIVGVDFLQGDFRDENVLSTLLERVGEEK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLANKGSFVVKVFQGEGFDEYLKE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFSVVKVRKPEASRDRSREVYIVASGYK 208
>gi|254362182|ref|ZP_04978298.1| rRNA large subunit methyltransferase J [Mannheimia haemolytica
PHL213]
gi|261492457|ref|ZP_05989012.1| rRNA large subunit methyltransferase J [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261494533|ref|ZP_05991018.1| rRNA large subunit methyltransferase J [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|153093751|gb|EDN74694.1| rRNA large subunit methyltransferase J [Mannheimia haemolytica
PHL213]
gi|261309826|gb|EEY11044.1| rRNA large subunit methyltransferase J [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311873|gb|EEY13021.1| rRNA large subunit methyltransferase J [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 208
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 73/208 (35%), Positives = 111/208 (53%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R SS WL H D +VQ+A + R+R+ +KL +I + ++ + +VDLG++PG
Sbjct: 3 RKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDL 138
WSQ GS RV+A DILDM PI+GV F + DF + + + + ++
Sbjct: 63 GWSQYVVTQIGSK---GRVIACDILDMNPIVGVDFLQGDFREESVLNALLERVGEDKVNV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG ++ L ++
Sbjct: 120 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLATKGSFVVKVFQGEGFDEYLREIRS 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 180 LFSVVKVRKPEASRDRSREVYIVATGYK 207
>gi|71279764|ref|YP_270127.1| 23S rRNA methyltransferase J [Colwellia psychrerythraea 34H]
gi|83305657|sp|Q47YJ3|RLME_COLP3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|71145504|gb|AAZ25977.1| ribosomal RNA large subunit methyltransferase J [Colwellia
psychrerythraea 34H]
Length = 209
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ N+ + SS+ WL+ H +D YV++AQ G R+R+ +KL +IN K ++++ ++VDLG+
Sbjct: 1 MANKKHKASSQRWLDEHFDDEYVKKAQRLGLRSRAVFKLEEINIKDRLIKPGMKVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WS+ A ++ G +VVA DIL M+ I+GV F + DF + + + + I G
Sbjct: 61 APGGWSEYAVKVVGDK---GQVVACDILPMDAIVGVDFLEGDFREEEVLDALLTRINGKN 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ D R+M L E A ++L G F+VK FQG D +
Sbjct: 118 IDVVMSDMAANMTGNESADSARSMYLVELALDMCSQVLKPNGAFVVKVFQGAGFEDYMKA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+ V KP +SRA S E++L+A G++
Sbjct: 178 TRAVFKAVKTRKPESSRARSREVYLVATGYK 208
>gi|301156346|emb|CBW15817.1| 23S rRNA methyltransferase [Haemophilus parainfluenzae T3T1]
Length = 210
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQTDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-N 135
+PG WSQ G RV+A DILDM PI+GV F + DF D + + + +G
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILDMNPIVGVDFLQGDFRDENVLNALLERVGEAK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLAKKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFSVVKVRKPEASRGRSREVYIVASGYK 208
>gi|119897677|ref|YP_932890.1| ribosomal RNA large subunit methyltransferase J [Azoarcus sp. BH72]
gi|143459390|sp|A1K598|RLME_AZOSB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|119670090|emb|CAL94003.1| ribosomal RNA large subunit methyltransferase j [Azoarcus sp. BH72]
Length = 205
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 89/207 (42%), Positives = 123/207 (59%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ W++ H+ND YVQRA EG+RAR+AYKL++I+E+ ++L+ R +VDLG++PGS
Sbjct: 2 KRNKTSKAWMHEHLNDTYVQRANAEGYRARAAYKLMEIDERDRLLRPGRVVVDLGAAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
W QVA + GS+ RV+A+DIL M+P+ GV F + DF + + + G DLV
Sbjct: 62 WCQVARQRVGSD---GRVLALDILPMDPVPGVDFLQGDFTEDAVLAELESRLAGAAVDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R++ LCE A FA L GG FLVK FQG + +
Sbjct: 119 LSDMAPNLSGVATVDQARSIYLCELALDFARRHLKPGGQFLVKVFQGEGFMGFRKAMDEV 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++LL R
Sbjct: 179 FLSVQVRKPKASRDRSAEVYLLGVDLR 205
>gi|323144908|ref|ZP_08079471.1| ribosomal RNA large subunit methyltransferase J [Succinatimonas
hippei YIT 12066]
gi|322415306|gb|EFY06077.1| ribosomal RNA large subunit methyltransferase J [Succinatimonas
hippei YIT 12066]
Length = 228
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 3/207 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R S WL H +DPYV+ A G R+R+++KL ++ ++ +++++ +VDLG++PG
Sbjct: 4 RKRTASQTRWLKEHFSDPYVKEAHKRGLRSRASFKLEELQQRDRLIKAGNIVVDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLV 139
WS+ A + G +V+A DIL + PI V F + DF D + + IG D+V
Sbjct: 64 GWSEFAVKCVGEK---GKVIACDILPIRPIRNVTFLQGDFRDEAVFLKLYSMIGVGADVV 120
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G ID R M L E A A +L IGG F+VK F G + + L L+K
Sbjct: 121 LSDMAPNMSGTTAIDQPRAMLLSELALDMARRVLRIGGSFVVKVFTGSGSQEYLAELRKD 180
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A GF+
Sbjct: 181 FSTVKVRKPDASRDRSREVYMVATGFK 207
>gi|120611284|ref|YP_970962.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax citrulli
AAC00-1]
gi|143459163|sp|A1TQF0|RLME_ACIAC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120589748|gb|ABM33188.1| 23S rRNA Um-2552 2'-O-methyltransferase [Acidovorax citrulli
AAC00-1]
Length = 218
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 123/215 (57%), Gaps = 6/215 (2%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
N + ++ WL+ H+ND YV+ AQ EG+RAR+AYKL +I+E +++ + +VDLGS+P
Sbjct: 4 NTKSKKVNKAWLHDHVNDTYVKLAQKEGYRARAAYKLKEIDETLGLIRPGQVVVDLGSAP 63
Query: 79 GSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-I 132
G+WSQ R N ++A+DIL MEPI GV F + DF + D +++A
Sbjct: 64 GAWSQYLRRRMAPAGAAAGQLNGTLIALDILPMEPIEGVTFLQGDFREEDVLARLQEAVQ 123
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D+V+SDMA G +D +R L E A FA + L G +VK F G +
Sbjct: 124 ARPVDVVVSDMAPNLSGVESVDAVRIAHLIELAVDFAQQHLKPDGALVVKLFHGSGYAQL 183
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ L K+HF+ V +KP ASR +S E FL+ G RK
Sbjct: 184 VQLFKEHFRTVKPMKPKASRDKSSETFLVGMGLRK 218
>gi|149375763|ref|ZP_01893531.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter algicola
DG893]
gi|149359888|gb|EDM48344.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinobacter algicola
DG893]
Length = 206
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 76/206 (36%), Positives = 121/206 (58%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S WL H +D +V++++ +G+R+R++YKL++++ K ++ + + +VDLG++PG W
Sbjct: 3 RSKTSDRWLKEHFDDVWVKKSREDGYRSRASYKLIELDNKDRLFRPGQTVVDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQVA G N VVA DIL+M PI GV F + DF + + + +G D+V+
Sbjct: 63 SQVAIERVGDN---GVVVASDILEMSPIAGVAFVQGDFTEQSVLDELLDLLGDRRADVVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D M L E A A ++L GG F+ K FQG + +L ++K F
Sbjct: 120 SDMAPNMSGMAAVDIPNAMGLVELALDMAQQVLKPGGVFVAKVFQGEGFDALLAEMRKSF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V+ KP +SRA S E++ + KGF+
Sbjct: 180 GTVVSRKPDSSRARSREIYQVCKGFK 205
>gi|330875231|gb|EGH09380.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 216
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
S +WL H +D YV+ AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 3 RSKKSHNWLKEHFDDKYVKMAQKDGYRSRASYKLLEIQEKDKLIRPGMTVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + E I +A+G DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDKILEQILEAVGNTQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + ++K F
Sbjct: 120 SDMAPNMSGLSAVDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGFDVYHKDIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPSSSRDRSREQYLLARGFR 205
>gi|148652346|ref|YP_001279439.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Psychrobacter sp.
PRwf-1]
gi|189040324|sp|A5WCU8|RLME_PSYWF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|148571430|gb|ABQ93489.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Psychrobacter sp.
PRwf-1]
Length = 210
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SS+ W+ H++D YVQ AQ EG+RAR+AYKLL+INEK +++ +V
Sbjct: 1 MATRITNKGLSKSSKAWMKEHLDDHYVQLAQKEGYRARAAYKLLEINEKTNLIKKGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQA 131
DLGS+PGSWSQVA R+ G + ++A DIL M+ + V F + DF + ++ + +
Sbjct: 61 DLGSAPGSWSQVAGRLVG---DEGILIASDILPMDALENVTFIQGDFREEAVFDRLMSEV 117
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+VLSDMA T GH +D R + LCE A FAL +L GG ++K FQG
Sbjct: 118 GDRQVDVVLSDMAPNTSGHTAVDQPRMIYLCELAVDFALRVLPKGGSLVMKVFQGEGEQQ 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+ L+ F KV +KP ASR S E+F +A
Sbjct: 178 LRQQLQSQFSKVRTIKPAASRPRSKEVFWVATK 210
>gi|332288654|ref|YP_004419506.1| 23S rRNA methyltransferase J [Gallibacterium anatis UMN179]
gi|330431550|gb|AEC16609.1| 23S rRNA methyltransferase J [Gallibacterium anatis UMN179]
Length = 209
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H D +VQ+A + R+R+ +KL +I + ++ + N +VDLG+
Sbjct: 1 MGKKKRSASSTRWLNEHFKDKFVQQAHKQKLRSRAYFKLDEIQKTDKLFKPNMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ G RV+A DILDM+PI+GV F + DF + + +
Sbjct: 61 APGGWSQYVVTQIGE---RGRVIACDILDMDPIVGVDFLQGDFREEKVLNTLLEKIGDDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASQGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP ASR S E++++A G++
Sbjct: 178 IRSLFKTVKVRKPEASRDRSREVYIVAMGYK 208
>gi|88658179|ref|YP_507347.1| ribosomal RNA large subunit methyltransferase J [Ehrlichia
chaffeensis str. Arkansas]
gi|123493402|sp|Q2GGT6|RLME_EHRCR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|88599636|gb|ABD45105.1| ribosomal RNA large subunit methyltransferase J [Ehrlichia
chaffeensis str. Arkansas]
Length = 212
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 2/203 (0%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS WL+R +NDPYV A+ +G+R+R+ +KL++++ K I + + ++DLGSSPG WSQ
Sbjct: 2 SSTRWLHRQLNDPYVSLAKKQGYRSRATFKLIEMDSKFSIFKKGQYVLDLGSSPGGWSQF 61
Query: 85 AARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMA 144
AA+ N NN V A+DI +M+ I V F + D ++ + D++LSDMA
Sbjct: 62 AAQRVSHNNNNP-VFAVDIQNMDAIPNVIFIQCDIINDIEL-LSDKFHNKKFDVILSDMA 119
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G++++DH ++LCE + + G F+ K QG + +K +FQ V
Sbjct: 120 PKACGNKQVDHANIINLCEISLDIVVRFTRENGVFITKILQGEYEKEFYQSMKTYFQSVK 179
Query: 205 HVKPVASRAESVEMFLLAKGFRK 227
+ KP ASR +S EM+L+ GF+K
Sbjct: 180 YFKPKASRKDSSEMYLVGLGFKK 202
>gi|325578452|ref|ZP_08148587.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
parainfluenzae ATCC 33392]
gi|325160188|gb|EGC72317.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
parainfluenzae ATCC 33392]
Length = 210
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQTDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-N 135
+PG WSQ G RV+A DILDM I+GV F + DF D + + + +G
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILDMNSIVGVDFLQGDFRDENVLNALLERVGEAK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLAKKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G+R
Sbjct: 178 IRSLFSIVKVRKPEASRGRSREVYIVASGYR 208
>gi|82701616|ref|YP_411182.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosospira multiformis
ATCC 25196]
gi|123545045|sp|Q2YBT1|RLME_NITMU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|82409681|gb|ABB73790.1| 23S rRNA Um-2552 2'-O-methyltransferase [Nitrosospira multiformis
ATCC 25196]
Length = 206
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ W+ H+ND +V++A+ EG+R+R+AYKL++I E+ + + +VDLG++PG
Sbjct: 2 KRTKTSKAWMKEHVNDFFVRQAKKEGYRSRAAYKLMEIAERDHLFKPGMTVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLV 139
WSQVAA R VA+DIL+M PI GV F + DF + E Q DLV
Sbjct: 62 WSQVAAEKLKGK---GRAVALDILEMAPISGVTFIQGDFREASVLAELKEQLKDLPVDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+ DM+ G R ID R M L E A F E LN GG+FLVK FQG ++ ++
Sbjct: 119 ICDMSPNITGIRVIDQTRGMHLAELALEFCTEQLNSGGNFLVKVFQGSGFDEFFRAMRAT 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F +V+ KP+ASR S E++LL G R
Sbjct: 179 FHRVVTRKPLASRGRSSEIYLLGLGKR 205
>gi|71906582|ref|YP_284169.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Dechloromonas aromatica
RCB]
gi|83305658|sp|Q47HI2|RLME_DECAR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|71846203|gb|AAZ45699.1| 23S rRNA Um-2552 2'-O-methyltransferase [Dechloromonas aromatica
RCB]
Length = 205
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 81/207 (39%), Positives = 117/207 (56%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ W+ HIND YVQ A+ EGWR+R+A+KL+++++K ++L+ +VDLG++PG
Sbjct: 2 KRTRTSKAWMREHINDTYVQLARKEGWRSRAAFKLMEMDDKDKLLKHGEVVVDLGATPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLV 139
WSQVA + G V A+D+L+MEPI GV F + DF + + + Q LV
Sbjct: 62 WSQVAVKRVGDG---GLVFALDLLEMEPIHGVHFIQGDFREDEVLQQLEEQLGERRVGLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D R M L E F+ L G FLVK FQG L +++
Sbjct: 119 MSDMAPNMSGVPLVDQARIMHLAELGLEFSRVHLKPEGAFLVKVFQGTDYETFLKQMRET 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP ASR S E++LL + R
Sbjct: 179 FKTVAVRKPDASRDRSPELYLLGRTLR 205
>gi|330950314|gb|EGH50574.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas syringae Cit
7]
Length = 216
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 124/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S +WL H +D YV+ AQ +G+R+R++YKLL+I EK ++++ ++DLG++ G W
Sbjct: 3 RSKTSHNWLKEHFDDKYVKMAQKDGYRSRASYKLLEIQEKDKLIRPGMTVIDLGAARGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + E I +A+G DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDAILEQILEAVGNTQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + ++K F
Sbjct: 120 SDMAPNMSGLSAVDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGFDVYHKDIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPSSSRDRSREQYLLARGFR 205
>gi|74317150|ref|YP_314890.1| cell division protein FtsJ [Thiobacillus denitrificans ATCC 25259]
gi|123612003|sp|Q3SJR5|RLME_THIDA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|74056645|gb|AAZ97085.1| cell division protein FtsJ [Thiobacillus denitrificans ATCC 25259]
Length = 220
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 115/207 (55%), Gaps = 4/207 (1%)
Query: 18 KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSS 77
+ S W++ H+ D YV++AQ +G+R+R+AYKLL+I+ + +L +VDLG++
Sbjct: 3 QKPKRTKSGSAWMHEHVTDAYVKKAQQDGFRSRAAYKLLEIDSRDHLLHPGMTVVDLGAA 62
Query: 78 PGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNP 136
PGSW QVA + RV+AID+L + P+ GV+ + DF D+ ++
Sbjct: 63 PGSWCQVAVQKMKR---QGRVLAIDLLPVAPLPGVEALQGDFTAPDTLAWLENTLQAARV 119
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLVLSDMA G D R LCE A FA+ L G FLVK FQG D +
Sbjct: 120 DLVLSDMAPNMSGVMLRDQARHYELCELALDFAVNWLKPDGAFLVKVFQGSGFEDFRNAM 179
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAK 223
++ F +V+ KP ASR S E++LL +
Sbjct: 180 RRAFDQVVIRKPDASRDRSSEVYLLGR 206
>gi|330888666|gb|EGH21327.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. mori str. 301020]
Length = 216
Score = 188 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S +WL H +D YV+ AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 3 RSKTSHNWLKEHFDDKYVKMAQKDGYRSRASYKLLEIQEKDKLIRPGMTVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + E I +A+G DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDKILEQILEAVGNTQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + ++K F
Sbjct: 120 SDMAPNMSGLSAVDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGCDVYHKDIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SR S E +LLA+GFR
Sbjct: 180 DKVQMRKPSSSRDRSREQYLLARGFR 205
>gi|307824614|ref|ZP_07654838.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacter
tundripaludum SV96]
gi|307734268|gb|EFO05121.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylobacter
tundripaludum SV96]
Length = 205
Score = 188 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 121/207 (58%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS W+ H D YV+ AQ +G+R+R+ +KL +I +K Q+++ I+DLG++PG
Sbjct: 2 GRSKSSSRWMQEHFEDEYVKMAQAQGYRSRAVFKLKEIQDKDQLIKPGMNIIDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQ A +I G +++A+DIL M+P+ GV F + DF + + + + G +LV
Sbjct: 62 WSQFARQIVGKKD---KIIALDILAMDPLEGVDFIQGDFREQAVLDQLYAVLDGAPINLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ +D R++ L E A A +L G FLVK F G D +++
Sbjct: 119 MSDMAPNMSGNKGVDQPRSIYLGELALETAKTVLAKDGVFLVKLFHGAGFEDFHKEVQQS 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KVI KP ASR S E+++LAKGF+
Sbjct: 179 FTKVIIRKPKASRPRSNEVYILAKGFK 205
>gi|257454690|ref|ZP_05619946.1| ribosomal RNA large subunit methyltransferase J [Enhydrobacter
aerosaccus SK60]
gi|257448000|gb|EEV22987.1| ribosomal RNA large subunit methyltransferase J [Enhydrobacter
aerosaccus SK60]
Length = 210
Score = 188 bits (476), Expect = 8e-46, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 132/213 (61%), Gaps = 4/213 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ HI+D YV+ AQ +G+RAR+AYKLL+INEK Q+++ +V
Sbjct: 1 MATRITNKKLSKSSRAWMKEHIDDHYVKLAQRDGYRARAAYKLLEINEKLQLIKKGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QA 131
DLGS+PGSWSQVA ++ G + +++A DIL M+ + V F + DF + ++ I +
Sbjct: 61 DLGSAPGSWSQVAGKLVG---DTGKLIASDILPMDTLENVTFIQGDFREQAVFDNIMAEV 117
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
++VLSDMA T G +D R + LCE A FA ++L GG ++K FQG ++
Sbjct: 118 ADKKVEVVLSDMAPNTSGFSAVDQPRMIYLCELAMDFAEQVLPEGGTLVIKVFQGEGSDA 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+ +++ F KV +KP ASRA S EM+ +A
Sbjct: 178 LRKNMQQRFSKVRSIKPAASRARSKEMYWIATK 210
>gi|304310499|ref|YP_003810097.1| Cell division protein FtsJ [gamma proteobacterium HdN1]
gi|301796232|emb|CBL44440.1| Cell division protein FtsJ [gamma proteobacterium HdN1]
Length = 206
Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS WL H +DPYV++AQ +G+R+R+AYKLL+I EK +IL+ ++DLG++PG
Sbjct: 2 SRSKSSSRWLREHFDDPYVKKAQQDGYRSRAAYKLLEIQEKDRILKQGMTVLDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WSQVAAR G + V+A D L+M+P+ GV F + DF + + + + Q G DLV
Sbjct: 62 WSQVAARYVG---DAGHVIASDRLEMDPLYGVDFLQGDFCEEEVFAKLLQMTGNRGIDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G+R +D R M L E A A +L GG LVK FQG + + + H
Sbjct: 119 ISDMAPNMSGNRAVDQPRAMYLVELALDMATRVLKPGGSLLVKVFQGEGFDSLRKDMHTH 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+++ KP ASR+ S E + LAK +
Sbjct: 179 FRQLQTRKPDASRSRSAETYWLAKDY 204
>gi|297539174|ref|YP_003674943.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylotenera sp. 301]
gi|297258521|gb|ADI30366.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylotenera sp. 301]
Length = 206
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 87/207 (42%), Positives = 126/207 (60%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ W++ HIND +V+RAQ EG+RAR+AYKL +I++K ++++ IVDLGS+PGS
Sbjct: 2 KLKPSSKAWMHEHINDEFVKRAQKEGYRARAAYKLTEIDDKDKLIKPGMTIVDLGSTPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLV 139
WSQVA + R++A+D+L+MEPI GV+F + DF + E + G DLV
Sbjct: 62 WSQVAVQRLK---GQGRIIALDLLEMEPIKGVEFIQGDFREETILEILEKSLNGKQVDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
++DMA G +D L E A F+ E L G+FLVK F G +DI+ ++
Sbjct: 119 IADMAPNMSGITIVDQAGAAYLTELALEFSKEWLKPSGNFLVKVFIGEGFDDIVKNMRTI 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV+ KP ASR S E++LL G +
Sbjct: 179 FDKVVTRKPKASRGRSSEVYLLGLGRK 205
>gi|72110328|ref|XP_787303.1| PREDICTED: similar to cell division protein ftsj
[Strongylocentrotus purpuratus]
gi|115931468|ref|XP_001187092.1| PREDICTED: similar to cell division protein ftsj
[Strongylocentrotus purpuratus]
Length = 243
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 131/236 (55%), Gaps = 9/236 (3%)
Query: 1 MVKPPGSSSRRGLTQKVK--NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M P S G+ +K K ++ SS+ W+NRH+NDP+V++A+ + +RARSAYKLL+I
Sbjct: 1 MFSPTRSLHLSGVLRKKKPGLKNKSHSSQQWINRHVNDPFVKQARADSYRARSAYKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARIT-----GSNANNTRVVAIDILDMEPILGVK 113
+ ++++L+ ++D G++PGSW+QVA T V+A+D+L M+PI G
Sbjct: 61 DSRYRLLKPGNTVIDCGAAPGSWTQVAVERTNSALQNPAKPRGIVIAVDLLHMQPIEGAI 120
Query: 114 FFKFDFLDLDSWEFIR--QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
+ + D VLSDMA G +DH + ++L A FA +
Sbjct: 121 MLGQSDFTDPAVQERILGHLDKRLSDAVLSDMAPNATGIHAMDHEQIIALARTAMGFATK 180
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+L G FLVK + G T + L + F+ V ++P ASR ES E+FLLA+GF++
Sbjct: 181 VLCENGHFLVKLWDGHDTGLLKRDLVESFRSVKILRPEASRKESSEIFLLAQGFKR 236
>gi|160900358|ref|YP_001565940.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Delftia acidovorans
SPH-1]
gi|226703294|sp|A9BML0|RLME_DELAS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|160365942|gb|ABX37555.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Delftia acidovorans
SPH-1]
Length = 217
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 127/218 (58%), Gaps = 7/218 (3%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
KV +S + + + WLN H+NDPYV+ AQ +G+RAR+AYKL +I+E+ ++++ +VDL
Sbjct: 1 MKVNTKSKKVN-KAWLNSHVNDPYVKAAQKDGYRARAAYKLKEIDEQLKLIRPGATVVDL 59
Query: 75 GSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFI 128
GS+PG+WSQ R N R++++D+L MEPI GV+F DF + +
Sbjct: 60 GSTPGAWSQYVRRCLSPEGAAVGALNGRIISLDLLPMEPIEGVQFILGDFREEPVLAQLQ 119
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
GG D+V+SDMA G+ D R L E A F++ + G +VK F GG
Sbjct: 120 EALGGGKADVVVSDMAPNLSGNGTTDAARIALLVELAVDFSIHHMKPEGALVVKLFHGGA 179
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+D++ L ++ F+ V +KP +SR +S E FL+ G +
Sbjct: 180 YDDLVALFRQTFKVVKPIKPKSSRDKSSETFLVGMGLK 217
>gi|332977760|gb|EGK14520.1| ribosomal RNA large subunit methyltransferase J [Psychrobacter sp.
1501(2011)]
Length = 210
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N++ SS+ W+ H++D YVQ AQ EG+RAR+AYKLL+INEK +++ +V
Sbjct: 1 MATRITNKTLSKSSKAWMKEHLDDHYVQLAQKEGYRARAAYKLLEINEKTNLIKKGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QA 131
DLGS+PGSWSQVA R+ G + ++A DIL M+ + V F + DF + + ++ + +
Sbjct: 61 DLGSAPGSWSQVAGRLVG---DEGILIASDILPMDALENVTFIQGDFREEEVFDKLMGEV 117
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+VLSDMA T GH +D R + LCE A FAL +L GG ++K FQG
Sbjct: 118 GDRQVDVVLSDMAPNTSGHTAVDQPRMIYLCELAVDFALRVLPKGGSLVMKMFQGEGEQQ 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+ L+ F KV +KP ASR S E+F +A
Sbjct: 178 LRQQLQSQFSKVRTIKPAASRPRSKEVFWVATK 210
>gi|302879458|ref|YP_003848022.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gallionella
capsiferriformans ES-2]
gi|302582247|gb|ADL56258.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gallionella
capsiferriformans ES-2]
Length = 206
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 126/206 (61%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ W+ HINDP+VQ+AQ +G+R+R+AYKL++INEK +++ IVDLG++PG
Sbjct: 2 KPSKTSKQWMREHINDPFVQQAQKDGYRSRAAYKLIEINEKDHLIKPGMVIVDLGATPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
W QVA I G +V+A+D+L +EP+ GV+F + DF D + + +++ G P LV
Sbjct: 62 WCQVAGAIMGET---GKVIALDLLPLEPLRGVEFIQGDFRDEAVLKKLEESLQGKPVGLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D R++ L E A FA + L G FLVK FQG + L++
Sbjct: 119 ISDMAPNFSGVSAVDQDRSIYLAELAMEFAFDHLTRDGSFLVKVFQGTGFEAYMKLMRTK 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F +V+ KP ASR S E++LL G
Sbjct: 179 FTRVVARKPKASRDRSSEVYLLGTGK 204
>gi|294669674|ref|ZP_06734741.1| hypothetical protein NEIELOOT_01575 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308587|gb|EFE49830.1| hypothetical protein NEIELOOT_01575 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 248
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 91/206 (44%), Positives = 120/206 (58%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WLN H+ND YV +AQ +G+RAR+AYKLL+INEK +++Q + DLGS+PGSW
Sbjct: 46 RSKSSKAWLNEHVNDHYVHQAQKDGYRARAAYKLLEINEKDRLIQPGTVLADLGSAPGSW 105
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVL 140
SQVAA + G V A+DIL MEPI GV F + DF + + +G DLV+
Sbjct: 106 SQVAAELAGEKGA---VFALDILPMEPIAGVSFIQGDFREDEVLAQFESLLGDRLLDLVI 162
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
DMA GH D +++ LC+ A FA L G FLVK FQG + L ++ F
Sbjct: 163 CDMAPNMSGHAVTDQAKSLYLCKLALDFARNHLKTNGHFLVKVFQGAGYTEFLAEMRAAF 222
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR S E++LL + R
Sbjct: 223 SSVQTRKPGASRNRSSEIYLLGRNKR 248
>gi|119504342|ref|ZP_01626422.1| ribosomal RNA methyltransferase RrmJ/FtsJ [marine gamma
proteobacterium HTCC2080]
gi|119459850|gb|EAW40945.1| ribosomal RNA methyltransferase RrmJ/FtsJ [marine gamma
proteobacterium HTCC2080]
Length = 208
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SSR WL H D YVQRA EG+R+R+ YKL +IN++ ++++ ++DLG++PG
Sbjct: 3 KKRSSSRAWLKEHREDLYVQRAVKEGYRSRACYKLKEINDRDRVIKPGMTVLDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNPDLV 139
WSQVA + G+ RV+A DIL M+ + V+F DF + +E + D+V
Sbjct: 63 WSQVAVEMVGA---RGRVIASDILPMDSLADVEFILGDFTEEAVFEALLNLLGESAVDVV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R+M L E A A + L GG + K FQG ++ +++
Sbjct: 120 LSDMAPNMSGVSAVDQPRSMYLVELALDLATQTLEKGGTLVSKVFQGEGFEAVMSTARQN 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F +V+ KP ASR S E++L+A GF+
Sbjct: 180 FDRVLTRKPEASRPRSREVYLVASGFK 206
>gi|330981082|gb|EGH79185.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 204
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 85/205 (41%), Positives = 124/205 (60%), Gaps = 4/205 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
++ +WL H +D YV+ AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG W
Sbjct: 3 RSKTNHNWLKEHFDDKYVKMAQKDGYRSRASYKLLEIQEKDKLIRPGMTVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQV +R+ G R++A DIL+M+ I V F + DF + E I +A+G DLV+
Sbjct: 63 SQVTSRLIG---GQGRLIASDILEMDSIPDVTFIQGDFTEDAILEQILEAVGNTQVDLVI 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G +D R M LCE A A +L GGDFL+K FQG + ++K F
Sbjct: 120 SDMAPNMSGLSAVDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGFDVYHKDIRKLF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
KV KP +SR S E +LLA+GF
Sbjct: 180 DKVQMRKPSSSRDRSREQYLLARGF 204
>gi|119944572|ref|YP_942252.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Psychromonas ingrahamii
37]
gi|143461204|sp|A1ST38|RLME_PSYIN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|119863176|gb|ABM02653.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Psychromonas ingrahamii
37]
Length = 217
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 120/209 (57%), Gaps = 4/209 (1%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
+S SS+ W+ H+ND YV+ A +G R+R+ +KL +IN+K ++++S +VDLG++P
Sbjct: 11 KKSASASSKRWMYEHVNDFYVKEATKKGLRSRAVFKLEEINKKDKLIRSGMTVVDLGAAP 70
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-D 137
GSWSQ A G +V+A DIL M+ I GV F + DF + + I G+ D
Sbjct: 71 GSWSQWAVDTVGLK---GKVIACDILPMDSIAGVDFLQGDFREDAVVNALLARIAGHKVD 127
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
+VLSDM+ G ID ++M L E A E+L G F+VK F G + + +
Sbjct: 128 VVLSDMSPNMTGTVGIDQPKSMYLVELALEMCKEVLVKEGSFVVKVFMGSEFDLFMSEAR 187
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F+ V KP +SR+ S E++++A G++
Sbjct: 188 KCFKSVKTRKPDSSRSRSREVYVVATGYK 216
>gi|262401666|ref|ZP_06078232.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio sp. RC586]
gi|262352083|gb|EEZ01213.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio sp. RC586]
Length = 209
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 121/211 (57%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L++ +VDLG+
Sbjct: 1 MSKQKHSASSTRWLKEHFDDKYANEARKKGFRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ AA++ G ++ RV+A D+L ME I GV F + DF + + + I
Sbjct: 61 APGGWSQFAAKVVG---DSGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLERIQPEM 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG +D +
Sbjct: 118 VDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR+ S E+F++A G++
Sbjct: 178 VRDLFKAVKIRKPDSSRSRSREVFIVATGYK 208
>gi|329120415|ref|ZP_08249081.1| ribosomal RNA large subunit methyltransferase J [Neisseria
bacilliformis ATCC BAA-1200]
gi|327462099|gb|EGF08427.1| ribosomal RNA large subunit methyltransferase J [Neisseria
bacilliformis ATCC BAA-1200]
Length = 228
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 90/210 (42%), Positives = 126/210 (60%), Gaps = 4/210 (1%)
Query: 18 KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSS 77
+ + SS+ WL H+ND YV +AQ +G+RAR+AYKLL+INEK ++++ + DLGS+
Sbjct: 22 QMAARSKSSKAWLREHVNDHYVHQAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSA 81
Query: 78 PGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
PGSWSQ AA++ G++ +V A+DIL MEP+ GV F + DF + D + +GG
Sbjct: 82 PGSWSQAAAKLAGAS---GKVFALDILPMEPVDGVSFVQGDFREADVLARFEELLGGRAL 138
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLV+ DMA GH D +++ LC+ A FA L GG FLVK FQG + +
Sbjct: 139 DLVICDMAPNMSGHSVTDQAKSLCLCQLALDFARCRLKPGGSFLVKAFQGAGYPEFTAQM 198
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E +LL K R
Sbjct: 199 RETFATVQTRKPDASRGRSSETYLLGKNKR 228
>gi|239815604|ref|YP_002944514.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Variovorax paradoxus
S110]
gi|259494572|sp|C5CKU4|RLME_VARPS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|239802181|gb|ACS19248.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Variovorax paradoxus
S110]
Length = 222
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 84/220 (38%), Positives = 122/220 (55%), Gaps = 9/220 (4%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
++ K K++ ++ WL+ HINDPYV+ A EG+RAR+AYKL +I+E +++ + +V
Sbjct: 1 MSTKAKSKKV---NKAWLHDHINDPYVKLATREGYRARAAYKLKEIDESLGLVKPGQLVV 57
Query: 73 DLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF 127
DLGS+PG+WSQ R N ++A+DIL MEPI GV F + DF + + E
Sbjct: 58 DLGSTPGAWSQYLRRRMSPEGAAAGELNGTIIALDILPMEPIEGVTFLQGDFREAELLEQ 117
Query: 128 IRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
+ + G DLV+SDMA G D R L E A FA L G + K F G
Sbjct: 118 VLGVLAGRKADLVVSDMAPNLSGIHSADAARVAHLIELAIDFAQHHLKPEGALVAKLFHG 177
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++++ L K +F+ V KP ASR +S E FL+ G +
Sbjct: 178 SGYDELVKLFKANFRTVKPFKPKASRDKSSETFLVGMGLK 217
>gi|257095284|ref|YP_003168925.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047808|gb|ACV36996.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 206
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 89/207 (42%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS WL H++D YVQRA+ EG+R+R+AYKL+ I++ +L+S IVDLG+SPG
Sbjct: 2 NRSASSNRWLREHVSDAYVQRARAEGYRSRAAYKLMAIDDTDHLLRSGDVIVDLGASPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVAAR RV+A+D+L+MEP+ V F + DF + D + + G LV
Sbjct: 62 WSQVAARRLQGG---GRVIAVDLLEMEPLRDVTFLQGDFREPDVIGRLETILAGKKVGLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDM+ G D R M L E FA + L G FLVK FQG +D L ++K
Sbjct: 119 LSDMSPNISGIAVCDQARGMHLAELGLEFACKWLKPEGAFLVKVFQGHGFDDFLAAMRKA 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP ASR S E++LL K +
Sbjct: 179 FKSVASRKPDASRDRSPEIYLLGKTLK 205
>gi|52842994|ref|YP_096793.1| ribosomal RNA large subunit methyltransferase J [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|52630105|gb|AAU28846.1| ribosomal RNA large subunit methyltransferase J [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 247
Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WL H +D YV++AQ EG+R+R+ YKL +I++K +++ +VDLG++PG
Sbjct: 43 NRTKSSKRWLQEHFDDVYVKKAQAEGYRSRAVYKLKEIDDKESLIKPGMTVVDLGAAPGG 102
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
W+Q A+ + R+VA+DIL M+ + V+F DF + + + + I DL+
Sbjct: 103 WTQYASEKMRGS---GRLVALDILPMDALPNVEFILGDFREDNVLQELINLIPQRTLDLL 159
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G ID R M L E A FA +ML GG+ LVK F G ++++ +
Sbjct: 160 LSDMAPNMSGSSAIDIPRAMYLVELAFDFAEKMLKPGGNMLVKIFHGSGFDELVKQARAS 219
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KV+ KP ASR+ S E +LLAKG+
Sbjct: 220 FEKVVIRKPSASRSRSKETYLLAKGY 245
>gi|222110672|ref|YP_002552936.1| ribosomal RNA methyltransferase rrmj/ftsj [Acidovorax ebreus TPSY]
gi|221730116|gb|ACM32936.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidovorax ebreus TPSY]
Length = 220
Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 129/219 (58%), Gaps = 7/219 (3%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
K + +S + + + WL+ H+ND YV+ AQ EG+RAR+AYKL +I+E+ +++ +VDL
Sbjct: 1 MKAQTKSKKVN-KAWLHDHVNDTYVKLAQKEGYRARAAYKLKEIDEQLGLIKPGHVVVDL 59
Query: 75 GSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
GSSPG+WSQ R + N ++A+DIL MEPI GV F + DF + + ++
Sbjct: 60 GSSPGAWSQYVRRRLSPDGAAVGQLNGVIIALDILPMEPIEGVTFLQGDFREEEVLARLQ 119
Query: 130 QAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
+A+ G P D+V+SDMA G +D +R L E A FA+ L G +VK F G
Sbjct: 120 EAVQGRPVDVVVSDMAPNLSGVESVDAVRIAHLIELAVDFAVHHLKPEGALVVKLFHGSG 179
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ ++ L K F+ V +KP ASR +S E FL+ G ++
Sbjct: 180 YSQLVQLFKDTFRVVKPMKPKASRDKSSETFLVGMGLKR 218
>gi|270158120|ref|ZP_06186777.1| putative ribosomal RNA large subunit methyltransferase J
[Legionella longbeachae D-4968]
gi|289163615|ref|YP_003453753.1| Ribosomal RNA large subunit methyltransferase (Cell division
protein FtsJ) [Legionella longbeachae NSW150]
gi|269990145|gb|EEZ96399.1| putative ribosomal RNA large subunit methyltransferase J
[Legionella longbeachae D-4968]
gi|288856788|emb|CBJ10599.1| Ribosomal RNA large subunit methyltransferase (Cell division
protein FtsJ) [Legionella longbeachae NSW150]
Length = 206
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 120/206 (58%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS+ WL H +D YV++AQ EG+R+R+ YKL ++++K +L+ +VDLG++PG
Sbjct: 2 KRTKSSKRWLQEHFDDVYVKKAQAEGYRSRAVYKLKEVDDKESLLKPGMTVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
W+Q + R++A+DIL M+ + V F DF + + + + I DL+
Sbjct: 62 WTQYVSEQLK---GCGRIIALDILPMDALPDVDFILGDFREEEVLQKLINLIPERSVDLL 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G + ID R M L E A FA +ML GG L+K F G +D++ +
Sbjct: 119 LSDMAPNMSGSKAIDIPRAMYLVELAFDFAEKMLKPGGAMLIKVFHGSGFDDLVKQARIS 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KV+ KP+ASRA S E +LLAKG+
Sbjct: 179 FEKVVIRKPMASRARSKETYLLAKGY 204
>gi|253999580|ref|YP_003051643.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylovorus sp. SIP3-4]
gi|253986259|gb|ACT51116.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylovorus sp. SIP3-4]
Length = 207
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 79/207 (38%), Positives = 122/207 (58%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ W+ H+ND +V+RAQ +G+RAR+AYKL++I++K Q+++ IVDLG++PGS
Sbjct: 2 KRTRTSKGWMQEHVNDEFVKRAQRDGYRARAAYKLMEIDDKDQLIKPGMTIVDLGATPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLV 139
WSQVA + R++A+D+L+M I GV F + DF + + + DLV
Sbjct: 62 WSQVAVQRLK---GQGRIIALDLLEMAAIPGVDFIQGDFREDAVLFQLEEKLNNRPIDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
++DMA G +D L E A F+L+ L GG+FLVK F G ++I+ ++
Sbjct: 119 IADMAPNISGISSVDQANAAYLTELALEFSLKWLKPGGNFLVKVFIGSGFDEIMKTMRLG 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV+ KP ASR S E++LL +
Sbjct: 179 FDKVVTRKPKASRDRSSEVYLLGLKRK 205
>gi|307546735|ref|YP_003899214.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas elongata DSM
2581]
gi|307218759|emb|CBV44029.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomonas elongata DSM
2581]
Length = 225
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 90/227 (39%), Positives = 130/227 (57%), Gaps = 4/227 (1%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
M S + + R + W+ H +D YVQ++ +G+R+R++YKLL ++E
Sbjct: 1 MASSHDSRPKDARAKGAARRGGKKPRTGWMKEHFDDRYVQQSWQDGYRSRASYKLLALDE 60
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
K ++L+ ++DLG++PG WSQVAA G + RV+A DIL+M+ + GV F + DF
Sbjct: 61 KDRLLRPGMTVIDLGAAPGGWSQVAAEKVG---DEGRVIASDILEMDALAGVDFVQGDFT 117
Query: 121 DLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+ E I IG P DLV+SDMA G ID + M L E A A + L+ GG F
Sbjct: 118 EDSVLEEILARIGDRPVDLVMSDMAPNMSGMAAIDQPQAMYLVELALDLARQTLSPGGVF 177
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L K FQG + L L+ F++V+ KP ASRA S E++LLA+GFR
Sbjct: 178 LAKVFQGEGFDAYLKELRAGFKRVVTRKPEASRARSREVYLLAEGFR 224
>gi|332307115|ref|YP_004434966.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174444|gb|AEE23698.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 209
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ SS+ WL H +D YV +A+ +G R+R+ +KL +I K +++ +VDLG+
Sbjct: 1 MGKNKQSESSKRWLKEHFDDKYVIQAKKQGLRSRAVFKLEEIQAKDSLIKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ A + G + + V+A DIL M+P+LGV F DF + + + + G N
Sbjct: 61 APGGWSQYAVKQVGESGH---VIACDILAMDPLLGVDFLMGDFREEAVLDTLLNKIGGKN 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ D ++M L E + ++L G + VK F G +
Sbjct: 118 VDVVMSDMAPNMTGNDTADQAKSMYLVELSLDMCRQVLKKNGSYTVKVFMGEGFDQFFHE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+K F+ V KP +SRA S E++L+A GF+
Sbjct: 178 VKSAFKVVKTRKPDSSRARSREVYLVATGFK 208
>gi|238750119|ref|ZP_04611622.1| Ribosomal RNA large subunit methyltransferase J [Yersinia rohdei
ATCC 43380]
gi|238711663|gb|EEQ03878.1| Ribosomal RNA large subunit methyltransferase J [Yersinia rohdei
ATCC 43380]
Length = 209
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 72/199 (36%), Positives = 112/199 (56%), Gaps = 4/199 (2%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
WL H +D YV +AQ +G R+R+ +KL +I + ++ + +VDLG++PG WSQ
Sbjct: 13 WLQEHFSDKYVIQAQKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGAAPGGWSQYVVTQ 72
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYPT 147
G R++A D+L M+PI+GV F + DF D + + + + +V+SDMA
Sbjct: 73 IGGK---GRIIACDLLPMDPIVGVDFLQGDFTDEQVLKALLERVGDKKVQVVMSDMAPNM 129
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G +D ++M L E A ++L GG FLVK FQG ++ L ++ F KV K
Sbjct: 130 SGTPAVDIPKSMYLVELALDMCRDVLAPGGSFLVKVFQGDGFDEYLREIRSLFTKVKIRK 189
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASRA S E++++A G +
Sbjct: 190 PDASRARSREVYIVATGRK 208
>gi|300113259|ref|YP_003759834.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosococcus watsonii
C-113]
gi|299539196|gb|ADJ27513.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosococcus watsonii
C-113]
Length = 212
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 79/208 (37%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ S WL H D YV +A+ +G+R+R+ +KL QI+ + ++L IVDLG++PG
Sbjct: 3 KRKSHSARWLREHFRDSYVTQAKAQGYRSRAVFKLQQIDARERLLCPGSVIVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLV 139
WSQ AA G +V+A+DIL M P GV+F + DF + + E DLV
Sbjct: 63 WSQWAADRVGE---RGQVIALDILPMLPYPGVRFIQGDFREDNILVELQNTLTDCAVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D R + L E A FA E L G FL+KTFQG + + ++++
Sbjct: 120 MSDMAPNMSGMAAVDQPRVIYLGELALAFAQESLGPEGSFLLKTFQGEGFDTLYEVIRQD 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F +V KP ASR S E++++A+ RK
Sbjct: 180 FSQVRIHKPPASRGRSREVYIVARRSRK 207
>gi|110833182|ref|YP_692041.1| ribosomal RNA large subunit methyltransferase J [Alcanivorax
borkumensis SK2]
gi|123345833|sp|Q0VSS9|RLME_ALCBS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|110646293|emb|CAL15769.1| ribosomal RNA large subunit methyltransferase J [Alcanivorax
borkumensis SK2]
Length = 208
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ S +S+ WL H NDP+V +AQ +G+R+R+++KLL++NEK ++ + ++DLG+
Sbjct: 1 MAKSSRSKTSKAWLKEHFNDPWVAKAQEQGYRSRASFKLLEMNEKDRLFRPGMAVLDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI-RQAIGGN 135
+PG WSQVA ++ G V+A DIL M+ + V F + DF + +E I
Sbjct: 61 APGGWSQVAGQLIG---GRGTVIASDILAMDALPDVTFIEGDFREEVIYEQILMALGDQR 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G+ +D R M L E A A +L G FLVK FQG D
Sbjct: 118 ADLVMSDMAPNMSGNSAVDQPRAMYLAELALDMAERVLEPDGVFLVKVFQGEGFEDYRKA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+ F++V+ KP ASRA S E++ L G +
Sbjct: 178 LQSRFKRVVSRKPAASRARSTEVYQLGFGLK 208
>gi|143459181|sp|A1W8H0|RLME_ACISJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
Length = 220
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 122/219 (55%), Gaps = 7/219 (3%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
K + +S + + + WL+ H+ND YV+ AQ EG+RAR+AYKL +I+E+ +++ +VDL
Sbjct: 1 MKAQTKSKKVN-KAWLHDHVNDTYVKLAQKEGYRARAAYKLKEIDEQLGLIKPGHVVVDL 59
Query: 75 GSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FI 128
GSSPG+WSQ R + N ++A+DIL MEPI GV F + DF + +
Sbjct: 60 GSSPGAWSQYVRRRLSPDGAAVGQLNGVIIALDILPMEPIEGVTFLQGDFREEEVLAGLQ 119
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
D+V+SDMA G +D +R L E A FA+ L G +VK F G
Sbjct: 120 EAVQARPVDVVVSDMAPNLSGVESVDAVRIAHLIELAVDFAVHHLKPEGALVVKLFHGSG 179
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ ++ L K F+ V +KP ASR +S E FL+ G ++
Sbjct: 180 YSQLVQLFKDTFRVVKPMKPKASRDKSSETFLVGMGLKR 218
>gi|56460084|ref|YP_155365.1| 23S rRNA methyltransferase J [Idiomarina loihiensis L2TR]
gi|81362904|sp|Q5QXK8|RLME_IDILO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56179094|gb|AAV81816.1| 23S rRNA methylase [Idiomarina loihiensis L2TR]
Length = 208
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS+ WL H +D +VQ+AQ +G R+R+ +KL +I ++ ++++ + +VDLG++PG
Sbjct: 3 KKRSVSSQRWLKEHFDDQFVQKAQKKGLRSRAVFKLEEIQKRDKLIKKGQTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
WSQ A + +++A DIL M+PI GV F + DF + E + + IGG D+
Sbjct: 63 GWSQYVADYFN---GDGQIIACDILAMDPIAGVDFLQGDFREESVLEALLERIGGKNVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G+ +D R+M L E A ++L GG F VK FQG L ++
Sbjct: 120 VLSDMAPNMSGNGTVDQARSMYLVELALDMCHQVLKPGGSFAVKVFQGQGFESFLKDVRA 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP +SRA S E++L+A ++
Sbjct: 180 AFNDVKTRKPESSRARSREVYLVATDYK 207
>gi|145641635|ref|ZP_01797212.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae R3021]
gi|145273682|gb|EDK13551.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae 22.4-21]
Length = 209
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-N 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + + + +G
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLERVGEAK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPCAMYLVELALDMCKQVLANKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFNVVKVRKPEASRGRSREVYIVATGYK 208
>gi|145632764|ref|ZP_01788497.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae 3655]
gi|144986420|gb|EDJ92986.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae 3655]
Length = 211
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 72/212 (33%), Positives = 116/212 (54%), Gaps = 4/212 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLERVGEDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ F V KP ASR S E++++A G+++
Sbjct: 178 IRSLFNVVKVRKPEASRGRSREVYIVATGYKE 209
>gi|308448693|ref|XP_003087724.1| hypothetical protein CRE_21701 [Caenorhabditis remanei]
gi|308253263|gb|EFO97215.1| hypothetical protein CRE_21701 [Caenorhabditis remanei]
Length = 207
Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 4/210 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ ++ N+ SSR W+ H++DP+V++AQ EG+RAR+AYKLL+I EKH++++ +V
Sbjct: 1 MATRITNQKLSKSSRAWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKHKMIKPGMTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG++PGSWSQ+A ++ G V+A DIL+M+ + V F + DF + + +E + +
Sbjct: 61 DLGAAPGSWSQIAGKLVGDK---GLVIASDILEMDALPDVTFLQGDFREEEVFEKLLNIL 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+V+SDMA T G+R +D R + LCE A FA ++L G FLVK FQG ++
Sbjct: 118 NGRTVDVVISDMAPNTSGNRAVDQPRQIYLCELALDFANKVLGPKGQFLVKVFQGTGFDE 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
F + KP ASRA S E+FL+
Sbjct: 178 FRKHFVDIFDVLKTAKPAASRARSKEVFLI 207
>gi|198284444|ref|YP_002220765.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218665397|ref|YP_002427111.1| ribosomal RNA large subunit methyltransferase J [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|226703276|sp|B7J8G6|RLME_ACIF2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703277|sp|B5ENR5|RLME_ACIF5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|198248965|gb|ACH84558.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218517610|gb|ACK78196.1| ribosomal RNA large subunit methyltransferase J [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 219
Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 3/205 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL H DP+VQRA EG+R+R++YKLL+I +K +++ R++D+G++PG W
Sbjct: 3 RSKSSEKWLKEHFKDPFVQRAMKEGYRSRASYKLLEIQQKDHLIRPGMRVLDVGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
+QVAA + G R+VA+D L M+P+ D D ++A+ G DL++S
Sbjct: 63 TQVAAPLIGRK---GRLVAVDRLAMDPVADATVICGDVYDDAILAACQEALPGGADLIMS 119
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
DMA G +D R + L E A A L GG L+K F G ++ L++ F+
Sbjct: 120 DMAPNMSGIASVDQARAIDLAELALDMAHRWLVPGGALLIKVFMGSGAEELRRALRRDFK 179
Query: 202 KVIHVKPVASRAESVEMFLLAKGFR 226
K++ KP ASRA S E + LA F+
Sbjct: 180 KIVVRKPEASRARSTEQYWLALDFQ 204
>gi|124266460|ref|YP_001020464.1| putative ribosomal RNA large subunit methyltransferase J
[Methylibium petroleiphilum PM1]
gi|158512857|sp|A2SF90|RLME_METPP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|124259235|gb|ABM94229.1| putative ribosomal RNA large subunit methyltransferase J
[Methylibium petroleiphilum PM1]
Length = 224
Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats.
Identities = 90/223 (40%), Positives = 126/223 (56%), Gaps = 12/223 (5%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
KVK +S + + + WLN HINDPYV+ AQ EG+RAR+AYKL +I+E +++ + +VDL
Sbjct: 1 MKVKTKSKKVN-KAWLNDHINDPYVKLAQKEGYRARAAYKLKEIDEALGLIKPGQVVVDL 59
Query: 75 GSSPGSWSQVAARITGSNA----------NNTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
G++PG+WSQ R N R++A+D+LD EPI GV+F + DF D
Sbjct: 60 GAAPGAWSQYLRRRFAPKEAGTGGAAAGALNGRIIALDLLDFEPIEGVQFIQGDFHDEAV 119
Query: 125 WEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ AIGG D+V+SDMA G D R L E A FA L+ G + K
Sbjct: 120 LAELSAAIGGRGVDVVVSDMAPNLSGIASSDSARIALLVELAVEFAETHLHPHGALVCKV 179
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F G + ++ L KK F+ V +KP ASR +S E FL+ G +
Sbjct: 180 FHGSGHSQLVELFKKRFRVVKPIKPKASRDKSSETFLVGIGLK 222
>gi|261212253|ref|ZP_05926539.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio sp. RC341]
gi|260838861|gb|EEX65512.1| cell division protein FtsJ/ribosomal RNA large subunit
methyltransferase J [Vibrio sp. RC341]
Length = 209
Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 121/211 (57%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L++ +VDLG+
Sbjct: 1 MSKQKHSASSTRWLKEHFDDKYANEARKKGFRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ AA++ G ++ RV+A D+L ME I GV F + DF + + + I
Sbjct: 61 APGGWSQFAAKVVG---DSGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLERIQPEM 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG +D +
Sbjct: 118 VDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAQNGSFVVKVFQGEGFDDYVKA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR+ S E+F++A G++
Sbjct: 178 VRDLFKVVKIRKPDSSRSRSREVFIVATGYK 208
>gi|56478166|ref|YP_159755.1| cell division protein FtsJ [Aromatoleum aromaticum EbN1]
gi|81356990|sp|Q5P1G0|RLME_AROAE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56314209|emb|CAI08854.1| cell division protein FtsJ [Aromatoleum aromaticum EbN1]
Length = 207
Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 83/207 (40%), Positives = 125/207 (60%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ W+ H+NDPYVQRA+ EG+R+R+A+KL++++++ ++++S +VDLG++PGS
Sbjct: 2 KRTKTSKAWMQEHVNDPYVQRAKSEGYRSRAAFKLIELDDRDRLMRSGMVVVDLGAAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQVA R G RV A+D+L ++P+ GV+F + DF + + +GG D+V
Sbjct: 62 WSQVALRRVGRE---GRVFALDLLPLDPLGGVEFIQGDFQEEPVLAELESRLGGLPVDVV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G D R++ L E A FA L GG F+VK FQG + KH
Sbjct: 119 LSDMAPNMSGIDTTDQARSIYLGELALEFAGHHLKPGGGFVVKVFQGQGFMEYRNEAAKH 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F + KP ASR S E++L+ G+R
Sbjct: 179 FHALHVRKPKASRDRSAEVYLVGVGYR 205
>gi|88606902|ref|YP_505099.1| ribosomal RNA large subunit methyltransferase J [Anaplasma
phagocytophilum HZ]
gi|123495326|sp|Q2GKK2|RLME_ANAPZ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|88597965|gb|ABD43435.1| ribosomal RNA large subunit methyltransferase J [Anaplasma
phagocytophilum HZ]
Length = 247
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 127/214 (59%), Gaps = 3/214 (1%)
Query: 15 QKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVD 73
+VK + + SS +W+ R +ND YV A+ EG+R+RSAYKL++IN+K +ILQ R ++D
Sbjct: 34 VRVKTAKGRKISSTNWIRRQVNDQYVSLAKKEGYRSRSAYKLIEINDKFKILQRGRFVLD 93
Query: 74 LGSSPGSWSQVAARITG-SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
LGSSPG W+QVA++ T ++ VVA+DI M+ I V F + D +
Sbjct: 94 LGSSPGGWAQVASKNTAIIDSTEPTVVAVDIQSMKDIHNVSFVQCDIDSDHDL-LNEKLS 152
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G D+VLSDMA + GHR++DH ++LCE A ALE LN G F+ K G +
Sbjct: 153 GRKFDVVLSDMAPKSCGHRQVDHANIINLCELARDIALEYLNPNGSFVTKLLHGEYEQEF 212
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ HF V + KP +SR +S E++L+A F+
Sbjct: 213 RRSIMTHFGVVSYFKPKSSRKDSSEIYLVALKFK 246
>gi|21231165|ref|NP_637082.1| cell division protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66768827|ref|YP_243589.1| cell division protein [Xanthomonas campestris pv. campestris str.
8004]
gi|21112804|gb|AAM41006.1| cell division protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574159|gb|AAY49569.1| cell division protein [Xanthomonas campestris pv. campestris str.
8004]
Length = 212
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 124/207 (59%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H DP+V++AQ EG R+R+AYKL ++ ++ ++L+ +VDLG++PG
Sbjct: 5 SRSKSSQRWLKEHFADPFVKKAQAEGMRSRAAYKLEELLQRDRLLKPGMVVVDLGAAPGG 64
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQ + G++ RVVA+DIL+M P+ GV+F DF + +G DLV
Sbjct: 65 WSQQVRKSMGAS---GRVVALDILEMPPLAGVEFLHGDFREQAVLSEFEAMLGDVPVDLV 121
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L +GG FL+K FQG ++D + L++
Sbjct: 122 LSDMAPNKSGMDAVDQPRMMHLAELAMEFADTHLKVGGAFLIKLFQGVGSDDYIRELRRR 181
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
++KV KP ASR S E+++L +G R
Sbjct: 182 YEKVTIRKPAASRKRSAEVYVLGQGKR 208
>gi|294787781|ref|ZP_06753025.1| ribosomal RNA large subunit methyltransferase J [Simonsiella
muelleri ATCC 29453]
gi|294484074|gb|EFG31757.1| ribosomal RNA large subunit methyltransferase J [Simonsiella
muelleri ATCC 29453]
Length = 195
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 92/198 (46%), Positives = 122/198 (61%), Gaps = 4/198 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+N H+NDPYVQRAQ +G+RAR+AYKLL+INEK +I++ N + DLGS+PGSWSQVA ++
Sbjct: 1 MNEHVNDPYVQRAQKDGYRARAAYKLLEINEKDKIIKPNTVLADLGSAPGSWSQVAIKLV 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTI 148
G +V A+DIL ME I GV+F + DF + D + P DLV+ DMA
Sbjct: 61 G---KQGKVFALDILPMEHIDGVQFIQGDFREADVLAQFESLLENRPLDLVICDMAPNMS 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+ +D R+ LCE A F+ L GG FLVK FQG + L +++ F V KP
Sbjct: 118 GNAVMDQARSYYLCELALDFSQNHLKTGGCFLVKVFQGSGYQEYLTAMRETFTVVQTRKP 177
Query: 209 VASRAESVEMFLLAKGFR 226
ASR S E++LL K R
Sbjct: 178 DASRNRSSEIYLLGKNKR 195
>gi|145630774|ref|ZP_01786552.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae R3021]
gi|144983656|gb|EDJ91116.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae R3021]
Length = 209
Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLERVGEDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFNVVKVRKPEASRGRSREVYIVATGYK 208
>gi|188991942|ref|YP_001903952.1| Cell division protein FtsJ [Xanthomonas campestris pv. campestris
str. B100]
gi|83305668|sp|Q4UTQ4|RLME_XANC8 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83305669|sp|Q8P9Y1|RLME_XANCP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705321|sp|B0RTZ3|RLME_XANCB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|167733702|emb|CAP51907.1| Cell division protein FtsJ [Xanthomonas campestris pv. campestris]
Length = 210
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 124/207 (59%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H DP+V++AQ EG R+R+AYKL ++ ++ ++L+ +VDLG++PG
Sbjct: 3 SRSKSSQRWLKEHFADPFVKKAQAEGMRSRAAYKLEELLQRDRLLKPGMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQ + G++ RVVA+DIL+M P+ GV+F DF + +G DLV
Sbjct: 63 WSQQVRKSMGAS---GRVVALDILEMPPLAGVEFLHGDFREQAVLSEFEAMLGDVPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L +GG FL+K FQG ++D + L++
Sbjct: 120 LSDMAPNKSGMDAVDQPRMMHLAELAMEFADTHLKVGGAFLIKLFQGVGSDDYIRELRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
++KV KP ASR S E+++L +G R
Sbjct: 180 YEKVTIRKPAASRKRSAEVYVLGQGKR 206
>gi|145629419|ref|ZP_01785217.1| cell division protein [Haemophilus influenzae 22.1-21]
gi|145634955|ref|ZP_01790662.1| cell division protein [Haemophilus influenzae PittAA]
gi|144978262|gb|EDJ88026.1| cell division protein [Haemophilus influenzae 22.1-21]
gi|145267821|gb|EDK07818.1| cell division protein [Haemophilus influenzae PittAA]
gi|309750887|gb|ADO80871.1| 23S rRNA U2552 ribose 2-O-methyltransferase, SAM-dependent
[Haemophilus influenzae R2866]
Length = 209
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLARVGEDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLANKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFNVVKVRKPEASRGRSREVYIVATGYK 208
>gi|309973146|gb|ADO96347.1| 23S rRNA U2552 ribose 2-O-methyltransferase, SAM-dependent
[Haemophilus influenzae R2846]
Length = 209
Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLARVGEDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLATKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFNVVKVRKPEASRGRSREVYIVATGYK 208
>gi|319897097|ref|YP_004135292.1| 23S rRNA methyltransferase [Haemophilus influenzae F3031]
gi|317432601|emb|CBY80962.1| 23S rRNA methyltransferase [Haemophilus influenzae F3031]
Length = 209
Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLACVGEDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFNVVKVRKPEASRGRSREVYIVATGYK 208
>gi|68250003|ref|YP_249115.1| 23S rRNA methyltransferase J [Haemophilus influenzae 86-028NP]
gi|229847493|ref|ZP_04467590.1| 23S rRNA methyltransferase J [Haemophilus influenzae 7P49H1]
gi|81335573|sp|Q4QKJ2|RLME_HAEI8 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|68058202|gb|AAX88455.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae 86-028NP]
gi|229809634|gb|EEP45361.1| 23S rRNA methyltransferase J [Haemophilus influenzae 7P49H1]
Length = 209
Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-N 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + + + +G
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLERVGEAK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFNVVKVRKPEASRGRSREVYIVATGYK 208
>gi|289662669|ref|ZP_06484250.1| cell division protein FtsJ [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669632|ref|ZP_06490707.1| cell division protein FtsJ [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 210
Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 86/207 (41%), Positives = 121/207 (58%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H DPYV++AQ EG R+R+AYKL ++ ++ ++L+ +VDLG++PG
Sbjct: 3 SRSKSSQRWLKEHFADPYVKKAQAEGMRSRAAYKLEELLQRDRLLKPGMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQ + G ++ RVVA+DILDM + GV+F DF + +G DLV
Sbjct: 63 WSQQVRKSMG---DSGRVVALDILDMPALAGVEFLHGDFREQAVLSQFEALLGDVPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L GG FL+K FQG ++D + L++
Sbjct: 120 LSDMAPNKSGMDAVDQPRMMHLAELAMEFADTHLKPGGAFLIKLFQGVGSDDYIRELRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
++KV KP ASR S E++ L +G R
Sbjct: 180 YEKVTIRKPAASRKRSPEVYALGQGKR 206
>gi|16273244|ref|NP_439485.1| 23S rRNA methyltransferase J [Haemophilus influenzae Rd KW20]
gi|260581320|ref|ZP_05849136.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae RdAW]
gi|1169755|sp|P45162|RLME_HAEIN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=Cell division protein ftsJ homolog;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|1574792|gb|AAC22978.1| cell division protein (ftsJ) [Haemophilus influenzae Rd KW20]
gi|260091987|gb|EEW75934.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae RdAW]
Length = 209
Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLARVGEDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFDVVKVRKPEASRGRSREVYIVATGYK 208
>gi|121607215|ref|YP_995022.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Verminephrobacter
eiseniae EF01-2]
gi|143462104|sp|A1WEE7|RLME_VEREI RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|121551855|gb|ABM56004.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Verminephrobacter
eiseniae EF01-2]
Length = 242
Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 128/214 (59%), Gaps = 5/214 (2%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
KVK RS + + + WL++H+NDPYVQRA+ EG+RAR+AYKL +I+E+ +++ +VDL
Sbjct: 1 MKVKTRSKKVN-KAWLDQHVNDPYVQRARKEGYRARAAYKLREIDEQLGLIRPGYTVVDL 59
Query: 75 GSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG 134
G++PG+WSQ R + ++A+DIL MEP+ GV DF D + + QA+ G
Sbjct: 60 GATPGAWSQYLRRRMAAEGA---IIALDILPMEPLEGVTCLHGDFRAPDVQQRLEQALAG 116
Query: 135 N-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDIL 193
D+V+SDMA G D R L E A F+ L G LVK F G +D+
Sbjct: 117 RVVDVVVSDMAPNLSGIACADAARMADLVELAVAFSCRHLKPDGALLVKLFHGSGYSDLA 176
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L K+ F +V+ +KP ASR +S E FLL +G +K
Sbjct: 177 ALFKQTFLRVVPLKPKASRDKSSETFLLGRGLKK 210
>gi|254427497|ref|ZP_05041204.1| ribosomal RNA large subunit methyltransferase J [Alcanivorax sp.
DG881]
gi|196193666|gb|EDX88625.1| ribosomal RNA large subunit methyltransferase J [Alcanivorax sp.
DG881]
Length = 208
Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ S +S+ WL H NDP+V +AQ +G+R+R+++KLL+++EK ++ + ++DLG+
Sbjct: 1 MAKSSRSKTSKAWLKEHFNDPWVAKAQEQGYRSRASFKLLEMHEKDRLFRPGMTVLDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGN 135
+PG WSQVA ++ G V+A DIL M+ + V F + DF + +E I
Sbjct: 61 APGGWSQVAGQLIGGKGT---VIASDILAMDALPDVTFIEGDFREDAIYEQILASLGDRR 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G+ +D R M L E A A +L G FLVK FQG D
Sbjct: 118 ADLVMSDMAPNMSGNSAVDQPRAMYLAELALDMAERVLEPDGLFLVKVFQGEGFEDYRKA 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+ F++V+ KP ASRA S E++ L G +
Sbjct: 178 LQSRFKRVVSRKPAASRARSTEVYQLGFGLK 208
>gi|294340419|emb|CAZ88800.1| putative Ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552
methyltransferase) (Cell division protein ftsJ)
[Thiomonas sp. 3As]
Length = 216
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 2/213 (0%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + S+ WL H+NDPYV+ AQ EG+RAR+AYKL +I+E +L+ + +VDLGS
Sbjct: 1 MSSAKKNKFSKAWLQDHLNDPYVKMAQREGYRARAAYKLKEIDEAEGLLRPGQIVVDLGS 60
Query: 77 SPGSWSQVAA-RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN 135
+PGSWSQ A R+ A ++++D+L MEP+ V F DF + + + G
Sbjct: 61 TPGSWSQYARNRLMRGGAVQGTILSLDLLPMEPVPDVHFLLGDFREEAVVNQLEALLEGR 120
Query: 136 P-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D+VLSDMA G D R L E A FA L G ++KTF G + I+
Sbjct: 121 KVDVVLSDMAPNLTGIPSADAARIEHLSELALDFAQRWLQPQGAMVIKTFHGSYYSQIVK 180
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K FQ+V VKP ASR +S E F+LA+ +K
Sbjct: 181 AFKLVFQQVKAVKPQASRDKSAETFILARTLKK 213
>gi|21242480|ref|NP_642062.1| cell division protein [Xanthomonas axonopodis pv. citri str. 306]
gi|78047320|ref|YP_363495.1| cell division protein FtsJ [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|294626637|ref|ZP_06705234.1| cell division protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|294665640|ref|ZP_06730917.1| cell division protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|325928791|ref|ZP_08189960.1| 23S rRNA Um-2552 2'-O-methyltransferase family [Xanthomonas
perforans 91-118]
gi|81803099|sp|Q8PLQ8|RLME_XANAC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|123585340|sp|Q3BUR8|RLME_XANC5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|21107928|gb|AAM36598.1| cell division protein [Xanthomonas axonopodis pv. citri str. 306]
gi|78035750|emb|CAJ23441.1| cell division protein FtsJ [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|292599057|gb|EFF43197.1| cell division protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292604586|gb|EFF47960.1| cell division protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|325540872|gb|EGD12445.1| 23S rRNA Um-2552 2'-O-methyltransferase family [Xanthomonas
perforans 91-118]
Length = 210
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 86/207 (41%), Positives = 121/207 (58%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H DPYV++AQ EG R+R+AYKL ++ ++ ++L+ +VDLG++PG
Sbjct: 3 SRSKSSQRWLKEHFADPYVKKAQAEGMRSRAAYKLEELLQRDRLLKPGMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQ + G ++ RVVA+DILDM + GV+F DF + +G DLV
Sbjct: 63 WSQQVRKSMG---DSGRVVALDILDMPALAGVEFLHGDFREQAVLSQFEAMLGDVPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L GG FL+K FQG ++D + L++
Sbjct: 120 LSDMAPNKSGMDAVDQPRMMHLAELAMEFADTHLKPGGAFLIKLFQGVGSDDYIRELRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
++KV KP ASR S E++ L +G R
Sbjct: 180 YEKVTIRKPAASRKRSPEVYALGQGKR 206
>gi|260582443|ref|ZP_05850234.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae NT127]
gi|260094423|gb|EEW78320.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae NT127]
gi|301170080|emb|CBW29684.1| 23S rRNA methyltransferase [Haemophilus influenzae 10810]
Length = 209
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLARVGEDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFNVVKVRKPEASRGRSREVYIVATGYK 208
>gi|152995050|ref|YP_001339885.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinomonas sp. MWYL1]
gi|150835974|gb|ABR69950.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinomonas sp. MWYL1]
Length = 196
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 80/198 (40%), Positives = 126/198 (63%), Gaps = 4/198 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ H +DPYV+++Q +G+R+R++YKL++IN+K ++ + R+VDLG++PG WSQVAA++
Sbjct: 1 MKEHFDDPYVKKSQQDGYRSRASYKLIEINDKDKLFKPAMRVVDLGAAPGGWSQVAAKLV 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTI 148
G ++ +VA DIL+M P+ GV F + DF + + +E I + DLV+SDMA
Sbjct: 61 G---DHGTIVASDILEMAPLPGVSFVQGDFTEQEVYEAILAEIGDKKADLVISDMAPNMS 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+ D + M L E A A ++L GG+FLVK FQG + L ++ F V+ KP
Sbjct: 118 GNSSSDQPQAMYLVELALDMAAQVLRPGGNFLVKVFQGEGFEEYLKTMRAQFDSVVTRKP 177
Query: 209 VASRAESVEMFLLAKGFR 226
ASRA S E++LL + ++
Sbjct: 178 DASRARSREVYLLGRQYK 195
>gi|78485156|ref|YP_391081.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thiomicrospira crunogena
XCL-2]
gi|123555692|sp|Q31HG6|RLME_THICR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|78363442|gb|ABB41407.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Thiomicrospira crunogena
XCL-2]
Length = 206
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL H +D YV +A+ +GWR+R+ YKL +I+EK Q+ ++DLG++PG W
Sbjct: 3 RSKSSAGWLKEHFDDYYVNKAKQDGWRSRAIYKLQEIDEKDQLFSKGMTVIDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
SQ TG + RV A+DIL +EP GV F + DF + D ++ + A+ G DLV+
Sbjct: 63 SQWTTHQTG---DEGRVFALDILPVEPFAGVTFIQGDFQEDDVYQSLLDALDGREVDLVM 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G++ +D R M L E A ++L GD L+K FQG + +L L++ +
Sbjct: 120 SDMAPNMTGNKGVDIPRAMYLVELCVDLADQVLKPNGDLLMKVFQGEGYDQLLKSLREKY 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
QKV+ KP ASR S E++LLA+G +
Sbjct: 180 QKVLTRKPKASRPRSKEIYLLARGKK 205
>gi|319942668|ref|ZP_08016975.1| ribosomal RNA large subunit methyltransferase E [Sutterella
wadsworthensis 3_1_45B]
gi|319803751|gb|EFW00686.1| ribosomal RNA large subunit methyltransferase E [Sutterella
wadsworthensis 3_1_45B]
Length = 217
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
V + + S+R W+ RHINDP+V+R++ EG+RARS YKL++++EK +L+ +VDL
Sbjct: 1 MPVATKKLR-SNRAWIERHINDPFVKRSRAEGYRARSVYKLIELDEKEHLLKPGSTVVDL 59
Query: 75 GSSPGSWSQVAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
GS+PGSW+QV + R++A+DIL M+PI V F + DF + + + + + +
Sbjct: 60 GSAPGSWTQVVRERLAGPDGSVRGRIIAMDILPMDPIDDVYFLQGDFREQEVADKLAEIL 119
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G+ D+VLSDMA G D R++ L E A F LE L G F+ K FQG +
Sbjct: 120 NGDKVDVVLSDMAPNLSGIAAADAARSLLLNELALEFCLEHLAPNGVFVTKAFQGSGYSQ 179
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ LK+ F+KV KP ASR S E++L+++G +
Sbjct: 180 YVESLKRVFKKVAAKKPEASRDTSAEVYLVSRGLK 214
>gi|285017954|ref|YP_003375665.1| cell division protein ftsj (rrna (uridine) methyltransferase
activity ) [Xanthomonas albilineans GPE PC73]
gi|283473172|emb|CBA15678.1| probable cell division protein ftsj (rrna (uridine)
methyltransferase activity ) [Xanthomonas albilineans]
Length = 219
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 122/215 (56%), Gaps = 4/215 (1%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
L+ + + SS+ WL H DP+V++AQ EG R+R+AYKL ++ ++ ++L+ + +V
Sbjct: 4 LSVRPSMATRSKSSQRWLREHFADPFVKKAQAEGMRSRAAYKLEELLQRDRLLKPDMVVV 63
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQA 131
DLG++PG WSQ + G + RV+A+DIL+M P+ GV+F DF + +
Sbjct: 64 DLGAAPGGWSQQVRKSMG---DRGRVLALDILEMPPLAGVEFLHGDFREEAVLSQLEAML 120
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
DLVLSDMA G +D R M L E A FA L G FL+K FQG +D
Sbjct: 121 GETAVDLVLSDMAPNKSGMDAVDQPRMMHLAELAMAFADSHLKPNGVFLIKLFQGVGFDD 180
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ ++KV KP ASR S E++ L +G R
Sbjct: 181 YIRAMRRRYEKVTIRKPAASRKRSPEVYALGQGKR 215
>gi|254522154|ref|ZP_05134209.1| ribosomal RNA large subunit methyltransferase J [Stenotrophomonas
sp. SKA14]
gi|219719745|gb|EED38270.1| ribosomal RNA large subunit methyltransferase J [Stenotrophomonas
sp. SKA14]
Length = 210
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WL H +DP+V++AQ EG R+R+AYKL ++ E+ ++L+ + +VDLG++PG
Sbjct: 3 TRSKSSQRWLKEHFSDPFVKKAQAEGMRSRAAYKLEELLERDRLLKPHMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLV 139
WSQ R G + RV+A+DILDM P+ GV+F DF + DLV
Sbjct: 63 WSQQVRRQIG---DTGRVLALDILDMPPLAGVEFLHGDFREETVLSQFEAMLGDQPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L GG FL+K FQG +D + +++
Sbjct: 120 LSDMAPNKSGVGAVDQPRMMHLAELALDFADNHLKTGGAFLIKLFQGEGFDDYVREMRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
+ KV KP ASR S E++ L +G R
Sbjct: 180 YDKVSIRKPEASRKRSPEVYALGQGKR 206
>gi|254294177|ref|YP_003060200.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Hirschia baltica ATCC
49814]
gi|254042708|gb|ACT59503.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Hirschia baltica ATCC
49814]
Length = 251
Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats.
Identities = 92/203 (45%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SSR W+ R +NDPYV+RA GWRAR+AYKLL+++EK +L++ +R+VDLG +PGSW+QV
Sbjct: 49 SSRAWIERQLNDPYVRRAHEAGWRARAAYKLLELDEKFGLLKNTQRVVDLGCAPGSWTQV 108
Query: 85 AARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMA 144
+ G++ VV ID+L ++PI G + D D ++ + + G P LVLSDMA
Sbjct: 109 LMQKYGAHY----VVGIDLLPVDPIAGAHLIEGDVNDPEAMAEMMSVLQGKPTLVLSDMA 164
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
T GH++ DH+RT+ L E A FA++ L +GG+F K FQGG ++ L+ +F +V
Sbjct: 165 AATTGHKQTDHVRTVQLAEMAVQFAIDNLEVGGNFCTKVFQGGAQGELKALMDANFAEVK 224
Query: 205 HVKPVASRAESVEMFLLAKGFRK 227
+ KP +SRA S EMF +A GF++
Sbjct: 225 YWKPPSSRAGSPEMFAVALGFKQ 247
>gi|194365244|ref|YP_002027854.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Stenotrophomonas
maltophilia R551-3]
gi|226705317|sp|B4SRA0|RLME_STRM5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|194348048|gb|ACF51171.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Stenotrophomonas
maltophilia R551-3]
Length = 210
Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WL H +DP+V++AQ EG R+R+AYKL ++ E+ ++L+ + +VDLG++PG
Sbjct: 3 TRSKSSQRWLKEHFSDPFVKKAQAEGMRSRAAYKLEELLERDRLLKPHMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLV 139
WSQ R G + RV+A+DILDM P+ GV+F DF + DLV
Sbjct: 63 WSQQVRRQIG---DTGRVLALDILDMPPLAGVEFLHGDFREETVLSQFEAMLGDQPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L GG FL+K FQG +D + +++
Sbjct: 120 LSDMAPNKSGVGAVDQPRMMHLAELALDFADNHLKTGGAFLIKLFQGEGFDDYVRDMRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
+ KV KP ASR S E++ L +G R
Sbjct: 180 YDKVSIRKPEASRKRSPEVYALGQGKR 206
>gi|160872297|ref|ZP_02062429.1| ribosomal RNA large subunit methyltransferase J [Rickettsiella
grylli]
gi|159121096|gb|EDP46434.1| ribosomal RNA large subunit methyltransferase J [Rickettsiella
grylli]
Length = 209
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 88/204 (43%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 23 QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWS 82
+ SS+ WLN H DPYV+RA+ EG+R+RSAYKLL+I EK ++++ IVDLG++PG WS
Sbjct: 5 KSSSQRWLNEHFKDPYVKRAKKEGFRSRSAYKLLEIQEKTKLIKPGMVIVDLGAAPGGWS 64
Query: 83 QVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNPDLVLS 141
Q+A+R+ G+ +V A+DIL ME + V+F + DF + + + Q DLV+S
Sbjct: 65 QIASRLVGTT---GKVYALDILPMETLTPVEFLQGDFREESVIKQLLQRIQSKPIDLVIS 121
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
DMA G R +D R + L E A FA ++L G F+VK FQG L L+ F
Sbjct: 122 DMAPNFSGIRSVDQPRAIFLAELALDFAKKVLKPKGYFVVKAFQGKGFEAFLKELRSLFA 181
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
V KP ASR S E++L+A G+
Sbjct: 182 NVTIRKPSASRGRSTEVYLVAIGY 205
>gi|292493675|ref|YP_003529114.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosococcus halophilus
Nc4]
gi|291582270|gb|ADE16727.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosococcus halophilus
Nc4]
Length = 212
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+G S WL H DPYV +A+ +G+R+R+ +KL +I+ + ++L+ + +VDLG++PG
Sbjct: 3 KNKGHSARWLREHFRDPYVTKAKAQGYRSRAVFKLQEIDTRERLLRPSMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WSQ A G+ +V+A+DIL M P GV+F + DF + + ++ + G DLV
Sbjct: 63 WSQWAIEQVGA---QGQVIALDILPMVPPAGVQFIQGDFCEDNVLAELQNTLAGRVVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G +D R + L E A FA E L G FL+KTFQG + +++
Sbjct: 120 MSDMAPNMSGMAAVDQPRAIYLGELALAFAQEHLGPEGSFLLKTFQGEGFEALYEAIRQE 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F V KP ASR S E++++A+ R+
Sbjct: 180 FSGVRIKKPSASRGRSREVYIVARRPRR 207
>gi|255020638|ref|ZP_05292700.1| cell division protein FtsJ [Acidithiobacillus caldus ATCC 51756]
gi|254969874|gb|EET27374.1| cell division protein FtsJ [Acidithiobacillus caldus ATCC 51756]
Length = 207
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 85/205 (41%), Positives = 118/205 (57%), Gaps = 3/205 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL H DP+VQRA EG+R+R++YKLL+I EK +L+ +R++DLG++PG W
Sbjct: 3 RSKSSKQWLREHFQDPFVQRAAREGYRSRASYKLLEIQEKDGLLRRGQRVLDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
+QVAA I GS R+VA+D L M+P+ G + D D R A DL+LS
Sbjct: 63 TQVAAAIVGSE---GRIVAVDRLAMDPVPGALVIQGDIYDEAVIAQCRAAFPEGVDLILS 119
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
DMA G D R ++LCE A A E L GG L+K F G ++ L+ F+
Sbjct: 120 DMAPNLSGIASADQARAVALCELALDLAREWLVPGGKLLMKVFMGAGAQELRRELQGSFR 179
Query: 202 KVIHVKPVASRAESVEMFLLAKGFR 226
+++ KP ASRA S E + LA +R
Sbjct: 180 RIVVRKPEASRARSAEQYWLALDYR 204
>gi|325924512|ref|ZP_08186031.1| 23S rRNA Um-2552 2'-O-methyltransferase [Xanthomonas gardneri ATCC
19865]
gi|325545007|gb|EGD16342.1| 23S rRNA Um-2552 2'-O-methyltransferase [Xanthomonas gardneri ATCC
19865]
Length = 210
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 86/207 (41%), Positives = 121/207 (58%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H DPYV++AQ EG R+R+AYKL ++ ++ ++L+ N +VDLG++PG
Sbjct: 3 SRSKSSQRWLKEHFADPYVKKAQAEGMRSRAAYKLEELLQRDRLLKPNMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
W Q R G + RV+A+DIL+M P+ GV+F DF + +G DLV
Sbjct: 63 WCQQVRRSLG---DTGRVLALDILEMPPLAGVEFLHGDFREQAVLSEFEAMLGDVPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L GG FL+K FQG ++D + L++
Sbjct: 120 LSDMAPNKSGMDAVDQPRMMHLAELAMEFADTHLKTGGAFLIKLFQGVGSDDYIRELRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
++KV KP ASR S E++ L +G R
Sbjct: 180 YEKVTIRKPAASRKRSPEVYALGQGKR 206
>gi|190573711|ref|YP_001971556.1| putative cell division protein [Stenotrophomonas maltophilia K279a]
gi|226705318|sp|B2FKA1|RLME_STRMK RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|190011633|emb|CAQ45252.1| putative cell division protein [Stenotrophomonas maltophilia K279a]
Length = 210
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ SS+ WL H +DP+V++AQ EG R+R+AYKL ++ E+ ++L+ + +VDLG++PG
Sbjct: 3 TRSKSSQRWLKEHFSDPFVKKAQAEGMRSRAAYKLEELLERDRLLKPHMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLV 139
WSQ R G + RV+A+DILDM P+ GV+F DF + DLV
Sbjct: 63 WSQQVRRQIG---DTGRVLALDILDMPPLAGVEFLHGDFREEAVLSQFEAMLGDQPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L GG FL+K FQG +D + +++
Sbjct: 120 LSDMAPNKSGVGAVDQPRMMHLAELALDFADNHLKTGGAFLIKLFQGEGFDDYVRDMRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
+ KV KP ASR S E++ L +G R
Sbjct: 180 YDKVSIRKPEASRKRSPEVYALGQGKR 206
>gi|229844055|ref|ZP_04464196.1| 23S rRNA methyltransferase J [Haemophilus influenzae 6P18H1]
gi|229813049|gb|EEP48737.1| 23S rRNA methyltransferase J [Haemophilus influenzae 6P18H1]
Length = 209
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMSVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A DIL+M+PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLARVGEDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E++++A G++
Sbjct: 178 IRSLFNVVKVRKPEASRGRSREVYIVATGYK 208
>gi|319793960|ref|YP_004155600.1| ribosomal RNA methyltransferase rrmj/ftsj [Variovorax paradoxus
EPS]
gi|315596423|gb|ADU37489.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Variovorax paradoxus
EPS]
Length = 222
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 84/220 (38%), Positives = 122/220 (55%), Gaps = 9/220 (4%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
++ K K++ ++ WL+ HINDPYV+ A EG+RAR+AYKL +I+E +++ + +V
Sbjct: 1 MSTKAKSKKV---NKAWLHDHINDPYVKLATREGYRARAAYKLKEIDESLGLVKPGQLVV 57
Query: 73 DLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF 127
DLGS+PG+WSQ R N ++A+D+L MEPI GV F + DF +++ E
Sbjct: 58 DLGSTPGAWSQYLRRRMSPEGAAIGTLNGTIIALDMLAMEPIEGVTFIQGDFREVELLEQ 117
Query: 128 IRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
+ + G DLV+SDMA G D R L E A FA L G + K F G
Sbjct: 118 VLGVLAGRKADLVVSDMAPNISGIHSADGARIAHLIELAVDFAQHHLKPEGALVAKLFHG 177
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G ++ + L K F+ V KP ASR +S E FL+ G +
Sbjct: 178 GGYDESVKLFKASFRTVKPFKPKASRDKSAETFLVGMGLK 217
>gi|187477433|ref|YP_785457.1| ribosomal RNA large subunit methyltransferase j [Bordetella avium
197N]
gi|123513953|sp|Q2KVR5|RLME_BORA1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|115422019|emb|CAJ48541.1| ribosomal RNA large subunit methyltransferase j [Bordetella avium
197N]
Length = 219
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 125/208 (60%), Gaps = 3/208 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ S+DW+++HINDPYV+ AQ +G+RAR+A+KL++I E ++L+ +VDLGS+PGSW
Sbjct: 3 KKKFSKDWIHQHINDPYVKLAQQKGYRARAAFKLIEILEVEKLLKKGDVVVDLGSAPGSW 62
Query: 82 SQVAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDL 138
SQV + R++A+D+L MEPI GV+FF+ DF D + E R+ DL
Sbjct: 63 SQVVRERLAGPGGVVDGRIIALDLLPMEPIAGVEFFQGDFRDDEVLHELERRVGNHAVDL 122
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G D R +C+ A F+ L G +VK F G + I+ K+
Sbjct: 123 VISDMAPNLSGVGVADSARIQHVCDLALEFSCAHLKPNGVLIVKAFHGSGFSQIVQSFKQ 182
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F++V+ KP ASR +S E FL+A+ +
Sbjct: 183 RFKRVVERKPKASRDKSSETFLVARDLK 210
>gi|319776273|ref|YP_004138761.1| 23S rRNA methyltransferase [Haemophilus influenzae F3047]
gi|329123415|ref|ZP_08251979.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
aegyptius ATCC 11116]
gi|317450864|emb|CBY87088.1| 23S rRNA methyltransferase [Haemophilus influenzae F3047]
gi|327470997|gb|EGF16452.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
aegyptius ATCC 11116]
Length = 209
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G RV+A DIL+M PI+GV F + DF D + + +
Sbjct: 61 APGGWSQYVVSQIGGK---GRVIACDILEMAPIVGVDFLQGDFRDENVLNALLARVGEDK 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G +D R M L E A ++L G F+VK FQG ++ L
Sbjct: 118 VDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLRE 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F V KP ASR S E++++A G++
Sbjct: 178 TRSLFNVVKVRKPEASRGRSREVYIVATGYK 208
>gi|84624459|ref|YP_451831.1| cell division protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188575911|ref|YP_001912840.1| ribosomal RNA large subunit methyltransferase J [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|83305670|sp|Q5GYL7|RLME_XANOR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|123521583|sp|Q2P1M0|RLME_XANOM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705322|sp|B2SUB8|RLME_XANOP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|84368399|dbj|BAE69557.1| cell division protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188520363|gb|ACD58308.1| ribosomal RNA large subunit methyltransferase J [Xanthomonas oryzae
pv. oryzae PXO99A]
Length = 210
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H DPYV++A+ EG R+R+AYKL ++ ++ ++L+ +VDLG++PG
Sbjct: 3 SRSKSSQRWLKEHFADPYVKKARAEGMRSRAAYKLEELLQRDRLLKPGMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQ + G ++ RVVA+DILDM + GV+F DF + +G DLV
Sbjct: 63 WSQQVRKSMG---DSGRVVALDILDMPALAGVEFLHGDFREQAVLSQFEAMLGDVPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L GG FL+K FQG ++D + L++
Sbjct: 120 LSDMAPNKSGMDAVDQPRMMHLAELAMEFADAHLKPGGAFLIKLFQGVGSDDYIRELRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
++KV KP ASR S E++ L +G R
Sbjct: 180 YEKVTIRKPAASRKRSPEVYALGQGKR 206
>gi|296136184|ref|YP_003643426.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thiomonas intermedia
K12]
gi|295796306|gb|ADG31096.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Thiomonas intermedia
K12]
Length = 216
Score = 181 bits (458), Expect = 8e-44, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 120/213 (56%), Gaps = 2/213 (0%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + S+ WL H+NDPYV+ AQ EG+RAR+AYKL +I+E +L+ + +VDLGS
Sbjct: 1 MSSAKKNKFSKAWLQDHLNDPYVKMAQREGYRARAAYKLKEIDEAEGLLRPGQIVVDLGS 60
Query: 77 SPGSWSQVAA-RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN 135
+PGSWSQ A R+ A ++A+D+L MEP+ V+F DF + + + G
Sbjct: 61 TPGSWSQYARNRLMRGGAVQGTILALDLLPMEPVPDVRFLLGDFREEAVVNQLEALLEGR 120
Query: 136 P-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D+VLSDMA G D R L E A FA L G ++KTF G + I+
Sbjct: 121 KVDVVLSDMAPNLTGIPSADAARIEHLSELALDFAQRWLQPQGAMVIKTFHGSYYSQIVK 180
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K FQ+V VKP ASR +S E F+LA+ +K
Sbjct: 181 AFKLVFQQVKAVKPRASRDKSAETFILARTLKK 213
>gi|166712463|ref|ZP_02243670.1| cell division protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 210
Score = 181 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 120/207 (57%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H DPYV++A+ EG R+R+AYKL ++ ++ ++L+ +VDLG++PG
Sbjct: 3 SRSKSSQRWLKEHFADPYVKKARAEGMRSRAAYKLEELLQRDRLLKPGMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQ + G + RVVA+DILDM + GV+F DF + +G DLV
Sbjct: 63 WSQQVRKSMG---DRGRVVALDILDMPALAGVEFLHGDFREQAVLSQFEAMLGDVPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L GG FL+K FQG ++D + L++
Sbjct: 120 LSDMAPNKSGMDAVDQPRMMHLAELAMEFADAHLKPGGAFLIKLFQGVGSDDYIRELRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
++KV KP ASR S E++ L +G R
Sbjct: 180 YEKVTIRKPAASRKRSPEVYALGQGKR 206
>gi|58582573|ref|YP_201589.1| cell division protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58427167|gb|AAW76204.1| cell division protein [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 224
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H DPYV++A+ EG R+R+AYKL ++ ++ ++L+ +VDLG++PG
Sbjct: 17 SRSKSSQRWLKEHFADPYVKKARAEGMRSRAAYKLEELLQRDRLLKPGMVVVDLGAAPGG 76
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQ + G ++ RVVA+DILDM + GV+F DF + +G DLV
Sbjct: 77 WSQQVRKSMG---DSGRVVALDILDMPALAGVEFLHGDFREQAVLSQFEAMLGDVPVDLV 133
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L GG FL+K FQG ++D + L++
Sbjct: 134 LSDMAPNKSGMDAVDQPRMMHLAELAMEFADAHLKPGGAFLIKLFQGVGSDDYIRELRRR 193
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
++KV KP ASR S E++ L +G R
Sbjct: 194 YEKVTIRKPAASRKRSPEVYALGQGKR 220
>gi|325982670|ref|YP_004295072.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosomonas sp. AL212]
gi|325532189|gb|ADZ26910.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosomonas sp. AL212]
Length = 205
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 90/207 (43%), Positives = 128/207 (61%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ W+ H+ND +V++A+ EG+R+R+AYKLL+I EK QIL+ +VDLG++PGS
Sbjct: 2 KRAKTSKAWMKEHVNDFFVKQAKKEGYRSRAAYKLLEITEKDQILKPGLTVVDLGAAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLV 139
WSQVA+ G +V+A+DIL+M P+ GV+F + DF + + E + DLV
Sbjct: 62 WSQVASHKIGRG---GKVIAVDILEMAPLPGVEFIQGDFREEYAIVELKKHLGNDQLDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDM+ G D R+M L E A FALE LN GG+FLVK FQG + L ++
Sbjct: 119 ISDMSPNMSGIVISDQARSMYLAELALAFALEQLNYGGNFLVKVFQGRDFDQFLFDMRAG 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ VI KP ASR S E++LL G +
Sbjct: 179 FKNVIIRKPKASRDRSNELYLLGLGKK 205
>gi|148826009|ref|YP_001290762.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae PittEE]
gi|148716169|gb|ABQ98379.1| ribosomal RNA large subunit methyltransferase J [Haemophilus
influenzae PittEE]
Length = 239
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
++ SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG++PG
Sbjct: 34 KNVTASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGAAPG 93
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
WSQ G RV+A DIL+M+PI+GV F + DF D + + + +G D+
Sbjct: 94 GWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLERVGEAKVDV 150
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG ++ L ++
Sbjct: 151 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLREIRS 210
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 211 LFNVVKVRKPEASRGRSREVYIVATGYK 238
>gi|145636180|ref|ZP_01791850.1| cell division protein [Haemophilus influenzae PittHH]
gi|145270702|gb|EDK10635.1| cell division protein [Haemophilus influenzae PittHH]
Length = 239
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 72/208 (34%), Positives = 113/208 (54%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
++ SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG++PG
Sbjct: 34 KNVTASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGAAPG 93
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDL 138
WSQ G RV+A DIL+M+PI+GV F + DF D + + D+
Sbjct: 94 GWSQYVVSQIGGK---GRVIACDILEMDPIVGVDFLQGDFRDENVLNALLACVGEDKVDV 150
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L G F+VK FQG ++ L ++
Sbjct: 151 VMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLREIRS 210
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++++A G++
Sbjct: 211 LFNVVKVRKPEASRGRSREVYIVATGYK 238
>gi|325916042|ref|ZP_08178332.1| 23S rRNA Um-2552 2'-O-methyltransferase [Xanthomonas vesicatoria
ATCC 35937]
gi|325537718|gb|EGD09424.1| 23S rRNA Um-2552 2'-O-methyltransferase [Xanthomonas vesicatoria
ATCC 35937]
Length = 210
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H DPYV++AQ EG R+R+AYKL ++ ++ ++L+ +VDLG++PG
Sbjct: 3 SRSKSSQRWLKEHFADPYVKKAQAEGMRSRAAYKLEELLQRDRLLKPGMVVVDLGAAPGG 62
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLV 139
WSQ + G ++ RV+A+DILDM + GV F DF + +G DLV
Sbjct: 63 WSQQVRKSMG---DSGRVLALDILDMPALAGVDFLHGDFREQAVLSQFEAMLGDVPVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA L GG FL+K FQG ++D + L++
Sbjct: 120 LSDMAPNKSGMDAVDQPRMMHLAELAMEFADTHLKTGGAFLIKLFQGVGSDDYIRELRRR 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
+ KV KP ASR S E++ L +G R
Sbjct: 180 YDKVTIRKPAASRKRSPEVYALGQGKR 206
>gi|126642713|ref|YP_001085697.1| cell division protein [Acinetobacter baumannii ATCC 17978]
Length = 199
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 82/199 (41%), Positives = 126/199 (63%), Gaps = 4/199 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ H++DP+V++AQ EG+RAR+AYKLL+I EK+++++ +VDLG++PGSWSQ+A ++
Sbjct: 1 MREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVVDLGAAPGSWSQIAGKLV 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTI 148
GS V+A DIL M+ + V F + DF + +E + + G D+V+SDMA T
Sbjct: 61 GSK---GLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNILNGRQVDIVISDMAPNTS 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+R +D R + LCE A FA ++L G F+VK FQG ++ + F + KP
Sbjct: 118 GNRAVDQPRQIYLCELALDFAQKVLGPNGQFVVKVFQGAGFDEFRKQVVDSFDVLKTAKP 177
Query: 209 VASRAESVEMFLLAKGFRK 227
ASRA S E+FL+ +G +K
Sbjct: 178 AASRARSKEVFLVGQGRKK 196
>gi|121605506|ref|YP_982835.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Polaromonas
naphthalenivorans CJ2]
gi|143460978|sp|A1VQI6|RLME_POLNA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120594475|gb|ABM37914.1| 23S rRNA Um-2552 2'-O-methyltransferase [Polaromonas
naphthalenivorans CJ2]
Length = 245
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 10/216 (4%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ ++ WL+ HINDPYV++A+ EG+RAR+A+KL +++E +++ +VDLGS+PG+
Sbjct: 25 KGKKVNKAWLHDHINDPYVKQARKEGYRARAAFKLKEMDETLGLIKPGDCVVDLGSTPGA 84
Query: 81 WSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-----Q 130
WSQ R N R++ +D+L MEPI GV F + DF + + + +
Sbjct: 85 WSQYVRRKLSPTGAAVGALNGRIIGLDLLPMEPIEGVVFIQGDFREPEVLAKLEQALSTE 144
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
DLV+SDMA G D R L E A FA + G +VK F G +
Sbjct: 145 KGPVKVDLVISDMAPNLSGIESADAARIAHLVELAVEFAQTRMKPDGALVVKLFHGSGYD 204
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
D++ L + F+ V +KP ASR S E FL+ +G +
Sbjct: 205 DLVKLFQASFKVVKRMKPKASRPNSSETFLVGRGLK 240
>gi|146329213|ref|YP_001210115.1| 23S rRNA methyltransferase [Dichelobacter nodosus VCS1703A]
gi|158513305|sp|A5EXB6|RLME_DICNV RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|146232683|gb|ABQ13661.1| 23S rRNA methyltransferase [Dichelobacter nodosus VCS1703A]
Length = 210
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 118/206 (57%), Gaps = 5/206 (2%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL H +D +V +A+ EG+R+R+ YKL +I EK +I++ N +V+LG++PG W
Sbjct: 3 RSKSSGRWLKEHHSDVFVLKAREEGFRSRAVYKLKEIQEKDRIIRPNMTVVELGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--GGNPDLV 139
SQ A G R++A+DIL M+ + V F + DF + + I G DLV
Sbjct: 63 SQYVA---GILNGRGRMIALDILPMDALPDVHFIQGDFREETVLNALYDIIGEGNYVDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA T G + +D R+M L E A FA E L GGDFL K F G + + LK
Sbjct: 120 ISDMAPNTSGIKSVDQARSMHLVELAADFAQERLVAGGDFLCKVFHGAGFDALFQHLKTQ 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F V+ KP ASRA S E +LLA+GF
Sbjct: 180 FSTVLTRKPQASRARSQETYLLARGF 205
>gi|87119799|ref|ZP_01075696.1| cell division protein FtsJ [Marinomonas sp. MED121]
gi|86165275|gb|EAQ66543.1| cell division protein FtsJ [Marinomonas sp. MED121]
Length = 196
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/198 (42%), Positives = 131/198 (66%), Gaps = 4/198 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ H +D YV+R+Q +G+R+R++YKL++IN+K ++L+S ++VDLG++PG WSQ+A R+
Sbjct: 1 MKEHFDDVYVKRSQQDGYRSRASYKLIEINDKDKLLKSGMKVVDLGAAPGGWSQIAGRLI 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTI 148
G RVVA DIL+M P+ GV F + DF + D ++ I +AIG DLV+SDMA
Sbjct: 61 GDK---GRVVASDILEMAPLPGVTFVQGDFTEDDVYQEILKAIGDEHADLVISDMAPNMS 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+ +D ++M L E A A ++L GG+FLVK FQG ++ L ++ F V+ KP
Sbjct: 118 GNSAVDQPQSMYLVELALDMASQVLRPGGNFLVKVFQGEGFDEYLKTMRGMFTSVVTRKP 177
Query: 209 VASRAESVEMFLLAKGFR 226
+SRA S E++LL + F+
Sbjct: 178 ESSRARSREVYLLGRQFK 195
>gi|114321125|ref|YP_742808.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Alkalilimnicola
ehrlichii MLHE-1]
gi|122311297|sp|Q0A769|RLME_ALHEH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114227519|gb|ABI57318.1| 23S rRNA Um-2552 2'-O-methyltransferase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 209
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 91/198 (45%), Positives = 124/198 (62%), Gaps = 4/198 (2%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
WL+ H +D +VQ+AQ G+R+R+A+KLL+I EK ++++ +VDLG++PG W QVAA +
Sbjct: 13 WLDEHHSDHWVQQAQKAGYRSRAAFKLLEIQEKDRLIRPGMTVVDLGAAPGGWCQVAAEL 72
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPT 147
G + V A+DIL ME + GV + DF + + + QA+ G P DLVLSDMA
Sbjct: 73 VG---DRGAVFALDILPMEALPGVHVIQGDFTEEAPLQALLQALEGRPVDLVLSDMAPNL 129
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G R +D R M L E A FA ++L GGDFL K F G +D L++ F KVI K
Sbjct: 130 SGVRVVDQPRAMYLAELALDFAGQVLQPGGDFLTKVFHGEGLDDYRRDLQRQFSKVITRK 189
Query: 208 PVASRAESVEMFLLAKGF 225
P ASRA S E +LLA+GF
Sbjct: 190 PRASRARSRESYLLARGF 207
>gi|163857845|ref|YP_001632143.1| ribosomal RNA large subunit methyltransferase j [Bordetella petrii
DSM 12804]
gi|226703282|sp|A9HYV0|RLME_BORPD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|163261573|emb|CAP43875.1| ribosomal RNA large subunit methyltransferase j [Bordetella petrii]
Length = 211
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ S+DW+++HINDPYV+ AQ +G+RAR+A+KL++I + ++++ +VDLGS+PGSW
Sbjct: 3 KKKFSKDWIHQHINDPYVKMAQQKGYRARAAFKLIEILDTEKLMRRGDIVVDLGSAPGSW 62
Query: 82 SQVAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
SQVA + R++A+D+L MEP+ GV+F + DF D + +++ +GG P L
Sbjct: 63 SQVARERLAGPGGVVDGRIIALDLLPMEPVAGVEFIQGDFRDEAVLQQLQEMVGGQPVSL 122
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G D R +CE A FA L G +VK F G + I+ K+
Sbjct: 123 VISDMAPNLSGVGVADSARIQHVCELALDFACNHLKPDGALIVKAFHGSGFSQIVQSFKQ 182
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F++V+ KP ASR +S E FL+A+ +
Sbjct: 183 RFKRVVERKPKASRDKSSETFLVARDLK 210
>gi|195569596|ref|XP_002102795.1| GD19317 [Drosophila simulans]
gi|194198722|gb|EDX12298.1| GD19317 [Drosophila simulans]
Length = 250
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 8/226 (3%)
Query: 9 SRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS 67
+ Q+ +N + SS++WL R + DPYV++A++ +R RSA+KLL+I++K+ ILQ
Sbjct: 20 GGKYAKQQPRNLKGRSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEIDDKYGILQP 79
Query: 68 NRRIVDLGSSPGSWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKFD--FL 120
+++ G++PGSW+QVA T +N R V +ID+L + G F
Sbjct: 80 GDTVLECGAAPGSWTQVAVERTNANGKQERAPQGAVFSIDLLHFHAVPGATIFGGMDFTT 139
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
L + VLSDMA G R +D +LC FAL M +
Sbjct: 140 SLAQKRLREALQHRKVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSAPQAHLV 199
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
VK + G + + + ++KV VKP ASR +S E FL+A+ F+
Sbjct: 200 VKVWDNGDVPKLERDMLRFYEKVKRVKPRASRGDSAEHFLVARNFK 245
>gi|161830541|ref|YP_001597195.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
RSA 331]
gi|189040687|sp|A9N8M5|RLME_COXBR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|161762408|gb|ABX78050.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
RSA 331]
Length = 212
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 81/205 (39%), Positives = 127/205 (61%), Gaps = 8/205 (3%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
S+ WL H DPYV+RA+ EG+ +R+AYKLL+I++K+++ + + ++DLG++PG WSQVA
Sbjct: 4 SKRWLEEHAKDPYVKRAKKEGYPSRAAYKLLEIHQKYKLFKPSMNVIDLGAAPGGWSQVA 63
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-----IRQAIGGNPDLVL 140
+ G V+AID+L M+ +L V F + DF + + + ++ + G DLV+
Sbjct: 64 KDLVGPK---GVVIAIDLLPMQSMLDVIFIQGDFNEPEIFNQLEAIVAKKTLTGQVDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G + +D R++ L E A A ++L GG FLVK FQG + L L+ +F
Sbjct: 121 SDMAPNISGIKNVDQSRSLHLVELAWDCAQKLLARGGTFLVKVFQGPGVDRFLINLRPYF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+V +KP ASR+ S E+++LA F
Sbjct: 181 NQVKFLKPSASRSRSSEIYILAGEF 205
>gi|21356387|ref|NP_650835.1| CG11447 [Drosophila melanogaster]
gi|9910869|sp|Q9VDT6|RRMJ1_DROME RecName: Full=Putative ribosomal RNA methyltransferase CG11447;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|7300552|gb|AAF55704.1| CG11447 [Drosophila melanogaster]
gi|17945992|gb|AAL49040.1| RE49934p [Drosophila melanogaster]
gi|220957638|gb|ACL91362.1| CG11447-PA [synthetic construct]
gi|220960190|gb|ACL92631.1| CG11447-PA [synthetic construct]
Length = 250
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 8/226 (3%)
Query: 9 SRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS 67
+ Q+ +N + SS++WL R + DPYV++A++ +R RSA+KLL+I++K+ IL+
Sbjct: 20 GGKYAKQQPRNLKGRSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEIDDKYGILRP 79
Query: 68 NRRIVDLGSSPGSWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKFD--FL 120
+++ G++PGSW+QVA T +N R V +ID+L + G F
Sbjct: 80 GDTVLECGAAPGSWTQVAVERTNANGKQERAPQGAVFSIDLLHFHAVPGATIFGGMDFTS 139
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
L + VLSDMA G R +D +LC FAL M +
Sbjct: 140 SLAQKRLREALQDRKVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSAPQAHLV 199
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
VK + G + + + ++KV VKP ASR +S E FL+A+ F+
Sbjct: 200 VKVWDNGDVPKLERDMLRFYEKVKRVKPRASRGDSAEHFLVARNFK 245
>gi|29654650|ref|NP_820342.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii RSA 493]
gi|154707305|ref|YP_001424788.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii Dugway
5J108-111]
gi|212212272|ref|YP_002303208.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii
CbuG_Q212]
gi|81628790|sp|Q83BY4|RLME_COXBU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040686|sp|A9KGE6|RLME_COXBN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703292|sp|B6IZD5|RLME_COXB2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|29541918|gb|AAO90856.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii RSA 493]
gi|154356591|gb|ABS78053.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii Dugway
5J108-111]
gi|212010682|gb|ACJ18063.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii
CbuG_Q212]
Length = 212
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 81/205 (39%), Positives = 127/205 (61%), Gaps = 8/205 (3%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
S+ WL H DPYV+RA+ EG+ +R+AYKLL+I++K+++ + + ++DLG++PG WSQVA
Sbjct: 4 SKRWLEEHEKDPYVKRAKKEGYPSRAAYKLLEIHQKYKLFKPSMNVIDLGAAPGGWSQVA 63
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-----IRQAIGGNPDLVL 140
+ G V+AID+L M+ +L V F + DF + + + ++ + G DLV+
Sbjct: 64 KDLVGPK---GVVIAIDLLPMQSMLDVIFIQGDFNEPEIFNQLEAIVAKKTLTGQVDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G + +D R++ L E A A ++L GG FLVK FQG + L L+ +F
Sbjct: 121 SDMAPNISGIKNVDQSRSLHLVELAWDCAQKLLARGGTFLVKVFQGPGVDRFLINLRPYF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+V +KP ASR+ S E+++LA F
Sbjct: 181 NQVKFLKPSASRSRSSEIYILAGEF 205
>gi|195353572|ref|XP_002043278.1| GM26867 [Drosophila sechellia]
gi|194127392|gb|EDW49435.1| GM26867 [Drosophila sechellia]
Length = 250
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS++WL R + DPYV++A++ +R RSA+KLL+I++K+ ILQ +++ G++PG
Sbjct: 32 KGRSKSSQEWLTRQLTDPYVEKARMMNYRCRSAFKLLEIDDKYGILQPGDTVLECGAAPG 91
Query: 80 SWSQVAARITGSNANNTR-----VVAIDILDMEPILGVK-FFKFDFLDLDSWEFIRQA-I 132
SW+QVA T +N R V +ID+L + G F DF + + +R+A
Sbjct: 92 SWTQVAVERTNANGKQERAPQGAVFSIDLLHFHAVPGATIFGGMDFTTSLAQKRLREAVQ 151
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
+ VLSDMA G R +D +LC FAL M +VK + G +
Sbjct: 152 HRKVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSAPQAHLVVKVWDNGDVPKL 211
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ + ++KV VKP ASR +S E FL+A+ F+
Sbjct: 212 ERDMLRFYEKVKRVKPRASRGDSAEHFLVARNFK 245
>gi|153209329|ref|ZP_01947348.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
'MSU Goat Q177']
gi|165924044|ref|ZP_02219876.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
RSA 334]
gi|212218759|ref|YP_002305546.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii
CbuK_Q154]
gi|226703291|sp|B6J802|RLME_COXB1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|120575400|gb|EAX32024.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
'MSU Goat Q177']
gi|165916503|gb|EDR35107.1| ribosomal RNA large subunit methyltransferase J [Coxiella burnetii
RSA 334]
gi|212013021|gb|ACJ20401.1| 23S rRNA Um2552 2'-O-methyltransferase [Coxiella burnetii
CbuK_Q154]
Length = 212
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 80/205 (39%), Positives = 127/205 (61%), Gaps = 8/205 (3%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
S+ WL H DPYV+RA+ EG+ +R+AYKLL+I++K+++ + + ++DLG++PG WSQVA
Sbjct: 4 SKRWLEEHEKDPYVKRAKKEGYPSRAAYKLLEIHQKYKLFKPSMNVIDLGAAPGGWSQVA 63
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-----IRQAIGGNPDLVL 140
+ G V+AID+L ++ +L V F + DF + + + ++ + G DLV+
Sbjct: 64 KDLVGPK---GVVIAIDLLPIQSMLDVIFIQGDFNEPEIFNQLEAIVAKKTLTGQVDLVI 120
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G + +D R++ L E A A ++L GG FLVK FQG + L L+ +F
Sbjct: 121 SDMAPNISGIKNVDQSRSLHLVELAWDCAQKLLARGGTFLVKVFQGPGVDRFLINLRPYF 180
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+V +KP ASR+ S E+++LA F
Sbjct: 181 NQVKFLKPSASRSRSSEIYILAGEF 205
>gi|319786408|ref|YP_004145883.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudoxanthomonas
suwonensis 11-1]
gi|317464920|gb|ADV26652.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudoxanthomonas
suwonensis 11-1]
Length = 227
Score = 178 bits (450), Expect = 7e-43, Method: Composition-based stats.
Identities = 83/198 (41%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
WL H +DPYV++AQ EG R+R+AYKL ++ E+ ++L+ +VDLG++PG WSQ +
Sbjct: 28 WLREHFSDPYVKKAQAEGLRSRAAYKLEELLERDRLLKPGMAVVDLGAAPGGWSQYVRQA 87
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPT 147
G ++ RV+A+DIL+M P+ GV+F DF + D + + G P DLVLSDMA
Sbjct: 88 LG---DSGRVIALDILEMPPLAGVEFLHGDFREDDVLSQLESLLDGQPVDLVLSDMAPNM 144
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G +D R M L E A FA L GG FL+K FQG ++ + L++ ++KV K
Sbjct: 145 SGVDAVDQPRAMYLAELAMEFADNHLRPGGAFLIKLFQGVGFDEYVRQLRRRYEKVAIRK 204
Query: 208 PVASRAESVEMFLLAKGF 225
P ASR S E++ L +G
Sbjct: 205 PAASRKRSPEVYALGQGK 222
>gi|237841293|ref|XP_002369944.1| ribosomal RNA large subunit methyltransferase J, putative
[Toxoplasma gondii ME49]
gi|211967608|gb|EEB02804.1| ribosomal RNA large subunit methyltransferase J, putative
[Toxoplasma gondii ME49]
Length = 342
Score = 178 bits (450), Expect = 7e-43, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 2 VKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
+ G +++N++ +S +W+ R I D YV RAQ R+R+A+KL Q+++
Sbjct: 96 SRTGGGRRAYSGEPRIRNKNSSHTS-EWIKRQITDRYVLRAQERNLRSRAAFKLEQLDDD 154
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLD 121
+ N+ +VDLG+ PG WSQVA + RV+A+D + M+P+ F +
Sbjct: 155 FLFFRKNQVVVDLGAYPGGWSQVALDRIRAGGGEGRVIAVDPVAMDPLPHHTFIQGSVGQ 214
Query: 122 LDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
+ + + D+VLSDMA IG ++ DHL LC A+ ++L +GG F+
Sbjct: 215 AGTLQALLEELGESKADVVLSDMAPACIGVKQDDHLNCAELCLFASDLMEQVLKLGGTFV 274
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
K F G TN+ L+ F+KV KP A R ES EM+ + + F
Sbjct: 275 TKMFMGSETNNFKVYLRTRFKKVSSAKPRACRQESREMYFVCQHF 319
>gi|221504430|gb|EEE30103.1| ribosomal RNA large subunit methyltransferase J, putative
[Toxoplasma gondii VEG]
Length = 342
Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 2 VKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
+ G +++N++ +S +W+ R I D YV RAQ R+R+A+KL Q+++
Sbjct: 96 SRTGGGRRAYSGEPRIRNKNSSHTS-EWIKRQITDRYVLRAQERNLRSRAAFKLEQLDDD 154
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLD 121
+ N+ +VDLG+ PG WSQVA + RV+A+D + M+P+ F +
Sbjct: 155 FLFFRKNQVVVDLGAYPGGWSQVALDRIRAGGGEGRVIAVDPVAMDPLPHHTFIQGSVGQ 214
Query: 122 LDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
+ + + D+VLSDMA IG ++ DHL LC A+ ++L +GG F+
Sbjct: 215 AGTLQALLEELGESKADVVLSDMAPACIGVKQDDHLNCAELCLFASDLMEQVLKLGGTFV 274
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
K F G TN+ L+ F+KV KP A R ES EM+ + + F
Sbjct: 275 TKMFMGSETNNFKVYLRTRFKKVSSAKPRACRQESREMYFVCQHF 319
>gi|195498039|ref|XP_002096355.1| GE25629 [Drosophila yakuba]
gi|194182456|gb|EDW96067.1| GE25629 [Drosophila yakuba]
Length = 250
Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 74/226 (32%), Positives = 116/226 (51%), Gaps = 8/226 (3%)
Query: 9 SRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS 67
+ Q+ +N + SS++WL R + DPYV++A++ +R RSA+KLL+I++K++IL+
Sbjct: 20 GGKYAKQQPRNLKGRSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEIDDKYEILRP 79
Query: 68 NRRIVDLGSSPGSWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKFD--FL 120
++D G++PGSW+QVA T +N R V +ID+L + G F
Sbjct: 80 GGTVLDCGAAPGSWTQVAVERTNANGKQKRASQGAVFSIDLLHFHAVPGATIFGGMDFTT 139
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
L + VLSDMA G R +D +LC FAL M +
Sbjct: 140 SLAQKRLNEALQHRKVNCVLSDMAPNATGVRMLDQESITNLCYEVVRFALAMSAPQAHLV 199
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
VK + G + + + ++KV VKP ASR +S E FL+A+ F+
Sbjct: 200 VKVWDNGDVPKLERDMLRFYEKVKRVKPRASRGDSAEHFLVARNFK 245
>gi|195157182|ref|XP_002019475.1| GL12202 [Drosophila persimilis]
gi|194116066|gb|EDW38109.1| GL12202 [Drosophila persimilis]
Length = 249
Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 72/214 (33%), Positives = 114/214 (53%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS++WL R + DPYV++A++ +R RSA+KLL+I++K++IL+ ++D G++PG
Sbjct: 31 KGKSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEIDDKYKILKPGDAVLDCGAAPG 90
Query: 80 SWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKFD--FLDLDSWEFIRQAI 132
SW+QVA T ++ R V +ID+L + G + L
Sbjct: 91 SWTQVAVERTNAHGKIERAPVGAVFSIDLLHFHAVPGATIYGGMDFTTPLSQQRLREALA 150
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G + VLSDMA G R +D +LC FAL M + +VK + G +
Sbjct: 151 GRQVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSAPQANLVVKVWDNGDVPKL 210
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K ++KV VKP ASR +S E FL+A+G++
Sbjct: 211 ERNMLKFYEKVKRVKPRASRGDSAEHFLVARGYK 244
>gi|221480608|gb|EEE19062.1| ribosomal RNA large subunit methyltransferase J, putative
[Toxoplasma gondii GT1]
Length = 342
Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 2/225 (0%)
Query: 2 VKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
+ G +++N++ +S +W+ R I D YV RAQ R+R+A+KL Q+++
Sbjct: 96 SRTGGGRRAYSGEPRIRNKNSSHTS-EWIKRQITDRYVLRAQERNLRSRAAFKLEQLDDD 154
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLD 121
+ N+ +VDLG+ PG WSQVA + RV+A+D + M+P+ F +
Sbjct: 155 FLFFRKNQVVVDLGAYPGGWSQVALDRIRAGGGEGRVIAVDPVAMDPLPHHTFIQGSVGQ 214
Query: 122 LDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
+ + + D+VLSDMA IG ++ DHL LC A+ ++L +GG F+
Sbjct: 215 AGTLQALLEELGESKADVVLSDMAPSCIGVKQDDHLNCAELCLFASDLMEQVLKLGGTFV 274
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
K F G TN+ L+ F+KV KP A R ES EM+ + + F
Sbjct: 275 TKMFMGSETNNFKVYLRTRFKKVSSAKPRACRQESREMYFVCQHF 319
>gi|92115197|ref|YP_575125.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Chromohalobacter
salexigens DSM 3043]
gi|122419130|sp|Q1QSY2|RLME_CHRSD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91798287|gb|ABE60426.1| 23S rRNA Um-2552 2'-O-methyltransferase [Chromohalobacter
salexigens DSM 3043]
Length = 210
Score = 178 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 85/198 (42%), Positives = 122/198 (61%), Gaps = 4/198 (2%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
WL H +D YVQR+ +G+R+R++YKLL+++ K +L+ ++DLG++PG WSQ+AA
Sbjct: 14 WLKEHFDDRYVQRSWQDGYRSRASYKLLELDAKDALLKPGMTVIDLGAAPGGWSQIAADK 73
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPT 147
G V+A DIL+M+ + GV F + DF +++ E I A+ G DLV+SDMA
Sbjct: 74 VGDKGC---VIASDILEMDALAGVTFVQGDFTEMEVLEQILVALEGRRVDLVMSDMAPNM 130
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G ID + M L E A A + L+ GG FL K FQG + L L+ F+KV+ K
Sbjct: 131 SGMAAIDQPQAMYLVELALDLARQTLSPGGRFLAKVFQGEGFDAYLKELRGSFRKVVTRK 190
Query: 208 PVASRAESVEMFLLAKGF 225
P ASRA S E++LLA+GF
Sbjct: 191 PEASRARSREVYLLAEGF 208
>gi|195482827|ref|XP_002086815.1| GE11211 [Drosophila yakuba]
gi|194186605|gb|EDX00217.1| GE11211 [Drosophila yakuba]
Length = 250
Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats.
Identities = 74/226 (32%), Positives = 116/226 (51%), Gaps = 8/226 (3%)
Query: 9 SRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS 67
+ Q+ +N + SS++WL R + DPYV++A++ +R RSA+KLL+I++K++IL+
Sbjct: 20 GGKYAKQQPRNLKGRSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEIDDKYEILRP 79
Query: 68 NRRIVDLGSSPGSWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKFD--FL 120
++D G++PGSW+QVA T +N R V +ID+L + G F
Sbjct: 80 GGTVLDCGAAPGSWTQVAVERTNANGKQKRASQGAVFSIDLLHFHAVPGATIFGGMDFTT 139
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
L + VLSDMA G R +D +LC FAL M +
Sbjct: 140 SLAQKRLNEALQHRKVNCVLSDMAPNATGVRMLDQESITNLCYEVVRFALAMSAPQAHLV 199
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
VK + G + + + ++KV VKP ASR +S E FL+A+ F+
Sbjct: 200 VKVWDNGDVPKLERDMLRFYEKVKRVKPRASRGDSAEHFLVARNFK 245
>gi|76808881|ref|YP_333018.1| ribosomal RNA large subunit methyltransferase j [Burkholderia
pseudomallei 1710b]
gi|121599034|ref|YP_992622.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei SAVP1]
gi|217423678|ref|ZP_03455179.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 576]
gi|238563619|ref|ZP_00438573.2| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei GB8 horse 4]
gi|242315402|ref|ZP_04814418.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 1106b]
gi|251767842|ref|ZP_02268580.2| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei PRL-20]
gi|254199450|ref|ZP_04905816.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei FMH]
gi|76578334|gb|ABA47809.1| ribosomal RNA large subunit methyltransferase j [Burkholderia
pseudomallei 1710b]
gi|121227844|gb|ABM50362.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei SAVP1]
gi|147749046|gb|EDK56120.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei FMH]
gi|217393536|gb|EEC33557.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 576]
gi|238520335|gb|EEP83796.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei GB8 horse 4]
gi|242138641|gb|EES25043.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 1106b]
gi|243061551|gb|EES43737.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei PRL-20]
Length = 252
Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 2 VKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K S S R + ++ S WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+
Sbjct: 17 AKSAASRSNRQQSLHRMAKNRFNQS--WLHDHINDPYVKMAQREGYRARAAYKLKEIDEQ 74
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARI---------TGSNANNTRVVAIDILDMEPILGV 112
++++ + IVDLG++PGSWSQ A + ++A+D+L MEP+ V
Sbjct: 75 DKLIRPGQVIVDLGAAPGSWSQYARNKLAQGKRRDAVREGGIDGTIIALDMLPMEPVADV 134
Query: 113 KFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
F + DF + + + + G DLV+SDMA G D R +C+ A FA
Sbjct: 135 HFIQGDFREESVLHQLEEVLAGRAVDLVISDMAPNLSGVAVADAARIEHVCDLALEFAQN 194
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L G LVK F G + I+ K F+ V KP ASR +S E F+L + ++
Sbjct: 195 HLKPDGALLVKCFHGSGYSQIVEKFKHQFKTVAPRKPKASRDKSSETFILGRHLKQ 250
>gi|302779940|ref|XP_002971745.1| hypothetical protein SELMODRAFT_95614 [Selaginella moellendorffii]
gi|300160877|gb|EFJ27494.1| hypothetical protein SELMODRAFT_95614 [Selaginella moellendorffii]
Length = 297
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 75/210 (35%), Positives = 108/210 (51%), Gaps = 12/210 (5%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KLLQI+E+ ILQ +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRKAKEEGWRARSAFKLLQIDEEFGILQGVKRVVDLCAAPGSWSQ 57
Query: 84 VAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
V +R + + +VAID+ M PI GV + D + E + Q G
Sbjct: 58 VLSRQLYVPSKSDKQDDRPLIVAIDLQPMAPIDGVVQIQGDITSARTAELVIQHFHGCQA 117
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLV+ D A G +D L AA +L G F+ K F+G + + L
Sbjct: 118 DLVVCDGAPDVTGLHDMDEFVQAQLILAALTIVTHVLRPGAKFVAKVFRGKDISLLYAQL 177
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F V KP +SR S+E F++ + ++
Sbjct: 178 KMFFTTVTCTKPKSSRNSSIEAFVVCEDYQ 207
>gi|300123620|emb|CBK24892.2| Ribosomal RNA methyltransferase [Blastocystis hominis]
Length = 259
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 72/229 (31%), Positives = 118/229 (51%), Gaps = 7/229 (3%)
Query: 3 KPPGSSSRRGLTQKVKN-----RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
K + + + +K + SS WL+R + DPY A+ EG+R+R+ YKL +
Sbjct: 31 KAARNGENKYSARNIKKDYLRQKGKSHSSTIWLDRQLRDPYTIMAKEEGYRSRAVYKLKE 90
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I+E+ + + +VD+G++PG WSQ A G ++ V +ID+LD+EPI GV F
Sbjct: 91 IDERFHVFREGNIVVDVGAAPGGWSQYAVERVGITIPHS-VFSIDLLDIEPITGVHFLCG 149
Query: 118 DFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF+ + + I D+V+SD+A G IDH + + +CE+ FA +
Sbjct: 150 DFMSESARCKLEDYIDNRRVDVVISDIAPNFSGDHSIDHEKQIDMCESVIEFAKRVAKKD 209
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++K QG + ++ FQ V +KP ASR +S E++ + K F
Sbjct: 210 CSVVLKVLQGEEFPSFMKSVRSQFQSVNLIKPKASRKKSTEIYCVLKHF 258
>gi|301631567|ref|XP_002944869.1| PREDICTED: putative ribosomal RNA methyltransferase 2-like [Xenopus
(Silurana) tropicalis]
Length = 246
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 83/215 (38%), Positives = 121/215 (56%), Gaps = 7/215 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+S + + WL R + DPYV+ AQ +R RSA+KLL+I+ KH ILQ ++D G++PG
Sbjct: 29 KSRTAAEQRWLARQMKDPYVREAQTHNYRCRSAFKLLEIDNKHHILQPGHHVIDCGAAPG 88
Query: 80 SWSQVAARITGSNANN-----TRVVAIDILDMEPILGVKFF-KFDFLDLDSWEFIRQ-AI 132
+WSQVA S + VV +D+L++ P+ G F D D D+ + I
Sbjct: 89 AWSQVAVEKVNSLGRDSAASAGFVVGVDLLNIAPLDGAVFLSNSDITDFDTQKKIISVLP 148
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G D++LSDMA G R +DH R +++C + + +L GG FL K + G N +
Sbjct: 149 SGKADVILSDMAPNATGIRDLDHQRLVNMCLSLLELSERVLLSGGTFLCKVWDGSEINLV 208
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L++ FQ V VKP ASR ES E++LLAK R+
Sbjct: 209 RDRLRQRFQDVRTVKPKASRMESAEVYLLAKLHRQ 243
>gi|33596681|ref|NP_884324.1| ribosomal RNA large subunit methyltransferase j [Bordetella
parapertussis 12822]
gi|33600444|ref|NP_888004.1| ribosomal RNA large subunit methyltransferase j [Bordetella
bronchiseptica RB50]
gi|81427145|sp|Q7W8R6|RLME_BORPA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|81431686|sp|Q7WMD3|RLME_BORBR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|33568043|emb|CAE31956.1| ribosomal RNA large subunit methyltransferase j [Bordetella
bronchiseptica RB50]
gi|33573382|emb|CAE37366.1| ribosomal RNA large subunit methyltransferase j [Bordetella
parapertussis]
Length = 210
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 127/208 (61%), Gaps = 3/208 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
S+DW+++HINDPYV+ AQ +G+RAR+A+KLL+I + ++++ +VDLGS+PGSW
Sbjct: 3 KNKFSKDWIHQHINDPYVKLAQQKGYRARAAFKLLEILDAEKLMRRGDIVVDLGSAPGSW 62
Query: 82 SQVAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
SQVA A + R++A+D+L MEP+ GV+F + DF + E + + + G P DL
Sbjct: 63 SQVARERLAGPGGAVDGRIIALDLLPMEPVAGVEFIQGDFREEAVLEQLARMVEGQPVDL 122
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G D R +CE A FA L G +VK F G + I+ K+
Sbjct: 123 VISDMAPNLSGVGVADSARIQHVCELALEFACAHLKPNGALIVKAFHGSGFSQIVQSYKQ 182
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F++V+ KP ASR +S E FL+A+ +
Sbjct: 183 RFKRVVERKPKASRDKSSETFLVARDLK 210
>gi|237811778|ref|YP_002896229.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei MSHR346]
gi|237504609|gb|ACQ96927.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei MSHR346]
Length = 252
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 84/236 (35%), Positives = 123/236 (52%), Gaps = 12/236 (5%)
Query: 2 VKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
K S S R + ++ S WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+
Sbjct: 17 AKSAASRSNRQQSLHRMAKNRFNQS--WLHDHINDPYVKMAQREGYRARAAYKLKEIDEQ 74
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARI---------TGSNANNTRVVAIDILDMEPILGV 112
++++ + IVDLG++PGSWSQ A + ++A+D+L MEP+ V
Sbjct: 75 DKLIRPGQVIVDLGAAPGSWSQYARNKLAQGKRRDAVREGGIDGTIIALDMLPMEPVADV 134
Query: 113 KFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
F + DF + + + + G DLV+SDMA G D R +C+ A FA
Sbjct: 135 HFIQGDFREESVLHQLEEVLAGRAVDLVISDMAPNLSGVAVADAARIEHVCDLALEFAQN 194
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L G LVK F G + I+ K F+ V KP ASR +S E F+L + ++
Sbjct: 195 HLKPDGALLVKCFHGSGYSQIVEKFKHQFKTVAPRKPKASRDKSSETFILGRHLKQ 250
>gi|194899901|ref|XP_001979496.1| GG23538 [Drosophila erecta]
gi|190651199|gb|EDV48454.1| GG23538 [Drosophila erecta]
Length = 250
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 74/226 (32%), Positives = 115/226 (50%), Gaps = 8/226 (3%)
Query: 9 SRRGLTQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS 67
+ Q+ +N + SS++WL R + DPYV++A++ +R RSA+KLL+I++K+ IL+
Sbjct: 20 GGKYAKQQPRNLKGRSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEIDDKYGILRP 79
Query: 68 NRRIVDLGSSPGSWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKFD--FL 120
++D G++PGSW+QVA T +N R V +ID+L + G F
Sbjct: 80 GGTVLDCGAAPGSWTQVAVERTNANGKQERAAQGAVFSIDLLHFHAVPGATIFGGMDFTT 139
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
L + VLSDMA G R +D +LC FAL M +
Sbjct: 140 SLAQMRLKEALQDRKVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSAPQAHLV 199
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
VK + G + + + ++KV +KP ASR +S E FLLA+ F+
Sbjct: 200 VKVWDNGDVPKLERDMLRFYEKVKRIKPRASRGDSAEHFLLARNFK 245
>gi|33592218|ref|NP_879862.1| ribosomal RNA large subunit methyltransferase j [Bordetella
pertussis Tohama I]
gi|81578758|sp|Q7VZ56|RLME_BORPE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|33571863|emb|CAE41377.1| ribosomal RNA large subunit methyltransferase j [Bordetella
pertussis Tohama I]
gi|332381635|gb|AEE66482.1| ribosomal RNA large subunit methyltransferase j [Bordetella
pertussis CS]
Length = 210
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 127/208 (61%), Gaps = 3/208 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
S+DW+++HINDPYV+ AQ +G+RAR+A+KLL+I + ++++ +VDLGS+PGSW
Sbjct: 3 KNKFSKDWIHQHINDPYVKLAQQKGYRARAAFKLLEILDAEKLMRRGDVVVDLGSAPGSW 62
Query: 82 SQVAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
SQVA + R++A+D+L MEP+ GV+F + DF + + E + + + G P DL
Sbjct: 63 SQVARERLAGPGGVVDGRIIALDLLPMEPVAGVEFIQGDFREEEVLEQLARMVDGQPVDL 122
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G D R +CE A FA L G +VK F G + I+ K+
Sbjct: 123 VISDMAPNLSGVGVADSARIQHVCELALEFACAHLKPNGALIVKAFHGSGFSQIVQSYKQ 182
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F++V+ KP ASR +S E FL+A+ +
Sbjct: 183 RFKRVVERKPKASRDKSSETFLVARDLK 210
>gi|313201615|ref|YP_004040273.1| ribosomal RNA methyltransferase rrmj/ftsj [Methylovorus sp. MP688]
gi|312440931|gb|ADQ85037.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methylovorus sp. MP688]
Length = 197
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 118/198 (59%), Gaps = 4/198 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ H+ND +V+RAQ +G+RAR+AYKL++I++K Q+++ IVDLG++PGSWSQVA +
Sbjct: 1 MQEHVNDEFVKRAQRDGYRARAAYKLMEIDDKDQLIKPGMTIVDLGATPGSWSQVAVQRL 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
R++A+D+L+M I GV F + DF + + + DLV++DMA
Sbjct: 61 K---GQGRIIALDLLEMAAIPGVDFIQGDFREDAVLLQLEEKLNNRPIDLVIADMAPNIS 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G +D L E A F+L+ L GG+FLVK F G ++I+ ++ F KV+ KP
Sbjct: 118 GISSVDQANAAYLTELALEFSLKWLKPGGNFLVKVFIGSGFDEIMKTMRLGFDKVVTRKP 177
Query: 209 VASRAESVEMFLLAKGFR 226
ASR S E++LL +
Sbjct: 178 KASRDRSSEVYLLGLKRK 195
>gi|293606999|ref|ZP_06689343.1| ribosomal RNA large subunit methyltransferase J [Achromobacter
piechaudii ATCC 43553]
gi|292814596|gb|EFF73733.1| ribosomal RNA large subunit methyltransferase J [Achromobacter
piechaudii ATCC 43553]
Length = 210
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 126/208 (60%), Gaps = 3/208 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
S+DW+++HINDPYV+ AQ +G+RAR+A+KL++I + ++++ ++DLGS+PGSW
Sbjct: 3 KNKFSKDWIHQHINDPYVKLAQQKGYRARAAFKLIEILDTEKLMRRGDLVIDLGSAPGSW 62
Query: 82 SQVAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDL 138
SQVA + R++A+D+L MEP+ GV+F + DF D D + + +G DL
Sbjct: 63 SQVARERLAGPGGVVDGRIIALDLLPMEPVAGVEFIQGDFRDDDVLKQLEDMVGSRAVDL 122
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G D R +CE A F+ L G +VK F G + I+ K+
Sbjct: 123 VISDMAPNLSGVGSADSARIQHVCELAMEFSRAHLKPNGALIVKAFHGSGFSQIVQTFKQ 182
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
HF++V+ KP ASR +S E FL+A+ +
Sbjct: 183 HFKRVVERKPKASRDKSSETFLVARDLK 210
>gi|224809482|ref|NP_001007385.2| FtsJ homolog 1 [Danio rerio]
Length = 323
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 8/204 (3%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ EGWRARSA+KLLQ++E+ ++ + R VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDIYYRLAKEEGWRARSAFKLLQLDEEFKLFKGVSRAVDLCAAPGSWSQV 58
Query: 85 AARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
+R + ++VA+D+ M P+ GV + D + + E I + G DLV+
Sbjct: 59 LSRKLRGKDKSEEVKIVAVDLQAMAPLPGVTQIQGDITKISTAEEIIRHFEGESADLVVC 118
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA +L GG+F+ K F+G + LK F
Sbjct: 119 DGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGNFVAKIFRGKDVTLLYSQLKIFFS 178
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F++ + +
Sbjct: 179 FVTCAKPPSSRNSSIEAFVVCQNY 202
>gi|157423575|gb|AAI53565.1| FtsJ homolog 1 (E. coli) [Danio rerio]
Length = 323
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 8/204 (3%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ EGWRARSA+KLLQ++E+ ++ + R VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDIYYRLAKEEGWRARSAFKLLQLDEEFKLFKGVSRAVDLCAAPGSWSQV 58
Query: 85 AARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
+R + ++VA+D+ M P+ GV + D + + E I + G DLV+
Sbjct: 59 LSRKLRGKDKSEEVKIVAVDLQAMAPLPGVTQIQGDITKISTAEEIIRHFEGESADLVVC 118
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA +L GG+F+ K F+G + LK F
Sbjct: 119 DGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGNFVAKIFRGKDVTLLYSQLKIFFS 178
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F++ + +
Sbjct: 179 FVTCAKPPSSRNSSIEAFVVCQNY 202
>gi|311108149|ref|YP_003981002.1| methyltransferase [Achromobacter xylosoxidans A8]
gi|310762838|gb|ADP18287.1| FtsJ-like methyltransferase family protein [Achromobacter
xylosoxidans A8]
Length = 210
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 125/208 (60%), Gaps = 3/208 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
S+DW+++HINDPYV+ AQ +G+RAR+A+KL++I + ++++ +VDLGS+PGSW
Sbjct: 3 KNKFSKDWIHQHINDPYVKLAQQKGYRARAAFKLIEILDTEKLMRRGDLVVDLGSAPGSW 62
Query: 82 SQVAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDL 138
SQVA + R++A+D+L MEP+ GV+F + DF D + + + +G DL
Sbjct: 63 SQVARERLAGPGGVVDGRIIALDLLPMEPVAGVEFIQGDFRDDEVLKQLEDMVGSRAVDL 122
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G D R +CE A F+ L G +VK F G + I+ K+
Sbjct: 123 VISDMAPNLSGVGIADSARIQHVCELAMEFSCAHLKPNGVLIVKAFHGSGFSQIVESFKQ 182
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F++V+ KP ASR +S E FL+A+ +
Sbjct: 183 RFKRVVERKPKASRDKSSETFLVARDLK 210
>gi|194741340|ref|XP_001953147.1| GF17621 [Drosophila ananassae]
gi|190626206|gb|EDV41730.1| GF17621 [Drosophila ananassae]
Length = 254
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 73/214 (34%), Positives = 119/214 (55%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS++WL R + DPYV++A++ +R RSA+KLL++++K+ IL+ ++D G++PG
Sbjct: 32 KGRSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEMDDKYGILRPGDTVLDCGAAPG 91
Query: 80 SWSQVAARITGSNANNTR-----VVAIDILDMEPILGVK-FFKFDFLDLDSWEFIRQAIG 133
SW+QVA T +N R V +ID+L + G F DF + + +R+++
Sbjct: 92 SWTQVAVERTNANGKQERAPQGAVFSIDLLHFHAVPGATIFGGMDFTSTLAQKRLRESLN 151
Query: 134 GNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G + VLSDMA G R +D +LC FA+ M +VK + G +
Sbjct: 152 GRQVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFAIAMSAPQAHLVVKVWDNGDVPKL 211
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ + ++KV VKP ASR +S E FL+A+ F+
Sbjct: 212 ESNMLRFYEKVKRVKPRASRGDSAEHFLVARSFK 245
>gi|198454814|ref|XP_001359736.2| GA11008 [Drosophila pseudoobscura pseudoobscura]
gi|198132965|gb|EAL28888.2| GA11008 [Drosophila pseudoobscura pseudoobscura]
Length = 249
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 72/214 (33%), Positives = 115/214 (53%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS++WL R + DPYV++A++ +R RSA+KLL+I++K++IL++ ++D G++PG
Sbjct: 31 KGKSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEIDDKYKILKTGDAVLDCGAAPG 90
Query: 80 SWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKFD--FLDLDSWEFIRQAI 132
SW+QVA T ++ R V +ID+L + G + L
Sbjct: 91 SWTQVAVERTNAHGKMERAPVGAVFSIDLLHFHAVPGATIYGGMDFTTPLSQQRLREALA 150
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G + VLSDMA G R +D +LC FAL M + +VK + G +
Sbjct: 151 GRQVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSAPQANLVVKVWDNGDVPKL 210
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K ++KV VKP ASR +S E FL+A+G++
Sbjct: 211 ERNMLKFYEKVKRVKPRASRGDSAEHFLVARGYK 244
>gi|158298233|ref|XP_318425.4| AGAP003974-PA [Anopheles gambiae str. PEST]
gi|157014425|gb|EAA13594.4| AGAP003974-PA [Anopheles gambiae str. PEST]
Length = 304
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 7/203 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y + A+ EGWRARSA+KL+ I+E QI R VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIYYRLAKEEGWRARSAFKLIHIDEVFQIFDGVTRAVDLCAAPGSWSQVLSKRLY 64
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DLVLSDM 143
+ + +++A+D+ M P+ G+ + D L + E I + G LV+ D
Sbjct: 65 ESRDPAERDEVKIIAVDLQTMGPLPGIIQLQGDITKLSTAEAIIEHFGDQQKAQLVICDG 124
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
A G ID L AA +L GG F+ K F+G T+ + L+ F++V
Sbjct: 125 APDVTGLHDIDEYIQSQLLLAALNITTHVLTPGGTFVAKIFRGKDTSLLYSQLRIFFERV 184
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + +R
Sbjct: 185 TIAKPPSSRNSSIEAFVVCQDYR 207
>gi|68472105|ref|XP_719848.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|68472340|ref|XP_719731.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|46441562|gb|EAL00858.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|46441688|gb|EAL00983.1| potential tRNA anticodon loop methyltransferase [Candida albicans
SC5314]
gi|238881121|gb|EEQ44759.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Candida albicans WO-1]
Length = 293
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 4/197 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y +RA+ EGWRARSA+KLLQ+NE+ + + R+VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDLYYRRAKEEGWRARSAFKLLQLNEEFNLFKDITRVVDLCAAPGSWSQVLSQKLG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ + +VA+D+ M PI GV + D + + IR GG P D V SD A G
Sbjct: 65 PD---STIVAVDLQPMTPIDGVTTIQADITHPKTLQRIRDCFGGEPADFVCSDGAPDVTG 121
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L +A +L GG F+ K F+G + + L F KVI KP
Sbjct: 122 LHDLDEYIQSQLILSALQLTTCLLKPGGSFVAKIFRGRDIDLLYSQLSYLFDKVICAKPR 181
Query: 210 ASRAESVEMFLLAKGFR 226
+SR S+E F++ G++
Sbjct: 182 SSRGTSLEAFIVCLGYK 198
>gi|126334424|ref|XP_001379067.1| PREDICTED: similar to cell division protein FtsJ [Monodelphis
domestica]
Length = 301
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 80/215 (37%), Positives = 124/215 (57%), Gaps = 7/215 (3%)
Query: 18 KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSS 77
++R + WL RH+ DP+V+ A++E +R RSA+KLL+INEKHQI R++D G++
Sbjct: 78 RHRGKTATEHLWLTRHLKDPFVKAAKVENYRCRSAFKLLEINEKHQIFHPGLRVLDCGAA 137
Query: 78 PGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQA 131
PG+WSQVA + N++ V+ +D+L + P+ G F D D +++ I++
Sbjct: 138 PGAWSQVAVQKVNAAGTDPNSSVGFVLGVDLLHIFPLEGAIFLCPADVTDSRTFDKIQEQ 197
Query: 132 IGGNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
+ G V+ SDMA G R++DH +S+C + F +L GG FL K + G +
Sbjct: 198 LPGQKADVILSDMAPNATGIRELDHQNLISMCLSLLNFTSSILLPGGTFLCKFWDGSQRH 257
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ L+K FQ V +KP ASR ES E + LAK +
Sbjct: 258 LLQNRLEKEFQNVRTIKPKASRKESSETYFLAKSY 292
>gi|260793442|ref|XP_002591721.1| hypothetical protein BRAFLDRAFT_80816 [Branchiostoma floridae]
gi|229276930|gb|EEN47732.1| hypothetical protein BRAFLDRAFT_80816 [Branchiostoma floridae]
Length = 303
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y ++A+ EGWRARSA+KL+QI+E+ +L +++VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDIYYRKAKEEGWRARSAFKLMQIDEEFNVLSGVQKVVDLCAAPGSWSQV 58
Query: 85 AARIT----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
++ +++ ++VA+D+ M PI GV + D + + + I G DLV
Sbjct: 59 LSKRLRGEGKQKSDDVKIVAVDLQAMAPIPGVIQIQGDITKVSTAQEIIGHFSGEQADLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+ D A G ID L AA +L GG F+ K F+G + LK
Sbjct: 119 VCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKKGGGFVAKIFRGKDITLLYSQLKIF 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F V KP +SR S+E F++ +G+
Sbjct: 179 FPDVTVAKPRSSRNSSIESFVVCRGY 204
>gi|317405975|gb|EFV86253.1| ribosomal RNA large subunit methyltransferase J [Achromobacter
xylosoxidans C54]
Length = 210
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 127/208 (61%), Gaps = 3/208 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
S+DW+++HINDPYV+ AQ +G+RAR+A+KL++I + ++L+ +VDLGS+PGSW
Sbjct: 3 KNKFSKDWIHQHINDPYVKMAQQKGYRARAAFKLIEILDTEKLLRRGDLVVDLGSAPGSW 62
Query: 82 SQVAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDL 138
SQVA + R++A+D+L MEP+ GV+F + DF + D + + +G DL
Sbjct: 63 SQVARERLAGPGGVVDGRIIALDMLPMEPVAGVEFIQGDFREDDILKQLEDMVGSRAVDL 122
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G D R +CE A F+L L G +VK F G + I+ K+
Sbjct: 123 VISDMAPNLSGVGIADAARIQHVCELAMEFSLAHLKPNGALIVKAFHGTGFSQIVESYKQ 182
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
HF++V+ KP ASR +S E FL+A+ +
Sbjct: 183 HFKRVVERKPKASRDKSSETFLVARDLK 210
>gi|55250314|gb|AAH85449.1| FtsJ homolog 1 (E. coli) [Danio rerio]
gi|182890610|gb|AAI64849.1| Ftsj1 protein [Danio rerio]
Length = 323
Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 8/204 (3%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ EGWRARSA+KLLQ++E+ ++ + R VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDIYYRLAKEEGWRARSAFKLLQLDEEFKLFRGVSRAVDLCAAPGSWSQV 58
Query: 85 AARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
+R + ++VA+D+ M P+ GV + D + + E I + G DLV+
Sbjct: 59 LSRKLRGKDKSEEVKIVAVDLQAMAPLPGVTQIQGDITKISTAEEIIRHFEGESADLVVC 118
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA +L GG+F+ K F+G + LK F
Sbjct: 119 DGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGNFVAKIFRGKDVTLLYSQLKIFFS 178
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F++ + +
Sbjct: 179 FVTCAKPPSSRNSSIEAFVVCQNY 202
>gi|303256870|ref|ZP_07342884.1| ribosomal RNA large subunit methyltransferase J [Burkholderiales
bacterium 1_1_47]
gi|330998881|ref|ZP_08322608.1| ribosomal RNA large subunit methyltransferase J [Parasutterella
excrementihominis YIT 11859]
gi|302860361|gb|EFL83438.1| ribosomal RNA large subunit methyltransferase J [Burkholderiales
bacterium 1_1_47]
gi|329576095|gb|EGG57614.1| ribosomal RNA large subunit methyltransferase J [Parasutterella
excrementihominis YIT 11859]
Length = 214
Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 122/209 (58%), Gaps = 3/209 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S+ W+ RH+ DP+V+++ EG+RARS YKL++I++K +I++ +VDLG++PGS
Sbjct: 6 KKLRSNPAWIKRHLTDPFVKKSVQEGYRARSVYKLMEIDDKDKIIKPGMSVVDLGAAPGS 65
Query: 81 WSQVAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-D 137
W+Q+ + +V+A+DIL MEPI GV F + DF + + + + + G D
Sbjct: 66 WTQIVKERLTDKDGKIDGKVIAMDILPMEPIEGVHFLQGDFREQEVADKLTDLLEGEKVD 125
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
+VLSDMA G D R + L E A FA E L G F+ K FQG + + K
Sbjct: 126 VVLSDMAPNLSGVAAADAARCLLLNELALDFAKENLKKNGSFVCKVFQGSGYSQYVEACK 185
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F+KV KP ASR+ S E++++A+ +
Sbjct: 186 KTFRKVSVRKPEASRSSSAEVYIVARDLK 214
>gi|241953819|ref|XP_002419631.1| 2'-O-ribose tRNA anticodon loop methyltransferase, putative; tRNA
(uridine-2'-O-)-methyltransferase, putative [Candida
dubliniensis CD36]
gi|223642971|emb|CAX43227.1| 2'-O-ribose tRNA anticodon loop methyltransferase, putative
[Candida dubliniensis CD36]
Length = 293
Score = 176 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 75/197 (38%), Positives = 108/197 (54%), Gaps = 4/197 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
N+ D Y +RA+ EGWRARSA+KLLQ+NE+ + + R+VDL ++PGSWSQV ++ G
Sbjct: 5 NKDKRDLYYRRAKEEGWRARSAFKLLQLNEEFDLFEGITRVVDLCAAPGSWSQVLSQKLG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
N + +VA+D+ M PI GV + D + + IR GG P D V SD A G
Sbjct: 65 PN---STIVAVDLQPMTPIDGVTTIQADITHPKTLQRIRDCFGGEPADFVCSDGAPDVTG 121
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L +A +L GG F+ K F+G + + L F KVI KP
Sbjct: 122 LHDLDEYIQSQLILSALQLTTCLLKPGGSFVAKIFRGRDIDLLYSQLSYLFDKVICAKPR 181
Query: 210 ASRAESVEMFLLAKGFR 226
+SR S+E F++ G++
Sbjct: 182 SSRGTSLEAFIVCLGYK 198
>gi|195054507|ref|XP_001994166.1| GH16178 [Drosophila grimshawi]
gi|193896036|gb|EDV94902.1| GH16178 [Drosophila grimshawi]
Length = 249
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 74/214 (34%), Positives = 113/214 (52%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS+DWL R + DPYV++A++ +R RSA+KLL++++K++IL+ ++D G++PG
Sbjct: 34 KGRSKSSQDWLTRQLADPYVEKARMLNYRCRSAFKLLEMDDKYKILKPGDLVLDCGAAPG 93
Query: 80 SWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKFD--FLDLDSWEFIRQAI 132
SW+QVA T +N R V +ID+L + G F L
Sbjct: 94 SWTQVAVERTNANGKIERAPRGAVYSIDLLHFHAVPGATIFGGMDFTAPLAQQRLRESLA 153
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
+ VLSDMA G R +D +LC FAL M + +VK + G +
Sbjct: 154 DRKVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSAPHANLVVKIWDNGDVPKL 213
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++KV VKP ASR +S E FLLA+GF+
Sbjct: 214 ERDILSYYEKVKRVKPRASRGDSAEHFLLARGFK 247
>gi|90409010|ref|ZP_01217140.1| hypothetical protein PCNPT3_10771 [Psychromonas sp. CNPT3]
gi|90309895|gb|EAS38050.1| hypothetical protein PCNPT3_10771 [Psychromonas sp. CNPT3]
Length = 222
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 114/200 (57%), Gaps = 4/200 (2%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
W+ H+ND YV+ A G R+R+ +KL +IN+K ++++S +VDLG++PGSWSQ
Sbjct: 25 RWMQEHVNDFYVKEANRLGLRSRAVFKLDEINKKDKLIRSGMTVVDLGAAPGSWSQWCVD 84
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYP 146
GS +V+A DIL M+ I GV F + DF D +++ D+VLSDM+
Sbjct: 85 TVGS---RGKVIACDILAMDSIAGVDFLQGDFRDEAVLHALLKRIGPHKLDVVLSDMSPN 141
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G+ +D ++M L E A ++L G F+VK F G + + +KK F V
Sbjct: 142 MSGNAAMDQPKSMYLVELALEMCSDVLKKDGSFIVKVFMGADFDTFMKEVKKRFNVVKTR 201
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SRA S E++L+A GF+
Sbjct: 202 KPDSSRARSREVYLVATGFK 221
>gi|50424141|ref|XP_460657.1| DEHA2F06842p [Debaryomyces hansenii CBS767]
gi|49656326|emb|CAG88989.1| DEHA2F06842p [Debaryomyces hansenii]
Length = 301
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 112/206 (54%), Gaps = 8/206 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y +RA+ EGWRARSA+KLLQ+NE+ Q+ + +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDLYYRRAKEEGWRARSAFKLLQLNEQFQLFKGVKRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT--RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
V +R N ++V++D+ M PI GV + D + + I + GG P D V
Sbjct: 58 VLSRELFENQKQADAKIVSVDLQPMTPIEGVTTLQADITHPKTLQKILEIFGGEPADFVC 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G +D L +A +L GG F+ K F+G + + L F
Sbjct: 118 SDGAPDVTGLHDLDEYIQAQLILSALQLTTCILKPGGAFVAKIFRGRDIDLLYSQLSYLF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
++VI KP +SR S+E F++ G++
Sbjct: 178 ERVICAKPRSSRGTSLEAFIVCLGYK 203
>gi|300795838|ref|NP_001178187.1| putative ribosomal RNA methyltransferase 2 [Bos taurus]
gi|297490658|ref|XP_002698278.1| PREDICTED: FtsJ homolog 2-like [Bos taurus]
gi|296473105|gb|DAA15220.1| FtsJ homolog 2-like [Bos taurus]
Length = 244
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 125/214 (58%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+S G+ WL RH+ DP+V+ A++E +R RSA+KLL++NE+HQIL+ R++D G++PG
Sbjct: 25 KSRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEMNERHQILRPGLRVLDCGAAPG 84
Query: 80 SWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQAIG 133
+WSQVA + +A V+ +D+L + P+ G F D D ++ I++ +
Sbjct: 85 AWSQVAVQRVNAAGTDPSAPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTFRKIQELLP 144
Query: 134 GNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G V+ SDMA G R +DH R +SLC + ++L+ G FL KT+ G + +
Sbjct: 145 GGRADVILSDMAPNATGIRSLDHDRLISLCLSLLDMVPDVLHPRGTFLCKTWAGSQSQRL 204
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + FQ VKP ASR ES E++LLA +R
Sbjct: 205 QKRLTQEFQNTRTVKPEASRKESSEVYLLATQYR 238
>gi|255732766|ref|XP_002551306.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Candida tropicalis
MYA-3404]
gi|240131047|gb|EER30608.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Candida tropicalis
MYA-3404]
Length = 293
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 4/197 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
N+ D Y +RA+ EGWRARSA+KLLQ+NE+ + + R+VDL ++PGSWSQV ++ G
Sbjct: 5 NKDKRDLYYRRAKEEGWRARSAFKLLQLNEEFNLFEDLTRVVDLCAAPGSWSQVLSQKLG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
N + +VA+D+ M PI GV + D + + I GG P D V SD A G
Sbjct: 65 PN---STIVAVDLQPMTPIDGVTTIQADITHPRTLQRILDCFGGEPADFVCSDGAPDVTG 121
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L +A +L GG F+ K F+G + + L F KVI KP
Sbjct: 122 LHDLDEYIQAQLVLSALQLTTCLLKPGGKFVAKIFRGRDIDLLYSQLSYLFDKVICAKPR 181
Query: 210 ASRAESVEMFLLAKGFR 226
+SR S+E F++ G++
Sbjct: 182 SSRGTSLEAFIVCLGYK 198
>gi|260944280|ref|XP_002616438.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238850087|gb|EEQ39551.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 301
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 106/198 (53%), Gaps = 3/198 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y +RA+ EGWRARSA+KLLQINE+ I RR+VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDLYYRRAKEEGWRARSAFKLLQINEQFNIFDGVRRVVDLCAAPGSWSQVLSRELN 64
Query: 91 SNA--NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPT 147
N ++VA+D+ M PI GV + D + + I GG P D V SD A
Sbjct: 65 KNGDKKEAKIVAVDLQPMAPIDGVTCIQADITHPKTLQKILDLFGGEPADFVCSDGAPDV 124
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G +D L +A +L GG F+ K F+G + + L F++VI K
Sbjct: 125 TGLHDLDEYIQAQLILSALQLTTCILKPGGTFVAKIFRGRDIDLLYSQLGYLFERVICAK 184
Query: 208 PVASRAESVEMFLLAKGF 225
P +SR S+E F++ G+
Sbjct: 185 PRSSRGTSLEAFIVCLGY 202
>gi|291232361|ref|XP_002736125.1| PREDICTED: AGAP004177-PA-like [Saccoglossus kowalevskii]
Length = 239
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 1/207 (0%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS++WL+R +NDPYV+RAQ+ +RARSA+KL++I++K+ IL+ ++D G++PG
Sbjct: 29 KGRSKSSQEWLSRQLNDPYVKRAQMGNYRARSAFKLIEIDDKYAILRPGSVVIDCGAAPG 88
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLV 139
+W+QV + + V + DF + + I + + N V
Sbjct: 89 AWTQVTVERINAEGKGQVISVDLKYFQPINGAVIIDQSDFTLESTQKLIFEQMQKNQADV 148
Query: 140 -LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
+SDMA G +DH M LC+AA FA ++L G FL K ++GG + L K
Sbjct: 149 IISDMAPNASGMHAMDHENIMVLCQAAFGFAKQVLRNNGIFLCKLWEGGQSGKFKKDLAK 208
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGF 225
F+ V VKP +SR +S EMF LA+GF
Sbjct: 209 TFKTVKIVKPDSSRKDSAEMFFLARGF 235
>gi|237748683|ref|ZP_04579163.1| ribosomal RNA large subunit methyltransferase J [Oxalobacter
formigenes OXCC13]
gi|229380045|gb|EEO30136.1| ribosomal RNA large subunit methyltransferase J [Oxalobacter
formigenes OXCC13]
Length = 215
Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats.
Identities = 89/210 (42%), Positives = 120/210 (57%), Gaps = 4/210 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S ++ W+ H++DP+V+ AQ EG+RAR+AYKL++I+E +++ + IVDLGS+PGS
Sbjct: 2 SKNKFNKSWMKNHLDDPFVKMAQKEGYRARAAYKLIEIDEDAHLIKPGQVIVDLGSTPGS 61
Query: 81 WSQVAARITGSNAN---NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
WSQ R GS+ N V+ +D+L MEPI GV FF+ DF + + + + G
Sbjct: 62 WSQYVVRKLGSSGANQLNGTVIGLDLLPMEPIEGVHFFQGDFREESVLQELENLLQGRKA 121
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLVLSDMA G D R L E A FA L G LVK F G + NDIL
Sbjct: 122 DLVLSDMAPNLSGIASADAARVEYLMELALDFAQAHLKPSGALLVKCFNGSSYNDILKNF 181
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V KP ASR S E+FLL + R
Sbjct: 182 RETFVTVTPKKPKASRDYSSEIFLLGRQLR 211
>gi|319778416|ref|YP_004129329.1| Cell division protein FtsJ [Taylorella equigenitalis MCE9]
gi|317108440|gb|ADU91186.1| Cell division protein FtsJ [Taylorella equigenitalis MCE9]
Length = 210
Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats.
Identities = 81/207 (39%), Positives = 123/207 (59%), Gaps = 2/207 (0%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
S++W+++HINDPYV+ AQ +G+RAR+A+KL++I + +++ IVDLGSSPGSW
Sbjct: 3 KNKFSKNWIHQHINDPYVKLAQQKGYRARAAFKLIEILDAEKLMHRGDIIVDLGSSPGSW 62
Query: 82 SQVAARI-TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLV 139
SQVA + + R++A+D+L ME I GV+F + DF D + + + + DLV
Sbjct: 63 SQVARERLLKNGVIDGRIIALDLLPMEHIEGVEFIQGDFRDETILKALEEKVGFQQVDLV 122
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G D R + E A FA L G +VK F G + ++ L KK+
Sbjct: 123 ISDMAPNLSGISSADSARIQHVVELAVEFATNHLKPQGALIVKAFHGSGFSQLIELFKKN 182
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F +V+ +KP ASR +S E F++ K +
Sbjct: 183 FVRVVEIKPKASRDKSSETFIVGKKLK 209
>gi|195112102|ref|XP_002000615.1| GI22429 [Drosophila mojavensis]
gi|193917209|gb|EDW16076.1| GI22429 [Drosophila mojavensis]
Length = 254
Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS+DWL R + DPYV++A++ +R RSA+KLL++++K++IL+ ++D G++PG
Sbjct: 34 KGKSKSSQDWLTRQLADPYVEKARMLNFRCRSAFKLLEMDDKYKILKPGDVVLDCGAAPG 93
Query: 80 SWSQVAARITGSNANNTR-----VVAIDILDMEPILGVK-FFKFDFLDLDSWEFIRQAIG 133
SW+QVAA T +N R V +ID+L + G F DF + + +R+++
Sbjct: 94 SWTQVAAERTNANGKTERMPRGAVYSIDLLHFHAVPGATIFGGMDFTSPLAQQRLRESLA 153
Query: 134 GN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G + VLSDMA G R +D +LC FAL M + +VK + G +
Sbjct: 154 GRSVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSAPQANLVVKIWDNGDVPKL 213
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++KV VKP ASR +S E FLLA+GF+
Sbjct: 214 ERDILCYYEKVKRVKPRASRGDSAEHFLLARGFK 247
>gi|89900795|ref|YP_523266.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodoferax ferrireducens
T118]
gi|122479248|sp|Q21WW8|RLME_RHOFD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|89345532|gb|ABD69735.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rhodoferax ferrireducens
T118]
Length = 224
Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 14/222 (6%)
Query: 19 NRSCQGSSR---DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLG 75
+S SS+ WLN H+ND YV+ A+LEG+RAR+AYKL +I+E +++ + +VDLG
Sbjct: 1 MKSQTKSSKVNRAWLNDHVNDTYVKLAKLEGYRARAAYKLKEIDETLGLIKPGQLVVDLG 60
Query: 76 SSPGSWSQVAARITGSNAN----------NTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
S+PG+WSQ R N ++A+DIL MEP+ GV F + DF + D
Sbjct: 61 STPGAWSQYVRRKMSPKTATGGGAAVGALNGTIIALDILPMEPVEGVVFLQGDFRESDVL 120
Query: 126 EFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
+ + G DLVLSDMA G D R +L E A FA + G + K F
Sbjct: 121 LQLEAEMKGRQADLVLSDMAPNLSGIDSADAARIENLVELALEFAQNHMKPEGALVAKVF 180
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G + + ++ K+ F V +KP ASR +S E FL+ G +
Sbjct: 181 HGASYDPLVKRFKETFLLVKRIKPKASRDKSSETFLVGLGLK 222
>gi|168042748|ref|XP_001773849.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674836|gb|EDQ61339.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 110/208 (52%), Gaps = 11/208 (5%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KLLQI+E+ IL+ +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRKAKEEGWRARSAFKLLQIDEEFGILEGAKRVVDLCAAPGSWSQ 57
Query: 84 VAARI-----TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPD 137
V +R + + +VAID+ M PI GV + D + E + GG D
Sbjct: 58 VLSRKLYQPAVAAGEPHPLIVAIDLQPMAPIDGVLQIQGDITSAKTAELVIGHFDGGKAD 117
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
LV+ D A G +D L AA +L GG+F+ K F+G + + LK
Sbjct: 118 LVVCDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRPGGNFVAKIFRGKDISLLYTQLK 177
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGF 225
F V KP +SR S+E F++ +G+
Sbjct: 178 IFFPVVTCAKPKSSRNSSIEAFVVCEGY 205
>gi|255712339|ref|XP_002552452.1| KLTH0C05214p [Lachancea thermotolerans]
gi|238933831|emb|CAR22014.1| KLTH0C05214p [Lachancea thermotolerans]
Length = 303
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 10/208 (4%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EG+RARSA+KLLQ++E+ L + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDLYYRKAKEEGYRARSAFKLLQLDEQFHFLDNVTRVVDLCAAPGSWSQ 57
Query: 84 VAARIT----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
V +R N ++ R+VA+D+ M PI V + D + I G D
Sbjct: 58 VLSRRLFDDDTENNSSKRIVAVDLQPMFPIDNVTTIQADITHPKTLNKIMDLFEGEKADF 117
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V SD A G +D L +A +L GG F+ K F+G + + L
Sbjct: 118 VCSDGAPDVTGLHDLDEYVQQQLILSALQLTTCLLREGGVFVAKIFRGRDIDMLYSQLSF 177
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F++V+ KP +SR S+E F++ G+R
Sbjct: 178 LFERVVCAKPRSSRGTSLESFIVCLGYR 205
>gi|238899017|ref|YP_002924699.1| 23S rRNA methyltransferase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259494566|sp|C4K7K8|RLME_HAMD5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|229466777|gb|ACQ68551.1| 23S rRNA methyltransferase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 208
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 4/199 (2%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
WL H ND YV AQ + R+R+ +KL +I+ +I + ++DLG++PG WSQ
Sbjct: 13 WLQEHFNDKYVIEAQKKKLRSRAWFKLDEIDNTDKIFKRGMFVLDLGAAPGGWSQYVVNK 72
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPT 147
G +V+A+D+L M+ ILGV+F + DF + + + D+V+SDMA
Sbjct: 73 VGLK---GKVIALDLLPMDSILGVEFLQGDFREKSILKRLLNCIGDKKIDVVISDMAPNM 129
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G +D ++M L E A + ++L GG FLVK FQG L ++ F+KV K
Sbjct: 130 TGISSVDIPKSMHLAELAFDISRDILIPGGSFLVKVFQGEGFEQYLREMRSLFKKVKVRK 189
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASR S E++++A G +
Sbjct: 190 PDASRIRSREVYIVATGLK 208
>gi|58584834|ref|YP_198407.1| 23S rRNA methylase [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|75497746|sp|Q5GS59|RLME_WOLTR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|58419150|gb|AAW71165.1| 23S rRNA methylase [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 216
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 136/213 (63%), Gaps = 9/213 (4%)
Query: 14 TQKVKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+VK + + SS WL+RH+ND YVQ+ + +R+RSAYKL++I+ K ++LQ+ ++IV
Sbjct: 5 KTRVKTAKGRKLSSTRWLHRHLNDQYVQKTNKDSYRSRSAYKLIEIDNKFKLLQAGQKIV 64
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG+SPG WSQVA++ +VVAIDI + I GVK+ ++D +L++
Sbjct: 65 DLGASPGGWSQVASQ------KGVKVVAIDIKPVNTISGVKYIQYDINELETLRER--FK 116
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D++LSDMA + G + +DH+R M LCEAA FA LN GG F+VK FQG + D
Sbjct: 117 DQKFDVILSDMAPESCGLKSLDHIRIMLLCEAALNFAKHFLNYGGKFVVKIFQGESDKDF 176
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
LKK F+ V + KP +SR+ES EM+L+ GF
Sbjct: 177 YNELKKMFKIVKYFKPKSSRSESTEMYLVGLGF 209
>gi|260220960|emb|CBA29048.1| Ribosomal RNA large subunit methyltransferase J [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 205
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
++ HINDPYV+ A EG+RAR+AYKL +I+E +++ + +VDLG +PG+WSQ R
Sbjct: 1 MHDHINDPYVKLANKEGYRARAAYKLKEIDEALHLVKPGQLVVDLGCTPGAWSQYLRRRM 60
Query: 90 GSNA-----NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDM 143
N ++ +D+L MEPI GV F + DF ++++ + A+GG DLV+SDM
Sbjct: 61 SPQGAAVGEMNGTIIGLDLLPMEPIEGVTFIQGDFREVETLAKLEAALGGQKADLVVSDM 120
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
A G D R L E A FA + G + K F GG+ N+++ K+ F V
Sbjct: 121 APNLSGISSADAARVEYLVELAIEFAQNHMKPQGALVAKVFHGGSYNEVVQRFKQAFVTV 180
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
+KP ASR S E FL+ G +
Sbjct: 181 KPLKPKASRDRSSETFLIGLGLK 203
>gi|330506929|ref|YP_004383357.1| ribosomal RNA large subunit methyltransferase J [Methanosaeta
concilii GP-6]
gi|328927737|gb|AEB67539.1| ribosomal RNA large subunit methyltransferase J [Methanosaeta
concilii GP-6]
Length = 256
Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 114/196 (58%), Gaps = 5/196 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ R D Y ++A+ EG+RARSAYKLLQINEK +++ +VDLG++PG W QVA +++
Sbjct: 1 MARDQKDHYYRKAKEEGYRARSAYKLLQINEKFHVIKKGDSVVDLGAAPGGWLQVAQKLS 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
G ++V +D+ + PI GV F+ D L + + ++ A+GG+ D+V+ D A G
Sbjct: 61 G-----GKIVGVDLEGITPIPGVVTFRADITALSTVDQVKDALGGDADVVICDAAPNLSG 115
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
DH ++ L +A A ++L G+F+VK FQG D L +++ F V P
Sbjct: 116 AWDRDHAISIDLARSALEMAKKLLRPRGNFVVKVFQGDMFIDFLNDVRREFAVVHAHSPA 175
Query: 210 ASRAESVEMFLLAKGF 225
ASR ES E +++ K
Sbjct: 176 ASRKESAETYVVGKKL 191
>gi|302819760|ref|XP_002991549.1| hypothetical protein SELMODRAFT_133851 [Selaginella moellendorffii]
gi|300140582|gb|EFJ07303.1| hypothetical protein SELMODRAFT_133851 [Selaginella moellendorffii]
Length = 302
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 17/215 (7%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KLLQI+E+ ILQ +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRKAKEEGWRARSAFKLLQIDEEFGILQGVKRVVDLCAAPGSWSQ 57
Query: 84 VAARIT-----------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
V +R + +VAID+ M PI GV + D + E + Q
Sbjct: 58 VLSRQLYVPSKNLSLCSSRQDDRPLIVAIDLQPMAPIDGVVQIQGDITSARTAELVIQHF 117
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G DLV+ D A G +D L AA +L G F+ K F+G +
Sbjct: 118 HGCKADLVVCDGAPDVTGLHDMDEFVQAQLILAALTIVTHVLRPGAKFVAKVFRGKDISL 177
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ LK F V KP +SR S+E F++ + ++
Sbjct: 178 LYAQLKMFFTTVTCTKPKSSRNSSIEAFVVCEDYQ 212
>gi|224070396|ref|XP_002195665.1| PREDICTED: FtsJ homolog 2 (E. coli) [Taeniopygia guttata]
Length = 234
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 7/230 (3%)
Query: 4 PPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
S+ R L VK G+ + WL RH+ DP+V+ ++ + +R RSA+KLL+I++K +
Sbjct: 3 GAASAGGRYLHTTVKFLRKTGAEQRWLERHLKDPFVKASKQQHYRCRSAFKLLEIDDKLR 62
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNA-----NNTRVVAIDILDMEPILGVKFFKFD 118
+L+ ++D G++PG+WSQVA + + V+ +D+L + P+ G F
Sbjct: 63 VLRPGFSVLDCGAAPGAWSQVAVQRVNALGTDAAVPTGFVLGVDLLRISPLEGAVFLSET 122
Query: 119 FLDLDS--WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
+ S G D++LSDMA G +++DH + +SLC + +L
Sbjct: 123 DMAEPSTLRAIQSLLPLGKADVILSDMAPNATGIKELDHQKLISLCLGLLDMSQSILKPK 182
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G L K + G + LK+ FQ V +KP ASR +S E + LA+ +R
Sbjct: 183 GTMLCKFWDGSEARLLQNRLKEQFQDVRTIKPQASRKDSAESYYLARLYR 232
>gi|167836218|ref|ZP_02463101.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
thailandensis MSMB43]
Length = 220
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 10/212 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARI---------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN- 135
+ +VA+D+L MEPI V F + DF + + + + G
Sbjct: 67 RNKLAQGSRRDAVREGGIDGTIVALDMLPMEPIADVHFIQGDFREESVLHQLEEVLAGRS 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVAVADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K F+ V KP ASR +S E F+L + ++
Sbjct: 187 FKHQFKTVAPRKPKASRDKSSETFILGRHLKQ 218
>gi|293350731|ref|XP_001062916.2| PREDICTED: Ftsj homolog 1 (E. coli)-like [Rattus norvegicus]
gi|293362770|ref|XP_343772.4| PREDICTED: Ftsj homolog [Rattus norvegicus]
Length = 324
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ +GWRARSA+KLLQ++E+ Q+ + +R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKEKGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
++ +VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQSSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPK 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|116754447|ref|YP_843565.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanosaeta thermophila
PT]
gi|121694084|sp|A0B8A1|RLME_METTP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|116665898|gb|ABK14925.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanosaeta thermophila
PT]
Length = 255
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 114/196 (58%), Gaps = 5/196 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ R D Y ++A+ EG+RARSAYKL QIN+K I++ R+VDLG++PG W QVA ++
Sbjct: 1 MARDQKDHYYRKAKEEGYRARSAYKLKQINDKFHIIRRGSRVVDLGAAPGGWLQVARELS 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
G VV +D+ +EP+ G+ + D ++ E I A+GG D+V+SD A G
Sbjct: 61 G-----GIVVGVDLERIEPLEGIVTIQGDITKEETLEQIAAALGGQADVVISDAAPNLSG 115
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+DH R++ L AA A +L GG FLVK FQG ND L +K+ F V P
Sbjct: 116 IWDVDHARSIDLSRAALRIAKRLLRPGGSFLVKVFQGDMFNDYLEEVKREFSSVHAYTPP 175
Query: 210 ASRAESVEMFLLAKGF 225
ASR ES E++++ K
Sbjct: 176 ASRKESAEIYVIGKKL 191
>gi|195395790|ref|XP_002056517.1| GJ10992 [Drosophila virilis]
gi|194143226|gb|EDW59629.1| GJ10992 [Drosophila virilis]
Length = 254
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS+DWL R + DPYV++A++ +R RSA+KLL++++K++IL+ ++D G++PG
Sbjct: 34 KGKSKSSQDWLIRQLADPYVEKARMLNFRCRSAFKLLEMDDKYKILKPGDVVLDCGAAPG 93
Query: 80 SWSQVAARITGSNANNTR-----VVAIDILDMEPILGVK-FFKFDFLDLDSWEFIRQAIG 133
SW+QVAA T +N R V +ID+L + G F DF + + +R+++
Sbjct: 94 SWTQVAAERTNANGKVERAPRGAVYSIDLLHFHAVPGATIFGGMDFTTPLAQQRLRESLA 153
Query: 134 GNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G + VLSDMA G R +D +LC FAL M + +VK + G +
Sbjct: 154 GRQVNCVLSDMAPNATGVRMLDQESITNLCYEVLKFALAMSAPQANLVVKIWDNGDVPKL 213
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ H++KV VKP ASR +S E FLLA+G++
Sbjct: 214 ERDILCHYEKVKRVKPRASRGDSAEHFLLARGYK 247
>gi|118594568|ref|ZP_01551915.1| cell division protein FtsJ [Methylophilales bacterium HTCC2181]
gi|118440346|gb|EAV46973.1| cell division protein FtsJ [Methylophilales bacterium HTCC2181]
Length = 205
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+S+ W+N H++DPYV +A++ G+R+R+A+KLL+ NEK L +VDLGS+PGS
Sbjct: 2 KRSKTSKSWMNEHVSDPYVHKAKIAGYRSRAAFKLLEANEKFNFLTKKMNVVDLGSAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLV 139
WSQV +++TG N N + A+D+L+M PI V+F K DF + + + ++ + DLV
Sbjct: 62 WSQVISQMTGCNGN---IFALDLLEMVPIKNVEFLKGDFREQEMLDSLEKKLGKTSLDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G + D + L E A F+ + L G FLVK+F G + + +KH
Sbjct: 119 ISDMAPNISGIKTSDQAGIIHLNELALQFSTDWLKPNGCFLVKSFVGAEFDGFVAETRKH 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KV KP +SR S E+F+ +
Sbjct: 179 FEKVTTFKPASSRDRSSEIFVFGRNK 204
>gi|83718666|ref|YP_443289.1| FtsJ-like methyltransferase [Burkholderia thailandensis E264]
gi|167621275|ref|ZP_02389906.1| FtsJ-like methyltransferase [Burkholderia thailandensis Bt4]
gi|257139525|ref|ZP_05587787.1| FtsJ-like methyltransferase [Burkholderia thailandensis E264]
gi|123536418|sp|Q2SUW0|RLME_BURTA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|83652491|gb|ABC36554.1| FtsJ-like methyltransferase [Burkholderia thailandensis E264]
Length = 220
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 10/211 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARI---------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN- 135
+ ++A+D+L MEPI V F + DF + + + + G
Sbjct: 67 RNKLAQGRRRDAVREGGIDGTIIALDMLPMEPIADVHFIQGDFREETVLHQLEEVLAGRS 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVAVADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F+ V KP ASR +S E F+L + +
Sbjct: 187 FKHQFKTVAPRKPKASRDKSSETFILGRHLK 217
>gi|114330999|ref|YP_747221.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosomonas eutropha
C91]
gi|122314099|sp|Q0AHC6|RLME_NITEC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|114308013|gb|ABI59256.1| 23S rRNA Um-2552 2'-O-methyltransferase [Nitrosomonas eutropha C91]
Length = 206
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 82/204 (40%), Positives = 113/204 (55%), Gaps = 4/204 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+SR W+ HIND +V++A EG+R+R+AYKL +I E+ + +VDLG+SPGS
Sbjct: 2 KSARTSRAWIKAHINDNFVRKANHEGYRSRAAYKLQEIAERDALFSPGMTVVDLGASPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVA G +V A+D+LDM+ + G F + DF + + + + G DLV
Sbjct: 62 WSQVALESVGPT---GKVFALDMLDMQSLPGATFIQGDFRENGVLAALEKVLDGKRADLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDM+ G R D M L E A F E LN G +FLVK FQG L++
Sbjct: 119 ISDMSPNLTGIRVSDQAHGMYLAELALMFCREHLNPGENFLVKVFQGSDFEAFRQLMQAD 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAK 223
F KV+ KP ASR S E++LL
Sbjct: 179 FAKVVIRKPKASRDRSKELYLLGL 202
>gi|254252702|ref|ZP_04946020.1| 23S rRNA methylase [Burkholderia dolosa AUO158]
gi|124895311|gb|EAY69191.1| 23S rRNA methylase [Burkholderia dolosa AUO158]
Length = 220
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 10/212 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQHWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARI---------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+ +VA+D+L MEPI V F + DF + D + + G P
Sbjct: 67 RNKLAQGKRRDAVREGGIDGTIVALDMLPMEPIADVHFIQGDFREDDVLHQLEDVLEGRP 126
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K+ F+ V KP ASR +S E F+L + ++
Sbjct: 187 FKQQFKVVAPRKPKASRDKSSETFILGRHLKQ 218
>gi|332283363|ref|YP_004415274.1| ribosomal RNA large subunit methyltransferase j [Pusillimonas sp.
T7-7]
gi|330427316|gb|AEC18650.1| ribosomal RNA large subunit methyltransferase j [Pusillimonas sp.
T7-7]
Length = 211
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 124/208 (59%), Gaps = 3/208 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ S+DW+ +HINDPYV+ AQ +G+RAR+A+KL +I + +++Q +VDLGS+PGSW
Sbjct: 3 KKKFSKDWVMQHINDPYVKMAQQKGYRARAAFKLTEILDAEKLMQPGDIVVDLGSAPGSW 62
Query: 82 SQVAARITGSNAN--NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
SQVA + R++A+D+L MEPI GV+F + DF + E ++ +G DL
Sbjct: 63 SQVARERLAGAGGVVDGRIIALDMLPMEPIAGVEFIQGDFREDIMLEQLKNLLGDAQVDL 122
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G D R +C+ A FA + L G +VK F G + I+ K+
Sbjct: 123 VISDMAPNLSGVSSADSARIQHVCDLALDFACQHLKPEGALIVKAFHGSGFSQIVESFKR 182
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F +V+ KP ASR +S E FL+A+ +
Sbjct: 183 CFLRVVERKPKASRDKSSETFLVARRLK 210
>gi|254572155|ref|XP_002493187.1| 2'-O-ribose methyltransferase, methylates the 2'-O-ribose of
nucleotides [Pichia pastoris GS115]
gi|238032985|emb|CAY71008.1| 2'-O-ribose methyltransferase, methylates the 2'-O-ribose of
nucleotides [Pichia pastoris GS115]
gi|328352798|emb|CCA39196.1| ribosomal RNA large subunit methyltransferase E [Pichia pastoris
CBS 7435]
Length = 311
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 110/202 (54%), Gaps = 6/202 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR--- 87
++ D Y +RA+ EGWRARSA+KLLQ+NE+ + + RR+VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDLYYRRAKEEGWRARSAFKLLQLNEQFNLFKDVRRVVDLCAAPGSWSQVLSRELY 64
Query: 88 --ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+ ++ ++VA+D+ M PI GV + D + E I + GG P D V SD A
Sbjct: 65 EKQSNNSETPAKIVAVDLQPMSPIDGVTTLQADITHPKTLEKILEIFGGEPADFVCSDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G +D L +A +L GG F+ K F+G + + + F+ V
Sbjct: 125 PDVTGLHDLDEYIQSQLILSALQLTTCILKPGGSFVAKIFRGKDIDLLYSQMGFLFEHVT 184
Query: 205 HVKPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ +G+R
Sbjct: 185 CAKPRSSRGTSLESFIVCQGYR 206
>gi|171059499|ref|YP_001791848.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Leptothrix cholodnii
SP-6]
gi|226703309|sp|B1XXG3|RLME_LEPCP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|170776944|gb|ACB35083.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Leptothrix cholodnii
SP-6]
Length = 232
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 76/223 (34%), Positives = 115/223 (51%), Gaps = 12/223 (5%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
K+ +S + + + W N HI+D YV+ A EG+R+R+AYK+ +I+E +++ + +VDL
Sbjct: 1 MKINTKSKKVN-KAWFNDHIHDTYVKLAHKEGYRSRAAYKIKEIDETCGLIRPGQVVVDL 59
Query: 75 GSSPGSWSQVAARITGSNAN----------NTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
G+ PG+WSQ R N R++A+D+L EP+ GV F + DF +
Sbjct: 60 GAVPGAWSQYVRRRFAPREAGVGGAAAGELNGRIIALDLLPFEPLEGVAFLQGDFCEEAV 119
Query: 125 WEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ + G D+VLSDMA G D R +L E A FA L G + K
Sbjct: 120 LAQLVGLLDGRAVDVVLSDMAPNLSGVEVTDAARIANLVELALEFAQSHLKPQGALVCKV 179
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F G + ++ K+ F+ V VKP ASR S E FL+ G +
Sbjct: 180 FHGSGYSQLVDQFKRTFRVVKAVKPKASRDRSAETFLVGIGLK 222
>gi|291407431|ref|XP_002719910.1| PREDICTED: FtsJ homolog 1 [Oryctolagus cuniculus]
Length = 331
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 106/196 (54%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ + R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ +VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGQVVAVDLQAMAPLPGVTQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPK 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|145347186|ref|XP_001418056.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578284|gb|ABO96349.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 297
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KLLQI+E I + R +VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRKAKEEGWRARSAFKLLQIDESFDIFRDVRHVVDLCAAPGSWSQ 57
Query: 84 VAARITG--------SNANNTRVVAIDILDMEPILGVKFFKFDFL-DLDSWEFIRQAIGG 134
V +R ++VAID+ M PI GV + D E + G
Sbjct: 58 VLSRKLYLPALARGVEEEELPKIVAIDLQPMAPIEGVTTIQGDITSMDKVREVLSHFDGK 117
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
+ DL++ D A G +D L A A +L GG F+ K F+G + +
Sbjct: 118 HADLIVGDGAPDVTGLHDLDEFMQAQLILAGLTVATHILKPGGTFIAKIFRGKDISLLYS 177
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
LK F +V KP +SR S+E F++ +G+
Sbjct: 178 QLKIFFPEVTCAKPKSSRNSSIEAFIVCQGY 208
>gi|312795597|ref|YP_004028519.1| 23S rRNA Um2552 2'-O-methyltransferase [Burkholderia rhizoxinica
HKI 454]
gi|312167372|emb|CBW74375.1| 23S rRNA Um2552 2'-O-methyltransferase (EC 2.1.1.-) [Burkholderia
rhizoxinica HKI 454]
Length = 228
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 117/208 (56%), Gaps = 7/208 (3%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ +G+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 17 NQSWLHDHINDPYVKLAQRDGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 76
Query: 86 ARIT------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDL 138
S + ++A+D+L MEPI V F + DF D + A+ G DL
Sbjct: 77 RNKLAAGSHRASGGIDGTIIALDMLPMEPIADVTFIQGDFRDDAVLAQLEAAVEGRAVDL 136
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G D R +C+ A FA L G LVK F G + I+ K
Sbjct: 137 VISDMAPNLSGVAVADAARIEHVCDLALEFAQNHLTSQGALLVKCFHGSGYSQIVERFKH 196
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP ASR +S E F+L + +
Sbjct: 197 QFRSVAARKPKASRDKSSETFILGRMLK 224
>gi|167582305|ref|ZP_02375179.1| FtsJ-like methyltransferase [Burkholderia thailandensis TXDOH]
Length = 220
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 10/211 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARI---------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN- 135
+ +VA+D+L MEPI V F + DF + + + + G
Sbjct: 67 RNKLAQGRRRDAVREGGIDGTIVALDMLPMEPIADVHFIQGDFREEAVLHQLEEVLAGRS 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVAVADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F+ V KP ASR +S E F+L + +
Sbjct: 187 FKHQFKTVAPRKPKASRDKSSETFILGRHLK 217
>gi|156368067|ref|XP_001627518.1| predicted protein [Nematostella vectensis]
gi|156214430|gb|EDO35418.1| predicted protein [Nematostella vectensis]
Length = 316
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 71/207 (34%), Positives = 102/207 (49%), Gaps = 11/207 (5%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ EGWRARSA+KLLQ+NE + ++VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDIYYRLAKEEGWRARSAFKLLQLNEDFDLFSGVSKVVDLCAAPGSWSQV 58
Query: 85 AARIT-----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
+R ++VA+D+ M P+ GV + D + I G DL
Sbjct: 59 LSRKLIEEKQDEEGEKPKIVAVDLQAMAPLPGVIQIQGDITKTSTANQIISHFEGEHADL 118
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+ D A G ID L AA +L GG+F+ K F+G + + LK
Sbjct: 119 VICDGAPDVTGLHDIDEYIQGQLLLAALNITTHVLKPGGNFVAKIFRGKDVSLLYAQLKV 178
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGF 225
F V KP +SR S+E F++ +G+
Sbjct: 179 FFPTVTICKPRSSRNSSIESFVVCQGY 205
>gi|167562362|ref|ZP_02355278.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
oklahomensis EO147]
gi|167574341|ref|ZP_02367215.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
oklahomensis C6786]
Length = 220
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 10/212 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARI---------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+ ++A+D+L MEPI V F + DF + D + + + G P
Sbjct: 67 RNKLAQGKRRDTVREGGIDGTIIALDMLPMEPIADVHFIQGDFREDDVLGQLEELLAGRP 126
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVAVADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K F+ V KP ASR +S E F+L + ++
Sbjct: 187 FKHQFKMVAPRKPKASRDKSSETFILGRHLKQ 218
>gi|190345428|gb|EDK37311.2| hypothetical protein PGUG_01409 [Meyerozyma guilliermondii ATCC
6260]
Length = 293
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 74/206 (35%), Positives = 109/206 (52%), Gaps = 8/206 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y +RA+ EGWRARSA+KLLQ++E+ + +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDLYYRRAKEEGWRARSAFKLLQLDEEFGLFSGVKRVVDLCAAPGSWSQ 57
Query: 84 VAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
V +R S + ++VA+D+ M PI GV + D + + I GG P D V
Sbjct: 58 VLSREIYKNSKGEDAKIVAVDLQPMTPIDGVITLQADITHPKTLQRILDIFGGEPADFVC 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G +D L A +L GG F+ K F+G + + L F
Sbjct: 118 SDGAPDVTGLHDLDEYIQAQLVLCALQLTTCVLKEGGTFVAKIFRGRDIDLLYSQLGHLF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
++V+ KP ASR S+E F++ G++
Sbjct: 178 ERVVCAKPRASRGTSLEAFIVCIGYK 203
>gi|167626618|ref|YP_001677118.1| ribosomal RNA large subunit methyltransferase J [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|189040691|sp|B0TZQ8|RLME_FRAP2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|167596619|gb|ABZ86617.1| ribosomal RNA large subunit methyltransferase J [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 206
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 127/207 (61%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S +++ W+ H +D YV +A G+R+R+++K+++I +K+ + + N I+DLG++PG
Sbjct: 2 SKGSTTKKWIQDHTSDYYVLQANKLGYRSRASFKIIEIQDKYNLFKQNMFIIDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNPDLV 139
WS+ + G+N +++A+D+L+M PI GV+F + +F +++E + Q D V
Sbjct: 62 WSEQVVKFIGNN---GKLIALDLLEMAPIAGVEFIQGNFSSDETYERLNQLINDKKIDCV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ D R++ L E A FA LN G F+ K FQG +++ L L+++
Sbjct: 119 ISDMAPNLSGNKTSDQARSIHLLELALDFATTNLNRNGSFVAKVFQGQGSDEYLKLVRES 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV KP +SR +S E +++A GF+
Sbjct: 179 FNKVTQFKPKSSRPKSREFYVVATGFK 205
>gi|167526100|ref|XP_001747384.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774219|gb|EDQ87851.1| predicted protein [Monosiga brevicollis MX1]
Length = 302
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 2/197 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y ++A+ EG+RARSA+KLLQ++E+ I ++ R+VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIYYRQAKEEGYRARSAFKLLQLDEEFDIFRNVERVVDLCAAPGSWSQVLSQKLR 64
Query: 91 S-NANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTI 148
+ ++VA+D+ M P+ GV + D + E ++ GG DLV+SD A
Sbjct: 65 PTENDRVKIVAVDLQAMAPLPGVIQMQGDITKEATAQEIVQHFDGGYADLVVSDGAPDVT 124
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G ID L AA + +L GG F+ K F+G + L+ F V KP
Sbjct: 125 GLHDIDEYVQSQLILAALNISTHVLKRGGTFIAKIFRGRDVQLLYAQLETFFDVVTCSKP 184
Query: 209 VASRAESVEMFLLAKGF 225
+SR S+E F++ G+
Sbjct: 185 RSSRNSSIEAFVVCVGY 201
>gi|71083352|ref|YP_266071.1| FtsJ-like methyltransferase [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762218|ref|ZP_01264183.1| FtsJ-like methyltransferase [Candidatus Pelagibacter ubique
HTCC1002]
gi|83305663|sp|Q4FMX1|RLME_PELUB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|71062465|gb|AAZ21468.1| FtsJ-like methyltransferase [Candidatus Pelagibacter ubique
HTCC1062]
gi|91718020|gb|EAS84670.1| FtsJ-like methyltransferase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 203
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S++W+N+ D YV+++Q++G+RARSAYKL++I+EK +I ++ ++DLG+SPGS
Sbjct: 2 KKNRISKNWINKQKRDIYVRQSQVDGYRARSAYKLIEIDEKFKIFKNGISVIDLGASPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL 140
WSQ +R S R+V+ID+ ME I K DF DL+S E I+ D+V+
Sbjct: 62 WSQYISRTVKS----GRLVSIDLKGMEEIENTIQIKGDFTDLESQEKIKALFKSKVDVVV 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA T G + ID + T L A F+ EML G F+ K F G + N+I+ L KK F
Sbjct: 118 SDMAVNTTGIKDIDAIYTGELAMEAMNFSKEMLVKEGRFVSKIFLGSSFNEIVALGKKLF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
++V KP +SR ES E F++ K R
Sbjct: 178 KEVKVFKPKSSRKESKESFIICKILR 203
>gi|328675584|gb|AEB28259.1| Cell division protein ftsJ / Ribosomal RNA large subunit
methyltransferase J [Francisella cf. novicida 3523]
Length = 206
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 77/207 (37%), Positives = 129/207 (62%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S S++ WL+ H +D YV +A G+R+R+++K+L+I +K+Q+ + N +VDLG++PG
Sbjct: 2 SKGSSTKKWLHEHTSDYYVIQANKLGYRSRASFKILEIQDKYQLFKPNMFVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WS+ + G N +++A+D+L+M PI GV+F + DF D+++ + + D V
Sbjct: 62 WSEQVIKYIGKN---GKLIALDLLEMAPIAGVEFIQGDFCSDDTYQKLNTLVNNQKIDCV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ D +++ L E A FA LN G F+ K FQG +++ L L++
Sbjct: 119 ISDMAPNLSGNKTSDQAKSIYLLELALDFANMNLNKNGSFVAKVFQGEGSDEYLKLVRDS 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KVI KP +SRA+S E +++A GF+
Sbjct: 179 FNKVIQFKPKSSRAKSREFYVIATGFK 205
>gi|159475208|ref|XP_001695715.1| tRNA-2'-O-ribose methyltransferase [Chlamydomonas reinhardtii]
gi|158275726|gb|EDP01502.1| tRNA-2'-O-ribose methyltransferase [Chlamydomonas reinhardtii]
Length = 323
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 74/209 (35%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D + ++A+ EGWRARSAYKLLQI+E I VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIFYRKAKEEGWRARSAYKLLQIDEAFDIFSGVEHAVDLCAAPGSWSQ 57
Query: 84 VAARIT------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
V +R N N +VA+D+ M PI GV + D + + + G P
Sbjct: 58 VLSRKLFLPALRAGNPNPPTIVAVDLQPMAPIEGVVQLQGDITSEATAKQVISHFHGQPA 117
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLV+ D A G +D L AA +L GG F+ K F+G + L
Sbjct: 118 DLVVCDGAPDVTGLHDLDEYVQAQLLLAALSIVCAVLRPGGTFVAKIFRGKDVALLYSQL 177
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
K F +V KP +SR S+E F++ + F
Sbjct: 178 KMLFPEVYVAKPKSSRNSSIEAFVVCRRF 206
>gi|153871222|ref|ZP_02000449.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Beggiatoa sp. PS]
gi|152072314|gb|EDN69553.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Beggiatoa sp. PS]
Length = 212
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 120/209 (57%), Gaps = 4/209 (1%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
++ +RDW H N+ YV++A +EG+R+R+ YKL +I+ + ++ + IVDLG++P
Sbjct: 2 SKKRISKTRDWHKEHSNNQYVKQANIEGYRSRAVYKLTEIDARDRLFRPGMTIVDLGAAP 61
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPD 137
G WSQ AR ++ A+DIL ++P+ V F + DF + + + D
Sbjct: 62 GGWSQWIARRF---EKQVKLFALDILPIKPLPDVTFIQGDFREQTVLDTLLNHLDKKKVD 118
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
LV+SDMA G + ID R + L E A FAL++L G FL K FQG + LK
Sbjct: 119 LVISDMAPNISGIKAIDQPRIIELAELARDFALDVLITNGHFLTKVFQGEDFDIFTKSLK 178
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
HF++V+ KP ASR++S E+++LAK +
Sbjct: 179 SHFKQVVIRKPTASRSQSSEVYVLAKQLK 207
>gi|291222138|ref|XP_002731075.1| PREDICTED: FtsJ homolog 1-like [Saccoglossus kowalevskii]
Length = 361
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 104/204 (50%), Gaps = 8/204 (3%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ EGWRARSA+KLLQINE+ I + ++VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDIYYRLAKEEGWRARSAFKLLQINEEFNIFKDVSKVVDLCAAPGSWSQV 58
Query: 85 AARITGSNAN--NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
+R + ++VA+D+ M P+ GV + D + + I G DLV+
Sbjct: 59 LSRRLRGQDREADPKIVAVDLQAMAPLPGVIQIQGDITKVSTAMEIIGHFEGEQADLVVC 118
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA +L GG F+ K F+G + LK F
Sbjct: 119 DGAPDVTGLHDLDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKIFFP 178
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
KV KP +SR S+E F++ + +
Sbjct: 179 KVTIAKPRSSRNSSIEAFVVCENY 202
>gi|119713379|gb|ABL97442.1| 23S rRNA methylase [uncultured marine bacterium EB80_69G07]
Length = 203
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 128/206 (62%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S++W+N+ D YV++++++G+RARSAYKL++I+EK ++ + ++D+G++PGS
Sbjct: 2 KKNKISKNWINKQRRDTYVRQSKVDGYRARSAYKLIEIDEKFKVFKGGISVIDIGAAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL 140
WSQ A+++ N +++ID+ ME I + DF + + I++ + D+V+
Sbjct: 62 WSQYASKVV----KNGTIISIDLKKMEKIKNTIQIEGDFTEPNIQAKIKKNLHNPIDVVM 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA T G + +D ++T LC+ A F+ ++++ G F+ K F G + N+I+ L KK F
Sbjct: 118 SDMAVNTTGIKDVDAIQTGELCKEAMIFSKDVISEKGIFIAKIFMGRSFNEIVALGKKIF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
++V KP +SR +S E F++ K R
Sbjct: 178 REVKVFKPNSSRKDSKESFIICKNLR 203
>gi|149755358|ref|XP_001492181.1| PREDICTED: similar to FtsJ homolog 2 [Equus caballus]
Length = 264
Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 82/215 (38%), Positives = 125/215 (58%), Gaps = 7/215 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ G+ WL RH+ DP+V+ A++E +R RSA+KLL++NE+HQIL+ R++D G++PG
Sbjct: 43 KGRTGAEHLWLTRHLKDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPG 102
Query: 80 SWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQAIG 133
+WSQVA + A V+ +D+L + P+ G F D D +++ IR+ +
Sbjct: 103 AWSQVAVQRVNAAGTDPGAPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTFQRIRELLP 162
Query: 134 GNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G V+ SDMA G R +DH R +SLC + A + L GG FL KT+ G ++ +
Sbjct: 163 GGRADVILSDMAPNATGIRGLDHDRLISLCLSLLDLAPDTLCPGGTFLCKTWAGSQSHRL 222
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L + FQ VKP ASR ES E++ LA +R+
Sbjct: 223 QKRLTEEFQNTKTVKPEASRKESSEVYFLATQYRR 257
>gi|62857467|ref|NP_001016817.1| FtsJ homolog 1 [Xenopus (Silurana) tropicalis]
gi|89273969|emb|CAJ81745.1| FtsJ homolog 1 (E. coli) [Xenopus (Silurana) tropicalis]
Length = 335
Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 74/206 (35%), Positives = 111/206 (53%), Gaps = 9/206 (4%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ EGWRARSA+KLLQ++E++++ Q +R VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDIYYRLAKEEGWRARSAFKLLQLDEEYRLFQGVQRAVDLCAAPGSWSQV 58
Query: 85 AARITG---SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVL 140
+R + ++VA+D+ M P+ GV + D + + E IR G DLV+
Sbjct: 59 LSRKLRGSEEQSGQVKIVAVDLQAMAPLPGVIQIQGDITKVSTAHEIIRHFEGQPADLVV 118
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G ID L AA +L GG F+ K F+G + L+ F
Sbjct: 119 CDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLRDGGTFVAKIFRGKDVTLLYSQLQIFF 178
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
++V KP +SR S+E F++ +G+R
Sbjct: 179 REVTCAKPRSSRNSSIEAFVVCQGYR 204
>gi|53718994|ref|YP_107980.1| putative ribosomal RNA large subunit methyltransferase
[Burkholderia pseudomallei K96243]
gi|53725546|ref|YP_102539.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei ATCC 23344]
gi|124383467|ref|YP_001026576.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei NCTC 10229]
gi|126438553|ref|YP_001058524.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 668]
gi|126450179|ref|YP_001080139.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei NCTC 10247]
gi|126453006|ref|YP_001065784.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 1106a]
gi|167719064|ref|ZP_02402300.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei DM98]
gi|167738062|ref|ZP_02410836.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 14]
gi|167815246|ref|ZP_02446926.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 91]
gi|167845199|ref|ZP_02470707.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei B7210]
gi|167893751|ref|ZP_02481153.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 7894]
gi|167902199|ref|ZP_02489404.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei NCTC 13177]
gi|167910441|ref|ZP_02497532.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 112]
gi|167918467|ref|ZP_02505558.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei BCC215]
gi|254178317|ref|ZP_04884972.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei ATCC 10399]
gi|254180203|ref|ZP_04886802.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 1655]
gi|254188378|ref|ZP_04894889.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei Pasteur 52237]
gi|254198319|ref|ZP_04904741.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei S13]
gi|254205763|ref|ZP_04912115.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei JHU]
gi|254261558|ref|ZP_04952612.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 1710a]
gi|254358836|ref|ZP_04975109.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei 2002721280]
gi|81379953|sp|Q63V86|RLME_BURPS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|81605295|sp|Q62L80|RLME_BURMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|143459671|sp|Q3JTT5|RLME_BURP1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|158513524|sp|A3NTW3|RLME_BURP0 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040695|sp|A3N853|RLME_BURP6 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040700|sp|A1V319|RLME_BURMS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189044089|sp|A3MIQ3|RLME_BURM7 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189044090|sp|A2S3Q7|RLME_BURM9 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|52209408|emb|CAH35353.1| putative ribosomal RNA large subunit methyltransferase
[Burkholderia pseudomallei K96243]
gi|52428969|gb|AAU49562.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei ATCC 23344]
gi|124291487|gb|ABN00756.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei NCTC 10229]
gi|126218046|gb|ABN81552.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 668]
gi|126226648|gb|ABN90188.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 1106a]
gi|126243049|gb|ABO06142.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei NCTC 10247]
gi|147753206|gb|EDK60271.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei JHU]
gi|148027963|gb|EDK85984.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei 2002721280]
gi|157936057|gb|EDO91727.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei Pasteur 52237]
gi|160699356|gb|EDP89326.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
mallei ATCC 10399]
gi|169655060|gb|EDS87753.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei S13]
gi|184210743|gb|EDU07786.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 1655]
gi|254220247|gb|EET09631.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 1710a]
Length = 220
Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 79/212 (37%), Positives = 117/212 (55%), Gaps = 10/212 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARI---------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN- 135
+ ++A+D+L MEP+ V F + DF + + + + G
Sbjct: 67 RNKLAQGKRRDAVREGGIDGTIIALDMLPMEPVADVHFIQGDFREESVLHQLEEVLAGRA 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVAVADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K F+ V KP ASR +S E F+L + ++
Sbjct: 187 FKHQFKTVAPRKPKASRDKSSETFILGRHLKQ 218
>gi|291413158|ref|XP_002722848.1| PREDICTED: FtsJ homolog 1 [Oryctolagus cuniculus]
Length = 333
Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ Q R VDL ++PG WSQV ++ TG
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGGWSQVLSQKTG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+V+A+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQEGGQVLAVDLQAMAPLPGVTQIQGDITQLSTAKEIIQHFQGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPK 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|237745683|ref|ZP_04576163.1| ribosomal RNA large subunit methyltransferase J [Oxalobacter
formigenes HOxBLS]
gi|229377034|gb|EEO27125.1| ribosomal RNA large subunit methyltransferase J [Oxalobacter
formigenes HOxBLS]
Length = 215
Score = 173 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 116/210 (55%), Gaps = 4/210 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S ++ W+ H++DP+V+ AQ EG+RAR+ YKL +I+E ++++ + IVDLG +PGS
Sbjct: 2 SKNKFNKSWMRNHLDDPFVKLAQKEGYRARAVYKLSEIDENAKLVRPGQVIVDLGCAPGS 61
Query: 81 WSQVAARITGSNANN---TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
WSQ AR G + +V +DIL MEP+ GV F + DF + + + G
Sbjct: 62 WSQYIARKLGGQGGHPVNGTIVGLDILPMEPVEGVHFLQGDFREESVLHELEALLEGRQV 121
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLVLSDMA G D R L + A FA L G LVK F G T N+IL
Sbjct: 122 DLVLSDMAPNLSGIASADAARVEYLMDLALEFAQAHLKPSGSLLVKCFNGSTYNEILKKF 181
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F V VKP ASR S EMFLL + R
Sbjct: 182 RETFVTVTPVKPKASRNYSSEMFLLGRQLR 211
>gi|78065909|ref|YP_368678.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp. 383]
gi|123568833|sp|Q39HN2|RLME_BURS3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|77966654|gb|ABB08034.1| 23S rRNA Um-2552 2'-O-methyltransferase [Burkholderia sp. 383]
Length = 220
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 10/212 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQHWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGATPGSWSQYA 66
Query: 86 ARITGSNANN---------TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+VA+DIL MEPI V F + DF + + + + + G
Sbjct: 67 RNKLAQGKKRDTEREGGIDGTIVALDILPMEPIADVHFLQGDFREDEVLHQLEEVLEGRD 126
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R LC+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHLCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K+ F+ V KP ASR +S E F+L + ++
Sbjct: 187 FKQQFKTVAPRKPKASRDKSSETFILGRHLKR 218
>gi|148225294|ref|NP_001089803.1| FtsJ homolog 2 [Xenopus laevis]
gi|76779644|gb|AAI06596.1| MGC131369 protein [Xenopus laevis]
Length = 246
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 119/215 (55%), Gaps = 7/215 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
++ + + WL R + DPY++ AQ +R RSA+KLL+I+ KH IL ++D G++PG
Sbjct: 29 KNRTAAEQKWLARQMKDPYIKEAQAHNYRCRSAFKLLEIDSKHHILHPGHHVIDCGAAPG 88
Query: 80 SWSQVAARITGSNANN-----TRVVAIDILDMEPILGVKFF-KFDFLDLDSWEFIRQ-AI 132
+WSQVA S + VV +D+L++ P+ G F D D D+ I
Sbjct: 89 AWSQVAVEKVNSLGRDSAARAGFVVGVDLLNITPLDGAVFLSNSDITDSDTQRKIISVLP 148
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G D++LSDMA G R +DH R +++C + + +L GG FL K + G + +
Sbjct: 149 SGKADVILSDMAPNATGIRDLDHQRLVNMCLSLLELSQRVLLPGGTFLCKVWDGSEISLV 208
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L++ FQ V VKP ASR ES E++LLAK ++
Sbjct: 209 RDRLRQRFQDVRTVKPKASRMESAEIYLLAKMHKQ 243
>gi|298400891|gb|ADI81765.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 71/200 (35%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV +
Sbjct: 2 SKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLR 61
Query: 91 ---SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYP 146
N ++ ++VA+D+ M + GVK + D + + E I++ G DLV+ D A
Sbjct: 62 QNTPNTDDVKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIKEFEGLKADLVVCDGAPD 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G ID L AA +L GG F+ K F+G + LK F V
Sbjct: 122 VTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVS 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 182 KPRSSRNSSIEAFVICQNYK 201
>gi|321474858|gb|EFX85822.1| hypothetical protein DAPPUDRAFT_309098 [Daphnia pulex]
Length = 302
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 104/198 (52%), Gaps = 3/198 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KLLQI+E+ +I + + VDL ++PGSWSQV R
Sbjct: 5 SKDKRDVYYRLAKEEGWRARSAFKLLQIDEEFRIFEGVKNAVDLCAAPGSWSQVLTRKLH 64
Query: 91 SNANNT--RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPT 147
+ N ++VA+D+ M P+ GV + D L + E I G DLV+ D A
Sbjct: 65 NKDENVSAKIVAVDLQAMAPLPGVIQIQGDITQLSTAEKIISYFEGEKADLVVCDGAPDV 124
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G ID L AA +L GG F+ K F+G + L+ F KV K
Sbjct: 125 TGLHDIDEYVQAQLLLAALNITTHVLKDGGIFVAKIFRGRDITLLYSQLRIFFPKVTVAK 184
Query: 208 PVASRAESVEMFLLAKGF 225
P++SR S+E F++ + +
Sbjct: 185 PMSSRNSSIEAFVVCQNY 202
>gi|149927097|ref|ZP_01915355.1| ribosomal RNA large subunit methyltransferase j [Limnobacter sp.
MED105]
gi|149824318|gb|EDM83538.1| ribosomal RNA large subunit methyltransferase j [Limnobacter sp.
MED105]
Length = 211
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 88/197 (44%), Positives = 118/197 (59%), Gaps = 3/197 (1%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR-ITGS 91
HINDPYV+ A G+RAR+A+KL +I E +L+ ++VDLGS+PGSWSQV + G
Sbjct: 15 HINDPYVKMATNAGYRARAAFKLKEIAEPEGLLKPGIKVVDLGSAPGSWSQVLREALVGP 74
Query: 92 NA-NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
N R++A+D+L MEPI GV+F + DF D E + Q +GG DLV+SDMA G
Sbjct: 75 GGVINGRIIALDLLPMEPIAGVEFIQGDFRDEAVLEDLNQRLGGEKLDLVVSDMAPNLSG 134
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
D R +CE A FAL L G +VK F G + ++I+ +K+ F+ V KP
Sbjct: 135 VAAADSARIEHVCELAIDFALNHLKPNGALIVKIFHGSSYSNIVHQMKQVFKSVSPRKPK 194
Query: 210 ASRAESVEMFLLAKGFR 226
ASR S E FLL KG +
Sbjct: 195 ASRDRSRETFLLCKGLK 211
>gi|298400883|gb|ADI81761.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 72/200 (36%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV +
Sbjct: 2 SKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLR 61
Query: 91 ---SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYP 146
SN ++ ++VA+D+ M + GVK + D + + E I++ G DLV+ D A
Sbjct: 62 QNTSNTDDVKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIKEFEGLKADLVVCDGAPD 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G ID L AA +L GG F+ K F+G + LK F V
Sbjct: 122 VTGLHDIDEYVQSQLLLAALNITTHILKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVS 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 182 KPRSSRNSSIEAFVICQNYK 201
>gi|298400955|gb|ADI81797.1| cell division protein [Heliconius cydno cordula]
gi|298400957|gb|ADI81798.1| cell division protein [Heliconius cydno cordula]
gi|298400961|gb|ADI81800.1| cell division protein [Heliconius cydno cordula]
gi|298400969|gb|ADI81804.1| cell division protein [Heliconius cydno cordula]
gi|298400971|gb|ADI81805.1| cell division protein [Heliconius cydno cordula]
Length = 273
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 72/200 (36%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV +
Sbjct: 2 SKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLR 61
Query: 91 ---SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYP 146
SN ++ ++VA+D+ M + GVK + D + E I++ G DLV+ D A
Sbjct: 62 QNTSNTDDVKIVAVDLQAMAALPGVKQIQGDITKNSTAHEIIKEFEGLKADLVVCDGAPD 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G ID L AA +L GG F+ K F+G + LK F V
Sbjct: 122 VTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVS 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 182 KPRSSRNSSIEAFVICQNYK 201
>gi|298400869|gb|ADI81754.1| cell division protein [Heliconius melpomene melpomene]
gi|298400871|gb|ADI81755.1| cell division protein [Heliconius melpomene melpomene]
gi|298400873|gb|ADI81756.1| cell division protein [Heliconius melpomene melpomene]
gi|298400877|gb|ADI81758.1| cell division protein [Heliconius melpomene melpomene]
gi|298400879|gb|ADI81759.1| cell division protein [Heliconius melpomene melpomene]
gi|298400881|gb|ADI81760.1| cell division protein [Heliconius melpomene melpomene]
gi|298400885|gb|ADI81762.1| cell division protein [Heliconius melpomene melpomene]
gi|298400887|gb|ADI81763.1| cell division protein [Heliconius melpomene melpomene]
gi|298400889|gb|ADI81764.1| cell division protein [Heliconius melpomene melpomene]
gi|298400893|gb|ADI81766.1| cell division protein [Heliconius melpomene melpomene]
gi|298400897|gb|ADI81768.1| cell division protein [Heliconius melpomene melpomene]
gi|298400899|gb|ADI81769.1| cell division protein [Heliconius melpomene melpomene]
gi|298400901|gb|ADI81770.1| cell division protein [Heliconius melpomene melpomene]
gi|298400903|gb|ADI81771.1| cell division protein [Heliconius melpomene melpomene]
gi|298400905|gb|ADI81772.1| cell division protein [Heliconius melpomene melpomene]
gi|298400907|gb|ADI81773.1| cell division protein [Heliconius melpomene melpomene]
gi|298400909|gb|ADI81774.1| cell division protein [Heliconius heurippa]
gi|298400911|gb|ADI81775.1| cell division protein [Heliconius heurippa]
gi|298400913|gb|ADI81776.1| cell division protein [Heliconius heurippa]
gi|298400915|gb|ADI81777.1| cell division protein [Heliconius heurippa]
gi|298400917|gb|ADI81778.1| cell division protein [Heliconius heurippa]
gi|298400919|gb|ADI81779.1| cell division protein [Heliconius heurippa]
gi|298400921|gb|ADI81780.1| cell division protein [Heliconius heurippa]
gi|298400923|gb|ADI81781.1| cell division protein [Heliconius heurippa]
gi|298400925|gb|ADI81782.1| cell division protein [Heliconius heurippa]
gi|298400927|gb|ADI81783.1| cell division protein [Heliconius heurippa]
gi|298400929|gb|ADI81784.1| cell division protein [Heliconius heurippa]
gi|298400931|gb|ADI81785.1| cell division protein [Heliconius heurippa]
gi|298400933|gb|ADI81786.1| cell division protein [Heliconius heurippa]
gi|298400935|gb|ADI81787.1| cell division protein [Heliconius heurippa]
gi|298400937|gb|ADI81788.1| cell division protein [Heliconius heurippa]
gi|298400939|gb|ADI81789.1| cell division protein [Heliconius heurippa]
gi|298400941|gb|ADI81790.1| cell division protein [Heliconius heurippa]
gi|298400943|gb|ADI81791.1| cell division protein [Heliconius heurippa]
gi|298400945|gb|ADI81792.1| cell division protein [Heliconius heurippa]
gi|298400947|gb|ADI81793.1| cell division protein [Heliconius heurippa]
gi|298400949|gb|ADI81794.1| cell division protein [Heliconius cydno cordula]
gi|298400951|gb|ADI81795.1| cell division protein [Heliconius cydno cordula]
gi|298400953|gb|ADI81796.1| cell division protein [Heliconius cydno cordula]
gi|298400959|gb|ADI81799.1| cell division protein [Heliconius cydno cordula]
gi|298400963|gb|ADI81801.1| cell division protein [Heliconius cydno cordula]
gi|298400965|gb|ADI81802.1| cell division protein [Heliconius cydno cordula]
gi|298400967|gb|ADI81803.1| cell division protein [Heliconius cydno cordula]
gi|298400973|gb|ADI81806.1| cell division protein [Heliconius cydno cordula]
gi|298400975|gb|ADI81807.1| cell division protein [Heliconius cydno cordula]
gi|298400977|gb|ADI81808.1| cell division protein [Heliconius cydno cordula]
gi|298400979|gb|ADI81809.1| cell division protein [Heliconius cydno cordula]
gi|298400981|gb|ADI81810.1| cell division protein [Heliconius cydno cordula]
gi|298400983|gb|ADI81811.1| cell division protein [Heliconius cydno cordula]
gi|298400985|gb|ADI81812.1| cell division protein [Heliconius cydno cordula]
gi|298400987|gb|ADI81813.1| cell division protein [Heliconius cydno cordula]
Length = 273
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 72/200 (36%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV +
Sbjct: 2 SKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLR 61
Query: 91 ---SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYP 146
SN ++ ++VA+D+ M + GVK + D + + E I++ G DLV+ D A
Sbjct: 62 QNTSNTDDVKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIKEFEGLKADLVVCDGAPD 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G ID L AA +L GG F+ K F+G + LK F V
Sbjct: 122 VTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVS 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 182 KPRSSRNSSIEAFVICQNYK 201
>gi|298400895|gb|ADI81767.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 73/200 (36%), Positives = 108/200 (54%), Gaps = 4/200 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV +
Sbjct: 2 SKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLR 61
Query: 91 ---SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYP 146
SN ++ ++VA+D+ M P+ GVK + D + + E I++ G DLV+ D A
Sbjct: 62 QNTSNTDDVKIVAVDLQAMAPLPGVKQIQGDITKISTAHEIIKEFEGLKADLVVCDGAPD 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G ID L AA +L GG F+ K F+G + LK F V
Sbjct: 122 VTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDFVTVS 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 182 KPRSSRNSSIEAFVICQNYK 201
>gi|186475643|ref|YP_001857113.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia phymatum
STM815]
gi|226703288|sp|B2JFN9|RLME_BURP8 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|184192102|gb|ACC70067.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia phymatum
STM815]
Length = 220
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 116/216 (53%), Gaps = 10/216 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSW
Sbjct: 3 KNKFNTSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSW 62
Query: 82 SQVAARIT---------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
SQ + ++A+D+L MEPI V F + DF + + + + +
Sbjct: 63 SQYVRNKLSQGKHRDAQREGGIDGTIIALDLLPMEPIADVHFIQGDFREDNVLAQLEEVV 122
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G DLV+SDMA G D R +C+ A FA L G LVK F G +
Sbjct: 123 GDRDVDLVISDMAPNLSGVAVADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQ 182
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
I+ K F+ V KP ASR +S E F+L + ++
Sbjct: 183 IVEKFKHQFKTVAARKPKASRDKSSETFILGRHLKR 218
>gi|241667177|ref|ZP_04754755.1| ribosomal RNA large subunit methyltransferase J [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254875729|ref|ZP_05248439.1| ribosomal large subunit methyltransferase J [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254841750|gb|EET20164.1| ribosomal large subunit methyltransferase J [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 206
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 127/207 (61%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S +++ W+ H +D YV +A G+R+R+++K+L+I +K+ + + N IVDLG++PG
Sbjct: 2 SKGSTTKKWIQDHTSDYYVLQANKLGYRSRASFKILEIQDKYNLFKQNMFIVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNPDLV 139
WS+ + G+N +++A+D+L+M PI GV+F + DF +++E + Q D V
Sbjct: 62 WSEQVVKFIGNN---GKLIALDLLEMAPIAGVEFIQGDFSSDETYERLNQLINDKKIDCV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ D R++ L E A FA LN G F+ K FQG +++ L L+++
Sbjct: 119 ISDMAPNLSGNKTSDQARSIYLLELALDFATTNLNRNGSFVAKVFQGQGSDEYLKLVRES 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV KP +SR +S E +++A GF+
Sbjct: 179 FNKVTQFKPKSSRPKSREFYVVATGFK 205
>gi|325524578|gb|EGD02605.1| ribosomal RNA large subunit methyltransferase E [Burkholderia sp.
TJI49]
Length = 220
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IV LG++PGSWSQ A
Sbjct: 7 NQHWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVALGAAPGSWSQYA 66
Query: 86 ARI---------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+ +VA+D+L MEPI V F + DF + + + + G P
Sbjct: 67 RNKLAQGKKRDAVREGGIDGTIVALDMLPMEPIADVHFIQGDFREDEVLHQLEDVLEGRP 126
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K+ F+ V KP ASR +S E F+L + +
Sbjct: 187 FKQQFKVVAPRKPKASRDKSSETFILGRHLK 217
>gi|156084518|ref|XP_001609742.1| ribosomal RNA large subunit methyltransferase J protein [Babesia
bovis T2Bo]
gi|154796994|gb|EDO06174.1| ribosomal RNA large subunit methyltransferase J protein, putative
[Babesia bovis]
Length = 237
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 2/214 (0%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
KV+N + S +W+ R I D Y ++AQ++ +R+R+AYKL ++++++ + + N+ IV
Sbjct: 2 RAFKVRNPATTH-SAEWIRRQITDHYTKKAQVDQYRSRAAYKLQELDDRYLLFRKNQIIV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
+LG PG W+QV + + A+N++V+ ID L M+ I F K D D + + A+
Sbjct: 61 ELGCYPGGWAQVCLERSLTGASNSKVIGIDRLHMDHIANYDFIKGDINDQSTQAQLFSAL 120
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G DLVLSD+A G ++ DHL + LC A ++ + G F+VK F GG N+
Sbjct: 121 QGAKADLVLSDLAPSCTGIKQDDHLNSTELCMQAAALMERIIAVNGSFVVKIFMGGQLNN 180
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L+ F V KP ASR+ES EM+ + KGF
Sbjct: 181 YRTYLQSQFNTVHSAKPQASRSESREMYFVCKGF 214
>gi|225712472|gb|ACO12082.1| ribosomal RNA methyltransferase 1 [Lepeophtheirus salmonis]
Length = 297
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN-RRIVDLGSSPGSWSQ 83
SS+D D Y + A+ EGWRARSA+KL+QIN++ ++ S+ + +VDL ++PGSWSQ
Sbjct: 4 SSKD-----KRDIYYRLAKEEGWRARSAFKLIQINDEFNLINSDVQNVVDLCAAPGSWSQ 58
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSD 142
V A+ + +VA+D+ M PI GV + D L + E I G+ +LV+ D
Sbjct: 59 VLAKKI---TGKSVIVAVDLQAMAPIPGVITLQGDITKLSTAEKIISYFDGSLAELVVCD 115
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A G ID L AA +L GG F+ K F+G + I L+ F
Sbjct: 116 GAPDVTGLHDIDEYIQGHLLLAALNITTHILKPGGSFVAKIFRGKDVSTIYSQLRLFFDS 175
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S E F++ + +
Sbjct: 176 VYVAKPPSSRNSSKESFVVCQNY 198
>gi|298400875|gb|ADI81757.1| cell division protein [Heliconius melpomene melpomene]
Length = 273
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 72/200 (36%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV +
Sbjct: 2 SKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLR 61
Query: 91 ---SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYP 146
SN ++ ++VA+D+ M + GVK + D + + E I++ G DLV+ D A
Sbjct: 62 KNTSNTDDVKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIQEFEGLKADLVVCDGAPD 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G ID L AA +L GG F+ K F+G + LK F V
Sbjct: 122 VTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVS 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 182 KPRSSRNSSIEAFVICQNYK 201
>gi|115351226|ref|YP_773065.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia ambifaria
AMMD]
gi|122323529|sp|Q0BGJ2|RLME_BURCM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|115281214|gb|ABI86731.1| 23S rRNA Um-2552 2'-O-methyltransferase [Burkholderia ambifaria
AMMD]
Length = 220
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 10/212 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
+++WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQNWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGATPGSWSQYA 66
Query: 86 ARITGSNANN---------TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN- 135
++A+D+L MEPI V F + DF + D + + G
Sbjct: 67 RNKLAQGKKRDTQREGGIDGTIIALDLLPMEPIADVHFIQGDFREDDVLRQLEDVLEGRA 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R LC+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHLCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K+ F+ V KP ASR +S E F+L + ++
Sbjct: 187 FKQQFKVVAPRKPKASRDKSSETFILGRQLKQ 218
>gi|156549827|ref|XP_001607570.1| PREDICTED: similar to GA11008-PA, partial [Nasonia vitripennis]
Length = 230
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + SS+ WL+R DPYV++A+ E +R RSA+KLL+IN KH+IL +VD G++PG
Sbjct: 9 KGKKHSSQQWLSRQFKDPYVEKARQENYRCRSAFKLLEINRKHRILSPGLHVVDCGAAPG 68
Query: 80 SWSQVAARITGSNANN-----TRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQAIG 133
SW+QVA ++T S+ +V+AID L + PI G + DF D+ ++ A+G
Sbjct: 69 SWTQVATQLTNSHGKMLGEQVGKVIAIDKLPIHPIEGATVYGNLDFTTEDAQNILKAALG 128
Query: 134 GNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G ++V+SDMA G R +DH + L A FA+E+ G F+VK + G +
Sbjct: 129 GKFVEVVMSDMAPNASGVRDLDHENIIKLAYMAFKFAIEVSCYEGTFIVKVWDGHKCPKL 188
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + F+ V +P A+R ES E F++A+GF+
Sbjct: 189 EEDLARFFRNVKIARPQATRDESSEKFIIARGFK 222
>gi|13386002|ref|NP_080786.1| putative ribosomal RNA methyltransferase 2 [Mus musculus]
gi|81880352|sp|Q9CPY0|RRMJ2_MOUSE RecName: Full=Putative ribosomal RNA methyltransferase 2; AltName:
Full=Protein ftsJ homolog 2; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase
gi|12844585|dbj|BAB26420.1| unnamed protein product [Mus musculus]
gi|12856472|dbj|BAB30680.1| unnamed protein product [Mus musculus]
gi|26346843|dbj|BAC37070.1| unnamed protein product [Mus musculus]
gi|40555804|gb|AAH64776.1| FtsJ homolog 2 (E. coli) [Mus musculus]
gi|74219034|dbj|BAE26662.1| unnamed protein product [Mus musculus]
gi|148687177|gb|EDL19124.1| FtsJ homolog 2 (E. coli) [Mus musculus]
Length = 246
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 83/224 (37%), Positives = 127/224 (56%), Gaps = 8/224 (3%)
Query: 11 RGLTQKV-KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
R L V R G+ WL RH+ DP+V+ A++E +R RSA+KLL++NEKHQIL+
Sbjct: 15 RRLHTAVCHYRGRTGAEHLWLTRHLKDPFVKAAKVESYRCRSAFKLLEMNEKHQILRPGL 74
Query: 70 RIVDLGSSPGSWSQVAARITGSNA-----NNTRVVAIDILDMEPILGVKFFKF-DFLDLD 123
R++D G++PG+WSQVA + + V+ +D+L + P+ G F D D
Sbjct: 75 RVLDCGAAPGAWSQVAVQRVNATGADSSSPVGFVLGVDLLHIFPLAGATFLCPADVTDPR 134
Query: 124 SWEFIRQAIGGNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
+++ I + + V+ SDMA G R +DH + +SLC A+++L+ GG L K
Sbjct: 135 TFQKILELLPSRRADVILSDMAPNATGIRDLDHDKLISLCLTLVDMAVDILHPGGTLLCK 194
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
T+ G ++ + L + FQ VKP ASR ES E++LLA +R
Sbjct: 195 TWAGSKSHLLQKRLTQEFQSTRVVKPEASRKESSEVYLLATQYR 238
>gi|301096605|ref|XP_002897399.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
gi|262107090|gb|EEY65142.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
Length = 302
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y ++A+ +G+RARSA+KLLQ+++K +L R+VDL ++PG WSQV A
Sbjct: 5 SKDKRDIYYRKAKQQGYRARSAFKLLQLDDKFGLLSGATRVVDLCAAPGGWSQVIAERVP 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
++ ++A+D+++M P+ GV K D + + I G +V+SD A +G
Sbjct: 65 ---KDSTIIAVDLMEMAPLDGVVQLKGDITHKATADEIVAQFRGQKAQVVVSDGAPDVLG 121
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L A +L++L GG F+ K F+G + + L++ F KV KP
Sbjct: 122 LHDLDEYLQAQLVLAGLNISLQILEDGGTFVAKLFRGKEVSLLYAQLRRFFSKVTCAKPK 181
Query: 210 ASRAESVEMFLLAKGF 225
SR S E F++ + F
Sbjct: 182 TSRNSSFEAFVVCQDF 197
>gi|126328301|ref|XP_001374289.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 310
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 106/196 (54%), Gaps = 1/196 (0%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KLLQ++E+ Q+ RR VDL ++PGSWSQV +R G
Sbjct: 5 SKDKRDVYYRLAKEEGWRARSAFKLLQLDEEFQLFSGVRRAVDLCAAPGSWSQVLSRKLG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ + +VA+D+ M P+ GV + D + + I G P DLV+ D A G
Sbjct: 65 EDESPACIVAVDLQAMAPLPGVVQIQGDITKASTAQEIIGHFEGQPADLVVCDGAPDVTG 124
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
ID L AA A+ +L GG F+ K F+G + L+ F V+ KP
Sbjct: 125 LHDIDEYIQAQLLLAALNIAIHVLKPGGSFVAKIFRGRDVTLLYSQLRIFFPDVVCAKPR 184
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +GF
Sbjct: 185 SSRNSSIEAFAVCRGF 200
>gi|195450132|ref|XP_002072378.1| GK22358 [Drosophila willistoni]
gi|194168463|gb|EDW83364.1| GK22358 [Drosophila willistoni]
Length = 249
Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 72/214 (33%), Positives = 114/214 (53%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS++WL R ++DPYV++A + +R RSA+KLL+I++K+ ++Q ++D G++PG
Sbjct: 34 KGKSKSSQEWLTRQLSDPYVEKAHMMNYRCRSAFKLLEIDDKYHLMQPGYTVIDCGAAPG 93
Query: 80 SWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKFDFLDLDS--WEFIRQAI 132
SW+QVA T +N + V++ID+L + G +
Sbjct: 94 SWTQVAVERTNANGKQEKKPLGSVISIDLLHFHAVPGAVIYGGMDFTSAVAQQRLKESLA 153
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G + VLSDMA G R +D +LC FAL M + +VK + G +
Sbjct: 154 GRRVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSGPDANLVVKVWDNGDVPKL 213
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +H++KV VKP ASR +S E FL+A+GFR
Sbjct: 214 EKTMLQHYEKVKRVKPRASRGDSAEHFLVARGFR 247
>gi|296193362|ref|XP_002744485.1| PREDICTED: putative ribosomal RNA methyltransferase 2-like
[Callithrix jacchus]
Length = 246
Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 81/219 (36%), Positives = 125/219 (57%), Gaps = 7/219 (3%)
Query: 14 TQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVD 73
T + ++ G+ WL RH+ DP+V+ A++E +R RSA+KLL++NE+HQIL+ R++D
Sbjct: 19 TARSHCKNRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEMNERHQILRPGLRVLD 78
Query: 74 LGSSPGSWSQVAARITGSNANN-----TRVVAIDILDMEPILGVKFFKFDFLDLD--SWE 126
G++PG+WSQVA R + + V+ +D+L + P+ G F + S
Sbjct: 79 CGAAPGAWSQVAVRKVNATGTDLSSPVGFVLGVDLLHILPLEGATFLCPADVTDPRTSQR 138
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
+ GG D++LSDMA G R +DH R +SLC + ++L+ GG FL KT+ G
Sbjct: 139 ILELLPGGRADVILSDMAPNATGVRDLDHDRLISLCLSLLGMTPDILHPGGTFLCKTWAG 198
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ + L + FQ V +KP ASR ES EM+ LA +
Sbjct: 199 SQSRQLQSRLTEEFQSVRIIKPEASRKESSEMYFLATQY 237
>gi|157117994|ref|XP_001658956.1| ribosomal RNA methyltransferase [Aedes aegypti]
gi|108875892|gb|EAT40117.1| ribosomal RNA methyltransferase [Aedes aegypti]
Length = 306
Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 6/202 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KL+ I+E I + R VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIYYRLAKEEGWRARSAFKLIHIDEVFNIFEGVTRAVDLCAAPGSWSQVLSKKLY 64
Query: 91 SN----ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DLVLSDMA 144
N A++ +++A+D+ M P+ GV + D L + I + G LV+ D A
Sbjct: 65 ENRDKEADDVKIIAVDLQAMAPLPGVTQLQGDITKLSTANAIIEQFGNGQKAQLVICDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G ID L AA +L GG F+ K F+G T + L+ F+KV
Sbjct: 125 PDVTGLHDIDEYIQSQLLLAALNITTHVLTEGGTFIAKIFRGKDTTLLYSQLRIFFEKVS 184
Query: 205 HVKPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 185 IAKPASSRNSSIEAFVVCQSYK 206
>gi|117926296|ref|YP_866913.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Magnetococcus sp. MC-1]
gi|143460465|sp|A0LC14|RLME_MAGSM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|117610052|gb|ABK45507.1| 23S rRNA Um-2552 2'-O-methyltransferase [Magnetococcus sp. MC-1]
Length = 214
Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 122/214 (57%), Gaps = 11/214 (5%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ-------ILQSNRRIVD 73
+ SS+ WL H NDPYVQ+A+ EG+R+R+AYKL+++ E + ++ +V+
Sbjct: 3 KQRPSSKRWLREHHNDPYVQQARREGYRSRAAYKLMELQEVVKEDGKSLLLIPVGANVVE 62
Query: 74 LGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-I 132
LG++PG W+QVA ++ G + VV ID+L M+P+ G + DFLD ++
Sbjct: 63 LGAAPGGWTQVAVKLAGVEGS---VVGIDLLAMDPVPGAEILVGDFLDDAMLAQLQGLLH 119
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G D+VLSDMA G + D LR +L EAA F E L GG+F VK F G +D+
Sbjct: 120 EGRVDVVLSDMAPNMCGVKSADQLRGEALAEAAFQFVEENLKTGGNFAVKLFNGPGFHDM 179
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ + F V VKP +SR+ S E +L+ GF+
Sbjct: 180 VKQARAMFTVVKVVKPDSSRSRSPEHYLVGMGFK 213
>gi|157128998|ref|XP_001655238.1| cell division protein ftsj [Aedes aegypti]
gi|108872397|gb|EAT36622.1| cell division protein ftsj [Aedes aegypti]
Length = 239
Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 78/227 (34%), Positives = 125/227 (55%), Gaps = 7/227 (3%)
Query: 6 GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
SS G + SS+ WL+R +NDPYV++A++ +R RSA+KLL+I++K+ I+
Sbjct: 8 SSSLALGKVVPTNLKGKSKSSQQWLSRQLNDPYVEKAKMLNYRCRSAFKLLEIDQKYNII 67
Query: 66 QSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFF-KFDF 119
+ ++D G+SPGSWSQ+A + + V+ +D+L + PI DF
Sbjct: 68 KPGHTVIDCGASPGSWSQIAVQQSNASGSQPGKPRGMVIGVDLLQIYPIEHATMLGNTDF 127
Query: 120 LDLDSWEFIRQ-AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
+ +S + IR D VLSDMA G R +D ++LC + FA+ M +
Sbjct: 128 MKQESQDKIRALLGERRVDCVLSDMAPNATGVRSLDQENIITLCYSVLRFAILMSSPNAS 187
Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
LVK + G + ++K++Q+V +KP ASR++S E F+LA+GF
Sbjct: 188 LLVKVWDNGEVPLLEKNMQKYYQQVKRIKPRASRSDSAENFILARGF 234
>gi|148702026|gb|EDL33973.1| Ftsj homolog 1 (E. coli), isoform CRA_b [Mus musculus]
Length = 344
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ + +R VDL ++PGSWSQV ++ G
Sbjct: 27 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVG 86
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ +VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 87 -GQGSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 145
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L +GG F+ K F+G + L+ F V+ KP
Sbjct: 146 LHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPK 205
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 206 SSRNSSIEAFAVCQGY 221
>gi|123229058|emb|CAM17935.1| Ftsj homolog 1 (E. coli) [Mus musculus]
Length = 308
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ + +R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ +VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L +GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPK 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|22028410|gb|AAH34880.1| FtsJ homolog 1 (E. coli) [Mus musculus]
gi|123229060|emb|CAM17937.1| Ftsj homolog 1 (E. coli) [Mus musculus]
Length = 322
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ + +R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ +VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L +GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPK 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|46877062|ref|NP_598752.2| Ftsj homolog [Mus musculus]
gi|26331300|dbj|BAC29380.1| unnamed protein product [Mus musculus]
gi|123229059|emb|CAM17936.1| Ftsj homolog 1 (E. coli) [Mus musculus]
Length = 324
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 108/196 (55%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ + +R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ +VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L +GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPK 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|309782468|ref|ZP_07677192.1| ribosomal RNA large subunit methyltransferase J [Ralstonia sp.
5_7_47FAA]
gi|308918805|gb|EFP64478.1| ribosomal RNA large subunit methyltransferase J [Ralstonia sp.
5_7_47FAA]
Length = 221
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 85/216 (39%), Positives = 120/216 (55%), Gaps = 11/216 (5%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSW
Sbjct: 3 KNKFNQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDEQDKLIKPGQVIVDLGAAPGSW 62
Query: 82 SQVAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
SQ + +VAIDIL ME I V F + DF + D + + + +
Sbjct: 63 SQYVRNKLAASPRAKDGRIDGAIVAIDILPMEAIADVTFIQGDFREDDVFRQLEEIVLEA 122
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
GG DLVLSDMA G D R + E A FA+ L G L+K F G +
Sbjct: 123 TGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFAMAHLKPEGALLIKCFHGSGYS 182
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I+ + K+HF+ V KP ASR +S E FLL + +
Sbjct: 183 QIVEMFKRHFKIVAPRKPKASRDKSSETFLLGRQLK 218
>gi|30248542|ref|NP_840612.1| FtsJ cell division protein [Nitrosomonas europaea ATCC 19718]
gi|81436182|sp|Q820A2|RLME_NITEU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|30138428|emb|CAD84438.1| FtsJ cell division protein [Nitrosomonas europaea ATCC 19718]
Length = 206
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 116/204 (56%), Gaps = 4/204 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+SR W+ HIND +V++A EG+R+R+AYKL +I E + +VDLG+ PGS
Sbjct: 2 KSARTSRAWIKAHINDNFVRKANHEGYRSRAAYKLREIAEHDALFVPGMTVVDLGAVPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
WSQVA G +V A+D+LDM+P+ G+ F + DF + + + A+GG DLV
Sbjct: 62 WSQVALESVGPT---GKVFALDMLDMQPLPGMTFIQGDFRENEVLAMLEAALGGKRADLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDM+ G R D + M L E A F E LN G +FLVK FQG +++
Sbjct: 119 ISDMSPNLTGIRVSDQAQGMYLAELALIFCREHLNPGKNFLVKVFQGSDFEAFRQMMQTD 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAK 223
F KV+ KP ASR S E++LL
Sbjct: 179 FSKVVIRKPKASRDRSKELYLLGL 202
>gi|156392658|ref|XP_001636165.1| predicted protein [Nematostella vectensis]
gi|156223265|gb|EDO44102.1| predicted protein [Nematostella vectensis]
Length = 210
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 119/210 (56%), Gaps = 4/210 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL RH+ DPYV++A + +R RSAYKL+Q+++K+ L ++D G+SPGSW
Sbjct: 1 RNDSSTRWLRRHLADPYVKKASEDNYRCRSAYKLIQLDDKYHFLLPGHVVIDCGASPGSW 60
Query: 82 SQVAARIT--GSNANNTRVVAIDILDMEPILG-VKFFKFDFLDLDSWEFIRQAIGGN-PD 137
+QVA VVAID+LD++ I G V + DF + I + +
Sbjct: 61 TQVAVERVIPNIGGEQGLVVAIDLLDIKAIPGAVIMGRCDFTHKATQTKILSLLPSFGVN 120
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
++LSDMA + G+ +DH + LC++A F + L GG FL K + G T D + +LK
Sbjct: 121 VILSDMAPNSSGNHSLDHEAILDLCDSAFEFGQKTLRPGGVFLCKLWDGRGTVDFMQMLK 180
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F+ V KP ASR +S E+++ A GF K
Sbjct: 181 RSFKLVKKCKPQASRKDSPEIYIYAAGFIK 210
>gi|187929109|ref|YP_001899596.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ralstonia pickettii 12J]
gi|226705302|sp|B2UGQ0|RLME_RALPJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|187725999|gb|ACD27164.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ralstonia pickettii 12J]
Length = 221
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 120/216 (55%), Gaps = 11/216 (5%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSW
Sbjct: 3 KNKFNQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDEQDKLIKPGQVIVDLGAAPGSW 62
Query: 82 SQVAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
SQ + +VAIDIL ME I V F + DF + + + + + +
Sbjct: 63 SQYVRNKLAASPRAKDGRIDGAIVAIDILPMEAIADVTFIQGDFREDEVFRQLEEIVLEV 122
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
GG DLVLSDMA G D R + E A FA+ L G L+K F G +
Sbjct: 123 SGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFAMAHLKPEGALLIKCFHGSGYS 182
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I+ + K+HF+ V KP ASR +S E FLL + +
Sbjct: 183 QIVEMFKRHFKIVAPRKPKASRDKSSETFLLGRQLK 218
>gi|161525194|ref|YP_001580206.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia multivorans
ATCC 17616]
gi|189350067|ref|YP_001945695.1| cell division protein methyltransferase [Burkholderia multivorans
ATCC 17616]
gi|226703287|sp|A9ACL8|RLME_BURM1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|160342623|gb|ABX15709.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia multivorans
ATCC 17616]
gi|189334089|dbj|BAG43159.1| cell division protein methyltransferase [Burkholderia multivorans
ATCC 17616]
Length = 220
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQHWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARI---------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+ +VA+D+L MEPI V F + DF + + + + G
Sbjct: 67 RNKLAQGKKRDAVREGGIDGTIVALDMLPMEPIADVHFIQGDFREDEVLHQLEAVLEGRT 126
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K+ F+ V KP ASR +S E F+L + +
Sbjct: 187 FKQQFKVVAPRKPKASRDKSSETFILGRHLK 217
>gi|207723995|ref|YP_002254393.1| ribosomal rna large subunit methyltransferase j (cell division
protein ftsj) [Ralstonia solanacearum MolK2]
gi|207742905|ref|YP_002259297.1| ribosomal rna large subunit methyltransferase j (cell division
protein ftsj) [Ralstonia solanacearum IPO1609]
gi|206589203|emb|CAQ36165.1| ribosomal rna large subunit methyltransferase j (cell division
protein ftsj) [Ralstonia solanacearum MolK2]
gi|206594300|emb|CAQ61227.1| ribosomal rna large subunit methyltransferase j (cell division
protein ftsj) [Ralstonia solanacearum IPO1609]
Length = 230
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 125/229 (54%), Gaps = 15/229 (6%)
Query: 9 SRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN 68
RRG KN+ ++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++
Sbjct: 3 RRRGANSMAKNKF----NQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDEQDKLIKPG 58
Query: 69 RRIVDLGSSPGSWSQVAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDL 122
+ IVDLG++PGSWSQ + +VAIDIL MEP+ V F + DF +
Sbjct: 59 QVIVDLGAAPGSWSQYVRNKLAASPRAKDGRIDGAIVAIDILPMEPVADVAFIQGDFREE 118
Query: 123 DSWEFIRQAI-----GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
++ + + GG DLVLSDMA G D R + E A FA L G
Sbjct: 119 AVFQQLEAIVLDATGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFAQAHLKPEG 178
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+K F G + I+ + K+HF+ V KP ASR +S E FLL + +
Sbjct: 179 ALLIKCFHGSGYSQIVEMFKRHFRVVAPRKPKASRDKSSETFLLGRQLK 227
>gi|167587473|ref|ZP_02379861.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia ubonensis
Bu]
Length = 220
Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 10/211 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQHWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARI---------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+ +VA+D+L MEPI V F + DF + + + + G P
Sbjct: 67 RNKLAQGKKRDAVREGGIDGTIVALDMLPMEPIADVHFIQGDFREDEVLHQLEAVLEGRP 126
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A F+ L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHVCDLALEFSQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K+ F+ V KP ASR +S E F+L + +
Sbjct: 187 FKQQFKIVAPRKPKASRDKSSETFILGRHLK 217
>gi|150950985|ref|XP_001387267.2| tRNA methyltransferase [Scheffersomyces stipitis CBS 6054]
gi|149388260|gb|EAZ63244.2| tRNA methyltransferase [Pichia stipitis CBS 6054]
Length = 301
Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 76/205 (37%), Positives = 110/205 (53%), Gaps = 8/205 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y +RA+ +GWRARSA+KLLQ++++ QIL +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRRAKEQGWRARSAFKLLQLHDEFQILHGLKRVVDLCAAPGSWSQ 57
Query: 84 VAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
V +R N + ++VA+D+ M PI GV + D + I GG P D V
Sbjct: 58 VLSRELYQKQNQPDAKIVAVDLQPMTPIDGVTCIQADITHPKTLHKILDIFGGEPADFVC 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G +D L +A +L GG F+ K F+G + + L F
Sbjct: 118 SDGAPDVTGLHDLDEYIQAQLILSALQLTTCILKPGGTFVAKIFRGRDIDLLYSQLSYLF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+KVI KP +SR S+E F++ G+
Sbjct: 178 EKVICAKPRSSRGTSLEAFIVCIGY 202
>gi|170697951|ref|ZP_02889034.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia ambifaria
IOP40-10]
gi|170137117|gb|EDT05362.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia ambifaria
IOP40-10]
Length = 220
Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 10/212 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQHWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGATPGSWSQYA 66
Query: 86 ARITGSNANN---------TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN- 135
++A+D+L MEPI V F + DF + D + + + G
Sbjct: 67 RNKLAQGKKRDTQREGGIDGTIIALDLLPMEPIADVHFIQGDFREDDVLRQLEEVLEGRA 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R LC+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHLCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K+ F+ V KP ASR +S E F+L + ++
Sbjct: 187 FKQQFKVVAPRKPKASRDKSSETFILGRQLKQ 218
>gi|62263595|gb|AAX78175.1| unknown protein [synthetic construct]
Length = 241
Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 129/207 (62%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S S++ WL+ H +D YV +A G+R+R+++K+L+I +K+Q+ + N +VDLG++PG
Sbjct: 28 SKGSSTKKWLHEHTSDYYVIQANKLGYRSRASFKILEIQDKYQLFKPNMFVVDLGAAPGG 87
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WS+ + G N +++A+D+L+M PI GV+F + DF ++++ + + D V
Sbjct: 88 WSEQVIKYIGKN---GKLIALDLLEMAPIAGVEFIQGDFSSDETYQKLNTLVNNQKIDCV 144
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ D +++ L E A FA LN G F+ K FQG +++ L L+++
Sbjct: 145 ISDMAPNLSGNKTSDQAKSIYLLELALDFANTNLNKNGSFVAKVFQGQGSDEYLKLVRES 204
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KVI KP +SRA+S E +++A F+
Sbjct: 205 FNKVIQFKPKSSRAKSREFYVIATEFK 231
>gi|303275988|ref|XP_003057288.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461640|gb|EEH58933.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 343
Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KLLQI++ + + + +VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRKAKEEGWRARSAFKLLQIDDSFDVFKDVKHVVDLCAAPGSWSQ 57
Query: 84 VAARITG--------SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN 135
V +R + + ++VAID+ M PI GV + D L + G
Sbjct: 58 VISRRLWIPARDAGTAAEDMPKIVAIDLQPMAPIEGVVQIQGDITSLAKVNEVLTHFEGK 117
Query: 136 -PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
DL++SD A G +D L A +L GG ++ K F+G +
Sbjct: 118 LADLIVSDGAPDVTGLHDMDEFMQAQLILAGLAVCAHILRPGGTYIAKVFRGKDVALLYA 177
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LK F +V KP +SR SVE F++ + FR
Sbjct: 178 QLKMFFTQVTCAKPKSSRNSSVEAFVVCQDFR 209
>gi|299066492|emb|CBJ37682.1| 23S rRNA methyltransferase [Ralstonia solanacearum CMR15]
Length = 221
Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 119/216 (55%), Gaps = 11/216 (5%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSW
Sbjct: 3 KNKFNQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDEQDKLIKPGQVIVDLGAAPGSW 62
Query: 82 SQVAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
SQ + +VAIDIL MEP+ V F + DF + ++ + +
Sbjct: 63 SQYVRNKLAASPRAKDGRIDGAIVAIDILPMEPVADVTFIQGDFREESVFQELEAIVLDA 122
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
GG DLVLSDMA G D R + E A FA L G L+K F G +
Sbjct: 123 TGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFAQAHLKPEGALLIKCFHGSGYS 182
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I+ + K+HF+ V KP ASR +S E FLL + +
Sbjct: 183 QIVEMFKRHFRVVAPRKPKASRDKSSETFLLGRQLK 218
>gi|83747764|ref|ZP_00944798.1| 23S rRNA Um2552 2'-O-methyltransferase [Ralstonia solanacearum
UW551]
gi|83725536|gb|EAP72680.1| 23S rRNA Um2552 2'-O-methyltransferase [Ralstonia solanacearum
UW551]
Length = 279
Score = 171 bits (432), Expect = 9e-41, Method: Composition-based stats.
Identities = 92/237 (38%), Positives = 129/237 (54%), Gaps = 17/237 (7%)
Query: 3 KPPGSS--SRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
KP S+ RRG KN+ ++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E
Sbjct: 44 KPAASAMFRRRGANSMAKNKF----NQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDE 99
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAAR------ITGSNANNTRVVAIDILDMEPILGVKF 114
+ ++++ + IVDLG++PGSWSQ + +VAIDIL MEP+ V F
Sbjct: 100 QDKLIKPGQVIVDLGAAPGSWSQYVRNKLAASPRAKDGRIDGAIVAIDILPMEPVADVAF 159
Query: 115 FKFDFLDLDSWEFIRQAI-----GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
+ DF + ++ + + GG DLVLSDMA G D R + E A FA
Sbjct: 160 IQGDFREEAVFQQLEAIVLDATGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFA 219
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L G L+K F G + I+ + K+HF+ V KP ASR +S E FLL + +
Sbjct: 220 QAHLKPEGALLIKCFHGSGYSQIVEMFKRHFRVVAPRKPKASRDKSSETFLLGRQLK 276
>gi|307109488|gb|EFN57726.1| hypothetical protein CHLNCDRAFT_142970 [Chlorella variabilis]
Length = 325
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 66/204 (32%), Positives = 99/204 (48%), Gaps = 9/204 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KLLQI++ I R +VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDDAFHIFAGVRHVVDLCAAPGSWSQVLSRRLY 64
Query: 90 -------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
+ ++VA+D+ M PI GV + D + + G+ DLV+
Sbjct: 65 LPAVAAGRTGEQLPKIVAVDLQPMAPIEGVTQLQGDITSEATARQVISHFHGHHADLVVC 124
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA +L GG + K F+G + LK F
Sbjct: 125 DGAPDVTGLHDMDEFVQGQLILAALAIVAHVLVPGGTLVAKVFRGRDIALLYSQLKIFFP 184
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F++ + +
Sbjct: 185 DVTVAKPKSSRNSSIEAFVVCRRY 208
>gi|17546244|ref|NP_519646.1| ribosomal RNA large subunit methyltransferase J [Ralstonia
solanacearum GMI1000]
gi|81505141|sp|Q8XZ79|RLME_RALSO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|17428541|emb|CAD15227.1| probable ribosomal rna large subunit methyltransferase j (cell
division protein ftsj) [Ralstonia solanacearum GMI1000]
Length = 221
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 119/216 (55%), Gaps = 11/216 (5%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSW
Sbjct: 3 KNKFNQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDEQDKLIKPGQVIVDLGAAPGSW 62
Query: 82 SQVAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
SQ + +VAIDIL MEP+ V F + DF + ++ + +
Sbjct: 63 SQYVRNKLAASPRAKDGRIDGAIVAIDILPMEPVADVTFIQGDFREESVFQQLETIVLDA 122
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
GG DLVLSDMA G D R + E A FA L G L+K F G +
Sbjct: 123 TGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFAQAHLKPEGALLIKCFHGSGYS 182
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I+ + K+HF+ V KP ASR +S E FLL + +
Sbjct: 183 QIVEMFKRHFRVVAPRKPKASRDKSSETFLLGRQLK 218
>gi|90652009|gb|AAI14565.1| FTSJ2 protein [Homo sapiens]
Length = 240
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 7/229 (3%)
Query: 4 PPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
+ T + ++ G+ WL RH+ DP+V+ A++E +R RSA+KLL++NE+HQ
Sbjct: 3 NTNGGRQGFHTVGSRCKNRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEVNERHQ 62
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKF- 117
IL+ R++D G++PG+WSQVA + ++ V+ +D+L + P+ G F
Sbjct: 63 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPA 122
Query: 118 DFLDLDSWEFIRQAIGGNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
D D + + I + + G V+ SDMA G R +DH R +SLC ++L G
Sbjct: 123 DVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG 182
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G FL KT+ G + + L + FQ V +KP ASR ES E++ LA +
Sbjct: 183 GTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKESSEVYFLATQY 231
>gi|319944197|ref|ZP_08018473.1| ribosomal RNA large subunit methyltransferase J [Lautropia
mirabilis ATCC 51599]
gi|319742492|gb|EFV94903.1| ribosomal RNA large subunit methyltransferase J [Lautropia
mirabilis ATCC 51599]
Length = 239
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 82/230 (35%), Positives = 117/230 (50%), Gaps = 20/230 (8%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+++ + +R WL+ H+NDPYV+ AQ +RAR+A+KL+ I+E+ +++ +VDLGS
Sbjct: 1 MQSSRSKKVNRAWLHDHLNDPYVKLAQRHHYRARAAFKLIGIDEQDHLIRPGMTVVDLGS 60
Query: 77 SPGSWSQVAARIT-------------------GSNANNTRVVAIDILDMEPILGVKFFKF 117
+PGSWSQV R R+VA+D+L MEPI V + +
Sbjct: 61 APGSWSQVVRRRLAAPNLAEDVRKADDLRGEAPQVPIQGRIVALDLLPMEPIPDVNYLQG 120
Query: 118 DFLDLDSWEFIRQ-AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DF + D + + GG DLVLSDMA G D R L E + FA L
Sbjct: 121 DFREQDVLDRLEALLDGGKVDLVLSDMAPNLSGVGVADTARMQDLAELSVDFASRWLKPD 180
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G L+K F G + ++ L K HF V KP ASR S E +LL + +
Sbjct: 181 GALLIKVFHGSGYSQLVRLFKDHFAVVQPRKPKASRDRSAETYLLGRRLK 230
>gi|47214710|emb|CAG01063.1| unnamed protein product [Tetraodon nigroviridis]
Length = 297
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 70/204 (34%), Positives = 106/204 (51%), Gaps = 8/204 (3%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ EGWRARSA+KLLQ++++ + R+VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDIYYRLAKEEGWRARSAFKLLQLDQEFDLFTGVTRVVDLCAAPGSWSQV 58
Query: 85 AARITGSN--ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
+R + A ++VA+D+ M P+ GV + D + + + I + G P DLV+
Sbjct: 59 LSRKLRQDERAEEAKIVAVDLQAMAPLPGVTQIQGDITKVTTAQEIIRHFEGQPADLVVC 118
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA +L GG F+ K F+G + LK F
Sbjct: 119 DGAPDVTGLHDVDEYIQAQLLLAALNITTHVLKPGGTFVAKIFRGKDVTLLYSQLKIFFT 178
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F++ + +
Sbjct: 179 GVTCAKPRSSRNSSIEAFVVCQNY 202
>gi|307730492|ref|YP_003907716.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp.
CCGE1003]
gi|307585027|gb|ADN58425.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp.
CCGE1003]
Length = 220
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 117/216 (54%), Gaps = 10/216 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLGSSPGSW
Sbjct: 3 KNKFNTAWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGSSPGSW 62
Query: 82 SQVAARITGS---------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
SQ A + ++A+DIL MEP+ V F + DF + + + +
Sbjct: 63 SQYARNKLAKGAQRDAEREGGIDGTIIALDILPMEPVADVHFIQGDFREDSVLSQLEEIV 122
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G DLV+SDMA G D R LC+ A F+ L G LVK F G +
Sbjct: 123 GERQVDLVISDMAPNLSGVAVADAARIEHLCDLALEFSQNHLKPDGALLVKCFHGSGYSQ 182
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
I+ K+ F+ V KP ASR +S E F+L K +K
Sbjct: 183 IVEKFKRQFKVVAARKPKASRDKSSETFILGKHLKK 218
>gi|172060240|ref|YP_001807892.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia ambifaria
MC40-6]
gi|226703284|sp|B1YMW2|RLME_BURA4 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|171992757|gb|ACB63676.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia ambifaria
MC40-6]
Length = 220
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 10/212 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQHWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGATPGSWSQYA 66
Query: 86 ARITGSNANN---------TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN- 135
++A+D+L MEPI V F + DF + D + + G
Sbjct: 67 RNKLAQGKKRDTQREGGIDGTIIALDLLPMEPIADVHFIQGDFREDDVLRQLEDVLEGRA 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R LC+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHLCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K+ F+ V KP ASR +S E F+L + ++
Sbjct: 187 FKQQFKVVAPRKPKASRDKSSETFILGRQLKQ 218
>gi|221201968|ref|ZP_03575004.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
multivorans CGD2M]
gi|221204902|ref|ZP_03577919.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
multivorans CGD2]
gi|221213879|ref|ZP_03586852.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
multivorans CGD1]
gi|221166056|gb|EED98529.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
multivorans CGD1]
gi|221175759|gb|EEE08189.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
multivorans CGD2]
gi|221178051|gb|EEE10462.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
multivorans CGD2M]
Length = 220
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQHWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARI---------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+ +VA+D+L MEPI V F + DF + + + + G
Sbjct: 67 RNKLAQGKKRDTVREGGIDGTIVALDMLPMEPIADVHFIQGDFREDEVLHRLEAVLEGRT 126
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K+ F+ V KP ASR +S E F+L + +
Sbjct: 187 FKQQFKVVAPRKPKASRDKSSETFILGRHLK 217
>gi|134295359|ref|YP_001119094.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia
vietnamiensis G4]
gi|189040696|sp|A4JDA6|RLME_BURVG RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|134138516|gb|ABO54259.1| 23S rRNA Um-2552 2'-O-methyltransferase [Burkholderia vietnamiensis
G4]
Length = 220
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 10/211 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQHWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARIT---------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+ ++A+D+L MEPI V F + DF + D + + G P
Sbjct: 67 RNKLAQGKQRDAQREGGIDGTIIALDLLPMEPIADVHFLQGDFREDDVLHQLEGVLEGRP 126
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHICDLALEFAQNHLKPEGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K+ F+ V KP ASR +S E F+L + +
Sbjct: 187 FKQQFKVVAPRKPKASRDKSSETFILGRQLK 217
>gi|323526825|ref|YP_004228978.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp.
CCGE1001]
gi|323383827|gb|ADX55918.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp.
CCGE1001]
Length = 220
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 83/216 (38%), Positives = 117/216 (54%), Gaps = 10/216 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLGSSPGSW
Sbjct: 3 KNKFNTAWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGSSPGSW 62
Query: 82 SQVAARITGS---------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
SQ A + ++A+DIL M+P+ V F + DF + + + +
Sbjct: 63 SQYARNKLAKGAQRDAEREGGIDGTIIALDILPMDPVADVHFIQGDFREDSVLVQLEELV 122
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G DLV+SDMA G D R LC+ A F+ L G LVK F G +
Sbjct: 123 GERQVDLVISDMAPNLSGVAVADAARIEHLCDLALEFSQNHLKPDGALLVKCFHGSGYSQ 182
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
I+ K+ F+ V KP ASR +S E F+L K +K
Sbjct: 183 IVEKFKRQFKVVAARKPKASRDKSSETFILGKHLKK 218
>gi|148244491|ref|YP_001219185.1| cell division protein methyltransferase FtsJ [Candidatus
Vesicomyosocius okutanii HA]
gi|158514271|sp|A5CX75|RLME_VESOH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|146326318|dbj|BAF61461.1| cell division protein methyltransferase FtsJ [Candidatus
Vesicomyosocius okutanii HA]
Length = 210
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 122/207 (58%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S + SSR W+ HIND +V+ A+ G+R+R+ YKL+++ K + ++ +++DLG++PGS
Sbjct: 2 SKKDSSRRWMREHINDKFVKNAKKAGYRSRAVYKLIEVINKEKFIKPGNKVIDLGAAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLV 139
WSQ+A + G + +V+A DIL+++PI G+ F + DF + +E + + ++V
Sbjct: 62 WSQMAIKAVG---KSGQVIANDILNIKPIDGIDFLQGDFTENSVYEALLNLTMNQKVNVV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSD+A G +D ++M LCE A A++ L G F VK FQG + + + +
Sbjct: 119 LSDIAPNISGQPSVDIPKSMYLCELALDIAIKSLTPSGYFFVKVFQGDGFDMFVESCRTY 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR S E++LLA +
Sbjct: 179 FSYVTIHKPKASRTRSKEVYLLANKLK 205
>gi|330816267|ref|YP_004359972.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia gladioli
BSR3]
gi|327368660|gb|AEA60016.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia gladioli
BSR3]
Length = 220
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 116/211 (54%), Gaps = 10/211 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+++ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDDQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARIT---------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN- 135
+ ++A+D+L MEPI V F + DF + + + + G
Sbjct: 67 RNKLAQGKQRDSQREGGIDGIIIALDMLPMEPIADVHFIQGDFREDEVLRQLEDVLEGRA 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A F+ L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVALADAARIEHVCDLALEFSQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F+ V KP ASR +S E F+L + +
Sbjct: 187 FKHQFRTVAPRKPKASRDKSSETFILGRHLK 217
>gi|290560982|gb|ADD37893.1| ribosomal RNA methyltransferase 1 [Lepeophtheirus salmonis]
Length = 297
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN-RRIVDLGSSPGSWSQ 83
SS+D D Y + A+ EGWRARSA+KL+QIN++ ++ S+ + +VDL ++PGSWSQ
Sbjct: 4 SSKD-----KRDIYYRLAKEEGWRARSAFKLIQINDEFNLINSDVQNVVDLCAAPGSWSQ 58
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSD 142
V A+ + +VA+D+ M PI GV + D L + E I G+ +LV+ D
Sbjct: 59 VLAKKI---TGKSVIVAVDLQAMAPIPGVITLQGDITKLSTAEKIISYFDGSLAELVVCD 115
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A G ID L AA +L GG F+ K F+G + I L+ F
Sbjct: 116 GAPDATGLHDIDEYIQGHLLLAALNITTHILKPGGSFVAKIFRGKDVSTIYSQLRLFFDS 175
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S E F++ + +
Sbjct: 176 VFVAKPPSSRNSSKESFVVCQNY 198
>gi|241663317|ref|YP_002981677.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ralstonia pickettii 12D]
gi|240865344|gb|ACS63005.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ralstonia pickettii 12D]
Length = 221
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 85/216 (39%), Positives = 120/216 (55%), Gaps = 11/216 (5%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSW
Sbjct: 3 KNKFNQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDEQDKLIKPGQVIVDLGAAPGSW 62
Query: 82 SQVAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
SQ + +VAIDIL ME I V F + DF + D + + + +
Sbjct: 63 SQYVRNKLAASPRAKDGRIDGAIVAIDILPMEAIADVTFIQGDFREDDVFRQLEEIVLEA 122
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
GG DLVLSDMA G D R + E A FA+ L G L+K F G +
Sbjct: 123 TGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFAMAHLKPEGALLIKCFHGSGYS 182
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I+ + K+HF+ V KP ASR +S E FLL + +
Sbjct: 183 QIVEMFKRHFRIVAPRKPKASRDKSSETFLLGRQLK 218
>gi|189239587|ref|XP_975693.2| PREDICTED: similar to Putative ribosomal RNA methyltransferase 1
(rRNA (uridine-2-O-)-methyltransferase) [Tribolium
castaneum]
Length = 360
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 2/197 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
+R D + ++A+ +GWRARSA+KLLQI+EK IL+ + VDL ++PGSWSQV ++ T
Sbjct: 5 SRDRRDIFYRKAKEQGWRARSAFKLLQIDEKFNILEGVTKAVDLCAAPGSWSQVLSQ-TP 63
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ ++VA+D+ M P+ GV + D + + E I G+ DLV+ D A G
Sbjct: 64 QKNKDVKIVAVDLQPMSPLPGVIQLQGDITEYKTAEAIISHFEGDHADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
ID L A +L GG F+ K F+ + + L F+ VI VKP
Sbjct: 124 LHCIDIYIQAQLLLGALHITCNVLKPGGTFVAKIFRAKDCDLLTQQLLMLFEDVITVKPT 183
Query: 210 ASRAESVEMFLLAKGFR 226
+SR S+E F++ + F+
Sbjct: 184 SSRNSSIEAFVVCRKFK 200
>gi|221111714|ref|XP_002156663.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 299
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 105/205 (51%), Gaps = 9/205 (4%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ GWRARSA+KLLQINE+ + + R+VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDVYYRLAKEGGWRARSAFKLLQINEEFDLFTNVNRVVDLCAAPGSWSQV 58
Query: 85 AARIT---GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+R N ++VA+D+ M P+ GV + D + + I G P DLV+
Sbjct: 59 LSRKLIEERDQKNAVKIVAVDLQAMAPLPGVIQIQGDITKVSTANEIISHFEGEPADLVV 118
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G ID L AA +L IGG+F+ K F+G N + +K F
Sbjct: 119 CDGAPDVTGLHDIDEYIQGQLLLAAFNITSHVLKIGGNFVAKIFRGKDVNLLYSQMKLFF 178
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F++ +
Sbjct: 179 TDVTVCKPRSSRNSSIEAFIVCLNY 203
>gi|254496115|ref|ZP_05109014.1| ribosomal RNA large subunit methyltransferase J [Legionella
drancourtii LLAP12]
gi|254354656|gb|EET13292.1| ribosomal RNA large subunit methyltransferase J [Legionella
drancourtii LLAP12]
Length = 196
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 111/197 (56%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ H +D YV++AQ EG+R+R+ YKL +++EK +L+ +VDLG++PG W+Q +
Sbjct: 1 MQEHFDDVYVKKAQAEGYRSRAVYKLKEVDEKESLLKPGMTVVDLGAAPGGWTQYVSERM 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTI 148
++A+DIL M+ + V DF + + + + I DL+LSDMA
Sbjct: 61 ---QGRGHIIALDILPMDSLPDVDVILGDFREDEVLQKLMNLIPERSVDLLLSDMAPNMS 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G ID R M L E A FA +ML GG L+K F G ++++ K F +V+ KP
Sbjct: 118 GTTAIDIPRAMYLVELAFDFAEKMLKPGGSMLIKVFHGSGFDELVKQAKASFDRVVIRKP 177
Query: 209 VASRAESVEMFLLAKGF 225
ASRA S E +LLAKG+
Sbjct: 178 SASRARSKETYLLAKGY 194
>gi|156547729|ref|XP_001605414.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
Length = 311
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y +RA+ EGWRARSA+KLLQI+++ I + VDL ++PGSWSQV ++ T
Sbjct: 5 SKDKRDIYYRRAKEEGWRARSAFKLLQIDDEFNIFNGVTKAVDLCAAPGSWSQVLSQ-TS 63
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
++ +++A+D+ M PI GV + D ++ + E I G DLV+ D A G
Sbjct: 64 TDVVAPKIIAVDLQAMAPIEGVVQIQGDITNVTTAEQIIAHFGNEHADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA ++L G F+ K F+ + + LK F V KP
Sbjct: 124 LHDMDIYIQSQLLLAALKITTQILKPKGTFVAKIFRAKDASLLYSQLKIFFTSVTCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S E F++ K F
Sbjct: 184 SSRNSSFEAFVVCKDF 199
>gi|258617564|gb|ACV83779.1| cell division-like protein [Heliconius melpomene]
Length = 292
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 72/200 (36%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV +
Sbjct: 5 SKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLR 64
Query: 91 ---SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYP 146
SN ++ ++VA+D+ M + GVK + D + + E I++ G DLV+ D A
Sbjct: 65 QNTSNTDDVKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIKEFEGLKADLVVCDGAPD 124
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G ID L AA +L GG F+ K F+G + LK F V
Sbjct: 125 VTGLHDIDEYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVS 184
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 185 KPRSSRNSSIEAFVICQNYK 204
>gi|300691218|ref|YP_003752213.1| 23S rRNA methyltransferase [Ralstonia solanacearum PSI07]
gi|299078278|emb|CBJ50926.1| 23S rRNA methyltransferase [Ralstonia solanacearum PSI07]
Length = 221
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 85/216 (39%), Positives = 121/216 (56%), Gaps = 11/216 (5%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSW
Sbjct: 3 KNKFNQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDEQDKLIKPGQVIVDLGAAPGSW 62
Query: 82 SQVAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
SQ + +VAIDIL MEP+ V F + DF + ++ + + +
Sbjct: 63 SQYVRNKLADSPRAKDGRIDGAIVAIDILPMEPVSDVTFIQGDFREEAVYQQLEKIVLDT 122
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
GG DLVLSDMA G D R + E A FAL L G L+K F G +
Sbjct: 123 TGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFALAHLKPEGALLIKCFHGSGYS 182
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I+ + K+HF+ V KP ASR +S E FLL + +
Sbjct: 183 QIVEMFKRHFRVVAPRKPKASRDKSSETFLLGRQLK 218
>gi|295677139|ref|YP_003605663.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp.
CCGE1002]
gi|295436982|gb|ADG16152.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp.
CCGE1002]
Length = 220
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 83/216 (38%), Positives = 116/216 (53%), Gaps = 10/216 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLGSSPGSW
Sbjct: 3 KNKFNTAWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGSSPGSW 62
Query: 82 SQVAARIT---------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
SQ A + ++A+DIL MEP+ V F + DF + + + +
Sbjct: 63 SQYARNKLAGGSQRNAEREGGIDGTIIALDILPMEPVADVHFIQGDFREDSVLVQLEELV 122
Query: 133 -GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
DLV+SDMA G D R LC+ A FA L G LVK F G +
Sbjct: 123 GARQVDLVISDMAPNLSGVAIADAARIEHLCDLALEFAQSHLKPDGALLVKCFHGSGYSQ 182
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
I+ K+ F+ V KP ASR +S E F+L K ++
Sbjct: 183 IVEKFKRQFKVVAARKPKASRDKSSETFILGKHLKR 218
>gi|225717720|gb|ACO14706.1| ribosomal RNA methyltransferase CG11447 [Caligus clemensi]
Length = 249
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
S W+ R D YV++AQ EG+RARSAYKLL+INEK +IL+ +++ G +PGSW+QV
Sbjct: 48 SSSWIRRQSKDIYVKKAQSEGYRARSAYKLLEINEKFKILRPKMTVMECGGAPGSWTQVL 107
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIR-QAIGGNPDLVLSDM 143
+ S V++ D+LD +P+ DF + E I DLVLSDM
Sbjct: 108 TQKVHS----GEVISCDLLDYDPVDHAIILPQSDFTLPQTQEIILGHLKADGFDLVLSDM 163
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
A G ++ H + ++L T FAL N G FL K + G T D + LK+ ++ V
Sbjct: 164 APNASGMSELSHQQILNLSYEVTKFALRHSNKGAIFLTKLWDGEGTQDFISDLKRFYRNV 223
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
VKP ASR ES E+++ A F+
Sbjct: 224 QIVKPKASRKESAEIYIYASKFK 246
>gi|107022371|ref|YP_620698.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia cenocepacia
AU 1054]
gi|116689318|ref|YP_834941.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia cenocepacia
HI2424]
gi|170732617|ref|YP_001764564.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia cenocepacia
MC0-3]
gi|206559643|ref|YP_002230404.1| putative ribosomal RNA large subunit methyltransferase
[Burkholderia cenocepacia J2315]
gi|254245761|ref|ZP_04939082.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia cenocepacia
PC184]
gi|123371703|sp|Q1BXD0|RLME_BURCA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|143459622|sp|A0K6C1|RLME_BURCH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703285|sp|B1JZE9|RLME_BURCC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703286|sp|B4E5F3|RLME_BURCJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|105892560|gb|ABF75725.1| 23S rRNA Um-2552 2'-O-methyltransferase [Burkholderia cenocepacia
AU 1054]
gi|116647407|gb|ABK08048.1| 23S rRNA Um-2552 2'-O-methyltransferase [Burkholderia cenocepacia
HI2424]
gi|124870537|gb|EAY62253.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia cenocepacia
PC184]
gi|169815859|gb|ACA90442.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia cenocepacia
MC0-3]
gi|198035681|emb|CAR51568.1| putative ribosomal RNA large subunit methyltransferase
[Burkholderia cenocepacia J2315]
Length = 220
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 117/211 (55%), Gaps = 10/211 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQHWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGATPGSWSQYA 66
Query: 86 ARITGSNANN---------TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN- 135
+VA+DIL MEPI V F + DF + D + + + G
Sbjct: 67 RNKLAQGKKRDAEREGGIDGTIVALDILPMEPIADVHFLQGDFREDDVLHQLEEVLEGRA 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R LC+ A FA L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHLCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K+ F+ V KP ASR +S E F+L + +
Sbjct: 187 FKQQFKVVAPRKPKASRDKSSETFILGRQLK 217
>gi|170042115|ref|XP_001848783.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Culex
quinquefasciatus]
gi|167865651|gb|EDS29034.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Culex
quinquefasciatus]
Length = 306
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 66/202 (32%), Positives = 107/202 (52%), Gaps = 6/202 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y + A+ EGWRARSA+KL+ ++E I + R VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIYYRMAKEEGWRARSAFKLIHLDENFNIFEGVTRAVDLCAAPGSWSQVLSKKLY 64
Query: 90 ---GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DLVLSDMA 144
+ ++ +++A+D+ M P+ GV + D L + + I + G + LV+ D A
Sbjct: 65 ESRDKDKDDVKIIAVDLQAMAPLPGVTQLQGDITKLSTAQAIIEHFGNDQRAQLVICDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G ID L AA +L IGG F+ K F+G T + L+ F+KV
Sbjct: 125 PDVTGLHDIDEYIQSQLLLAALNITTHVLTIGGTFIAKIFRGHDTTLLYSQLRIFFEKVS 184
Query: 205 HVKPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 185 IAKPASSRNSSIEAFVVCQQYK 206
>gi|114611931|ref|XP_518934.2| PREDICTED: hypothetical protein LOC463224 [Pan troglodytes]
gi|332864346|ref|XP_003318261.1| PREDICTED: hypothetical protein LOC463224 [Pan troglodytes]
Length = 246
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 7/213 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
++ G+ WL RH+ DP+V+ A++E +R RSA+KLL++NE+HQIL+ R++D G++PG
Sbjct: 25 KNRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPG 84
Query: 80 SWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKFDFLDLD--SWEFIRQAI 132
+WSQVA + ++ V+ +D+L + P+ G F + S +
Sbjct: 85 AWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLP 144
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG D++LSDMA G R +DH R +SLC ++L GG FL KT+ G + +
Sbjct: 145 GGRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRL 204
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L + FQ V +KP ASR ES E++ LA +
Sbjct: 205 QRRLTEEFQNVRIIKPEASRKESSEVYFLATQY 237
>gi|209517186|ref|ZP_03266031.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp. H160]
gi|209502322|gb|EEA02333.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp. H160]
Length = 220
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 117/216 (54%), Gaps = 10/216 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLGSSPGSW
Sbjct: 3 KNKFNTAWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGSSPGSW 62
Query: 82 SQVAARITGS---------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
SQ A S + ++A+DIL MEP+ V F + DF + + + +
Sbjct: 63 SQYARNKLASGAQRNAEREGGIDGTIIALDILPMEPVADVHFIQGDFREDSVLVQLEELV 122
Query: 133 -GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
DLV+SDMA G D R LC+ A FA L G LVK F G +
Sbjct: 123 GARQVDLVISDMAPNLSGVAIADAARIEHLCDLALEFAQNHLKPDGALLVKCFHGSGYSQ 182
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
I+ K+ F+ V KP ASR +S E F+L K ++
Sbjct: 183 IVEKFKRQFKVVGARKPKASRDKSSETFILGKHLKR 218
>gi|301764809|ref|XP_002917816.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Ailuropoda melanoleuca]
Length = 329
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ + Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G I L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|281353664|gb|EFB29248.1| hypothetical protein PANDA_006186 [Ailuropoda melanoleuca]
Length = 320
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ + Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G I L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|74006842|ref|XP_862799.1| PREDICTED: similar to FtsJ homolog 1 isoform b isoform 2 [Canis
familiaris]
Length = 327
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ + Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G I L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSNVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|57111745|ref|XP_538022.1| PREDICTED: similar to Putative ribosomal RNA methyltransferase 1
(rRNA (uridine-2-O-)-methyltransferase) (JM23 protein)
isoform 1 [Canis familiaris]
Length = 329
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ + Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFHLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G I L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSNVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|190348381|gb|EDK40824.2| hypothetical protein PGUG_04922 [Meyerozyma guilliermondii ATCC
6260]
Length = 256
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query: 5 PGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQI 64
G+S L +++++S SS WL R +DP+ + A+ + +R+R+AYKL++++ K +
Sbjct: 33 SGTSKHCQLNVQIRSKS-SVSSERWLRRQKDDPHTKEAKKQHYRSRAAYKLIELDHKFSL 91
Query: 65 LQSNR-RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
+ N RIVDLG +PG+W+QVA + +++ +DI+ P G +F D
Sbjct: 92 FKRNTLRIVDLGFAPGAWTQVAMQRMAQLGQKPKILGVDIIPSTPPEGAQFLHGDIFSRK 151
Query: 124 SWEFIR-QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
+ + IR DLV+SDM T G + DHL +M LCE A A L G ++K
Sbjct: 152 THQEIRDNFPNNEVDLVMSDMMANTSGIKDNDHLASMELCEGALMLAASTLKTNGALVMK 211
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+ G + +K F+KV +KP A R ES EM+ + G
Sbjct: 212 FYTGREERQLEEKCRKMFKKVHRMKPSACRPESREMYFVCLG 253
>gi|254373876|ref|ZP_04989358.1| ribosomal large subunit methyltransferase J [Francisella novicida
GA99-3548]
gi|151571596|gb|EDN37250.1| ribosomal large subunit methyltransferase J [Francisella novicida
GA99-3548]
Length = 206
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 129/207 (62%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S S++ WL+ H +D YV +A G+R+R+++K+L+I +K+Q+ + N +VDLG++PG
Sbjct: 2 SKGSSTKKWLHEHTSDYYVIQANKLGYRSRASFKILEIQDKYQLFKPNMFVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WS+ + G N +++A+D+L+M PI GV+F + DF ++++ + + D V
Sbjct: 62 WSEQVIKYIGKN---GKLIALDLLEMAPIAGVEFIQGDFSSDETYQKLNTLVNNQKIDCV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ D +++ L E A FA LN G F+ K FQG +++ L L+++
Sbjct: 119 ISDMAPNLSGNKTSDQAKSIYLLELALDFANTNLNKNGSFVAKVFQGQGSDEYLKLVRES 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KVI KP +SRA+S E +++A F+
Sbjct: 179 FNKVIQFKPKSSRAKSREFYVVATEFK 205
>gi|238026783|ref|YP_002911014.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia glumae
BGR1]
gi|237875977|gb|ACR28310.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia glumae
BGR1]
Length = 220
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 115/211 (54%), Gaps = 10/211 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 7 NQSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYA 66
Query: 86 ARIT---------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN- 135
+ +VA+D+L MEP+ V F + DF + + + G
Sbjct: 67 RNKLALGKNRDAQREGGIDGMIVALDMLPMEPVADVHFIQGDFREDAVLHQLEALLDGRV 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SDMA G D R +C+ A F+ L G LVK F G + I+
Sbjct: 127 VDLVISDMAPNLSGVASADAARIEHVCDLALEFSQNHLKPDGALLVKCFHGSGYSQIVEK 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F+ V KP ASR +S E F+L + +
Sbjct: 187 FKHQFRTVAPRKPKASRDKSSETFILGRHLK 217
>gi|73541859|ref|YP_296379.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ralstonia eutropha
JMP134]
gi|83305667|sp|Q46Z98|RLME_CUPPJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|72119272|gb|AAZ61535.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Ralstonia eutropha
JMP134]
Length = 225
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 89/220 (40%), Positives = 123/220 (55%), Gaps = 11/220 (5%)
Query: 18 KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSS 77
K +S ++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ +++Q + IVDLG++
Sbjct: 3 KGKSKNKFNQSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIQPGQVIVDLGAA 62
Query: 78 PGSWSQVAARITGS------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
PGSWSQ A + + VVAIDIL MEP+ V F + DF + D + + +
Sbjct: 63 PGSWSQYARNKLAASPRATGGKPDGAVVAIDILPMEPVADVTFIQGDFREEDVFRQLEEV 122
Query: 132 I-----GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
+ G DLVLSDMA G D R LC+ A FA L G LVK F G
Sbjct: 123 VMAASGGAKIDLVLSDMAPNLSGVASADSARIEYLCDLALDFAQTHLKPDGALLVKCFHG 182
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ I+ K+ F+ V KP ASR +S E F+L + +
Sbjct: 183 SGYSQIVEKFKRQFKVVAPRKPKASRDKSSETFILGRYLK 222
>gi|300703813|ref|YP_003745415.1| 23S rRNA methyltransferase [Ralstonia solanacearum CFBP2957]
gi|299071476|emb|CBJ42798.1| 23S rRNA methyltransferase [Ralstonia solanacearum CFBP2957]
Length = 221
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 118/216 (54%), Gaps = 11/216 (5%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSW
Sbjct: 3 KNKFNQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDEQDKLIKPGQVIVDLGAAPGSW 62
Query: 82 SQVAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
SQ + +VAIDIL MEP+ V F + DF + + + +
Sbjct: 63 SQYVRNKLAASPRAKDGRIDGAIVAIDILPMEPVADVTFIQGDFREEAVFRQLEAIVLDA 122
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
GG DLVLSDMA G D R + E A FA L G L+K F G +
Sbjct: 123 TGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFAQAHLKPEGALLIKCFHGSGYS 182
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I+ + K+HF+ V KP ASR +S E FLL + +
Sbjct: 183 QIVEMFKRHFRVVAPRKPKASRDKSSETFLLGRQLK 218
>gi|15836699|ref|NP_297387.1| cell division protein [Xylella fastidiosa 9a5c]
gi|71275932|ref|ZP_00652215.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Xylella fastidiosa
Dixon]
gi|71900018|ref|ZP_00682163.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Xylella fastidiosa
Ann-1]
gi|170729314|ref|YP_001774747.1| cell division protein [Xylella fastidiosa M12]
gi|81548421|sp|Q9PH52|RLME_XYLFA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705325|sp|B0U1F2|RLME_XYLFM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|9104872|gb|AAF82907.1|AE003863_9 cell division protein [Xylella fastidiosa 9a5c]
gi|71163309|gb|EAO13028.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Xylella fastidiosa
Dixon]
gi|71730228|gb|EAO32314.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Xylella fastidiosa
Ann-1]
gi|167964107|gb|ACA11117.1| cell division protein [Xylella fastidiosa M12]
Length = 213
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H +DP+V++AQ EG R+R+AYKL +I ++ +IL+ N ++DLG++PG
Sbjct: 2 SHSKSSQRWLKEHFSDPFVKKAQAEGMRSRAAYKLEEILKRDRILRPNMVVIDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLV 139
WSQ + G + RV+A+DI+ M P++G++F + DF D + G DLV
Sbjct: 62 WSQQIRKQMG---DRGRVIALDIVKMAPLVGIEFLQGDFRDKAVLSQLEIMLKGQPVDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA + GG FL+K F G ++D + L+
Sbjct: 119 LSDMAPNKSGMDAMDQPRMMYLAELAMDFADIHVKPGGSFLIKLFHGVGSDDYIRQLRHR 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
++KV KP+ASR S E+++L G
Sbjct: 179 YKKVAIRKPLASRKRSPEVYILGDGK 204
>gi|254372405|ref|ZP_04987895.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. novicida GA99-3549]
gi|151570133|gb|EDN35787.1| ribosomal large subunit methyltransferase J [Francisella novicida
GA99-3549]
Length = 206
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/207 (35%), Positives = 129/207 (62%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S S++ WL+ H +D YV +A G+R+R+++K+L+I +K+Q+ + N ++DLG++PG
Sbjct: 2 SKGSSTKKWLHEHTSDYYVIQANKLGYRSRASFKILEIQDKYQLFKPNMFVIDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WS+ + G N +++A+D+L+M PI GV+F + DF ++++ + + D V
Sbjct: 62 WSEQVIKYIGKN---GKLIALDLLEMAPIAGVEFIQGDFSSDETYQKLNTLVNNQKIDCV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ D +++ L E A FA LN G F+ K FQG +++ L L+++
Sbjct: 119 ISDMAPNLSGNKTSDQAKSIYLLELALDFANTNLNKNGSFVAKVFQGQGSDEYLKLVRES 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KVI KP +SRA+S E +++A F+
Sbjct: 179 FNKVIQFKPKSSRAKSREFYVVATEFK 205
>gi|307174434|gb|EFN64935.1| Putative ribosomal RNA methyltransferase CG11447 [Camponotus
floridanus]
Length = 246
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 123/213 (57%), Gaps = 6/213 (2%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + SS+ WL R I DPYV++A+ E +R RSA+KLLQINEK++I ++D G++PG
Sbjct: 29 KGKKHSSQLWLMRQIRDPYVEKAKQENYRCRSAFKLLQINEKYKIFCPGLTVIDCGAAPG 88
Query: 80 SWSQVAARITGSNAN----NTRVVAIDILDMEPILGVKFF-KFDFLDLDSWEFIRQAIGG 134
SW+QVA +T S+A +V AID L P+ G DF + E + + G
Sbjct: 89 SWTQVATNLTNSHAKSQGPIGKVYAIDKLPFFPVEGATVLGNMDFTITKTQETLLALLQG 148
Query: 135 NP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDIL 193
D+VLSDMA G R IDH + L AA FAL++ I G ++K + GG + ++
Sbjct: 149 KKADVVLSDMAPNASGIRAIDHDNIILLAYAALKFALQITKIHGTLVIKVWDGGKSQELE 208
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + + V VKP A+R ES E F LA+GF+
Sbjct: 209 QNLLRFYNNVKIVKPDATRDESTEKFFLARGFK 241
>gi|296080818|ref|NP_001171684.1| FtsJ homolog 1 [Sus scrofa]
gi|197281892|gb|ACH57153.1| FtsJ-like protein 1 [Sus scrofa]
Length = 329
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVLQIQGDITQLTTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G I L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + KG+
Sbjct: 184 SSRNSSIEAFAVCKGY 199
>gi|7019377|ref|NP_037525.1| putative ribosomal RNA methyltransferase 2 [Homo sapiens]
gi|9910866|sp|Q9UI43|RRMJ2_HUMAN RecName: Full=Putative ribosomal RNA methyltransferase 2; AltName:
Full=Protein ftsJ homolog 2; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase
gi|6652820|gb|AAF22488.1|AF093415_1 cell division protein FtsJ [Homo sapiens]
gi|119607629|gb|EAW87223.1| hCG17134, isoform CRA_b [Homo sapiens]
gi|119607630|gb|EAW87224.1| hCG17134, isoform CRA_b [Homo sapiens]
Length = 246
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 122/213 (57%), Gaps = 7/213 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
++ G+ WL RH+ DP+V+ A++E +R RSA+KLL++NE+HQIL+ R++D G++PG
Sbjct: 25 KNRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPG 84
Query: 80 SWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQAIG 133
+WSQVA + ++ V+ +D+L + P+ G F D D + + I + +
Sbjct: 85 AWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLP 144
Query: 134 GNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G V+ SDMA G R +DH R +SLC ++L GG FL KT+ G + +
Sbjct: 145 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRL 204
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L + FQ V +KP ASR ES E++ LA +
Sbjct: 205 QRRLTEEFQNVRIIKPEASRKESSEVYFLATQY 237
>gi|56708013|ref|YP_169909.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110670484|ref|YP_667041.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. tularensis FSC198]
gi|134302197|ref|YP_001122166.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. tularensis WY96-3418]
gi|187931311|ref|YP_001891295.1| 23S rRNA methylase [Francisella tularensis subsp. mediasiatica
FSC147]
gi|208780502|ref|ZP_03247842.1| ribosomal RNA large subunit methyltransferase J [Francisella
novicida FTG]
gi|224457094|ref|ZP_03665567.1| 23S rRNA methylase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254368671|ref|ZP_04984685.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica FSC022]
gi|254370496|ref|ZP_04986501.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874812|ref|ZP_05247522.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. tularensis MA00-2987]
gi|81597551|sp|Q5NGD3|RLME_FRATT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|123359494|sp|Q14HT5|RLME_FRAT1 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|158513855|sp|A4IYP4|RLME_FRATW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703306|sp|B2SF85|RLME_FRATM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56604505|emb|CAG45545.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110320817|emb|CAL08928.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. tularensis FSC198]
gi|134049974|gb|ABO47045.1| ribosomal RNA large subunit methyltransferase J [Francisella
tularensis subsp. tularensis WY96-3418]
gi|151568739|gb|EDN34393.1| hypothetical protein FTBG_00272 [Francisella tularensis subsp.
tularensis FSC033]
gi|157121586|gb|EDO65763.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica FSC022]
gi|187712220|gb|ACD30517.1| 23S rRNA methylase [Francisella tularensis subsp. mediasiatica
FSC147]
gi|208743648|gb|EDZ89952.1| ribosomal RNA large subunit methyltransferase J [Francisella
novicida FTG]
gi|254840811|gb|EET19247.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. tularensis MA00-2987]
Length = 206
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 129/207 (62%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S S++ WL+ H +D YV +A G+R+R+++K+L+I +K+Q+ + N +VDLG++PG
Sbjct: 2 SKGSSTKKWLHEHTSDYYVIQANKLGYRSRASFKILEIQDKYQLFKPNMFVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WS+ + G N +++A+D+L+M PI GV+F + DF ++++ + + D V
Sbjct: 62 WSEQVIKYIGKN---GKLIALDLLEMAPIAGVEFIQGDFSSDETYQKLNTLVNNQKIDCV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ D +++ L E A FA LN G F+ K FQG +++ L L+++
Sbjct: 119 ISDMAPNLSGNKTSDQAKSIYLLELALDFANTNLNKNGSFVAKVFQGQGSDEYLKLVRES 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KVI KP +SRA+S E +++A F+
Sbjct: 179 FNKVIQFKPKSSRAKSREFYVIATEFK 205
>gi|118150968|ref|NP_001071402.1| FtsJ homolog 1 [Bos taurus]
gi|117306288|gb|AAI26604.1| FtsJ homolog 1 (E. coli) [Bos taurus]
gi|296470729|gb|DAA12844.1| FtsJ homolog 1 [Bos taurus]
Length = 307
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G I L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + KG+
Sbjct: 184 SSRNSSIEAFAVCKGY 199
>gi|282159201|gb|ADA78592.1| ribosomal RNA large subunit methyltransferase J [Francisella
tularensis subsp. tularensis NE061598]
Length = 206
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 129/207 (62%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S S++ WL+ H +D YV +A G+R+R+++K+L+I +K+Q+ + N +VDLG++PG
Sbjct: 2 SKGSSTKKWLHEHTSDYYVIQANKLGYRSRASFKILEIQDKYQLFKPNMFVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WS+ + G N +++A+D+L+M PI GV+F + DF ++++ + + D V
Sbjct: 62 WSEQVIKYIGKN---GKLIALDLLEMAPIAGVEFIQGDFSSDETYQKLNTFVNNQKIDCV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ D +++ L E A FA LN G F+ K FQG +++ L L+++
Sbjct: 119 ISDMAPNLSGNKTSDQAKSIYLLELALDFANTNLNKNGSFVAKVFQGQGSDEYLKLVRES 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KVI KP +SRA+S E +++A F+
Sbjct: 179 FNKVIQFKPKSSRAKSREFYVIATEFK 205
>gi|54112769|gb|AAV29018.1| NT02FT0627 [synthetic construct]
Length = 206
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 128/204 (62%), Gaps = 4/204 (1%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
S++ WL+ H +D YV +A G+R+R+++K+L+I +K+Q+ + N +VDLG++PG WS+
Sbjct: 5 SSTKKWLHEHTSDYYVIQANKLGYRSRASFKILEIQDKYQLFKPNMFVVDLGAAPGGWSE 64
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSD 142
+ G N +++A+D+L+M PI GV+F + DF ++++ + + D V+SD
Sbjct: 65 QVIKYIGKN---GKLIALDLLEMAPIAGVEFIQGDFSSDETYQKLNTLVNNQKIDCVISD 121
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
MA G++ D +++ L E A FA LN G F+ K FQG +++ L L+++ F K
Sbjct: 122 MAPNLSGNKTSDQAKSIYLLELALDFANTNLNKNGSFVAKVFQGQGSDEYLKLVRESFNK 181
Query: 203 VIHVKPVASRAESVEMFLLAKGFR 226
VI KP +SRA+S E +++A F+
Sbjct: 182 VIQFKPKSSRAKSREFYVIATEFK 205
>gi|170695458|ref|ZP_02886603.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia graminis
C4D1M]
gi|170139649|gb|EDT07832.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia graminis
C4D1M]
Length = 220
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 81/216 (37%), Positives = 117/216 (54%), Gaps = 10/216 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLGS+PGSW
Sbjct: 3 KNKFNTAWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGSTPGSW 62
Query: 82 SQVAARITGS---------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
SQ A + ++A+D+L MEP+ V F + DF + + + +
Sbjct: 63 SQYARNKLAKGSQRDAERQGGIDGTIIALDLLPMEPVADVHFIQGDFREEAVLGQLEELV 122
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G DLV+SDMA G D R LC+ A F+ L G LVK F G +
Sbjct: 123 GERQVDLVISDMAPNLSGVALADAARIEHLCDLALEFSQNHLKPDGALLVKCFHGSGYSQ 182
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
I+ K+ F+ V KP ASR +S E F+L K ++
Sbjct: 183 IVEKFKRQFKVVAARKPKASRDKSSETFILGKHLKR 218
>gi|296158196|ref|ZP_06841028.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp. Ch1-1]
gi|295891532|gb|EFG71318.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia sp. Ch1-1]
Length = 220
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 82/216 (37%), Positives = 117/216 (54%), Gaps = 10/216 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ +++++ + IVDLGS+PGSW
Sbjct: 3 KNKFNTAWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRAGQVIVDLGSTPGSW 62
Query: 82 SQVAARITGS---------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
SQ A + ++A+D+L MEPI V F + DF + + + +
Sbjct: 63 SQYARNKLAKGAQRDAEREGGIDGTIIALDLLPMEPIADVHFIQGDFREDSVIAQLEELV 122
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G DLV+SDMA G D R LC+ A F+ L G LVK F G +
Sbjct: 123 GERQVDLVISDMAPNLSGVAVADAARIEHLCDLALEFSQNHLKPDGALLVKCFHGSGYSQ 182
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
I+ K F+ V KP ASR +S E F+L K ++
Sbjct: 183 IVEKFKHQFKVVAARKPKASRDKSSETFILGKHLKR 218
>gi|290996969|ref|XP_002681054.1| predicted protein [Naegleria gruberi]
gi|284094677|gb|EFC48310.1| predicted protein [Naegleria gruberi]
Length = 239
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 121/211 (57%), Gaps = 5/211 (2%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSPG 79
+ SS WL+R D +V++A+ +G+R+R+A+KLL+I+EK + L+ ++ I+DLG++PG
Sbjct: 28 TQTKSSGRWLDRQRRDTFVKQAKAQGYRSRAAFKLLEIDEKWGKFLEKSKVIIDLGAAPG 87
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILG----VKFFKFDFLDLDSWEFIRQAIGGN 135
SWSQVAA S + +D+ ++ + K F D G
Sbjct: 88 SWSQVAAEKMKSGGKLITIDILDMEPLKSPPNKNLQIIQLKGKFEDSIPQLRSYLNEGEF 147
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D +LSDMA T G + +DH R + LC + FA E+L GG L+K F G +
Sbjct: 148 ADCLLSDMAPNTSGVKSLDHNRIIFLCNTSIDFAFEVLKPGGCMLMKIFSGPEDATLKND 207
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LK++F+ V VKP +SR+ES E+++LA+GF+
Sbjct: 208 LKQYFENVNFVKPASSRSESSEVYVLAEGFK 238
>gi|114778047|ref|ZP_01452947.1| cell division protein (filamentous temperature sensitivity, 23S
rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)
[Mariprofundus ferrooxydans PV-1]
gi|114551653|gb|EAU54206.1| cell division protein (filamentous temperature sensitivity, 23S
rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)
[Mariprofundus ferrooxydans PV-1]
Length = 220
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 125/216 (57%), Gaps = 6/216 (2%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQI-LQSNRRI 71
+ Q+ K+++ + +S W RH NDP+V+RAQ EG R+R+A+KL +I ++H + + N +
Sbjct: 1 MAQQSKSKAARKTS-AWFQRHSNDPHVKRAQKEGKRSRAAFKLTEILDEHGLKISKNAVV 59
Query: 72 VDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
VDLG +PGSWS AR G V+ ID+L ++ I GV + DF D + +A
Sbjct: 60 VDLGCAPGSWSVELARRVGPG---GIVIGIDLLPLDGITGVTLIQGDFDSPDGQAALAEA 116
Query: 132 IGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
+ G DLV+SDMA G + +D +R + L E FA + L GGD L+KTF G +
Sbjct: 117 LQGRMVDLVVSDMAPEMAGDKLVDQMRMIGLNEMTLHFARQYLRPGGDILMKTFMGEGYD 176
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L F+K+ ++KP ASR S E FLL + F+
Sbjct: 177 AFRKELGLSFKKIKNIKPAASRKTSSEFFLLGREFK 212
>gi|109065839|ref|XP_001086161.1| PREDICTED: putative ribosomal RNA methyltransferase 2 isoform 2
[Macaca mulatta]
Length = 246
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 121/214 (56%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
++ G+ WL RH+ DP+V+ A++ +R RSA+KLL++NE+HQIL+ R++D G++PG
Sbjct: 25 KNRTGAEHLWLTRHLRDPFVKAAKVASYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPG 84
Query: 80 SWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKFDFLDLD--SWEFIRQAI 132
+WSQVA + ++ V+ +D+L + P+ G F + S +
Sbjct: 85 AWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLP 144
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG D++LSDMA G R +DH R +SLC ++L G FL KT+ G ++ +
Sbjct: 145 GGRADVILSDMAPNATGFRDLDHDRLISLCLTLLSMTPDILQPRGTFLCKTWAGSQSHRL 204
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + FQ V +KP ASR ES E++ LA ++
Sbjct: 205 QRRLTEEFQNVRIIKPEASRKESSEVYFLATQYQ 238
>gi|332259367|ref|XP_003278759.1| PREDICTED: putative ribosomal RNA methyltransferase 2-like
[Nomascus leucogenys]
Length = 423
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 83/234 (35%), Positives = 127/234 (54%), Gaps = 14/234 (5%)
Query: 4 PPGSSSRRGLTQK-------VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLL 56
P SS G Q+ + ++ G+ WL RH+ DP+V+ A++E +R RSA+KLL
Sbjct: 182 PGRSSRGGGRPQRQWFHTVGSRCKNRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLL 241
Query: 57 QINEKHQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPILG 111
++NE+HQIL+ R++D G++PG+WSQVA + ++ V+ +D+L + P+ G
Sbjct: 242 EVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEG 301
Query: 112 VKFFKFDFLDLD--SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
F + S + GG D++LSDMA G R +DH R +SLC
Sbjct: 302 ATFLCPADVTDPRTSQRILEVLPGGRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVT 361
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
++L GG FL KT+ G + + L + FQ V +KP ASR ES E++ LA
Sbjct: 362 PDILQPGGTFLCKTWAGSLSRRLQRRLTEEFQNVRIMKPEASRKESSEVYFLAT 415
>gi|91784538|ref|YP_559744.1| putative ribosomal RNA large subunit methyltransferase
[Burkholderia xenovorans LB400]
gi|122970262|sp|Q13W47|RLME_BURXL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91688492|gb|ABE31692.1| 23S rRNA Um-2552 2'-O-methyltransferase [Burkholderia xenovorans
LB400]
Length = 220
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 82/216 (37%), Positives = 118/216 (54%), Gaps = 10/216 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ +++++ + IVDLGS+PGSW
Sbjct: 3 KNKFNTAWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRAGQVIVDLGSTPGSW 62
Query: 82 SQVAARITGS---------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
SQ A + ++A+D+L MEPI V F + DF + + + +
Sbjct: 63 SQYARNKLAKGAQRDAEREGGIDGTIIALDLLPMEPIADVHFIQGDFREDSVIAQLEELV 122
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G DLV+SDMA G D R LC+ A F+ L G LVK F G +
Sbjct: 123 GERQVDLVISDMAPNLSGVAVADAARIEHLCDLALEFSQNHLKPDGALLVKCFHGSGYSQ 182
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
I+ K+ F+ V KP ASR +S E F+L K ++
Sbjct: 183 IVEKFKRQFRVVAARKPKASRDKSSETFILGKHLKR 218
>gi|327282720|ref|XP_003226090.1| PREDICTED: putative ribosomal RNA methyltransferase 2-like [Anolis
carolinensis]
Length = 241
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/225 (34%), Positives = 123/225 (54%), Gaps = 12/225 (5%)
Query: 14 TQKVKN-----RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN 68
QKV ++ G+ WL RH +DPYV++A+ +R RSA+KL++I++KH IL+
Sbjct: 14 CQKVHTAIPHLKAKTGAEHRWLERHFSDPYVKKARQRSYRCRSAFKLIEIDDKHGILRPG 73
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANN-----TRVVAIDILDMEPILGVKFFKFDFLDLD 123
+VD G++PG+W+QVA + + ++ V+ D+L + P+ G F L
Sbjct: 74 LHVVDCGTAPGAWAQVAVQRVNAEGSDPDTPVGFVLGFDLLHISPLEGAVFLPHSDLTDP 133
Query: 124 S--WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV 181
S + G D+VLSDMA G R++DH R + LC + A +L+ GG L
Sbjct: 134 STRQKIRDSLPKGKADVVLSDMAPNATGIRELDHDRLIRLCLSLLDLAPHILHPGGTLLC 193
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K ++ + + L + F++V +KP ASR ES EM+ LAK ++
Sbjct: 194 KFWESKESRLLQKRLTQDFKEVKSIKPQASRKESAEMYYLAKLYK 238
>gi|187924839|ref|YP_001896481.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia
phytofirmans PsJN]
gi|226703289|sp|B2SZR9|RLME_BURPP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|187716033|gb|ACD17257.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia
phytofirmans PsJN]
Length = 220
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 83/216 (38%), Positives = 115/216 (53%), Gaps = 10/216 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLGS PGSW
Sbjct: 3 KNKFNTAWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDRLIRPGQVIVDLGSVPGSW 62
Query: 82 SQVAARITGS---------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
SQ A + ++A+DIL MEPI V F + DF + + + +
Sbjct: 63 SQYARNKLAKGAQRDAEREGGIDGTIIALDILPMEPIADVTFIQGDFREDTVLGQLEELV 122
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G DLV+SDMA G D R LC+ A F+ L G LVK F G +
Sbjct: 123 GERQVDLVISDMAPNLSGVAVADAARIEHLCDLALEFSQNHLKQDGALLVKCFHGSGYSQ 182
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
I+ K F+ V KP ASR +S E F+L K ++
Sbjct: 183 IVEKFKHQFKVVAARKPKASRDKSSETFILGKHLKR 218
>gi|71899230|ref|ZP_00681392.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Xylella fastidiosa
Ann-1]
gi|71730963|gb|EAO33032.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Xylella fastidiosa
Ann-1]
Length = 213
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H +DP+V++AQ EG R+R+AYKL +I ++ +IL+ N +VDLG++PG
Sbjct: 2 SHSKSSQRWLKEHFSDPFVKKAQAEGMRSRAAYKLEEILKRDRILRPNMVVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLV 139
WSQ + G ++ RV+A+DI+ M P++G++F + DF D + G DLV
Sbjct: 62 WSQQIRKQMG---DSGRVIALDIVKMAPLVGIEFLQGDFRDKAVLSQLEIMLKGQPVDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA + GG FL+K F G ++ + L+
Sbjct: 119 LSDMAPNKSGIDVMDQPRMMYLAELAMDFADIHVKPGGSFLIKLFHGVGSDGYIRQLRHR 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
++KV KP+ASR S E+++L G
Sbjct: 179 YKKVAIRKPLASRKRSPEVYILGDGK 204
>gi|225717054|gb|ACO14373.1| ribosomal RNA methyltransferase 2 [Esox lucius]
Length = 242
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 66/215 (30%), Positives = 120/215 (55%), Gaps = 7/215 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + + W+ R +NDP+V+ A + +R RSA+KLL+I++K+++L+ ++D G++PG
Sbjct: 26 KGKSTADQRWIVRQLNDPFVKAAHVHNYRCRSAFKLLEIDDKYKLLKPGFSVIDCGAAPG 85
Query: 80 SWSQVAARITGSNANN-----TRVVAIDILDMEPILGVKFFKFDFLDLDS--WEFIRQAI 132
+WSQVA + S + VV ID+ + P+ G F + + ++
Sbjct: 86 AWSQVAVQRVNSTGSYEEFPRGTVVGIDLQRIAPLDGAHFLSNCDITDPVTHAKLLKLLP 145
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG ++LSDMA G +++DH + +++ + A ++L GG + K + G + +
Sbjct: 146 GGQAHIILSDMAPNASGFKEMDHEKLITMSLSLMDLADKVLRPGGSLICKYWDGALASVL 205
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L F++V +KP ASR ES E+FLLA+ +R+
Sbjct: 206 QARLSAVFREVRTIKPKASRKESSELFLLARSYRE 240
>gi|307202661|gb|EFN81981.1| Putative ribosomal RNA methyltransferase CG11447 [Harpegnathos
saltator]
Length = 246
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 122/213 (57%), Gaps = 6/213 (2%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + SS+ WL R + DPYV++A+ E +R RSA+KLL+I E+ I + + +VD G++PG
Sbjct: 29 KHKKHSSQQWLVRQLRDPYVEKAKQERYRCRSAFKLLEIQERFNIFKPGQVVVDCGAAPG 88
Query: 80 SWSQVAARITGSNANN----TRVVAIDILDMEPILG-VKFFKFDFLDLDSWEFIRQAIGG 134
SW++VA ++ +V A+D L P+ G V DF + E +R+ +
Sbjct: 89 SWTEVAVNAINASGKKDGSVGKVFAVDKLPFYPVEGAVVLSGMDFTSASTQEELRKTMQD 148
Query: 135 NP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDIL 193
+ D+VLSDMA G R+IDH + L +A FAL+M G F+VK + G T +
Sbjct: 149 DKADVVLSDMAPNASGVREIDHDNIIMLAYSAMKFALQMNKPDGTFVVKIWDGRKTQQLE 208
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ + + +V V+P A+R ES EMF LA+ F+
Sbjct: 209 QDMLRFYNRVRIVRPNATRDESTEMFFLARDFK 241
>gi|290974158|ref|XP_002669813.1| predicted protein [Naegleria gruberi]
gi|284083365|gb|EFC37069.1| predicted protein [Naegleria gruberi]
Length = 303
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 6/197 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
+R D + ++A+ EGWRARSA+KLLQ++E+ I ++ +R VDL ++PGSWSQV +
Sbjct: 5 SREKRDIFYRKAKQEGWRARSAFKLLQVDEEFNIFENVKRAVDLCAAPGSWSQVLQQ--- 61
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ +V++D+ +M P+ GV + D + E I G LV+ D A G
Sbjct: 62 --EEDAIIVSVDLQEMAPLEGVIEIQGDITSEKTAEEIVHHFKGKKAQLVVCDGAPDVTG 119
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
ID + L AA +L GG F+ K F+G + F++V KP
Sbjct: 120 MHDIDEYIQLQLILAALNITSHVLEEGGSFVSKIFRGKDITLLYSQCSIFFERVYCAKPK 179
Query: 210 ASRAESVEMFLLAKGFR 226
+SR S+E F++ KGF+
Sbjct: 180 SSRNSSLESFVVCKGFK 196
>gi|109130592|ref|XP_001097658.1| PREDICTED: putative ribosomal RNA methyltransferase 1 [Macaca
mulatta]
Length = 329
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++++ Q+ Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|121998550|ref|YP_001003337.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halorhodospira halophila
SL1]
gi|143460291|sp|A1WXX3|RLME_HALHL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|121589955|gb|ABM62535.1| 23S rRNA Um-2552 2'-O-methyltransferase [Halorhodospira halophila
SL1]
Length = 212
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Query: 18 KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSS 77
+ R +S+ +RH +DP+V+RA+ EGWR+R+A KL I+++ + + + +VDLG++
Sbjct: 5 RRRRRGCNSQARRSRHESDPFVRRARAEGWRSRAALKLEAIDQRDGLFRPGQVVVDLGAA 64
Query: 78 PGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
PG WSQ+ A GS RVVAID+L+M+P+ GV F DF + + +A+ G P
Sbjct: 65 PGGWSQLVAPKVGS---AGRVVAIDLLEMDPLPGVTFLHADFSTDEGLRAVERALEGRPV 121
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
D+VLSDMA GH +D M L E A FA + L+ GDFLVK F G + L
Sbjct: 122 DIVLSDMAPNLTGHNAVDQPAAMGLAELAADFAGQFLHKNGDFLVKVFHGEGFDAFRGDL 181
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKG 224
+ F +V+ KP ASR+ S E++LLA+G
Sbjct: 182 TRRFSRVLSRKPDASRSGSREVYLLARG 209
>gi|118497045|ref|YP_898095.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. novicida U112]
gi|194324280|ref|ZP_03058054.1| ribosomal RNA large subunit methyltransferase J [Francisella
tularensis subsp. novicida FTE]
gi|143460128|sp|A0Q526|RLME_FRATN RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|118422951|gb|ABK89341.1| 23S rRNA methylase [Francisella novicida U112]
gi|194321727|gb|EDX19211.1| ribosomal RNA large subunit methyltransferase J [Francisella
tularensis subsp. novicida FTE]
gi|328676509|gb|AEB27379.1| Cell division protein ftsJ / Ribosomal RNA large subunit
methyltransferase J [Francisella cf. novicida Fx1]
Length = 206
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 128/207 (61%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S S++ WL+ H +D YV +A G+R+R+++K+L+I K+Q+ + N +VDLG++PG
Sbjct: 2 SKGSSTKKWLHEHTSDYYVIQANKLGYRSRASFKILEIQNKYQLFKPNMFVVDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WS+ + G N +++A+D+L+M PI GV+F + DF ++++ + + D V
Sbjct: 62 WSEQVIKYIGKN---GKLIALDLLEMAPIAGVEFIQGDFSSDETYQKLNTLVNNQKIDCV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ D +++ L E A FA LN G F+ K FQG +++ L L+++
Sbjct: 119 ISDMAPNLSGNKTSDQAKSIYLLELALDFANTNLNKNGSFVAKVFQGQGSDEYLKLVRES 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KVI KP +SRA+S E +++A F+
Sbjct: 179 FNKVIQFKPKSSRAKSREFYVIATEFK 205
>gi|28198008|ref|NP_778322.1| cell division protein [Xylella fastidiosa Temecula1]
gi|182680634|ref|YP_001828794.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Xylella fastidiosa M23]
gi|81439222|sp|Q87F66|RLME_XYLFT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705324|sp|B2I696|RLME_XYLF2 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|28056068|gb|AAO27971.1| cell division protein [Xylella fastidiosa Temecula1]
gi|182630744|gb|ACB91520.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Xylella fastidiosa M23]
gi|307579093|gb|ADN63062.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 213
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ WL H +DP+V++AQ EG R+R+AYKL +I ++ +IL+ N ++DLG++PG
Sbjct: 2 SHSKSSQRWLKEHFSDPFVKKAQAEGMRSRAAYKLEEILKRDRILRPNMVVIDLGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLV 139
WSQ + G ++ RV+A+DI+ M P++G++F + DF D + G DLV
Sbjct: 62 WSQQIRKQMG---DSGRVIALDIVKMAPLVGIEFLQGDFRDKAVLSQLEIMLKGQPVDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G +D R M L E A FA + GG FL+K F G ++ + L+
Sbjct: 119 LSDMAPNKSGIDVMDQPRMMYLAELAMDFADIHVKPGGSFLIKLFHGVGSDGYIRQLRHR 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
++KV KP+ASR S E+++L G
Sbjct: 179 YKKVAIRKPLASRKRSPEVYILGDGK 204
>gi|198428770|ref|XP_002127655.1| PREDICTED: similar to FtsJ homolog 1 [Ciona intestinalis]
Length = 322
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 106/201 (52%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN-RRIVDLGSSPGSWSQVAARIT 89
++ D Y + A+ +GWRARSA+KLL ++E+ + + +++VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDVYYRLAKEQGWRARSAFKLLHLDEEFNLFHNGVKKVVDLCAAPGSWSQVLSRKL 64
Query: 90 G----SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
N + ++VA+D+ M + GV + D ++ + + I G DLV+ D A
Sbjct: 65 RGTEVENNKDVKIVAVDLQAMADLPGVIQLQGDITNVSTAQSIISHFEGESADLVVCDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G ID L AA +L +GG F+ K F+G + L+ F+KV
Sbjct: 125 PDVTGLHDIDEYIQAQLLLAALNITTHVLKLGGTFVAKIFRGKDVTLLYAQLRLFFKKVT 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP +SR S+E F++ + +
Sbjct: 185 CAKPRSSRNSSIEAFVVCENY 205
>gi|157820165|ref|NP_001100595.1| putative ribosomal RNA methyltransferase 2 [Rattus norvegicus]
gi|149035019|gb|EDL89739.1| rCG42633 [Rattus norvegicus]
Length = 246
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 124/223 (55%), Gaps = 8/223 (3%)
Query: 11 RGLTQKV-KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
R L V + G+ WL RH+ DP+V+ A+ E +R RSA+KLL++NEKH IL+
Sbjct: 15 RRLHTAVCHYKGRTGAEHLWLMRHLKDPFVKAAKAESYRCRSAFKLLEMNEKHHILRPGL 74
Query: 70 RIVDLGSSPGSWSQVAARITGSNA-----NNTRVVAIDILDMEPILGVKFFKF-DFLDLD 123
R++D G++PG+WSQVA + + V+ +D+L M P+ G F D D
Sbjct: 75 RVLDCGAAPGAWSQVAVQSVNATGADSSSPMGFVLGVDLLHMFPLAGATFLCPADVTDPR 134
Query: 124 SWEFIRQAIGGNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
+++ I + + V+ SDMA G R +DH R +SLC A+++L+ GG L K
Sbjct: 135 TFQRILELLPRRRADVILSDMAPNATGIRDLDHDRLISLCLTLVDMAVDILHPGGTLLCK 194
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
T+ G ++ + L + F+ VKP ASR ES E++LLA +
Sbjct: 195 TWAGSKSHLLQKRLAQEFRSTRVVKPEASRKESAEVYLLATQY 237
>gi|45201131|ref|NP_986701.1| AGR036Wp [Ashbya gossypii ATCC 10895]
gi|44985914|gb|AAS54525.1| AGR036Wp [Ashbya gossypii ATCC 10895]
Length = 306
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 8/205 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ +G+RARSA+KLLQ+N++ L +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDLYYRKAKEQGFRARSAFKLLQLNDEFHFLDGVQRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNTR--VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
V +R + NT+ +VA+D+ M I V + D + I + G D V
Sbjct: 58 VLSRELFPDGKNTKKRIVAVDLQPMSRIEHVTTLQADITHPRTLTKIIELFKGEKADFVC 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G +D L +A + +L GG F+ K F+G + + L F
Sbjct: 118 SDGAPDVTGLHDLDEYVQQQLILSALKLTVSLLAPGGCFVAKIFRGRDIDMLYSQLGLLF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
KV KP +SR S+E F++ +G+
Sbjct: 178 DKVTCAKPRSSRGTSLESFIVCQGY 202
>gi|94676772|ref|YP_589062.1| ribosomal RNA large subunit methyltransferase J [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|143459434|sp|Q1LSK2|RLME_BAUCH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|94219922|gb|ABF14081.1| ribosomal RNA large subunit methyltransferase J [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 209
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 112/208 (53%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS WL + D YV +AQ +G R+R+ +KL QI + ++ Q I+DLG++PG
Sbjct: 4 KKRSASSNRWLQESLKDKYVVQAQKKGLRSRAWFKLDQIQKSDRLFQPYMTIIDLGAAPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNPDL 138
SWSQ G N + V+A D+ M P+ GV F + DF + + I Q +
Sbjct: 64 SWSQYVTTQIGKNGH---VIACDLRYMSPLSGVDFIQGDFCNKQVLQAILQRLENKKAQV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
+LSDM+ G +ID ++M L E A +L GG F+VK FQG + +C +
Sbjct: 121 ILSDMSPNFSGKPEIDIPKSMYLVEKALKMCRYLLIPGGTFIVKVFQGDGFYEYICSMHA 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V +KP ASR+ S E++L+AKG +
Sbjct: 181 LFNTVKIIKPDASRSRSREVYLIAKGHK 208
>gi|21593533|gb|AAM65500.1| cell division-like protein [Arabidopsis thaliana]
Length = 308
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 9/204 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
+R D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
+ + +VAID+ M PI GV + D + + IR G DLV+
Sbjct: 65 LPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTEVVIRHFDGCKADLVVC 124
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L A +L GG F+ K F+G T+ + C LK F
Sbjct: 125 DGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQLKLFFP 184
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F + + +
Sbjct: 185 TVTFAKPKSSRNSSIEAFAVCENY 208
>gi|297679750|ref|XP_002817683.1| PREDICTED: putative ribosomal RNA methyltransferase 2-like isoform
1 [Pongo abelii]
gi|297679752|ref|XP_002817684.1| PREDICTED: putative ribosomal RNA methyltransferase 2-like isoform
2 [Pongo abelii]
Length = 246
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 7/213 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
++ G+ WL RH+ DP+V+ A++E +R RSA+KLL++NE+HQIL+ R++D G++PG
Sbjct: 25 KNRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPG 84
Query: 80 SWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKFDFLDLD--SWEFIRQAI 132
+WSQVA + ++ V+ +D+L + P+ G F + S +
Sbjct: 85 AWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLP 144
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG D++LSDMA G R +DH R +SLC ++L GG FL KT+ G + +
Sbjct: 145 GGRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRQL 204
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L + FQ V +KP ASR ES E++ LA +
Sbjct: 205 QRRLTEEFQNVRIIKPEASRRESSEVYFLATQY 237
>gi|302846344|ref|XP_002954709.1| hypothetical protein VOLCADRAFT_102215 [Volvox carteri f.
nagariensis]
gi|300260128|gb|EFJ44350.1| hypothetical protein VOLCADRAFT_102215 [Volvox carteri f.
nagariensis]
Length = 297
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 12/209 (5%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D + ++A+ EGWRARSAYKLLQI+E I VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIFYRKAKEEGWRARSAYKLLQIDEAFDIFSGVAHAVDLCAAPGSWSQ 57
Query: 84 VAARIT------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
V +R + + +VA+D+ M PI GV + D + + + G P
Sbjct: 58 VLSRKLYLPAVRSGSPSPPTIVAVDLQPMAPIEGVIQLQGDITSEVTAKQVISHFDGQPA 117
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLV+ D A G +D L AA +L GG F+ K F+G + L
Sbjct: 118 DLVVCDGAPDVTGLHDLDEYVQAQLLLAALSIVCAVLRPGGTFVAKIFRGKDVALLYSQL 177
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
K F +V KP +SR S+E F++ + F
Sbjct: 178 KLLFPEVYVAKPKSSRNSSIEAFVVGRRF 206
>gi|294948998|ref|XP_002786001.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
gi|239900109|gb|EER17797.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
Length = 297
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 105/205 (51%), Gaps = 8/205 (3%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN-RRIVDLGSSPGSWSQVAARI 88
L++ D Y + A+ EG+RARSAYKLLQ++E+ IL + R+VDL ++PGSWSQV ++
Sbjct: 4 LSKDKRDIYYRLAKEEGYRARSAYKLLQVDEQFHILTDDLERVVDLCAAPGSWSQVLSKK 63
Query: 89 TGSN------ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLS 141
N +V++D+ +M PI V + D + + + GG DLV+
Sbjct: 64 LCENLTGSDDKKKPLIVSVDLQEMAPIPDVTCIQGDITSEKTVKEVLDCFGGQLSDLVVC 123
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA +L GG F+ K F+G + + + F+
Sbjct: 124 DGAPDVTGMHDMDEYVQFQLLLAALNITTLLLKPGGSFVAKVFRGENVDLLYAKMYVFFE 183
Query: 202 KVIHVKPVASRAESVEMFLLAKGFR 226
V KP +SR SVE F++ K FR
Sbjct: 184 CVWVAKPRSSRNSSVESFIVCKNFR 208
>gi|321464186|gb|EFX75196.1| hypothetical protein DAPPUDRAFT_306870 [Daphnia pulex]
Length = 242
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 78/228 (34%), Positives = 124/228 (54%), Gaps = 7/228 (3%)
Query: 7 SSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
SSS + + SS++WL R +ND YV +A++E +RARSA+KL++I++KH+ L+
Sbjct: 13 SSSTCFKKVPDRLKGRSKSSQEWLTRQMNDEYVLKAKMENYRARSAFKLIEIDDKHKFLK 72
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILG-VKFFKFDFL 120
+V+ G++PG+W+QV + + + VA+D+ M PI G V DF
Sbjct: 73 PGDVVVECGAAPGAWTQVCVKRINATGKVSSQLKGKHVAVDLQPMYPIEGAVILAPLDFT 132
Query: 121 DLDSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
S I + +GG + VLSDMA G R +D R + L + +A ++ G
Sbjct: 133 KSLSQTRITEILGGQLANAVLSDMAPAASGIRDLDQDRILELAYSVLRYAQQISMDGATL 192
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L+K + GG + + H+ +V VKP +SR +S EMF+LA F+K
Sbjct: 193 LIKLWAGGRIKQLENEIALHYSQVKVVKPPSSRQDSAEMFILASNFKK 240
>gi|89255843|ref|YP_513205.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica LVS]
gi|115314330|ref|YP_763053.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica OSU18]
gi|156501823|ref|YP_001427888.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|167010065|ref|ZP_02274996.1| ribosomal RNA large subunit methyltransferase J [Francisella
tularensis subsp. holarctica FSC200]
gi|254367205|ref|ZP_04983235.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica 257]
gi|290954398|ref|ZP_06559019.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica URFT1]
gi|295312175|ref|ZP_06802980.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica URFT1]
gi|122325637|sp|Q0BNB8|RLME_FRATO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|122501138|sp|Q2A4Z7|RLME_FRATH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|189040692|sp|A7NAC9|RLME_FRATF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|89143674|emb|CAJ78873.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica LVS]
gi|115129229|gb|ABI82416.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica OSU18]
gi|134253025|gb|EBA52119.1| ribosomal large subunit methyltransferase J [Francisella tularensis
subsp. holarctica 257]
gi|156252426|gb|ABU60932.1| ribosomal RNA large subunit methyltransferase J [Francisella
tularensis subsp. holarctica FTNF002-00]
Length = 206
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 76/207 (36%), Positives = 129/207 (62%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S S++ WL+ H +D YV +A G+R+R+++K+L+I +K+Q+ + N +VDLG+SPG
Sbjct: 2 SKGSSTKKWLHEHTSDYYVIQANKLGYRSRASFKILEIQDKYQLFKPNMFVVDLGASPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WS+ + G N +++A+D+L+M PI GV+F + DF ++++ + + D V
Sbjct: 62 WSEQVIKYIGKN---GKLIALDLLEMAPIAGVEFIQGDFSSDETYQKLNTLVNNQKIDCV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G++ D +++ L E A FA LN G F+ K FQG +++ L L+++
Sbjct: 119 ISDMAPNLSGNKTSDQAKSIYLLELALDFANTNLNKNGSFVAKVFQGQGSDEYLKLVRES 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KVI KP +SRA+S E +++A F+
Sbjct: 179 FNKVIQFKPKSSRAKSREFYVIATEFK 205
>gi|196016828|ref|XP_002118264.1| hypothetical protein TRIADDRAFT_62287 [Trichoplax adhaerens]
gi|190579165|gb|EDV19267.1| hypothetical protein TRIADDRAFT_62287 [Trichoplax adhaerens]
Length = 313
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KLLQI+E+ I + R VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRQAKEEGWRARSAFKLLQIDEEFTIFKGVTRAVDLCAAPGSWSQ 57
Query: 84 VAARITGSNAN-------NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
V ++ + N ++VA+D+ M P+ GV + D + + I G
Sbjct: 58 VLSKKLRNQENLSEAEQSKVKIVAVDLQAMAPLDGVIQIQGDITSVSTANRIIDYFEGEK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+ D A G +D L AA +L GG F+ K F+G + +
Sbjct: 118 ADLVVCDGAPDVTGQHDLDEYFQAQLLLAALNITNHVLKSGGTFIAKIFRGKDVSLLYSQ 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L+ F V KP +SR S+E F++ + +
Sbjct: 178 LRVFFPNVTISKPRSSRNSSIEAFVVCRNY 207
>gi|254298037|ref|ZP_04965490.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 406e]
gi|157807431|gb|EDO84601.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 406e]
Length = 210
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI- 88
++ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 1 MHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYARNKL 60
Query: 89 --------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
+ ++A+D+L MEP+ V F + DF + + + + G DLV
Sbjct: 61 AQGKRRDAVREGGIDGTIIALDMLPMEPVADVHFIQGDFREESVLHQLEEVLAGRAVDLV 120
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G D R +C+ A FA L G LVK F G + I+ K
Sbjct: 121 ISDMAPNLSGVAVADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEKFKHQ 180
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F+ V KP ASR +S E F+L + ++
Sbjct: 181 FKTVAPRKPKASRDKSSETFILGRHLKQ 208
>gi|193785818|dbj|BAG51253.1| unnamed protein product [Homo sapiens]
Length = 327
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++++ Q+ Q R VDL ++PGSWSQV +R G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSRKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|225440636|ref|XP_002278921.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297740237|emb|CBI30419.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
+R D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLF 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ + +VAID+ M PI GV + D + + E + + G DLV+
Sbjct: 65 LPAKLSPASRDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAELVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L A +L GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKKGGKFIAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F + + +
Sbjct: 185 PIVTFAKPKSSRNSSIEAFAVCENY 209
>gi|85712945|ref|ZP_01043985.1| 23S rRNA methylase [Idiomarina baltica OS145]
gi|85693251|gb|EAQ31209.1| 23S rRNA methylase [Idiomarina baltica OS145]
Length = 208
Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 119/208 (57%), Gaps = 4/208 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS+ WL H +DP+VQ+AQ G R+R+ +K+ +I ++ ++++ + +VDLG++PG
Sbjct: 3 KKRSVSSQRWLKEHFDDPFVQKAQKRGLRSRAVFKIEEIQQRDKLIKKGQTVVDLGAAPG 62
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
WSQ A + +V+A DIL M+PI GV F + DF + + + IGG D+
Sbjct: 63 GWSQYVADYFN---GDGQVIACDILSMDPIAGVDFLQGDFREQAVLDALLSRIGGKNVDV 119
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA G+ +D R M L E A ++L GG F VK F G + L ++
Sbjct: 120 VLSDMAPNMSGNDNVDQPRAMYLVELALDMCHQVLKPGGSFAVKVFHGQGFEEFLKDVRA 179
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP +SR+ S E++L+A ++
Sbjct: 180 AFKTVKTRKPSSSRSRSREVYLVATDYK 207
>gi|301791140|ref|XP_002930562.1| PREDICTED: putative ribosomal RNA methyltransferase 2-like
[Ailuropoda melanoleuca]
Length = 246
Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 80/225 (35%), Positives = 126/225 (56%), Gaps = 7/225 (3%)
Query: 10 RRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
RR T ++ G+ WL RH+ DP+V+ A++E +R RSA+KLL+++E+H IL+
Sbjct: 15 RRFHTAGSHSKGRTGAEHLWLTRHLKDPFVKAAKMESYRCRSAFKLLEVDERHGILRPGL 74
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKF-DFLDLD 123
R++D G++PG+WSQVA + + + R V+ +D+L + P+ G F D D
Sbjct: 75 RVLDCGAAPGAWSQVAVQRVNAAGTDPRAPVGFVLGVDLLHISPLEGATFLCPADVTDPR 134
Query: 124 SWEFIRQAIGGNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
+ + I++ + G V+ SDMA G R +DH R + LC + A +L+ GG FL K
Sbjct: 135 TLQRIQELLPGGRADVILSDMAPNATGIRSLDHDRLIGLCSSLLDTAPHVLHPGGTFLCK 194
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ G + L FQ VKP ASR ES E++LLA +++
Sbjct: 195 MWAGSQSLAYQKRLTGQFQNTRTVKPRASRKESSEVYLLATQYQR 239
>gi|89365951|gb|AAI14515.1| FtsJ homolog 2 (E. coli) [Homo sapiens]
Length = 246
Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 123/213 (57%), Gaps = 7/213 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
++ G+ WL RH+ DP+V+ A++E +R RSA+KLL++NE+HQIL+ + R++D G++PG
Sbjct: 25 KNRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEVNERHQILRPSLRVLDCGAAPG 84
Query: 80 SWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQAIG 133
+WSQVA + ++ V+ +D+L + P+ G F D D + + I + +
Sbjct: 85 AWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLP 144
Query: 134 GNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G V+ SDMA G R +DH R +SLC ++L GG FL KT+ G + +
Sbjct: 145 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRL 204
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L + FQ V +KP ASR ES E++ LA +
Sbjct: 205 QRRLTEEFQNVRIIKPEASRKESSEVYFLATQY 237
>gi|320162925|gb|EFW39824.1| cell division protein [Capsaspora owczarzaki ATCC 30864]
Length = 327
Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ EGWRARSA+KLLQ++E+ Q+ + RR VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRLAKEEGWRARSAFKLLQLDEEFQLFLNVRRAVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT---------------RVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
V ++ + ++VA+D+ M P+ GV + D + + I
Sbjct: 58 VLSKKLDAVQCPVAVPMESLPAHCQIPRKIVAVDLQAMAPLPGVIQIQGDITKESTAQQI 117
Query: 129 RQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
G DLV+ D A G ID L AA +L G F+ K F+G
Sbjct: 118 VAHFEGELADLVVCDGAPDVTGLHDIDEYIQAQLILAALNITTHVLRPDGVFVAKIFRGK 177
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ + LK F+ V KP +SR S+E F++ +G+
Sbjct: 178 DVSLLYSQLKLFFRNVTCSKPRSSRNSSIEAFVVCRGY 215
>gi|326513676|dbj|BAJ87857.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 317
Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KL+QI+++ I R VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLMQIDQEFNIFHGVERAVDLCAAPGSWSQVLSRNLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
G + +VAID+ M PI GV + D + + E + + G DLV+
Sbjct: 65 LPAKLSSDGKDGGLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L +GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+V KP +SR S+E F + + +
Sbjct: 185 SQVTFAKPKSSRNSSIEAFAVCENY 209
>gi|308467426|ref|XP_003095961.1| hypothetical protein CRE_06935 [Caenorhabditis remanei]
gi|308244230|gb|EFO88182.1| hypothetical protein CRE_06935 [Caenorhabditis remanei]
Length = 331
Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 1/196 (0%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
+R D Y + A+ WRARSA+KL+QI+++ QIL+ RR VDL ++PGSWSQV ++
Sbjct: 5 SRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLSKRLF 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
++VAID+ M PI GV + D +D+ + + G+ D+V+ D A G
Sbjct: 65 EEDKEAKIVAIDLQPMAPIPGVIQLQGDITSVDTANQVIEHFSGDKSDIVICDGAPDVTG 124
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA +L GG+FL K F+ ++ + +K++F+KV KP
Sbjct: 125 IHSLDEFMQAELILAAFNITSHVLRPGGNFLAKIFRSRNSSLLYAQMKRYFKKVYLAKPR 184
Query: 210 ASRAESVEMFLLAKGF 225
+SR S E F+L +
Sbjct: 185 SSRQSSCEAFVLCLDY 200
>gi|170030475|ref|XP_001843114.1| ribosomal RNA large subunit methyltransferase J [Culex
quinquefasciatus]
gi|167867355|gb|EDS30738.1| ribosomal RNA large subunit methyltransferase J [Culex
quinquefasciatus]
Length = 239
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 73/213 (34%), Positives = 122/213 (57%), Gaps = 7/213 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + SS++WL R +NDP+V+RA++ +R RSA+KLL+I++K+ I++ ++D G++PG
Sbjct: 22 KGKKKSSQEWLTRQLNDPFVERAKMANYRCRSAFKLLEIDQKYNIIKPGFTVIDCGAAPG 81
Query: 80 SWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFF-KFDFLDLDSWEFIRQ-AI 132
SWSQ+A + + V+ +D+L + PI DF +S + IR
Sbjct: 82 SWSQIAVKQSNADGAAPGKPKGTVIGVDLLQIYPIAHATTLGNTDFTRTESQDKIRSLLG 141
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D VLSDMA G R +D ++LC + FA+ M + L+K + G +
Sbjct: 142 EKRIDCVLSDMAPNATGVRSLDQENIITLCYSVLRFAILMSSPNASLLMKVWDNGEVPAL 201
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+++++Q+V +KP ASRA+S E F+LA+GF
Sbjct: 202 EKNIQRYYQQVKRIKPRASRADSAENFVLARGF 234
>gi|303243749|ref|ZP_07330090.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanothermococcus
okinawensis IH1]
gi|302485991|gb|EFL48914.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanothermococcus
okinawensis IH1]
Length = 261
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
+ W+ + D Y + A+ +R+R++YKLLQ+NEK I++ N +VDLG +PG W Q
Sbjct: 3 KKDKRWVLQRKRDFYYKLAKKNKYRSRASYKLLQLNEKFNIIKENDVVVDLGCAPGGWLQ 62
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM 143
A I G V + ++ V K D ++ E + + + D V+ D
Sbjct: 63 AARDIVGEGGFVAGVDLQGVKPLKY-ENVIAIKGDMTKKETIEKLMKLLPSKADAVICDA 121
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G + DH R++ L A A ++L G+F+VK FQG ND + LLK +F+KV
Sbjct: 122 SPNISGVWERDHTRSLELTTIALITATKLLKKDGNFVVKVFQGSLFNDYVALLKNYFKKV 181
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP ASR S E++++ K F
Sbjct: 182 QTTKPKASRDVSAEVYVVGKKF 203
>gi|225716246|gb|ACO13969.1| ribosomal RNA methyltransferase 2 [Esox lucius]
Length = 242
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 66/215 (30%), Positives = 120/215 (55%), Gaps = 7/215 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + + W+ R +NDP+V+ A + +R RSA+KLL+I++K+++L+ ++D G++PG
Sbjct: 26 KGKSTADQRWIVRQLNDPFVEAAHVHNYRCRSAFKLLEIDDKYKLLKPGFSVIDCGAAPG 85
Query: 80 SWSQVAARITGSNANN-----TRVVAIDILDMEPILGVKFFKFDFLDLDS--WEFIRQAI 132
+WSQVA + S + VV ID+ + P+ G F + + ++
Sbjct: 86 AWSQVAVQRVNSTGSYEEFPRGTVVGIDLQRIAPLDGAHFLSNCDITDPVTHAKLLKLLP 145
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
GG ++LSDMA G +++DH + +++ + A ++L GG + K + G + +
Sbjct: 146 GGQAHIILSDMAPNASGFKEMDHEKLITMSLSLMDLADKVLRPGGSLICKYWDGALASVL 205
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L F++V +KP ASR ES E+FLLA+ +R+
Sbjct: 206 QARLSAVFREVRTIKPKASRKESSELFLLARSYRE 240
>gi|332027855|gb|EGI67913.1| Putative ribosomal RNA methyltransferase [Acromyrmex echinatior]
Length = 246
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 124/213 (58%), Gaps = 6/213 (2%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
++ + SS+ WL R + DPYV++A+ E +R RSA+KLL+INE+ +IL +VD G++PG
Sbjct: 29 KNKKHSSQLWLERQLRDPYVEKAKQEKYRCRSAFKLLEINERFKILSPGLTVVDCGAAPG 88
Query: 80 SWSQVAARITGSNANN----TRVVAIDILDMEPILGVKFF-KFDFLDLDSWEFIRQAIGG 134
SW+QVA +T + RV A+D L P+ G DF ++ + E + + + G
Sbjct: 89 SWTQVATNLTNAGGKKEGPVGRVYAVDKLPFYPVEGATVLGNMDFTNIKTQETLSKLLQG 148
Query: 135 NP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDIL 193
+ D+VLSDMA G R+IDH M L AA FAL++ + F+VK + GG T
Sbjct: 149 DKVDVVLSDMAPNASGVREIDHDNIMLLAYAALRFALQISKVQSTFVVKIWDGGKTQQFE 208
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L K + V ++P A+R ES E F LA+ F+
Sbjct: 209 QNLLKFYNSVRAIRPDATRDESTETFFLARRFK 241
>gi|300123162|emb|CBK24435.2| unnamed protein product [Blastocystis hominis]
Length = 288
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 2/198 (1%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR-I 88
++ D Y ++A+ G+RARSA+KLLQINE++ I R VDL ++PGSWSQV +R +
Sbjct: 4 YSKDKRDIYYRKAKEVGYRARSAFKLLQINEEYHIFDQVSRAVDLCAAPGSWSQVLSREL 63
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPT 147
+ ++VA+D+ +M PI GV + D + + I G LV+ D A
Sbjct: 64 YKPEKKDVKIVAVDLQEMAPIEGVIQIQGDITSKKTADEIINHFEGKKAQLVICDGAPDV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G +D L +A ++L GG F+ K F+G + L+ F +V K
Sbjct: 124 TGLHDMDVYVQSQLLLSALSITAQVLCDGGTFIAKIFRGRDVTLLFAQLRVFFSEVACCK 183
Query: 208 PVASRAESVEMFLLAKGF 225
P +SR S+E F++ + F
Sbjct: 184 PKSSRNSSMEAFVVCRDF 201
>gi|222423600|dbj|BAH19769.1| AT5G01230 [Arabidopsis thaliana]
Length = 309
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
+R D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ + +VAID+ M PI GV + D + + E + + G DLV+
Sbjct: 65 LPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L A +L GG F+ K F+G T+ + C LK F
Sbjct: 125 CDDAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F + + +
Sbjct: 185 PTVTFAKPKSSRNSSIEAFAVCENY 209
>gi|294901600|ref|XP_002777432.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
gi|239885068|gb|EER09248.1| cell division protein, putative [Perkinsus marinus ATCC 50983]
Length = 297
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 105/205 (51%), Gaps = 8/205 (3%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN-RRIVDLGSSPGSWSQVAARI 88
L++ D Y + A+ EG+RARSAYKLLQ++E+ IL + R+VDL ++PGSWSQV ++
Sbjct: 4 LSKDKRDIYYRLAKEEGYRARSAYKLLQVDEQFHILTDDLERVVDLCAAPGSWSQVLSKK 63
Query: 89 TGSN------ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLS 141
N +V++D+ +M PI V + D + + + GG DLV+
Sbjct: 64 LCENLRGSDDRKKPLIVSVDLQEMAPIPDVTCIQGDITSEKTVKEVLDCFGGQLSDLVVC 123
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA +L GG F+ K F+G + + + F+
Sbjct: 124 DGAPDVTGMHDMDEYVQFQLLLAALNITTLLLKPGGSFVAKVFRGENVDLLYAKMYVFFE 183
Query: 202 KVIHVKPVASRAESVEMFLLAKGFR 226
V KP +SR SVE F++ K FR
Sbjct: 184 CVWVAKPRSSRNSSVESFIVCKNFR 208
>gi|328783221|ref|XP_003250253.1| PREDICTED: putative ribosomal RNA methyltransferase CG11447-like
[Apis mellifera]
Length = 251
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 120/213 (56%), Gaps = 6/213 (2%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + SS+ WL R I DPYV+ A+ E +R RSAYKLL+INE+ +IL+ + ++D G++PG
Sbjct: 29 KGKKHSSQLWLTRQIEDPYVELAKRENYRCRSAYKLLEINERFKILEPGKIVIDCGAAPG 88
Query: 80 SWSQVAARITGSNANN----TRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGG 134
SW+QVA ++T +NA V+ ID + PI G + I + G
Sbjct: 89 SWTQVAVKLTNANAKQKSAIGTVLGIDKQPIYPIEGATLLSGMDFMAATSQNKILNILNG 148
Query: 135 NPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDIL 193
V SDMA G R +DH M L +A FAL++++I G F+ K + G + +
Sbjct: 149 RKVNVFLSDMAPNASGIRDLDHENIMKLVYSALKFALQIIHINGIFVCKLWDGKKSLQLE 208
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + F+ V +++P A+R ES E FL+A+ F+
Sbjct: 209 KDLTRFFKYVKNIRPKATRDESTEKFLIAREFK 241
>gi|30679168|ref|NP_851026.1| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
gi|26983822|gb|AAN86163.1| putative cell division protein [Arabidopsis thaliana]
gi|332002931|gb|AED90314.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
Length = 309
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
+R D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ + +VAID+ M PI GV + D + + E + + G DLV+
Sbjct: 65 LPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L A +L GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F + + +
Sbjct: 185 PTVTFAKPKSSRNSSIEAFAVCENY 209
>gi|71400687|ref|XP_803129.1| FtsJ cell division protein [Trypanosoma cruzi strain CL Brener]
gi|70865797|gb|EAN81683.1| FtsJ cell division protein, putative [Trypanosoma cruzi]
Length = 651
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/215 (33%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSA+KL+Q+N K+ L +R +V
Sbjct: 1 MGTKSKKKAKT----------RLDAYYRLAKDQGFRARSAFKLIQLNRKYDFLAKSRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DL ++PG W QVAA+ +++V +D++ + PI GVK F D D + + I
Sbjct: 51 DLCAAPGGWCQVAAKHMPVG---SKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYF 107
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
P D V+ D A G D +L A A ML G F+ K F+ +
Sbjct: 108 KKEPVDCVIHDGAPNVGGVWSRDLFEQNALVLHAAKMAASMLKPSGWFVTKVFRSQDFHK 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ +LK+ F KV KP+ASR ES E+F++ GF+
Sbjct: 168 LMWVLKQLFDKVEATKPLASRMESAEIFVVCAGFK 202
>gi|90075218|dbj|BAE87289.1| unnamed protein product [Macaca fascicularis]
Length = 299
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++++ Q+ Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|29029589|ref|NP_803183.1| putative ribosomal RNA methyltransferase 1 isoform b [Homo sapiens]
gi|29029591|ref|NP_803188.1| putative ribosomal RNA methyltransferase 1 isoform b [Homo sapiens]
gi|3511153|gb|AAC33734.1| cell division protein [Homo sapiens]
gi|119571169|gb|EAW50784.1| FtsJ homolog 1 (E. coli), isoform CRA_b [Homo sapiens]
Length = 327
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++++ Q+ Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|7110661|ref|NP_036412.1| putative ribosomal RNA methyltransferase 1 isoform a [Homo sapiens]
gi|12643879|sp|Q9UET6|RRMJ1_HUMAN RecName: Full=Putative ribosomal RNA methyltransferase 1; AltName:
Full=Protein ftsJ homolog 1; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase
gi|3334739|emb|CAA06749.1| JM23 [Homo sapiens]
gi|23270836|gb|AAH23584.1| FtsJ homolog 1 (E. coli) [Homo sapiens]
gi|119571167|gb|EAW50782.1| FtsJ homolog 1 (E. coli), isoform CRA_a [Homo sapiens]
gi|119571168|gb|EAW50783.1| FtsJ homolog 1 (E. coli), isoform CRA_a [Homo sapiens]
gi|189054765|dbj|BAG37587.1| unnamed protein product [Homo sapiens]
gi|307686265|dbj|BAJ21063.1| FtsJ homolog 1 [synthetic construct]
gi|312151394|gb|ADQ32209.1| FtsJ homolog 1 (E. coli) [synthetic construct]
Length = 329
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++++ Q+ Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|322794006|gb|EFZ17244.1| hypothetical protein SINV_09000 [Solenopsis invicta]
Length = 246
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 6/213 (2%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + SS+ WL R + DPYV++A+ E +R RSA+KLL+INE+ +I +VD G++PG
Sbjct: 29 KGKKHSSQLWLARQLRDPYVEKAKQEKYRCRSAFKLLEINERFKIFSPGLTVVDCGAAPG 88
Query: 80 SWSQVAARITGSNAN----NTRVVAIDILDMEPILGVKFF-KFDFLDLDSWEFIRQAIGG 134
SW+QVA +T ++ RV AID L P+ G DF + E + + + G
Sbjct: 89 SWTQVATNLTNAHGKKKGRIGRVYAIDKLPFYPVEGATVLGNMDFTSPKTQETLIELLQG 148
Query: 135 NP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDIL 193
+ D+VLSDMA G +++DH + L AA FAL++ I G ++K + GG
Sbjct: 149 DKVDVVLSDMAPNATGMKEMDHDNIILLAYAALRFALQISKINGTLVIKVWDGGKAQQFE 208
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L K + + ++P A+R ES E F LA+GF+
Sbjct: 209 QNLSKFYNSIKIIRPDATRDESTEKFFLARGFK 241
>gi|296080816|ref|NP_001171683.1| FtsJ homolog 2 [Sus scrofa]
gi|197281890|gb|ACH57152.1| FtsJ-like protein 2 [Sus scrofa]
Length = 245
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 124/214 (57%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + WL RH+ DP+V+ +++E +R RSA+KLL++NE+H+IL+ R++D G++PG
Sbjct: 25 KGRTAAEHLWLARHLKDPFVKASKVESYRCRSAFKLLEMNERHRILRPGLRVLDCGAAPG 84
Query: 80 SWSQVAARITGSNANN-----TRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQAIG 133
+WSQVA + + + V+ +D+L + P+ G F D D +++ IR +
Sbjct: 85 AWSQVAVQRVNAAGTDATAPVGFVLGVDLLHILPLEGATFLCPADVTDPRTFQRIRDLLP 144
Query: 134 GNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G V+ SDMA G R +DH R +SLC + A ++L+ G FL K + G ++ +
Sbjct: 145 GGKADVILSDMAPNATGIRGLDHDRLISLCLSLLDMAPDVLHPRGAFLCKIWAGSQSHRL 204
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + FQ VKP ASR ES E++LLA ++
Sbjct: 205 QKRLTEAFQNTRTVKPAASRKESSELYLLATRYQ 238
>gi|320581605|gb|EFW95825.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Pichia angusta DL-1]
Length = 299
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 111/205 (54%), Gaps = 7/205 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSAYKLLQ+NE+ + + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDVYYRKAKEEGWRARSAYKLLQLNEQFGLFNNIHRVVDLCAAPGSWSQ 57
Query: 84 VAAR-ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
V +R I + ++ ++VA+D+ M PI V + D D + + I GG D V S
Sbjct: 58 VLSREIFKNERSDAQIVAVDLQPMAPIDDVVTLQADITDPRTLDKILHIFGGEKADFVCS 117
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L A A +L GG F+ K F+G + + L F+
Sbjct: 118 DGAPDVTGLHDLDEYIQAQLVLCALRLATCLLKEGGTFVAKIFRGRDIDLLYSQLGFLFE 177
Query: 202 KVIHVKPVASRAESVEMFLLAKGFR 226
KV+ KP ASR S+E F++ G+R
Sbjct: 178 KVVCAKPRASRGTSLESFIVCIGYR 202
>gi|254468491|ref|ZP_05081897.1| ribosomal RNA large subunit methyltransferase J [beta
proteobacterium KB13]
gi|207087301|gb|EDZ64584.1| ribosomal RNA large subunit methyltransferase J [beta
proteobacterium KB13]
Length = 205
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 73/207 (35%), Positives = 119/207 (57%), Gaps = 4/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
+ ++W+ H++D +V+RAQ +G+R+R+AYK +++N+K+ +++ N RIVDLGS+PGS
Sbjct: 2 KKTRTKKNWIKEHLSDEFVKRAQKDGFRSRAAYKFIEMNDKYHLIRPNDRIVDLGSAPGS 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
WSQ A+ + +N ++ AID+L M+ + F + DF +L + + + + DLV
Sbjct: 62 WSQAASSLISNN---GKIFAIDLLPMDDVKNTTFIQGDFRELSILQKLEELLENTAVDLV 118
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G + D L + + FA + L G F+VKTF G + + L+
Sbjct: 119 ISDMAPNISGIKSRDQAMINDLNDLSLKFASDWLKPKGHFMVKTFMGSGFEEYVKKLRSL 178
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV KP +SR S E FL+ R
Sbjct: 179 FNKVKIEKPDSSRDRSAEFFLIGLEKR 205
>gi|118097774|ref|XP_414772.2| PREDICTED: similar to cell division protein FtsJ [Gallus gallus]
Length = 244
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 7/214 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + WL R DP+V+ A+ + +R RSA+KLL+I++K IL+ ++D G++PG
Sbjct: 29 KKKTATENWWLERQWRDPFVKAAKQQHYRCRSAFKLLEIDDKLHILRPGLSVLDCGAAPG 88
Query: 80 SWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKFDFLDLD--SWEFIRQAI 132
+WSQVA A V+ +D+L + P+ G F +
Sbjct: 89 AWSQVAVERVNALGTDPAAPTGFVIGVDLLRISPLEGAVFLSQADITDPGTQRAIQNLLP 148
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D++LSDMA G +++DH + +SLC + +L G L K + G + +
Sbjct: 149 AEKVDVILSDMAPNATGIKELDHQKLISLCLGLVNLSQSILKPKGTMLCKFWDGHESRVL 208
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LK+ FQ V +KP ASR +S E + LA+ ++
Sbjct: 209 QNKLKEQFQDVRTIKPQASRKDSSESYYLARLYK 242
>gi|19115658|ref|NP_594746.1| tRNA 2'-O-ribose methyltransferase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|9910977|sp|O36015|YEK3_SCHPO RecName: Full=Putative ribosomal RNA methyltransferase C4F10.03c;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|2656003|emb|CAB11724.1| tRNA 2'-O-ribose methyltransferase (predicted) [Schizosaccharomyces
pombe]
Length = 285
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/209 (35%), Positives = 113/209 (54%), Gaps = 13/209 (6%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ +GWRARSA+KLLQ+NE+ + + +R+VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDAYYRLAKEQGWRARSAFKLLQLNEQFNLFEGAKRVVDLCAAPGSWSQV 58
Query: 85 AARITGSNANNTR-------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
+R N + + +VA+D+ M PI GV + D ++ I G P
Sbjct: 59 LSRELLKNIDTSIAADEKPMIVAVDLQPMAPIDGVCTLQLDITHPNTLSIILSHFGNEPA 118
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLV+SD A G +D + AA A+ +L GG F+ K F+G + + L
Sbjct: 119 DLVVSDGAPDVTGLHDLDEYIQAQILLAAFNLAVCVLKPGGKFVAKIFRGRDVSLLYSQL 178
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ F+KV KP +SRA S+E F++ + F
Sbjct: 179 RLMFRKVSCAKPRSSRASSIESFVVCEDF 207
>gi|123446753|ref|XP_001312124.1| cell division protein [Trichomonas vaginalis G3]
gi|121893960|gb|EAX99194.1| cell division protein, putative [Trichomonas vaginalis G3]
Length = 244
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 2/193 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D + + A+ EGWRARSA+KL+Q+ + ++ + R+VDL ++PGSWSQV A+ S
Sbjct: 8 RDTFYRAAKQEGWRARSAFKLIQVADHFRLFDNVTRVVDLCAAPGSWSQVCAQRL-SKVP 66
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKI 153
N+ +VA+D+ M PI GV + D ++ + + A+ G DLV+SD A G +
Sbjct: 67 NSAIVAVDLQPMAPIPGVIQIRGDITSKETAQQVIDAMNGKKADLVISDGAPDVTGLHDL 126
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
D L +A A ML GG F+ K F G D+ L F+ V +KP ASR
Sbjct: 127 DEYMQSQLVFSAFNIACFMLREGGTFMAKIFTGRDIQDLYSSLSPFFETVTAMKPRASRV 186
Query: 214 ESVEMFLLAKGFR 226
S+E F++ +GF+
Sbjct: 187 ASLESFVVCQGFK 199
>gi|118602395|ref|YP_903610.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
gi|143461559|sp|A1AW32|RLME_RUTMC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|118567334|gb|ABL02139.1| 23S rRNA Um-2552 2'-O-methyltransferase [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 207
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 122/206 (59%), Gaps = 4/206 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+GSS W++ HIND +V++AQ G+R+RS YKL+++ K + ++ +++DLG++PG W
Sbjct: 3 KKGSSGRWMSEHINDEFVKKAQKSGYRSRSVYKLIEVINKDKFIKLGDKVLDLGAAPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVL 140
SQVA +I G + +V+A DILD++PI GV F + DF +E + + D+VL
Sbjct: 63 SQVAIKIVG---KSGQVIASDILDIKPIDGVDFLRGDFTKDSVYETLLDITMSKKVDVVL 119
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G ID ++M LCE A A++ L G F VK FQG N+ + L + F
Sbjct: 120 SDMAPNMSGQSSIDIPKSMYLCELALDMAIKTLTPLGYFFVKVFQGNGFNEFVKLCRSSF 179
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
V KP AS+ S E++LL +
Sbjct: 180 SFVTIRKPKASKLRSKEVYLLTSKLK 205
>gi|297806107|ref|XP_002870937.1| hypothetical protein ARALYDRAFT_486954 [Arabidopsis lyrata subsp.
lyrata]
gi|297316774|gb|EFH47196.1| hypothetical protein ARALYDRAFT_486954 [Arabidopsis lyrata subsp.
lyrata]
Length = 309
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 104/205 (50%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
+R D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+VAID+ M PI GV + D + + E + + G DLV+
Sbjct: 65 LPAKSSAESKEGGLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L A +L GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F + + +
Sbjct: 185 PTVTFAKPKSSRNSSIEAFAVCENY 209
>gi|255083873|ref|XP_002508511.1| predicted protein [Micromonas sp. RCC299]
gi|226523788|gb|ACO69769.1| predicted protein [Micromonas sp. RCC299]
Length = 327
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y ++A+ EGWRARSA+KLLQI++ IL++ + +VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDDSFDILKNVKNVVDLCAAPGSWSQVLSRRIY 64
Query: 91 --------SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL--VL 140
+ + +++AID+ M PI G+ + D + E I V+
Sbjct: 65 LPAKEKGLPDEDMPKLIAIDLQPMAPIEGITTIQGDMTSMAKVEEILAHFTDGRKADLVI 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G +D L A +L GG ++ K F+G + LK F
Sbjct: 125 SDGAPDVTGLHDMDEFMQAQLILAGLTVCTHILADGGTYVAKIFRGKDCALLYSQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
++V KP +SR S+E F++ + +
Sbjct: 185 KQVTCAKPKSSRNSSIEAFVVCQEY 209
>gi|87162879|gb|ABD28674.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Medicago truncatula]
Length = 316
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
+R D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ N +VAID+ M PI GV + D + + E + + G +LV+
Sbjct: 65 LPAKLAPDAKDENLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKANLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L A +L GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F + + +
Sbjct: 185 PVVTFAKPKSSRNSSIEAFAVCENY 209
>gi|146419553|ref|XP_001485738.1| hypothetical protein PGUG_01409 [Meyerozyma guilliermondii ATCC
6260]
Length = 293
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 107/206 (51%), Gaps = 8/206 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y +RA+ EGWRARSA+KLLQ++E+ + +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDLYYRRAKEEGWRARSAFKLLQLDEEFGLFSGVKRVVDLCAAPGSWSQ 57
Query: 84 VAARIT--GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
V +R + ++VA+D+ M PI GV + D + + I GG P D V
Sbjct: 58 VLSREIYKNLKGEDAKIVAVDLQPMTPIDGVITLQADITHPKTLQRILDIFGGEPADFVC 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G +D L A +L GG F+ K F+G + + L F
Sbjct: 118 SDGAPDVTGLHDLDEYIQAQLVLCALQLTTCVLKEGGTFVAKIFRGRDIDLLYSQLGHLF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
++V+ KP A R S+E F++ G++
Sbjct: 178 ERVVCAKPRALRGTSLEAFIVCIGYK 203
>gi|281208196|gb|EFA82374.1| rRNA methyltransferase [Polysphondylium pallidum PN500]
Length = 274
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 8/206 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KLLQI++ H I +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRKAKEEGWRARSAFKLLQIDDDHNIFGGVKRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNA--NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVL 140
V +R + + ++VA+DI +M P+ GV K D L + I G+ DLV+
Sbjct: 58 VLSRRIYGDGSDPDVKIVAVDIQEMAPLKGVLQIKGDITKLTTVNQIISHFDGSLADLVV 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G ID L +A +L GG F+ K F+G + +K F
Sbjct: 118 SDGAPDVTGLHDIDFYGQAQLILSAFNITTHVLCRGGTFVAKMFKGNDMTLMYNQMKLFF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+KV VKP +SR S+E F+L + ++
Sbjct: 178 EKVSFVKPKSSRDSSLENFILCQNYQ 203
>gi|123977189|ref|XP_001330767.1| cell division protein [Trichomonas vaginalis G3]
gi|121912578|gb|EAY17398.1| cell division protein, putative [Trichomonas vaginalis G3]
Length = 244
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 2/193 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D + + A+ EGWRARSA+KL+Q+ + ++ + R+VDL ++PGSWSQV A+ S
Sbjct: 8 RDTFYRAAKQEGWRARSAFKLIQVADHFRLFDNVTRVVDLCAAPGSWSQVCAQKL-SKVP 66
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKI 153
N+ +VA+D+ M PI GV + D ++ + + A+ G DLV+SD A G +
Sbjct: 67 NSAIVAVDLQPMAPIPGVIQIRGDITSKETAQQVIDAMNGKKADLVISDGAPDVTGLHDL 126
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
D L +A A ML GG F+ K F G D+ L F+ V +KP ASR
Sbjct: 127 DEYMQSQLVFSAFNIACFMLREGGTFMAKIFTGRDIQDLYSSLSPFFETVTAMKPRASRV 186
Query: 214 ESVEMFLLAKGFR 226
S+E F++ +GFR
Sbjct: 187 ASLESFVVCQGFR 199
>gi|50311753|ref|XP_455905.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645041|emb|CAG98613.1| KLLA0F18414p [Kluyveromyces lactis]
Length = 301
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/206 (33%), Positives = 109/206 (52%), Gaps = 9/206 (4%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ +G+RARSA+KLLQ+++ LQ R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDLYYRKAKEQGYRARSAFKLLQLDDDFHFLQQAVRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT---RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
V +R +++ ++VA+D+ M PI V + D + + I + G D +
Sbjct: 58 VLSRRLFPQSSDNSDRKIVAVDLQPMSPIDNVITLQADITHPKTLQTITELFEGKKADFI 117
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
SD A G +D L +A + +L GG+F+ K F+G + + L
Sbjct: 118 CSDGAPDVTGLHDLDEYVQQQLILSALQLSTCLLRKGGNFVAKIFRGRDIDMLYSQLGYL 177
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KVI KP +SR S+E F++ G+
Sbjct: 178 FEKVICAKPRSSRGTSLESFIVCLGY 203
>gi|226500760|ref|NP_001152207.1| ribosomal RNA methyltransferase 1 [Zea mays]
gi|195653845|gb|ACG46390.1| ribosomal RNA methyltransferase 1 [Zea mays]
gi|224035109|gb|ACN36630.1| unknown [Zea mays]
Length = 318
Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KLLQI+++ I + +VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKHVVDLCAAPGSWSQVLSRNLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ +VAID+ M PI GV + D + + + + + G DLV+
Sbjct: 65 VPAKQSSDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTADVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L +GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAALAIVTHVLKVGGKFVAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+V KP +SR S+E F + + +
Sbjct: 185 SQVTFAKPKSSRNSSIEAFAVCENY 209
>gi|313242586|emb|CBY34717.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ +GWRARSA+KLLQI+E+ + ++ ++VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIYYRLAKEQGWRARSAFKLLQIDERFDLFKNVTKVVDLCAAPGSWSQVLSKKLK 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIG 149
N ++V++D+ M PI V + D ++ + I GG DLV+ D A G
Sbjct: 65 DKEN-AKIVSVDLQPMAPIDNVICIQGDITSQETSDEIIAHFDGGKADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA + +L+ GG F+ K F+G + I + F+ V KP
Sbjct: 124 LHDLDEYIQSQLILAAFNISTFVLSPGGTFVSKIFRGRDCDLIFHQFQMFFKNVYLAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SRA SVE F++A F
Sbjct: 184 SSRASSVEAFVVAIDF 199
>gi|281349747|gb|EFB25331.1| hypothetical protein PANDA_021048 [Ailuropoda melanoleuca]
Length = 235
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 80/223 (35%), Positives = 124/223 (55%), Gaps = 7/223 (3%)
Query: 10 RRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR 69
RR T ++ G+ WL RH+ DP+V+ A++E +R RSA+KLL+++E+H IL+
Sbjct: 13 RRFHTAGSHSKGRTGAEHLWLTRHLKDPFVKAAKMESYRCRSAFKLLEVDERHGILRPGL 72
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKF-DFLDLD 123
R++D G++PG+WSQVA + + + R V+ +D+L + P+ G F D D
Sbjct: 73 RVLDCGAAPGAWSQVAVQRVNAAGTDPRAPVGFVLGVDLLHISPLEGATFLCPADVTDPR 132
Query: 124 SWEFIRQAIGGNPDLVL-SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
+ + I++ + G V+ SDMA G R +DH R + LC + A +L+ GG FL K
Sbjct: 133 TLQRIQELLPGGRADVILSDMAPNATGIRSLDHDRLIGLCSSLLDTAPHVLHPGGTFLCK 192
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ G + L FQ VKP ASR ES E++LLA +
Sbjct: 193 MWAGSQSLAYQKRLTGQFQNTRTVKPRASRKESSEVYLLATQY 235
>gi|116784269|gb|ABK23279.1| unknown [Picea sitchensis]
Length = 344
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ +VAID+ M I GV + D + E + + G DLV+
Sbjct: 65 LPAKAAAQSRDEELPLIVAIDLQPMASIEGVIQVQGDITSARTAEVVIKHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L +GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRVGGKFIAKIFRGKDTSLLYCQLKMFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F + + +
Sbjct: 185 STVTFAKPKSSRNSSIEAFAVCENY 209
>gi|324513843|gb|ADY45670.1| Ribosomal RNA methyltransferase [Ascaris suum]
Length = 370
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 67/202 (33%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KL+QI+++ I + R VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIYYRLAKEEGWRARSAFKLMQIDDEFNIFEGVTRAVDLCAAPGSWSQVLSKRLY 64
Query: 91 SNANN------TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDM 143
+ R+VA+D+ M P+ GV + D + + E I G+ DLV+ D
Sbjct: 65 FGEKDEQKRSEVRIVAVDLQPMSPLPGVIQLQGDITESSTAESIISHFEGSKADLVVCDG 124
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
A G +D L AA +L G F+ K F+ + + LK F++V
Sbjct: 125 APDVTGLHSLDEYMQSQLILAALNITTFVLKESGTFIAKIFRAKNVSLLYAQLKFFFEEV 184
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP +SR S E F++ K F
Sbjct: 185 YCAKPRSSRQSSCEAFVVCKRF 206
>gi|213403496|ref|XP_002172520.1| tRNA 2'-O-ribose methyltransferase [Schizosaccharomyces japonicus
yFS275]
gi|212000567|gb|EEB06227.1| tRNA 2'-O-ribose methyltransferase [Schizosaccharomyces japonicus
yFS275]
Length = 280
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 9/205 (4%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ +GWRARSA+KLLQ+NE+ + + RR+VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDAYYRMAKEQGWRARSAFKLLQLNEQFDLFKGVRRVVDLCAAPGSWSQV 58
Query: 85 AARITGSN---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+R N + +V++D+ M P+ GV + D D+ I G P DLV+
Sbjct: 59 LSRELVQNVPASERPTIVSVDLQPMAPLEGVCTLQLDITHPDTLPIILSHFGDEPADLVV 118
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G +D + AA A +L GG F+ K F+G + + L+ F
Sbjct: 119 SDGAPDVTGLHDLDEYIQAQILLAAMNLAACVLRPGGTFVAKIFRGRDVSLLYSQLRLLF 178
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+ V KP +SRA S+E F++ + F
Sbjct: 179 KHVTCAKPRSSRASSLEAFVVCQDF 203
>gi|301109152|ref|XP_002903657.1| ribosomal RNA large subunit methyltransferase J, putative
[Phytophthora infestans T30-4]
gi|262097381|gb|EEY55433.1| ribosomal RNA large subunit methyltransferase J, putative
[Phytophthora infestans T30-4]
Length = 243
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 76/212 (35%), Positives = 116/212 (54%), Gaps = 5/212 (2%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ +S W+ R +DP V++A+ EG R+R+A+KL ++N++ Q+L+ ++DLG++PG
Sbjct: 26 KGKSNASARWVRRQWSDPVVKQAKREGLRSRAAFKLRELNDRFQLLRRGDMVLDLGAAPG 85
Query: 80 SWSQVAARITGSNA----NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN 135
W+QVA T + RVVA+D+L +PI G DF + + +A+ G
Sbjct: 86 GWTQVAVEATTPKSQKTVGPPRVVAVDLLHFDPIEGASIVVGDFRQAAVRKQLAEALRGR 145
Query: 136 P-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D+VLSDMA G+ D + LC A A L GG+F K + + +
Sbjct: 146 KADVVLSDMAPSFSGNFLTDSQHQLRLCHNALKMAELYLRPGGNFATKVLRCDGSEEFRA 205
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LK F V +KP +SR ES EMFL+AKGF+
Sbjct: 206 DLKASFDVVKGMKPQSSRPESTEMFLVAKGFK 237
>gi|115469828|ref|NP_001058513.1| Os06g0704900 [Oryza sativa Japonica Group]
gi|53792764|dbj|BAD53799.1| putative FtsJ homolog 1 isoform b [Oryza sativa Japonica Group]
gi|113596553|dbj|BAF20427.1| Os06g0704900 [Oryza sativa Japonica Group]
gi|215736929|dbj|BAG95858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198852|gb|EEC81279.1| hypothetical protein OsI_24387 [Oryza sativa Indica Group]
gi|222636192|gb|EEE66324.1| hypothetical protein OsJ_22564 [Oryza sativa Japonica Group]
Length = 317
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KLLQI+++ I +R+VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKRVVDLCAAPGSWSQVLSRNLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ +VAID+ M PI GV + D + + E + + G DLV+
Sbjct: 65 VPAKQSPDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L +GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+V KP +SR S+E F + + +
Sbjct: 185 SQVTFAKPKSSRNSSIEAFAVCENY 209
>gi|291413885|ref|XP_002723197.1| PREDICTED: FtsJ homolog 1 [Oryctolagus cuniculus]
Length = 333
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 72/198 (36%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y + A+ GWRARSA+KLLQ++E+ Q+ Q R VDL ++PG WSQV ++ TG
Sbjct: 10 DVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGGWSQVLSQKTG-GQEG 68
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKID 154
+V+A+D+ M P+ GV + D L + + I Q G P DLV+ D A G +D
Sbjct: 69 GQVLAVDLQAMAPLPGVTQIQGDITQLSTAKEIIQHFQGCPADLVVCDGAPDVTGLHDVD 128
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA A +L GG F+ K F+G + L+ F V+ KP +SR
Sbjct: 129 EYMQAQLLLAALNIATHVLKPGGCFMAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNS 188
Query: 215 SVEMFLLAK------GFR 226
S+E F + + GF+
Sbjct: 189 SIEAFAVCQAYDPPEGFK 206
>gi|313237227|emb|CBY12443.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ +GWRARSA+KLLQI+E+ + ++ ++VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIYYRLAKEQGWRARSAFKLLQIDERFDLFKNVTKVVDLCAAPGSWSQVLSKKLK 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIG 149
N ++V++D+ M PI V + D ++ + I GG DLV+ D A G
Sbjct: 65 DKEN-AKIVSVDLQPMAPIDNVICIQGDITSQETSDEIITHFDGGKADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA + +L+ GG F+ K F+G + I + F+ V KP
Sbjct: 124 LHDLDEYIQSQLILAAFNISTFVLSPGGTFVSKIFRGRDCDLIFHQFQMFFKNVYLAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SRA SVE F++A F
Sbjct: 184 SSRASSVEAFVVAIDF 199
>gi|83316088|ref|XP_731073.1| cell division protein FtsJ [Plasmodium yoelii yoelii str. 17XNL]
gi|23490998|gb|EAA22638.1| FtsJ cell division protein, putative [Plasmodium yoelii yoelii]
Length = 258
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 76/226 (33%), Positives = 127/226 (56%), Gaps = 4/226 (1%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
M + + K+ N+ SS+ W+ R I D YV +A+ E +R+R+A+KL++++
Sbjct: 13 MFQSTYIRLYKEALPKIYNKKSSHSSK-WIQRQITDRYVLKAKNENYRSRAAFKLIELDN 71
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
K+ L+ N+ I+D+GS PGSW QV T + ++AID M+P+ V F K +
Sbjct: 72 KYLFLKKNKTILDIGSYPGSWCQVILERTKN--YTNEIIAIDKKIMDPLPNVHFIKAEIG 129
Query: 121 DLDSWEFIRQ-AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+ + +++ D++LSD A IG++ DHL + L + T F + +NIGG +
Sbjct: 130 KDNVDDQLKEVLKDKKIDIILSDAAVACIGNKIDDHLNSCELTLSITNFMEQYINIGGVY 189
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+VK + G T+++ LK FQ V KP ASR+ES E++L+ + F
Sbjct: 190 IVKMYLGSQTDNLKTYLKTIFQYVNTAKPKASRSESREIYLVCRNF 235
>gi|196000356|ref|XP_002110046.1| hypothetical protein TRIADDRAFT_53586 [Trichoplax adhaerens]
gi|190588170|gb|EDV28212.1| hypothetical protein TRIADDRAFT_53586 [Trichoplax adhaerens]
Length = 266
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 3/220 (1%)
Query: 8 SSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS 67
R L+ + R + SS WL R +DPYV++A G+R+RSA+KLL++++K +I +
Sbjct: 28 GRRAILSARFYARGRKSSSSRWLRRQRDDPYVKKAMELGYRSRSAFKLLEMDKKFKIFKK 87
Query: 68 NRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF 127
++D+G+SPGSW+QVA TG V + + + F DF + F
Sbjct: 88 GDIVIDIGASPGSWTQVALDKTGKRGLVMAVDIRGMKSVGEAM--IFDHMDFGVPSTHTF 145
Query: 128 IRQAIGGNPDLV-LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
I+ + + V +SDM+ G K DH M+ A F L G F+ K F G
Sbjct: 146 IQNMLVNSKADVIMSDMSPNVAGSPKFDHQAIMTQALCALKFTFANLVYNGTFICKMFHG 205
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+LK+++ ++ KP ASR+ES E + + + +
Sbjct: 206 SDEGLFKDMLKQNYHRINEFKPAASRSESNEFYYICRHRK 245
>gi|328867319|gb|EGG15702.1| rRNA methyltransferase [Dictyostelium fasciculatum]
Length = 254
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 111/205 (54%), Gaps = 8/205 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EG+RARSA+KLLQI++ + I + +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRKAKEEGYRARSAFKLLQIDDDYNIFEGVKRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNA--NNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVL 140
+R + + ++VA+DI +M P+ GV + D L++ E Q G DLV+
Sbjct: 58 ALSRKIYGDGSDPDVKIVAVDIQEMAPLKGVVQIRGDITKLETALEITNQFDGKQADLVV 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G ID L AA +L GG F+ K F+G + L+ F
Sbjct: 118 SDGAPDVTGLHDIDFYGQSQLILAALNITTHILRPGGCFVAKMFKGNDMTLMYNQLRVFF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+ V VKP +SR S+E F+L + +
Sbjct: 178 RSVQFVKPKSSRNSSLEAFVLCQHY 202
>gi|292611954|ref|XP_683228.2| PREDICTED: putative ribosomal RNA methyltransferase 2-like [Danio
rerio]
Length = 259
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 117/222 (52%), Gaps = 7/222 (3%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ + + + WL R ++DP+V+ A + +R RSA+KL+++++K+++L+ ++
Sbjct: 37 KKTPLHLKGKSTADKRWLIRQLSDPFVKAAHEQNYRCRSAFKLIEMDDKYRLLKPGFTVI 96
Query: 73 DLGSSPGSWSQVAARITGSNAN-----NTRVVAIDILDMEPILGVKFFKFD--FLDLDSW 125
D G++PG+WSQVA + S V+ IDIL + P+ G +F
Sbjct: 97 DCGAAPGAWSQVAVQRVNSTGESVDLPKGSVIGIDILHIFPLDGAQFLTNHDITSPSTHT 156
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
R D++LSDMA G R++DH R +S+C + A ++L GG + K +
Sbjct: 157 ALERLLPEAGADVILSDMAPNASGFRELDHERLVSMCLSMLDLADKVLRPGGSLICKYWD 216
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
GG + + L FQ V VKP ASR ES E+F LA+ +K
Sbjct: 217 GGLAHMLQQRLFSAFQDVRTVKPRASRKESAELFFLARMLKK 258
>gi|307183163|gb|EFN70073.1| Putative ribosomal RNA methyltransferase 1 [Camponotus floridanus]
Length = 381
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y ++A+ EGWRARSA+KLLQI+ + I + VDL ++PGSWSQV AR
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDTECHIFDGVSKAVDLCAAPGSWSQVLARKLN 64
Query: 91 SNAN---------NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
N ++VA+D+ M P+ GV + D + ++ + I DLV+
Sbjct: 65 ENYKKALETGNASPPKIVAVDLQAMAPLEGVIQLQGDITNTNTAQQIIAHFDNTQADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L GG F+ K F+ + + L+ F
Sbjct: 125 CDGAPDVTGLHDMDIFIQSQLLLAALNITTHILRPGGTFVAKIFRAKDVSFLYAQLRIFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F++ K +
Sbjct: 185 PYVYCTKPSSSRNSSIEAFVVCKDY 209
>gi|55726462|emb|CAH90000.1| hypothetical protein [Pongo abelii]
Length = 319
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 104/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++++ Q+ Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCGGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|255581073|ref|XP_002531352.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
gi|223529050|gb|EEF31036.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
Length = 316
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 74/205 (36%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
+R D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLY 64
Query: 91 SNANNTR---------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
A T+ +VAID+ M PI GV + D + + E + + G DLV+
Sbjct: 65 LPAKLTQDSRDDNLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L A +L GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILREGGKFIAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F + + +
Sbjct: 185 PVVTFAKPKSSRNSSIEAFAVCENY 209
>gi|145589197|ref|YP_001155794.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|189040319|sp|A4SXL6|RLME_POLSQ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|145047603|gb|ABP34230.1| 23S rRNA Um-2552 2'-O-methyltransferase [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 224
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 84/219 (38%), Positives = 114/219 (52%), Gaps = 14/219 (6%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
++ WL H+ DPYV+ AQ EG+RAR+ YKL +I+E+ ++++ IVDLGS+PGSW
Sbjct: 3 KNKFNKSWLQDHLTDPYVKMAQKEGYRARAVYKLSEIDEQDHLIKAGMTIVDLGSAPGSW 62
Query: 82 SQVAARI----------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
SQ S + +++AIDIL ME I V F + DF + + +
Sbjct: 63 SQYVRNRLTELGKSNPKIESGKPDGQIIAIDILPMEDIADVSFIQGDFREEEGLAALEAL 122
Query: 132 IG----GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
+ G DLVLSDMA G D R L E A FA L G L+K F G
Sbjct: 123 LPKSAEGKVDLVLSDMAPNLSGVGVADSARMAFLAEIALDFATAHLKPEGALLIKCFNGS 182
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ I+ KK F+ V KP ASRA+S E+FLL K +
Sbjct: 183 GYSQIVESFKKVFKTVASRKPKASRAKSSEIFLLGKNLK 221
>gi|115528317|gb|AAI24923.1| LOC431876 protein [Xenopus laevis]
Length = 762
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N K Q LQ R +VDL +
Sbjct: 1 MGKKGKVGKSR-------KDKFYHLAKETGYRSRSAFKLIQLNRKFQFLQRARALVDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGN 135
+PG W QVAA+ + + ++ ID++ ++PI V + D D + +++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIIGIDLVPIKPIPNVLTLQEDITTEDCRQAVKKHLQTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A + D + L A A + L+ GG F+ K F+ +L +
Sbjct: 111 ADVVLNDGAPNVGANWTHDAFSQVHLSLMALRLACDCLSRGGWFITKIFRSSDYQSLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L++ F+KV KP ASR+ES E+F++ +GF
Sbjct: 171 LQQFFKKVNSTKPQASRSESAEIFVVCQGF 200
>gi|94311127|ref|YP_584337.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Cupriavidus
metallidurans CH34]
gi|143461257|sp|Q1LLA8|RLME_RALME RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|93354979|gb|ABF09068.1| 23S rRNA methyltransferase [Cupriavidus metallidurans CH34]
Length = 221
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 85/216 (39%), Positives = 119/216 (55%), Gaps = 11/216 (5%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
++ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+++ +++Q + IVDLG++PGSW
Sbjct: 3 KNKFNQSWLHDHINDPYVKMAQREGYRARAAYKLKEIDDQDKLIQPGQVIVDLGAAPGSW 62
Query: 82 SQVAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
SQ A + VVAIDIL MEP+ V F + DF + + + + Q +
Sbjct: 63 SQYARNKLAASPRAKDGRIDGAVVAIDILPMEPVADVTFIQGDFREEEVFRQLEQVVLDA 122
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
G DLV+SDMA G D R LC+ A FA L G LVK F G +
Sbjct: 123 SGGSRIDLVISDMAPNLSGVASADAARIEYLCDLALDFAQAHLKPEGSLLVKCFHGSGYS 182
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I+ K+ F+ V KP ASR +S E F+L + +
Sbjct: 183 QIVEKFKRQFKVVASRKPKASRDKSSETFILGRYLK 218
>gi|242066866|ref|XP_002454722.1| hypothetical protein SORBIDRAFT_04g036220 [Sorghum bicolor]
gi|241934553|gb|EES07698.1| hypothetical protein SORBIDRAFT_04g036220 [Sorghum bicolor]
Length = 317
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KLLQI+++ I +R+VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKRVVDLCAAPGSWSQVLSRNLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ +VAID+ M PI GV + D + + E + + G DLV+
Sbjct: 65 VPAKQSPDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L +GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLKVGGKFVAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+V KP +SR S+E F + + +
Sbjct: 185 SQVTFAKPKSSRNSSIEAFAVCENY 209
>gi|134094399|ref|YP_001099474.1| ribosomal RNA large subunit methyltransferase J [Herminiimonas
arsenicoxydans]
gi|158513564|sp|A4G4B0|RLME_HERAR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|133738302|emb|CAL61347.1| Ribosomal RNA large subunit methyltransferase J (rRNA
(uridine-2'-O-)-methyltransferase) (23S rRNA
methyltransferase) [Herminiimonas arsenicoxydans]
Length = 214
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ +++WL+ HINDPYV+ AQ EG+RAR+ YKL +I+E ++++ + IVDLG +PGSW
Sbjct: 3 KKKLNKNWLHDHINDPYVKLAQKEGYRARAVYKLKEIDESEKLIKPGQIIVDLGCTPGSW 62
Query: 82 SQVAARITGSN---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-D 137
SQ + N ++ +D+L+MEPI V + + DF + + E + + G D
Sbjct: 63 SQYVRNKLSGSVGGGINGIIIGLDMLEMEPIADVHYIQGDFREQNVLEQLEVVLAGRKVD 122
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
LVLSDMA G D R M + E A FA + G LVK F G NDI+ +
Sbjct: 123 LVLSDMAPNLSGIAVADAARMMDIIELAIDFAQHHMKPSGSLLVKCFNGSGFNDIVEKFR 182
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP ASR +S E+FLL K +
Sbjct: 183 HEFKTVTQKKPKASRDKSSEIFLLGKTLK 211
>gi|195390727|ref|XP_002054019.1| GJ23026 [Drosophila virilis]
gi|194152105|gb|EDW67539.1| GJ23026 [Drosophila virilis]
Length = 313
Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 70/206 (33%), Positives = 106/206 (51%), Gaps = 10/206 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR--- 87
++ D Y ++A+ EGWRARSA+KL+ INE+ IL RR VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRQAKEEGWRARSAFKLMHINEQFGILNDVRRAVDLCAAPGSWSQVLSRKLF 64
Query: 88 ---ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP----DLVL 140
+T + +++A+D+ M PI GV + D + E I G + LV+
Sbjct: 65 DSCLTDDEKSEVKIIAVDLQAMAPIRGVIQLQGDITKESTAEAIIAHFGNDADQKAQLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G ++D L +A A +L GG F+ K F+G + + + F
Sbjct: 125 CDGAPDVTGVHEMDEYMQNQLIVSALSIATFVLETGGTFVAKIFKGNANSLLESQMLTFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+ KP +SR S+E F++ GFR
Sbjct: 185 ENFHIYKPPSSRPSSIEAFVVCTGFR 210
>gi|146413993|ref|XP_001482967.1| hypothetical protein PGUG_04922 [Meyerozyma guilliermondii ATCC
6260]
Length = 256
Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats.
Identities = 73/222 (32%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query: 5 PGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQI 64
G+S L +++++S SS WL R +DP+ + A+ + +R+R+AYKL++++ K +
Sbjct: 33 SGTSKHCQLNVQIRSKS-SVSSERWLRRQKDDPHTKEAKKQHYRSRAAYKLIELDHKFLL 91
Query: 65 LQSNR-RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
+ N RIVDLG +PG+W+QVA + +++ +DI+ P G +F D
Sbjct: 92 FKRNTLRIVDLGFAPGAWTQVAMQRMAQLGQKPKILGVDIIPSTPPEGAQFLHGDIFSRK 151
Query: 124 SWEFIR-QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
+ + IR DLV+SDM T+G + DHL +M LCE A A L G ++K
Sbjct: 152 THQEIRDNFPNNEVDLVMSDMMANTLGIKDNDHLASMELCEGALMLAASTLKTNGALVMK 211
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+ G + +K F+KV +KP A R E EM+ + G
Sbjct: 212 FYTGREERQLEEKCRKMFKKVHRMKPSACRPELREMYFVCLG 253
>gi|218888283|ref|YP_002437604.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio vulgaris
str. 'Miyazaki F']
gi|226703295|sp|B8DNJ4|RLME_DESVM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|218759237|gb|ACL10136.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 201
Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats.
Identities = 64/192 (33%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y +A+ E + ARS YKL +I+ + ++ + +++DLG++PGSWS AA G
Sbjct: 5 RDHYFLKAKQENYPARSIYKLKEIDNRFKLFRQGMKVLDLGAAPGSWSLGAAERVGPKG- 63
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ D + V F + D + A G +V+SDMA T G R D
Sbjct: 64 RVLACDLQTTDTQFPPNVTFMQEDVFNRSEAFEDALAAMGPFHVVISDMAPRTTGTRFTD 123
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ LC A A L GG F+VK F G +L L+ F+ V KP +SR E
Sbjct: 124 QARSLELCIEALAVADHCLIKGGSFVVKIFMGPDVKQLLDALRARFETVKTFKPKSSRVE 183
Query: 215 SVEMFLLAKGFR 226
S E F + G+R
Sbjct: 184 SKETFYVCLGYR 195
>gi|291415281|ref|XP_002723882.1| PREDICTED: FtsJ homolog 2 [Oryctolagus cuniculus]
Length = 740
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 87/216 (40%), Positives = 128/216 (59%), Gaps = 7/216 (3%)
Query: 18 KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSS 77
+ SC G+ WL RH+ DP+V+ A+ E +R RSA+KLL+++ KH+IL+ R++D G++
Sbjct: 23 RRESCSGAEHRWLQRHLRDPFVKAARAESYRCRSAFKLLEMDRKHRILRPGLRVLDCGAA 82
Query: 78 PGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQ- 130
PGSWSQVA + ++ V+ +D+L + P+ G F D +D +W IR+
Sbjct: 83 PGSWSQVAVQRVNAAGTDPSSPVGFVLGVDVLHVFPLEGATFLCPADVMDPGAWPRIREL 142
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
GG D+VLSDMA G R +DH R +SLC A A ++L GG L KT+ G ++
Sbjct: 143 LPGGVADVVLSDMAPNATGIRALDHDRLISLCLALVDLAPDLLQPGGTLLCKTWAGSQSH 202
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ L++ F V VKP ASR ES E++LLA R
Sbjct: 203 RLQSRLREEFLSVRAVKPEASRKESAEVYLLATQHR 238
>gi|114051497|ref|NP_001040360.1| cell division protein [Bombyx mori]
gi|95102628|gb|ABF51252.1| cell division protein [Bombyx mori]
Length = 298
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ EGWRARSA+KLLQINE++ I R VDL ++PGSWSQV +
Sbjct: 5 SKDKRDIYYRLAKEEGWRARSAFKLLQINEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLR 64
Query: 91 SNA---NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYP 146
NA + ++VA+D+ M + GVK + D ++ I + G DLV+ D A
Sbjct: 65 QNAVNTEDVKIVAVDLQAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPD 124
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G ID L AA +L G F+ K F+G + + LK+ F+ V
Sbjct: 125 VTGLHDIDEYVQSQLLLAALNITTHVLKNEGTFVAKIFRGKDVSLLYSQLKQFFKLVTVS 184
Query: 207 KPVASRAESVEMFLLAKGF 225
KP +SR S+E F++ + +
Sbjct: 185 KPRSSRNSSIEAFVICEKY 203
>gi|255067624|ref|ZP_05319479.1| ribosomal RNA large subunit methyltransferase J [Neisseria sicca
ATCC 29256]
gi|255048098|gb|EET43562.1| ribosomal RNA large subunit methyltransferase J [Neisseria sicca
ATCC 29256]
Length = 184
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 80/187 (42%), Positives = 110/187 (58%), Gaps = 4/187 (2%)
Query: 41 RAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSWSQVAA++ G++ RV A
Sbjct: 1 MAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVAAKLVGNS---GRVFA 57
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
+DIL M+ I GV F + DF + + DLV+ DMA G+ D R+
Sbjct: 58 LDILPMDEIEGVSFIQGDFREDEVLAQFETLLDARPLDLVICDMAPNMSGNAVTDQARSF 117
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
LCE A FA+ L GG FLVK FQG + + +++ F V KP ASR S E++
Sbjct: 118 YLCELALDFAVNHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIY 177
Query: 220 LLAKGFR 226
LL K R
Sbjct: 178 LLGKNKR 184
>gi|156058214|ref|XP_001595030.1| hypothetical protein SS1G_03118 [Sclerotinia sclerotiorum 1980]
gi|154700906|gb|EDO00645.1| hypothetical protein SS1G_03118 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 347
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYP 146
+ + +V +D+ ++PI V F+ D IR D VL D A
Sbjct: 65 TMPVS---SLIVGVDLSPIKPIPRVITFQSDITTEKCRATIRTHFKSWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + + F KV
Sbjct: 122 VGTAWVQDSFNQAELALQSLKLATEFLAPGGTFVTKVFRSKDYNSLLWVFNQLFTKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCQGFK 201
>gi|224146194|ref|XP_002325916.1| predicted protein [Populus trichocarpa]
gi|222862791|gb|EEF00298.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
+R D Y ++A+ EGWRARSA+KL+QI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLIQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ + +VAID+ M I GV + D + + E + + G+ DLV+
Sbjct: 65 LPAKLSPDSRDNDLPLIVAIDLQPMALIEGVIQVQGDITNARTAEVVIRHFDGSKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L A +L GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAGLTIVTHVLKEGGKFIAKIFRGKDTSLLYCQLKLFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F + + +
Sbjct: 185 PVVTFAKPKSSRNSSIEAFAVCENY 209
>gi|321438509|emb|CBZ12268.1| putative FtsJ cell division protein [Leishmania major strain
Friedlin]
Length = 924
Score = 164 bits (414), Expect = 9e-39, Method: Composition-based stats.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSAYKL+Q+N K+ L +R +V
Sbjct: 1 MGVKSKKKAKT----------RLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DL ++PG W QVAA+ +++V +D++ + PI GVK F D D + + I +
Sbjct: 51 DLCAAPGGWCQVAAQHMAIG---SKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYL 107
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
P D V+ D A G D +L A+ A ML G F+ K F+ ++
Sbjct: 108 KKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKANGWFVTKVFRSPDFHN 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L + K+ F+KV KP ASR ES E+F++ GF+
Sbjct: 168 LLWVFKQLFEKVEATKPQASRMESAEIFVVCAGFK 202
>gi|322500269|emb|CBZ35347.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 925
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSAYKL+Q+N K+ L +R +V
Sbjct: 1 MGVKSKKKAKT----------RLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DL ++PG W QVAA+ +++V +D++ + PI GVK F D D + + I +
Sbjct: 51 DLCAAPGGWCQVAAQHMAIG---SKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYL 107
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
P D V+ D A G D +L A+ A ML G F+ K F+ ++
Sbjct: 108 KKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKANGWFVTKVFRSPDFHN 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L + K+ F+KV KP ASR ES E+F++ GF+
Sbjct: 168 LLWVFKQLFEKVEATKPQASRMESAEIFVVCAGFK 202
>gi|224011377|ref|XP_002295463.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583494|gb|ACI64180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 221
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
L+R D + ++A+ G+RARSA+KL+QI+ + +L R VDL ++PG WSQV
Sbjct: 4 LSRDKRDVFYRKAKETGYRARSAFKLIQIDNEFDLL--VHRAVDLCAAPGGWSQVLVERI 61
Query: 90 ---------------------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
G N +VA+D+ MEP+ GV + D L++ + I
Sbjct: 62 VPQDAVAKTEASTKDKLNGASGENIGTPAIVAVDLWPMEPLPGVHCIQGDITSLETAQKI 121
Query: 129 RQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
Q G +LV+ D A D L +A + +L+ G F+ K F+G
Sbjct: 122 IQHFHGRRAELVVCDGAPDVTNLHSFDSYTQSQLLLSAINISTHVLSPNGIFVAKIFRGR 181
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
I L+ F+ V+ KP ASR S+E F++ +GF
Sbjct: 182 DVGLIYTQLQLLFENVVCAKPTASRNASIESFVVCRGF 219
>gi|332025843|gb|EGI65999.1| Putative ribosomal RNA methyltransferase 1 [Acromyrmex echinatior]
Length = 397
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 101/205 (49%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y ++A+ EGWRARSA+KLLQI+ + I + VDL ++PGSWSQV AR
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDSECHIFDGVSKAVDLCAAPGSWSQVLARKLT 64
Query: 91 SNANN---------TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
N ++VA+D+ M P+ GV + D + + E I + DLV+
Sbjct: 65 ENYKKALEKGPASKPKIVAVDLQAMAPLEGVIQLQGDITNSSTAEQIIAYFDNSRADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA A +L GG F+ K F+ + + L+ F
Sbjct: 125 CDGAPDVTGLHDMDIFIQSQLLLAALNIATYILRPGGTFVAKIFRAKDVSLLYAQLRIFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F++ K +
Sbjct: 185 PYVYCTKPSSSRNSSIEAFVVCKDY 209
>gi|322796151|gb|EFZ18727.1| hypothetical protein SINV_05439 [Solenopsis invicta]
Length = 359
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y ++A+ EGWRARSA+KLLQI+ + I + VDL ++PGSWSQV AR
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDSECHIFDGVSKAVDLCAAPGSWSQVLARKLK 64
Query: 91 SN---------ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
N A+ ++VA+D+ M P+ GV + D + ++ + I DLV+
Sbjct: 65 ENYEKASEKGSASPPKIVAVDLQAMAPLEGVIQLQGDITNTNTAKEIIAHFDNTRADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA A +L GG F+ K F+ + L+ F
Sbjct: 125 CDGAPDVTGLHDMDIFIQSQLLLAALNIATHILRPGGTFVAKIFRAKDVTFLYAQLRIFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F++ K +
Sbjct: 185 PYVYCTKPSSSRNSSIEAFVVCKDY 209
>gi|17554650|ref|NP_497843.1| hypothetical protein R74.7 [Caenorhabditis elegans]
gi|9910861|sp|Q22031|RRMJ1_CAEEL RecName: Full=Putative ribosomal RNA methyltransferase R74.7;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|5824584|emb|CAA85279.2| C. elegans protein R74.7, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 337
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 106/196 (54%), Gaps = 1/196 (0%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
+R D Y + A+ WRARSA+KL+QI+++ QIL+ RR VDL ++PGSWSQV ++
Sbjct: 5 SRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLSKRLY 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
++VAID+ M PI GV + D +D+ + + G D+V+ D A G
Sbjct: 65 EEDQEAKIVAIDLQPMAPIPGVIQLQGDITSVDTANQVIKHFSGEKSDIVICDGAPDVTG 124
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA +L GG+FL K F+ ++ + +KK+F+KV KP
Sbjct: 125 IHSLDEFMQAELILAAFNITSHVLKEGGNFLAKIFRSRNSSLLYAQMKKYFKKVYLAKPR 184
Query: 210 ASRAESVEMFLLAKGF 225
+SR S E F+L +
Sbjct: 185 SSRQSSCEAFVLCLDY 200
>gi|21672644|ref|NP_660711.1| cell division protein FtsJ [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25091195|sp|Q8K9G7|RLME_BUCAP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|21623279|gb|AAM67922.1| cell division protein FtsJ [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 206
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
++ SS WL+ H D YV+ A+ + R+RS +KL +I++ +++ + ++DLGSSP
Sbjct: 3 SKKKSNSSNRWLSEHFQDQYVKEAKKQKIRSRSWFKLEEIDKNNRLFKPGMNVLDLGSSP 62
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPD 137
G WSQ AA+ G ++A DIL M+ I GV FF+ DF + + I N +
Sbjct: 63 GGWSQYAAKKIGKKGY---ILACDILPMKKIKGVDFFQGDFCNKKTLNLILTNLSNVNLN 119
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
L++SDMA G ID R + +C+ + +L+ G LVK+FQG N+ +K
Sbjct: 120 LIMSDMAPNITGCSSIDMPRIIEICKTVFTISDHVLSRNGVVLVKSFQGEGFNEFFAQMK 179
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAK 223
F K+ KP SR+ S E+F+LA
Sbjct: 180 NLFSKIKICKPKTSRSRSREIFMLAT 205
>gi|158291561|ref|XP_313065.3| AGAP004177-PA [Anopheles gambiae str. PEST]
gi|157017606|gb|EAA08541.3| AGAP004177-PA [Anopheles gambiae str. PEST]
Length = 248
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 7/213 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS++WL R + DPYV+RA++ +R RSA+KLL+I+ K+ +++ ++D G+SPG
Sbjct: 31 KGKSKSSQEWLTRQLRDPYVERAKMMNYRCRSAFKLLEIDSKYGLVKPGHTVIDCGASPG 90
Query: 80 SWSQVAARITG-----SNANNTRVVAIDILDMEPILGVK-FFKFDFLDLDSWEFIR-QAI 132
SW+Q+A + + VV +D+L + PI F DFL ++ + IR
Sbjct: 91 SWTQIAVKQSNADGGLPGKPKGMVVGVDLLQIYPIEHAILFGNSDFLRKETQDKIRASLG 150
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D VLSDMA G R +D +LC A FA+ M L+K + G +
Sbjct: 151 ERRVDCVLSDMAPNASGIRALDQENITTLCYAVLRFAILMSTPNASLLMKVWDNGDVPKL 210
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ ++++ V VKP ASR +S E F+LA+GF
Sbjct: 211 EKSILEYYKTVKRVKPRASRDDSAENFILARGF 243
>gi|146091082|ref|XP_001466438.1| FtsJ cell division protein [Leishmania infantum JPCM5]
gi|134070800|emb|CAM69158.1| putative FtsJ cell division protein [Leishmania infantum JPCM5]
Length = 925
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSAYKL+Q+N K+ L +R +V
Sbjct: 1 MGVKSKKKAKT----------RLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DL ++PG W QVAA+ +++V +D++ + PI GVK F D D + + I +
Sbjct: 51 DLCAAPGGWCQVAAQHMAIG---SKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYL 107
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
P D V+ D A G D +L A+ A ML G F+ K F+ ++
Sbjct: 108 KKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKANGWFVTKVFRSPDFHN 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L + K+ F+KV KP ASR ES E+F++ GF+
Sbjct: 168 LLWVFKQLFEKVEATKPQASRMESAEIFVVCAGFK 202
>gi|254582987|ref|XP_002499225.1| ZYRO0E06952p [Zygosaccharomyces rouxii]
gi|238942799|emb|CAR30970.1| ZYRO0E06952p [Zygosaccharomyces rouxii]
Length = 291
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 10/207 (4%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ--SNRRIVDLGSSPGSW 81
SS+D D Y ++A+ +G+RARSA+KLLQ+NE+ L + +R+VDL ++PGSW
Sbjct: 3 KSSKD-----KRDLYYRKAKEQGYRARSAFKLLQLNEEFHFLDDPNLKRVVDLCAAPGSW 57
Query: 82 SQVAARITGSNANNT--RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DL 138
SQV +R + T ++VA+D+ M PI V + D + I + G + D
Sbjct: 58 SQVLSRKLFDKDDYTDRQIVAVDLQAMMPIDHVTTLQADITHPRTLHQILELFGNHRADF 117
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V SD A G +D L +A + +L GG F+ K F+G + I L
Sbjct: 118 VCSDGAPDVTGLHDLDEYVQQQLIMSALQLTVCILKRGGTFVAKIFRGRDIDLIYAQLGY 177
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGF 225
F +V KP +SR S+E F++ +G+
Sbjct: 178 LFDQVTCAKPRSSRGSSLEAFVVCQGY 204
>gi|20090152|ref|NP_616227.1| 23S RNA methyltransferase J [Methanosarcina acetivorans C2A]
gi|74532956|sp|Q8TR92|RLME_METAC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|19915136|gb|AAM04707.1| 23S RNA methyltransferase J [Methanosarcina acetivorans C2A]
Length = 272
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 115/197 (58%), Gaps = 6/197 (3%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ R D Y +A+ EG+R+R+++KL QINEKH +++ +VDLG++PG W QVA +++
Sbjct: 1 MARDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWLQVAKQLS 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYPTI 148
G +V+ +D+ + PI GV+ + D + + I +A+ D+VL D A
Sbjct: 61 G-----GKVLGVDLQRIAPIEGVETIQGDINADSTIKKIIRAVGEKGADVVLCDAAPNLS 115
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+ DH R++ L +A A ++L G+F+VK FQG ND L ++ +F V P
Sbjct: 116 GNWSYDHARSIELTTSALECAKKILKPKGNFVVKVFQGDMFNDYLEKVRDNFVHVKAYSP 175
Query: 209 VASRAESVEMFLLAKGF 225
ASR++S E++++ K F
Sbjct: 176 QASRSQSAEIYVIGKKF 192
>gi|328848748|gb|EGF97947.1| hypothetical protein MELLADRAFT_84132 [Melampsora larici-populina
98AG31]
Length = 294
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL----QSNRRIVDLGSSPGSWSQVAA 86
++ D + + ++ EG+RARSAYKL+ +++ + + Q + +VDL ++PGSWSQV
Sbjct: 5 SKDQRDIFYRLSKSEGYRARSAYKLIHLDQHYHLFNNPNQPIKTVVDLCAAPGSWSQVLV 64
Query: 87 RITGSNANN----TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL-VLS 141
G + ++VA+D+ M P+ GV D +++ + I G V+
Sbjct: 65 NKLGHHPELHDELPKIVAVDLQPMAPLSGVHQLMGDITQIETAQAIMSYFNGQKTDLVVC 124
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA L +L GG F+ K F+G +L L F+
Sbjct: 125 DGAPDVTGLHDLDEFVQAQLLLAALNITLSLLREGGSFVAKIFKGRDVGLLLSQLDCFFE 184
Query: 202 KVIHVKPVASRAESVEMFLLAKGFR 226
+V KP +SR S+E F++ + ++
Sbjct: 185 EVSTFKPKSSRDSSIESFVICRNYK 209
>gi|113868416|ref|YP_726905.1| 23S rRNA methylase [Ralstonia eutropha H16]
gi|122946743|sp|Q0K8Y4|RLME_CUPNH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|113527192|emb|CAJ93537.1| 23S rRNA methylase [Ralstonia eutropha H16]
Length = 221
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 85/216 (39%), Positives = 117/216 (54%), Gaps = 11/216 (5%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSW
Sbjct: 3 KNKFNHSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSW 62
Query: 82 SQVAAR------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
SQ A + VVAID+L MEP+ V F + DF + + + +
Sbjct: 63 SQYARNKLADSPRAKDGRIDGAVVAIDLLPMEPVADVTFIQGDFREESVFRELESVVLDA 122
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
G DLVLSDMA G D R LC+ A FA L G LVK F G +
Sbjct: 123 SGGNKIDLVLSDMAPNLSGVAFADAARIEYLCDLALEFAQAHLKPEGALLVKCFHGSGYS 182
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I+ K+HF+ V KP ASR +S E F+L + +
Sbjct: 183 QIVEKFKRHFKVVAKRKPKASRDKSSETFILGRYLK 218
>gi|239790974|dbj|BAH72013.1| ACYPI009233 [Acyrthosiphon pisum]
Length = 307
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 10/208 (4%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KL+QIN + ++L +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRLAKEQGWRARSAFKLIQINSQFKVLDGVKRVVDLCAAPGSWSQ 57
Query: 84 VAAR---ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DL 138
V ++ + ++ ++VA+D+ M P+ GV K D + I G DL
Sbjct: 58 VLSKALYSDSDDKDDVKIVAVDLQSMAPLPGVVQLKGDITKESTANEILAQFDGGRLVDL 117
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+ D A G +D L AA +L GG F+ K F+G ++ ++ L+
Sbjct: 118 VVFDGAPDVTGLHDLDEYVQAQLLLAALNITTYLLKPGGTFIGKIFRGKDSSLLISQLEI 177
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V+ KP +SR S+E F++ + FR
Sbjct: 178 FFGDVVVAKPCSSRNSSIESFVVCRDFR 205
>gi|300124014|emb|CBK25285.2| unnamed protein product [Blastocystis hominis]
Length = 840
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + A+ +G+RARSA+KL+Q+N + L ++DL ++PG W QVAA+
Sbjct: 10 DKWYALAKQQGYRARSAFKLIQLNRQFNFLSKAHVLIDLCAAPGGWCQVAAKQMPIE--- 66
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+L ++PI VK F+ D L + R+ G + D+VL D A G D
Sbjct: 67 STIIGVDLLPIKPIHNVKTFQEDITTLSCRDVIKRELHGKHADVVLHDGAPNVGGGWSKD 126
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
SL + A+E + G F+ K F+ + ++ + + F+KV KP ASR E
Sbjct: 127 AFDQNSLVLHSLRLAVEFMTKGATFVTKVFRSADYHALIYIFNQLFEKVQATKPAASRTE 186
Query: 215 SVEMFLLAKGFR 226
S E+F++ + ++
Sbjct: 187 SAEIFVVCQNYK 198
>gi|68074943|ref|XP_679388.1| ribosomal RNA methyltransferase [Plasmodium berghei strain ANKA]
gi|56500124|emb|CAH98004.1| ribosomal RNA methyltransferase, putative [Plasmodium berghei]
Length = 253
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 77/226 (34%), Positives = 127/226 (56%), Gaps = 4/226 (1%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
M + + K+ N+ SS+ W+ R I D YV +A+ E +R+R+A+KL++++
Sbjct: 8 MFQSTYIRLYKEALPKIYNKKSSHSSK-WIQRQITDRYVLKAKNENYRSRAAFKLIELDN 66
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
K+ L+ N+ I+D+GS PGSW QV T + ++AID M+P+ V F K +
Sbjct: 67 KYLFLKKNKTILDIGSYPGSWCQVILERTKN--YTNEIIAIDKKIMDPLPNVHFIKAEIG 124
Query: 121 DLDSWEFIRQ-AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+ + +++ D++LSD A IG++ DHL + L + T F + +NIGG +
Sbjct: 125 KDNVDDQLKEVLKDKKIDIILSDAAVACIGNKIDDHLNSCELTLSITNFMEQYINIGGVY 184
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+VK + G TN++ LK FQ V KP ASR+ES E++L+ + F
Sbjct: 185 IVKMYLGSQTNNLKTYLKTIFQYVNTAKPKASRSESREIYLVCRNF 230
>gi|84996593|ref|XP_953018.1| ribosomal RNA methyltransferase (FtsJ homologue) [Theileria
annulata strain Ankara]
gi|65304014|emb|CAI76393.1| ribosomal RNA methyltransferase (FtsJ homologue), putative
[Theileria annulata]
Length = 237
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 73/214 (34%), Positives = 122/214 (57%), Gaps = 2/214 (0%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
++ N + SS +W+ R I D Y+ + ++ +R+RSAYKL+++++K+ I + N+ +V
Sbjct: 2 RGVRLVNIASTHSS-EWVRRQITDRYLIQKHIDNYRSRSAYKLIELDDKYFIFRKNQTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
+LG PG W+QVA T + A+++RV+ ID ++PI F K + D ++ + +
Sbjct: 61 ELGCYPGGWAQVALERTLTGASSSRVIGIDKTQIDPIPNYDFIKGEINDQETHNKLLTLL 120
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+VLSD+A G + DHL + LC A +++ +GG F+VK F GG +
Sbjct: 121 DGVKADVVLSDLAPNCTGIKMDDHLNSAELCLQAASLMEKIITVGGTFVVKMFMGGQLDR 180
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L+ F +V KP A R+ES EM+ + K F
Sbjct: 181 YKTYLRSLFSEVRSAKPKACRSESKEMYFVCKNF 214
>gi|322368172|ref|ZP_08042741.1| ribosomal RNA large subunit methyltransferase J [Haladaptatus
paucihalophilus DX253]
gi|320552188|gb|EFW93833.1| ribosomal RNA large subunit methyltransferase J [Haladaptatus
paucihalophilus DX253]
Length = 254
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 114/191 (59%), Gaps = 4/191 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y +++ +G+R+R+AYKL Q++E +L +VDLG++PG W QVAA G
Sbjct: 3 RKDHYYNKSKQQGYRSRAAYKLKQLDESAHLLHEGETVVDLGAAPGGWLQVAAEEVG--- 59
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+ V+ +D+ ++ I GV+ + D + ++ E + + G+ D+VLSDMA G +
Sbjct: 60 DTGTVIGVDLQRIKDIDGVETIRGDMTEEETQEEVID-VAGSADVVLSDMAPNMTGEYSL 118
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH R++ L A ALE+L+ GGDF+VK FQG +D+ ++ F+ V + P ASR
Sbjct: 119 DHARSVYLARQAFETALELLDSGGDFVVKVFQGPDLDDLREDMEPEFEYVRTMSPDASRD 178
Query: 214 ESVEMFLLAKG 224
ES E++L+A+
Sbjct: 179 ESSEVYLVARK 189
>gi|300121815|emb|CBK22389.2| unnamed protein product [Blastocystis hominis]
Length = 840
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + A+ +G+RARSA+KL+Q+N + L ++DL ++PG W QVAA+
Sbjct: 10 DKWYALAKQQGYRARSAFKLIQLNRQFNFLSKAHVLIDLCAAPGGWCQVAAKQMPIE--- 66
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+L ++PI VK F+ D L + R+ G + D+VL D A G D
Sbjct: 67 STIIGVDLLPIKPIHNVKTFQEDITTLSCRDVIKRELHGKHADVVLHDGAPNVGGGWSKD 126
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
SL + A+E + G F+ K F+ + ++ + + F+KV KP ASR E
Sbjct: 127 AFDQNSLVLHSLRLAVEFMTKGATFVTKVFRSADYHALIYIFNQLFEKVQATKPAASRTE 186
Query: 215 SVEMFLLAKGFR 226
S E+F++ + ++
Sbjct: 187 SAEIFVVCQNYK 198
>gi|154340024|ref|XP_001565969.1| FtsJ cell division protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 927
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSAYKL+Q+N K+ L +R +V
Sbjct: 1 MGVKSKKKAKT----------RLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DL ++PG W QVAA+ +++V +D++ + PI GVK F D +D + + I +
Sbjct: 51 DLCAAPGGWCQVAAQHMPIG---SKIVGVDLVPIAPIRGVKTFVGDIVDDKTRKMIVTYL 107
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
P D V+ D A G D +L A+ A ML G F+ K F+ ++
Sbjct: 108 KKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLRASGWFVTKVFRSPDFHN 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L + K+ F KV KP ASR ES E+F++ GF+
Sbjct: 168 LLWVFKQLFDKVEATKPQASRMESAEIFVVCAGFK 202
>gi|73544523|ref|XP_848156.1| FtsJ cell division protein [Leishmania major strain Friedlin]
Length = 924
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSAYKL+Q+N K+ L +R +V
Sbjct: 1 MGVKSKKKAKT----------RLDAYYRLAKGQGYRARSAYKLIQLNRKYDFLAKSRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DL ++PG W QVAA+ +++V +D++ + PI GVK F D D + + I +
Sbjct: 51 DLCAAPGGWCQVAAQHMAIG---SKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYL 107
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
P D V+ D A G D +L A+ A ML G F+ K F+ ++
Sbjct: 108 KKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKANGWFVTKVFRSPDFHN 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L + K+ F+KV KP ASR ES E+F++ GF+
Sbjct: 168 LLWVFKQLFEKVEATKPQASRMESAEIFVVCAGFK 202
>gi|66504555|ref|XP_392223.2| PREDICTED: putative ribosomal RNA methyltransferase 1-like isoform
1 [Apis mellifera]
Length = 370
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 101/205 (49%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y +RA+ EGWRARSA+KLLQI+ + IL + VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRRAKEEGWRARSAFKLLQIDNECHILDGVNKAVDLCAAPGSWSQVLSRRLN 64
Query: 91 SNAN---------NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
N ++VA+D+ M P+ GV + D ++D+ + I DLV+
Sbjct: 65 ENYKKALETGNAIPPKIVAVDLQAMAPLEGVIQIQGDITNIDTAKQIISHFDNEQADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L GG F+ K F+ + LK F
Sbjct: 125 CDGAPDVTGLHDMDIYIQSQLLLAALNITTHILKQGGTFVAKIFRAKDVTLLYAQLKIFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP +SR S+E F++ K +
Sbjct: 185 PYVYCTKPSSSRNSSIEAFVVCKDY 209
>gi|149192156|ref|ZP_01870376.1| 23S rRNA methyltransferase J [Vibrio shilonii AK1]
gi|148833996|gb|EDL51013.1| 23S rRNA methyltransferase J [Vibrio shilonii AK1]
Length = 192
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 106/195 (54%), Gaps = 4/195 (2%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARRKGYRSRAIFKIEEIQNKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA++ G + +V+A D+L M+PI GV F + DF + + +
Sbjct: 61 APGGWSQYAAKVLG---DEGQVIACDLLPMDPISGVSFLQGDFREEAVLNALLERIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDMA G+ +D R M L E A + L GG F+VK FQG ++ +
Sbjct: 118 VDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCHQTLAPGGSFVVKVFQGEGFDEYVKQ 177
Query: 196 LKKHFQKVIHVKPVA 210
++ F+ V KP +
Sbjct: 178 VRDAFKVVKIRKPDS 192
>gi|50556146|ref|XP_505481.1| YALI0F16049p [Yarrowia lipolytica]
gi|49651351|emb|CAG78290.1| YALI0F16049p [Yarrowia lipolytica]
Length = 312
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 38/236 (16%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KLLQ++++ + +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRKAKEEGWRARSAFKLLQLDQQFHLFDGVQRVVDLCAAPGSWSQ 57
Query: 84 VAARIT--------------------------------GSNANNTRVVAIDILDMEPILG 111
V +R S ++V++D+ M PI G
Sbjct: 58 VLSRELFEKRGIEAGSGKTVAGSTFGGKVVTGESTAQKSSTMEKAKIVSVDLQPMAPIAG 117
Query: 112 VKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
V + D + + I GG P D V SD A G +D L +A
Sbjct: 118 VTTIQADITHPQTLKMILDEFGGEPADFVCSDGAPDVTGLHDLDEYTQAQLILSALQLTT 177
Query: 171 EMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L GG+F+ K F+G + + L F++V KP +SR S+E F++ +G++
Sbjct: 178 QLLRPGGNFVAKIFRGRDIDLMYFQLGLLFEQVTCAKPRSSRGSSLESFIVCQGYK 233
>gi|226469920|emb|CAX70241.1| FtsJ homolog 1 [Schistosoma japonicum]
Length = 345
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-----SNRRIVDLGSSPGSWSQVA 85
+R D Y + A+ EGWRARSAYKLLQI++++ IL R+VDL ++PGSWSQV
Sbjct: 5 SRDKRDIYYRLAKEEGWRARSAYKLLQIDDEYGILSSTENIPLERVVDLCAAPGSWSQVL 64
Query: 86 ARIT-----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
++ + + ++VA+D+ M PI GV + D D+ + I + G LV
Sbjct: 65 SKRLWESKSPDDRKSVKIVAVDLQAMAPIPGVIQIQGDITSQDTAQQIIKHFSGKLAQLV 124
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+ D A G +D L AA +L +GG F+ K F+G + + L+
Sbjct: 125 VCDGAPDVTGLHDLDEYVQSHLILAALTICSRVLELGGTFVAKVFRGRDSGLLGSQLRCL 184
Query: 200 FQ-KVIHVKPVASRAESVEMFLLAKGF 225
F +V KP ASR S+E F++ +GF
Sbjct: 185 FSGQVSFAKPKASRNSSLESFVVCRGF 211
>gi|322505203|emb|CAM45493.2| putative FtsJ cell division protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 927
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSAYKL+Q+N K+ L +R +V
Sbjct: 1 MGVKSKKKAKT----------RLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DL ++PG W QVAA+ +++V +D++ + PI GVK F D +D + + I +
Sbjct: 51 DLCAAPGGWCQVAAQHMPIG---SKIVGVDLVPIAPIRGVKTFVGDIVDDKTRKMIVTYL 107
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
P D V+ D A G D +L A+ A ML G F+ K F+ ++
Sbjct: 108 KKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKASGWFVTKVFRSPDFHN 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L + K+ F KV KP ASR ES E+F++ GF+
Sbjct: 168 LLWVFKQLFDKVEATKPQASRMESAEIFVVCAGFK 202
>gi|316972372|gb|EFV56050.1| putative serine protease pcp-1 [Trichinella spiralis]
Length = 826
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 111/220 (50%), Gaps = 13/220 (5%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
R SS+ W+ RH+ DPYV R + E +R RSA+KLL+I+++ QIL+ ++DLGSSPG
Sbjct: 606 RRASSSSKQWIARHLRDPYVVRCRSENYRCRSAFKLLEIDDRFQILKPGMLVLDLGSSPG 665
Query: 80 SWSQVAARITGS----NANNTRVVAIDILDMEPILGVKFFKF-------DFLDLDSWEFI 128
SWSQV +R S + +V A+D MEP+ GV + L
Sbjct: 666 SWSQVLSRRVNSVKLGSKPFGKVFAVDRQPMEPLDGVTWLGPLDLSVGDSVDVLLQRRRR 725
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN--IGGDFLVKTFQG 186
G D V+SDMA G +DH R + L + A+ L FL K +QG
Sbjct: 726 LIDGGEPLDAVVSDMAPNATGCASVDHERIVQLGFLSLSIAIRCLKLSDRSFFLCKLWQG 785
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+K+HF VKP ASR ES E++ LA+ F+
Sbjct: 786 VEQWHFADEIKRHFGNFKIVKPTASRKESAELYFLARQFK 825
>gi|303251539|ref|ZP_07337713.1| 23S rRNA methyltransferase J [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649537|gb|EFL79719.1| 23S rRNA methyltransferase J [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 187
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 67/188 (35%), Positives = 105/188 (55%), Gaps = 4/188 (2%)
Query: 40 QRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVV 99
Q+A + R+R+ +KL +I + ++ + +VDLG++PG WSQ A GS R++
Sbjct: 2 QKAHKQKLRSRAYFKLDEIQQTDRLFKPGMTVVDLGAAPGGWSQYAVTQIGSK---GRII 58
Query: 100 AIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRT 158
A DILDM PI+GV F + DF + + + +G + D+V+SDMA G +D R
Sbjct: 59 ACDILDMNPIVGVDFLQGDFREESVLNALLERVGDDMVDVVMSDMAPNFSGMPSVDIPRA 118
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
M L E A ++L G F+VK FQG ++ L ++ F V KP ASR S E+
Sbjct: 119 MYLVELALDMCRQVLAPKGSFVVKVFQGEGFDEYLRDIRAMFTAVKVRKPEASRDRSREV 178
Query: 219 FLLAKGFR 226
+++A G++
Sbjct: 179 YIVATGYK 186
>gi|213402435|ref|XP_002171990.1| AdoMet-dependent rRNA methyltransferase spb1 [Schizosaccharomyces
japonicus yFS275]
gi|212000037|gb|EEB05697.1| AdoMet-dependent rRNA methyltransferase spb1 [Schizosaccharomyces
japonicus yFS275]
Length = 795
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+R+R+A+KL+Q+N+K+ L+ R ++DL ++PG W QVA++
Sbjct: 14 DKWYKLAKEQGYRSRAAFKLVQLNKKYNFLEKARVVIDLCAAPGGWLQVASKTCKPG--- 70
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKID 154
+ +V +D+ ++PI F D +R D+V+ D A D
Sbjct: 71 SLIVGVDLAPIKPIPNCITFVEDITSDRCRSQLRGYLKTWKADVVVHDGAPNVGAAWLQD 130
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L A A E L GG F+ K F+ N+++ + K+ F KV KP +SR
Sbjct: 131 AYGQAELVLMAMKLACEFLGPGGTFVTKVFRSKDYNNLIWVFKQLFNKVEATKPPSSRNV 190
Query: 215 SVEMFLLAKGFR 226
S E+F++ +G++
Sbjct: 191 SAEIFVVCRGYK 202
>gi|259089269|ref|NP_001158672.1| ribosomal RNA methyltransferase 2 [Oncorhynchus mykiss]
gi|225705722|gb|ACO08707.1| ribosomal RNA methyltransferase 2 [Oncorhynchus mykiss]
Length = 244
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 67/215 (31%), Positives = 116/215 (53%), Gaps = 7/215 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ + + W+ R +NDP+V+ A + +R RSA+KLL+I++K+++L+ ++D G++PG
Sbjct: 26 KGKSTADQRWIVRQLNDPFVKAAHVHNYRCRSAFKLLEIDDKYKLLKPGFNVIDCGAAPG 85
Query: 80 SWSQVAARITGSNA-----NNTRVVAIDILDMEPILGVKFF-KFDFLDLDSWEFIRQAIG 133
+WSQ+A S VV ID+L + P+ G F D D + + + +
Sbjct: 86 AWSQIAVHRVNSTGANGEFPRGTVVGIDLLRIAPLDGAHFLSNHDITDPVTHAKLLELLP 145
Query: 134 GNPDLV-LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G V +SDMA G +++DH + +++ + A ++L GG + K + G +
Sbjct: 146 GAQAHVIMSDMAPNASGFKEMDHEKLITMSLSLIDLAAKVLQTGGSLICKYWDGALAHQP 205
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L F+ V VKP ASR ES E+F LA+ +R+
Sbjct: 206 QQKLSAVFRDVRTVKPKASRKESSELFFLARSYRE 240
>gi|195438774|ref|XP_002067307.1| GK16249 [Drosophila willistoni]
gi|194163392|gb|EDW78293.1| GK16249 [Drosophila willistoni]
Length = 306
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI-- 88
++ D Y + A+ EGWRARSA+KL+ I++ +I +R+VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDVYYRLAKEEGWRARSAFKLMHIDDAFKIFSGVKRVVDLCAAPGSWSQVLSRKLY 64
Query: 89 ----TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI----GGNPDLVL 140
T N +++A+D+ M PI GV + D + E I + LV+
Sbjct: 65 DTCETDEEKANVKIIAVDLQAMAPIRGVIQLQGDITKESTAEAIIEHFGEGVEQKAQLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G ++D L +A A +L GG F+ K F+G T + ++ F
Sbjct: 125 CDGAPDVTGVHEMDEYMQHQLLVSALSIATFVLEPGGSFVAKIFKGNDTTLLDSQMRTFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+ + KP++SR S+E F++ + F
Sbjct: 185 KHFEYYKPLSSRPSSIEHFVVCRDF 209
>gi|288575930|ref|ZP_05977888.2| ribosomal RNA large subunit methyltransferase J [Neisseria mucosa
ATCC 25996]
gi|288566590|gb|EFC88150.1| ribosomal RNA large subunit methyltransferase J [Neisseria mucosa
ATCC 25996]
Length = 184
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 82/187 (43%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 41 RAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSWSQVAA++ G++ RV A
Sbjct: 1 MAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSWSQVAAKLVGNS---GRVFA 57
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTM 159
+DIL M+ I GV F + DF + D + P DLV+ DMA G+ D R+
Sbjct: 58 LDILPMDEIEGVSFIQGDFRENDVLAQFETLLDDRPLDLVICDMAPNMSGNAVTDQARSF 117
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
LCE A FA+ L GG FLVK FQG + + +++ F V KP ASR S E++
Sbjct: 118 YLCELALDFAVNHLKTGGSFLVKVFQGAGYQEYMAAMREIFGIVQTRKPEASRNRSSEIY 177
Query: 220 LLAKGFR 226
LL K R
Sbjct: 178 LLGKNKR 184
>gi|256075992|ref|XP_002574299.1| ribosomal RNA methyltransferase [Schistosoma mansoni]
gi|238659500|emb|CAZ30532.1| ribosomal RNA methyltransferase, putative [Schistosoma mansoni]
Length = 300
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 11/206 (5%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN----RRIVDLGSSPGSWSQVAA 86
+R D Y + A+ EGWRARSAYKLLQI++++ I + R+VDL ++PGSWSQV +
Sbjct: 5 SRDKRDIYYRLAKEEGWRARSAYKLLQIDDEYGIFSTENTLLERVVDLCAAPGSWSQVLS 64
Query: 87 RIT-----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVL 140
+ + + ++VA+D+ M PI GV + D D+ + I + G LV+
Sbjct: 65 KRLWESKSPEDQKSVKIVAVDLQAMAPIPGVIQIQGDITSQDTAQQIIKHFDGKLAQLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L +GG F+ K F+G + + L+ F
Sbjct: 125 CDGAPDVTGLHDLDEYVQSHLILAAVTICSRVLELGGTFVAKVFRGRDSGLLGSQLRCLF 184
Query: 201 Q-KVIHVKPVASRAESVEMFLLAKGF 225
+V KP ASR S+E F++ +GF
Sbjct: 185 SGEVSFAKPRASRNSSLESFVICRGF 210
>gi|331011490|gb|EGH91546.1| ribosomal RNA large subunit methyltransferase J [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 195
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 80/187 (42%), Positives = 114/187 (60%), Gaps = 4/187 (2%)
Query: 41 RAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG WSQV +R+ G R++A
Sbjct: 1 MAQKDGYRSRASYKLLEIQEKDKLIRPGMTVIDLGAAPGGWSQVTSRLIG---GQGRLIA 57
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTM 159
DIL+M+ I V F + DF + E I +A+G DLV+SDMA G +D R M
Sbjct: 58 SDILEMDSIPDVTFIQGDFTEDKILEQILEAVGNTQVDLVISDMAPNMSGLSAVDMPRAM 117
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
LCE A A +L GGDFL+K FQG + ++K F KV KP +SR S E +
Sbjct: 118 FLCELALDLAGRVLRPGGDFLIKVFQGEGFDVYHKDIRKLFDKVQMRKPSSSRDRSREQY 177
Query: 220 LLAKGFR 226
LLA+GFR
Sbjct: 178 LLARGFR 184
>gi|15616987|ref|NP_240200.1| cell division protein FtsJ [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11387078|sp|P57463|RLME_BUCAI RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|25311069|pir||F84974 cell division protein ftsJ [imported] - Buchnera sp. (strain APS)
gi|10039052|dbj|BAB13086.1| cell division protein ftsJ [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|311087278|gb|ADP67358.1| cell division protein FtsJ [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 206
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 112/206 (54%), Gaps = 4/206 (1%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
+ + S WL H D YV+ A+ R+R+ +KL Q+++ ++I + ++DLG++P
Sbjct: 3 VQKKKHRSNRWLLEHFQDQYVKAAKKNNIRSRAWFKLEQLDKNNKIFKIGMNVIDLGAAP 62
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPD 137
GSWSQ A+ G R++A DIL + PI GV F+ DF + + +
Sbjct: 63 GSWSQYASNRIG---KKGRIIACDILPIRPITGVDIFQGDFRNKKTLNLMLNTFSNITFH 119
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
LV+SDMA G+ ID R + LC+ A + +L+ G FL+K+FQG N++ +K
Sbjct: 120 LVMSDMAPNITGNFSIDMPRIIELCKLALKISEHVLSKNGIFLLKSFQGEGFNELYKEIK 179
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAK 223
F+K+ KP SR S E+F+LA
Sbjct: 180 MLFKKIKICKPKTSRTRSREIFILAT 205
>gi|322826933|gb|EFZ31322.1| FtsJ cell division protein, putative [Trypanosoma cruzi]
Length = 910
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/215 (33%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSA+KL+Q+N K+ L R +V
Sbjct: 1 MGTKSKKKAKT----------RLDAYYRLAKDQGFRARSAFKLIQLNRKYDFLAKGRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DL ++PG W QVAA+ +++V +D++ + PI GVK F D D + + I +
Sbjct: 51 DLCAAPGGWCQVAAKHMPVG---SKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYL 107
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
P D V+ D A G D +L A A ML G F+ K F+ +
Sbjct: 108 KKEPVDCVIHDGAPNVGGVWSRDLFEQNALVLHAAKMAASMLKPSGWFVTKVFRSQDFHK 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ +LK+ F KV KP+ASR ES E+F++ GF+
Sbjct: 168 LMWVLKQLFDKVEATKPLASRMESAEIFVVCAGFK 202
>gi|307208282|gb|EFN85714.1| Putative ribosomal RNA methyltransferase 1 [Harpegnathos saltator]
Length = 361
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y +RA+ EGWRARSA+KLLQI+++ +I + +DL ++PGSWSQV A
Sbjct: 5 SKDKRDIYYRRAKEEGWRARSAFKLLQIDQECRIFNGVSKTIDLCAAPGSWSQVLALKLN 64
Query: 91 SNAN----------NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLV 139
N ++VA+D+ M P+ GV + D + ++ + I DLV
Sbjct: 65 ENYKKALEESSAASPPKIVAVDLQAMAPLEGVIQLQGDITNTNTAKEIIAHFDNTQADLV 124
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+ D A G +D L AA +L GG F+ K F+ + L+
Sbjct: 125 VCDGAPDVTGLHDMDIFIQSQLLLAALNITTHILRPGGTFVAKIFRAKDVTFLYAQLRIF 184
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F V KP +SR S+E F++ K +
Sbjct: 185 FSYVYCAKPSSSRNSSIEAFVVCKNY 210
>gi|88608723|ref|YP_506429.1| ribosomal RNA large subunit methyltransferase J [Neorickettsia
sennetsu str. Miyayama]
gi|123491814|sp|Q2GDL7|RLME_NEOSM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|88600892|gb|ABD46360.1| ribosomal RNA large subunit methyltransferase J [Neorickettsia
sennetsu str. Miyayama]
Length = 213
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 6/215 (2%)
Query: 13 LTQKVKNRSC-QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRI 71
+ K+ SS WL RH+NDP+V++A+ E +R+R+AYKLL+I+EK +++ +
Sbjct: 1 MKNKLHRVGRCTASSSRWLYRHVNDPFVKKAKAEQYRSRAAYKLLEIDEKFNLIRKGFVV 60
Query: 72 VDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
++LGS+PG WSQV A I R++A+D+ DM+PI GV+ K D E
Sbjct: 61 LELGSAPGGWSQVIADILN---GTGRLIAVDLADMDPISGVEVVKLDIELQR-KELYEYI 116
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN- 190
G D+++SD+A G R D + ++ L E +A L G + K +G
Sbjct: 117 SGVELDVIVSDLAPSASGSRVTDSISSIRLAELVLHYAKNSLKKFGTVVTKILRGSEDEY 176
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ L+K F+K+ + KP ASR S E++L+ G
Sbjct: 177 RFVNSLRKQFKKIEYFKPDASRKASREIYLILLGK 211
>gi|194290076|ref|YP_002005983.1| ribosomal RNA large subunit methyltransferase j [Cupriavidus
taiwanensis LMG 19424]
gi|226703293|sp|B3R1S2|RLME_CUPTR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|193223911|emb|CAQ69920.1| Ribosomal RNA large subunit methyltransferase J [Cupriavidus
taiwanensis LMG 19424]
Length = 221
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 117/216 (54%), Gaps = 11/216 (5%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSW
Sbjct: 3 KNKFNHSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSW 62
Query: 82 SQVAARITGSNAN------NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
SQ A + + VVAID+L MEP+ V F + DF + + + +
Sbjct: 63 SQYARNKLADSPRARDGRIDGAVVAIDLLPMEPVADVTFIQGDFREESVFRELESVVLDA 122
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
G DLVLSDMA G D R LC+ A FA L G LVK F G +
Sbjct: 123 SGGNKIDLVLSDMAPNLSGVASADAARIEYLCDLALEFAQAHLKPEGALLVKCFHGSGYS 182
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I+ K+ F+ V KP ASR +S E F+L + +
Sbjct: 183 QIVEKFKRQFKVVAKRKPKASRDKSSETFILGRYLK 218
>gi|322493017|emb|CBZ28302.1| putative FtsJ cell division protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 925
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSAYKL+Q+N K+ L +R +V
Sbjct: 1 MGVKSKKKAKT----------RLDAYYRLAKDQGYRARSAYKLIQLNRKYDFLAKSRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DL ++PG W QVAA+ +++V +D++ + PI GVK F D D + + I +
Sbjct: 51 DLCAAPGGWCQVAAQHMAIG---SKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYL 107
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
P D V+ D A G D +L A+ A ML GG F+ K F+ ++
Sbjct: 108 KKEPVDCVIHDGAPNVGGVWSRDLFDQNALVLASAKMACSMLKAGGWFVTKVFRSPDFHN 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L + K+ F+KV KP ASR ES E+F++ GF+
Sbjct: 168 LLWVFKQLFEKVEATKPQASRMESAEIFVVCAGFK 202
>gi|262094425|gb|ACY09342.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 4/192 (2%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG---SNANN 95
+ A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV + SN ++
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
++VA+D+ M + GVK + D + + E I++ G DLV+ D A G ID
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDID 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA +L GG F+ K F+G + LK F V KP +SR
Sbjct: 121 EYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDHVTVSKPRSSRNS 180
Query: 215 SVEMFLLAKGFR 226
S+E F++ + ++
Sbjct: 181 SIEAFVICQNYK 192
>gi|262094413|gb|ACY09336.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG---SNANN 95
+ A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV + SN ++
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
++VA+D+ M + GVK + D + + E I++ G DLV+ D A G ID
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDID 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA L GG F+ K F+G + LK F V KP +SR
Sbjct: 121 EYVQSQLLLAALNITTHXLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNS 180
Query: 215 SVEMFLLAKGFR 226
S+E F++ + ++
Sbjct: 181 SIEAFVICQNYK 192
>gi|116748440|ref|YP_845127.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Syntrophobacter
fumaroxidans MPOB]
gi|143461985|sp|A0LGZ0|RLME_SYNFM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|116697504|gb|ABK16692.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Syntrophobacter
fumaroxidans MPOB]
Length = 197
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 101/194 (52%), Gaps = 2/194 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
+ D Y +A+ E + AR+ YKL +I ++++IL+ R++DLG++PGSW Q A I G +
Sbjct: 5 VRDHYFHKAKKEHYLARAVYKLQEIQDRYKILKPGNRVLDLGAAPGSWMQFAREIVGPSG 64
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
V + P GV + D D + G D+VLSDMA T G R
Sbjct: 65 LVVGVDLKGVEHRFP-EGVVVLQGDVTDPE-LARSLSVEHGPFDVVLSDMAPSTSGIRVA 122
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
D R+ L E+A A L GG F+ K FQG + +L +K+ F+ V KP ASR
Sbjct: 123 DSARSALLFESALEMARSALRPGGHFVAKLFQGAEFHVLLQAVKRDFEWVKVTKPDASRK 182
Query: 214 ESVEMFLLAKGFRK 227
+S E++++ RK
Sbjct: 183 QSKEIYVIGMRLRK 196
>gi|330937938|gb|EGH41725.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 195
Score = 163 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 80/187 (42%), Positives = 114/187 (60%), Gaps = 4/187 (2%)
Query: 41 RAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
AQ +G+R+R++YKLL+I EK ++++ ++DLG++PG WSQV +R+ G R++A
Sbjct: 1 MAQKDGYRSRASYKLLEIQEKDKLIRPGMTVIDLGAAPGGWSQVTSRLIG---GQGRLIA 57
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTM 159
DIL+M+ I V F + DF + E I +A+G DLV+SDMA G +D R M
Sbjct: 58 SDILEMDSIPDVTFIQGDFTEDAILEQILEAVGNTQVDLVISDMAPNMSGLSAVDMPRAM 117
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
LCE A A +L GGDFL+K FQG + ++K F KV KP +SR S E +
Sbjct: 118 FLCELALDLAGRVLRPGGDFLIKVFQGEGFDVYHKDIRKLFDKVQMRKPSSSRDRSREQY 177
Query: 220 LLAKGFR 226
LLA+GFR
Sbjct: 178 LLARGFR 184
>gi|15791077|ref|NP_280901.1| hypothetical protein VNG2263G [Halobacterium sp. NRC-1]
gi|169236828|ref|YP_001690028.1| 23S rRNA methyltransferase [Halobacterium salinarum R1]
gi|74568838|sp|Q9HN40|RLME_HALSA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226703307|sp|B0R7G3|RLME_HALS3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|10581676|gb|AAG20381.1| cell division protein [Halobacterium sp. NRC-1]
gi|167727894|emb|CAP14682.1| 23S rRNA methyltransferase [Halobacterium salinarum R1]
Length = 259
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 104/191 (54%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y +++ EG+R+R+AYKL Q++++ +L +VDLG++PG W QVAA G+
Sbjct: 4 RKDHYYNKSKQEGYRSRAAYKLQQLDDRFDVLFGGASVVDLGAAPGGWLQVAAERAGARG 63
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
V I E G++ + D + ++ + +R A G+ D+V+SDMA G +
Sbjct: 64 KVVGVDFQSITQFETDAGLETVRGDMTEDETRQRVRDAANGSADVVVSDMAPDMTGEYDL 123
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH R++ L A A E+L+ GG F+VK F G D+L ++ F V P ASR
Sbjct: 124 DHARSVHLARQALETARELLDAGGHFVVKVFDGRDFQDLLADIEDEFAFVATHSPDASRD 183
Query: 214 ESVEMFLLAKG 224
S E++++ K
Sbjct: 184 ASSELYVVGKN 194
>gi|262094409|gb|ACY09334.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 69/192 (35%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG---SNANN 95
+ A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV + SN ++
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
++VA+D+ M + GVK + D + + E ++ G DLV+ D A G ID
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIXKEFEGLKADLVVCDGAPDVTGLHDID 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA +L GG F+ K F+G + LK F V KP +SR
Sbjct: 121 EYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNS 180
Query: 215 SVEMFLLAKGFR 226
S+E F++ + ++
Sbjct: 181 SIEAFVICQNYK 192
>gi|262094381|gb|ACY09320.1| cell division protein [Heliconius melpomene rosina]
gi|262094383|gb|ACY09321.1| cell division protein [Heliconius melpomene rosina]
gi|262094387|gb|ACY09323.1| cell division protein [Heliconius melpomene rosina]
gi|262094389|gb|ACY09324.1| cell division protein [Heliconius melpomene rosina]
gi|262094391|gb|ACY09325.1| cell division protein [Heliconius melpomene rosina]
gi|262094393|gb|ACY09326.1| cell division protein [Heliconius melpomene rosina]
gi|262094395|gb|ACY09327.1| cell division protein [Heliconius melpomene rosina]
gi|262094397|gb|ACY09328.1| cell division protein [Heliconius melpomene rosina]
gi|262094399|gb|ACY09329.1| cell division protein [Heliconius melpomene melpomene]
gi|262094403|gb|ACY09331.1| cell division protein [Heliconius melpomene melpomene]
gi|262094405|gb|ACY09332.1| cell division protein [Heliconius melpomene melpomene]
gi|262094411|gb|ACY09335.1| cell division protein [Heliconius melpomene melpomene]
gi|262094415|gb|ACY09337.1| cell division protein [Heliconius melpomene melpomene]
gi|262094417|gb|ACY09338.1| cell division protein [Heliconius melpomene melpomene]
gi|262094419|gb|ACY09339.1| cell division protein [Heliconius melpomene melpomene]
gi|262094421|gb|ACY09340.1| cell division protein [Heliconius melpomene melpomene]
gi|262094423|gb|ACY09341.1| cell division protein [Heliconius melpomene melpomene]
gi|262094427|gb|ACY09343.1| cell division protein [Heliconius melpomene rosina]
gi|262094429|gb|ACY09344.1| cell division protein [Heliconius melpomene rosina]
gi|262094431|gb|ACY09345.1| cell division protein [Heliconius melpomene rosina]
gi|262094433|gb|ACY09346.1| cell division protein [Heliconius melpomene rosina]
Length = 253
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 4/192 (2%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG---SNANN 95
+ A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV + SN ++
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
++VA+D+ M + GVK + D + + E I++ G DLV+ D A G ID
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDID 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA +L GG F+ K F+G + LK F V KP +SR
Sbjct: 121 EYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNS 180
Query: 215 SVEMFLLAKGFR 226
S+E F++ + ++
Sbjct: 181 SIEAFVICQNYK 192
>gi|317142990|ref|XP_001819235.2| ribosomal RNA large subunit methyltransferase J [Aspergillus oryzae
RIB40]
Length = 283
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 81/265 (30%), Positives = 123/265 (46%), Gaps = 47/265 (17%)
Query: 7 SSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S S+R L SS+ W R + D + + A +G ++R+A+KL+QI+ K++I +
Sbjct: 11 SRSQRALAFSPFTPKRPSSSKRWQARQLKDHFTREATAQGLKSRAAFKLIQIDAKYRIFR 70
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE 126
+ + +VDLG +PGSWSQVA TG N RV+ +DI+ +P GV + +FLD
Sbjct: 71 NGQTVVDLGYAPGSWSQVAVSRTGPN---GRVLGVDIIPAQPPKGVFTIQGNFLDPSIQA 127
Query: 127 FIRQAIGGNPDL--------------------------------------------VLSD 142
+++ + VLSD
Sbjct: 128 YVQNFLHNPTRDQQHRPGISPHVSLSHETSEDTKNPIHNCKEMEELCLTGKRTVDVVLSD 187
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
M T G DH +M LC AA F+ E+L GG F+ K +QG D+ LK+ FQK
Sbjct: 188 MMMNTSGMSFRDHAGSMDLCRAALQFSFEVLKAGGHFVCKFYQGAEDKDLEKQLKRLFQK 247
Query: 203 VIHVKPVASRAESVEMFLLAKGFRK 227
V +KP +SR ES E + + ++
Sbjct: 248 VHRLKPESSRNESKEAYFIGLARKQ 272
>gi|262094385|gb|ACY09322.1| cell division protein [Heliconius melpomene rosina]
gi|262094435|gb|ACY09347.1| cell division protein [Heliconius melpomene rosina]
Length = 253
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 4/192 (2%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG---SNANN 95
+ A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV + SN ++
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
++VA+D+ M + GVK + D + + E I++ G DLV+ D A G ID
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDID 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA +L GG F+ K F+G + LK F V KP +SR
Sbjct: 121 EYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDVTLLYSQLKLFFDXVTVSKPRSSRNS 180
Query: 215 SVEMFLLAKGFR 226
S+E F++ + ++
Sbjct: 181 SIEAFVICQNYK 192
>gi|152979916|ref|YP_001353928.1| 23S rRNA methylase [Janthinobacterium sp. Marseille]
gi|189040693|sp|A6T081|RLME_JANMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|151279993|gb|ABR88403.1| 23S rRNA methylase [Janthinobacterium sp. Marseille]
Length = 214
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 4/209 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+++WL+ HINDPYV+ AQ EG+RAR+ YKL +I+E ++++ + IVDLG++PGSW
Sbjct: 3 KNKLNKNWLHDHINDPYVKLAQKEGYRARAVYKLKEIDETEKLIKPGQIIVDLGATPGSW 62
Query: 82 SQVAARITGSN---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-D 137
SQ + N ++ +D+L MEPI V F + DF + + E + Q + G D
Sbjct: 63 SQYVRNKLSGSVGGGINGTIIGLDMLPMEPIADVHFIQGDFREQEVLEQLEQVLQGRKVD 122
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
LV+SDMA G D R + L + A F + G LVK F G + I+ +
Sbjct: 123 LVISDMAPNLSGIAVADAARMIDLIDLAIDFTQHHMKPSGSLLVKCFNGSGYSYIVEKFR 182
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V+ KP ASR +S E+FLL K +
Sbjct: 183 DEFKTVVQKKPKASRDKSSEIFLLGKTLK 211
>gi|330805936|ref|XP_003290932.1| ribosomal RNA methyltransferase [Dictyostelium purpureum]
gi|325078930|gb|EGC32556.1| ribosomal RNA methyltransferase [Dictyostelium purpureum]
Length = 253
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 8/206 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KL+QI+E++ I + +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRKAKEEGWRARSAFKLIQIDEEYSIFEDVKRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNA--NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVL 140
V +R + N ++VA+DI +M P+ GV K D ++ + I G+ DL++
Sbjct: 58 VLSRRIYGDGSDPNVKIVAVDIQEMAPLKGVVQIKGDITKYETAKQIISHFDGSLADLII 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G ID L +A + L GG F+ K F+G + + +K F
Sbjct: 118 SDGAPDVTGLHDIDFYGQSQLILSALNIVVHTLKPGGTFVAKMFKGDDMSLMFSQMKLFF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+ V VKP +SR S+E F+L K ++
Sbjct: 178 EHVSFVKPKSSRDSSLENFVLCKNYQ 203
>gi|195392525|ref|XP_002054908.1| GJ22540 [Drosophila virilis]
gi|194152994|gb|EDW68428.1| GJ22540 [Drosophila virilis]
Length = 316
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D + + A+ +GWRARSA+KLLQ +E +L+ R VDL ++PG WSQ
Sbjct: 3 KSSKD-----KRDIFYRLAKEQGWRARSAFKLLQADETFNLLEGVTRAVDLCAAPGGWSQ 57
Query: 84 VAARI-----TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-D 137
V ++ T +++A+D+ M PI GV + D ++ E I + G
Sbjct: 58 VLSKRLYEPRTPEEREQVKIIAVDMQGMAPIDGVTQLREDITKEETAEAIIKFFDGKKAQ 117
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
LV+SD A G D L +A + +L GG F+ K ++ T+D+ L+
Sbjct: 118 LVVSDGAPDVTGMHDWDAYMQAQLLLSALSISTYILEEGGSFMGKVYRAANTSDVYLQLQ 177
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ F+ V KP ASR S+E F++ + F
Sbjct: 178 RFFKDVCIFKPSASRNSSIEAFVVCRQF 205
>gi|328697206|ref|XP_001950144.2| PREDICTED: putative ribosomal RNA methyltransferase CG11447-like
[Acyrthosiphon pisum]
Length = 234
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 125/217 (57%), Gaps = 7/217 (3%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+K + SS++WL R DPYV++A+++ +R RSA+KLLQ++++ IL+ ++D+G+
Sbjct: 13 LKTFTRNHSSKEWLLRQKTDPYVEKAKIKSYRCRSAFKLLQMDDRFSILKPGLCVIDIGA 72
Query: 77 SPGSWSQVAARITGSNANNTRV-----VAIDILDMEPILGVKFF-KFDFLDLDSWEFIRQ 130
+PGSWSQVAA SNA N+ + + ID+ M PI GV DF +W+ I++
Sbjct: 73 APGSWSQVAASRINSNATNSEIPTGLLIGIDLQQMYPIEGVTLLGNSDFTSPKTWQKIKE 132
Query: 131 -AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
D+VLSDMA G + +DH + L + FA+ N+G L+K G
Sbjct: 133 LLNNRPIDVVLSDMAPNASGVKHLDHDLIIKLAYSVVKFAVLNSNVGATCLIKILDGNQN 192
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I L K + V VKP ASR++S E +LLA+GF+
Sbjct: 193 AKIENTLIKFYSNVKFVKPEASRSDSAEKYLLARGFK 229
>gi|150401023|ref|YP_001324789.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus aeolicus
Nankai-3]
gi|189040311|sp|A6UUK5|RLME_META3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150013726|gb|ABR56177.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus aeolicus
Nankai-3]
Length = 269
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 1/202 (0%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
+ W+ + ND Y + A+ +R+R++YKLLQ+NEK +I+ +VDLG +PG W Q
Sbjct: 3 KKDKRWVMQRKNDFYYKLAKQNHYRSRASYKLLQLNEKFEIIYEGDNVVDLGCAPGGWLQ 62
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM 143
+ + G + V + + + + D ++ I + D+V+ D
Sbjct: 63 ASYDLVGEDGFVIGVDLQKVKPLRE-ENIVAIQGDMTKKETINKIIDLMPSKADVVICDA 121
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G ++DH R++ L A +L G+F+VK FQG + + LL K+F+KV
Sbjct: 122 SPNISGVWEVDHSRSIELSLMALIATTHLLRKNGNFVVKVFQGSLFDQYVQLLTKYFKKV 181
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP ASR+ S E++++ K F
Sbjct: 182 QTTKPKASRSVSAEVYVIGKKF 203
>gi|66814044|ref|XP_641201.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
gi|74855831|sp|Q54VA8|RRMJ1_DICDI RecName: Full=rRNA methyltransferase 1 homolog; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 1
gi|60469225|gb|EAL67220.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
Length = 270
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 8/206 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KL+QI+E++QI + +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRKAKEEGWRARSAFKLIQIDEEYQIFEGVKRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNAN--NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVL 140
V +R + + ++VA+D+ +M P+ GV K D ++ + I G+ DL++
Sbjct: 58 VLSRRIYGDGKDPDVKIVAVDLQEMAPLKGVVQIKGDITKYETSKQIISHFDGSLADLII 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SD A G ID L +A L IGG F+ K F+G + + +K F
Sbjct: 118 SDGAPDVTGLHDIDFYGQSQLILSALNITTHTLKIGGTFVAKMFKGDDMSLMYSQMKLFF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+ V VKP +SR S+E F+L + ++
Sbjct: 178 EHVSFVKPSSSRESSLENFILCRNYQ 203
>gi|47124733|gb|AAH70677.1| LOC431876 protein [Xenopus laevis]
Length = 346
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N K Q LQ R +VDL +
Sbjct: 1 MGKKGKVGKSR-------KDKFYHLAKETGYRSRSAFKLIQLNRKFQFLQRARALVDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGN 135
+PG W QVAA+ + + ++ ID++ ++PI V + D D + +++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIIGIDLVPIKPIPNVLTLQEDITTEDCRQAVKKHLQTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A + D + L A A + L+ GG F+ K F+ +L +
Sbjct: 111 ADVVLNDGAPNVGANWTHDAFSQVHLSLMALRLACDCLSRGGWFITKIFRSSDYQSLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L++ F+KV KP ASR+ES E+F++ +GF
Sbjct: 171 LQQFFKKVNSTKPQASRSESAEIFVVCQGF 200
>gi|123476534|ref|XP_001321439.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
gi|121904265|gb|EAY09216.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
Length = 738
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D Y A+ G+R+R+A+KL+Q+N++ L +DL ++PG WSQVAA+
Sbjct: 10 KHRLDKYYHLARQVGYRSRAAFKLIQLNQQFNFLNDAHVCLDLCAAPGGWSQVAAKYMPV 69
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGH 150
A +++AID+ ++ I V + D L + + +R+ I G D+VL+D A
Sbjct: 70 GA---QIIAIDLAPIKDIPRVIALQGDILLPKTHQRVRKLIQGQKADVVLNDGAPNVGAA 126
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D + LC A+ F+ L GG F+ K F+ N +L +L + F+KV+ KP A
Sbjct: 127 WVTDSSNQLELCLASVKFSTLFLRKGGSFVTKVFRSEHYNSLLWVLSQFFEKVVPTKPKA 186
Query: 211 SRAESVEMFLLAKGFR 226
SR S E+F++A G++
Sbjct: 187 SRDSSAELFVVALGYK 202
>gi|76154918|gb|AAX26315.2| SJCHGC03585 protein [Schistosoma japonicum]
Length = 218
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-----SNRRIVDLGSSPGSWSQVA 85
+R D Y + A+ EGWRARSAYKLLQI++++ IL R+VDL ++PGSWSQV
Sbjct: 5 SRDKRDIYYRLAKEEGWRARSAYKLLQIDDEYGILSSTENIPLERVVDLCAAPGSWSQVL 64
Query: 86 ARIT-----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
++ + + ++VA+D+ M PI GV + D D+ + I + G LV
Sbjct: 65 SKRLWESKSPDDRKSVKIVAVDLQAMAPIPGVIQIQGDITSQDTAQQIIKHFSGKLAQLV 124
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+ D A G +D L AA +L +GG F+ K F+G + + L+
Sbjct: 125 VCDGAPDVTGLHDLDEYVQSHLILAALTICSRVLELGGTFVAKVFRGRDSGLLGSQLRCL 184
Query: 200 FQ-KVIHVKPVASRAESVEMFLLAKGF 225
F +V KP ASR S+E F++ +GF
Sbjct: 185 FSGQVSFAKPKASRNSSLESFVVCRGF 211
>gi|300310714|ref|YP_003774806.1| 23S rRNA methyltransferase [Herbaspirillum seropedicae SmR1]
gi|300073499|gb|ADJ62898.1| 23S rRNA methyltransferase (Cell division protein FtsJ) protein
[Herbaspirillum seropedicae SmR1]
Length = 215
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 114/209 (54%), Gaps = 4/209 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+++WL+ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG +PGSW
Sbjct: 3 KNKLNKNWLHDHINDPYVKLAQKEGYRARAAYKLKEIDEEERLIKPGQVIVDLGCTPGSW 62
Query: 82 SQVAARITG---SNANNTRVVAIDILDMEPILGVKFFKFDF-LDLDSWEFIRQAIGGNPD 137
Q + ++ +DIL M+PI V + + DF D + G D
Sbjct: 63 CQYVRNKLAGAEGGGIHGTIIGLDILPMDPIADVHYIQGDFREDEPVRQLEAVLDGRKAD 122
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
LVLSDMA G D R L + A FA + GG LVK F G N+++ +
Sbjct: 123 LVLSDMAPNLSGVAIADAARVEYLIDLAIDFAQLHMKPGGSLLVKCFNGTGYNELVHKFR 182
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V+ KP ASR +S E+FLL K +
Sbjct: 183 AEFKTVMSKKPKASRDKSSEIFLLGKILK 211
>gi|329766421|ref|ZP_08257965.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137020|gb|EGG41312.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 197
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y + A +G+R+R+AYKL Q+N ++I+ ++DLG +PG W+Q+A ++ G+
Sbjct: 7 RRDQYRKLAHEQGYRSRAAYKLKQLNHSYRIIGPGFYVLDLGCAPGGWTQMAVKLVGNK- 65
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+VV +D +E I G + + + + + + V+ D++ G+ +
Sbjct: 66 --GKVVGVDTSYVEEIPGAHIIRENIENEFLVDELLSYFERKVNAVICDLSPQVTGNWSV 123
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH +SL + + ++L G+ + K F G + + +KK F ++ KP ASR
Sbjct: 124 DHAIQISLNYSCSKIMDKVLMHKGNAIFKVFDGEYSMEFRDYIKKKFSRINLTKPEASRK 183
Query: 214 ESVEMFLLAKGF 225
+S E++ + GF
Sbjct: 184 QSSELYYVCLGF 195
>gi|90082607|dbj|BAE90485.1| unnamed protein product [Macaca fascicularis]
Length = 540
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLDDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|156102665|ref|XP_001617025.1| ribosomal RNA large subunit methyltransferase J [Plasmodium vivax
SaI-1]
gi|148805899|gb|EDL47298.1| ribosomal RNA large subunit methyltransferase J, putative
[Plasmodium vivax]
Length = 266
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 73/219 (33%), Positives = 120/219 (54%), Gaps = 12/219 (5%)
Query: 16 KVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLG 75
KV N+ SS W+ R I D YV +A+ + +R+R+AYKL++++ K+ L+ N+ I+D+G
Sbjct: 28 KVFNKKSSHSS-LWIQRQITDRYVLKAKNDNYRSRAAYKLIELDNKYMFLKKNKTILDIG 86
Query: 76 SSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL---------DLDSWE 126
PGSW QV T + +N ++ ID M+P+ + F + +L +
Sbjct: 87 CYPGSWCQVILERTKNYSN--EIIGIDKKIMDPLPNIHFIHAEIGGAKDNPNDSNLVDVK 144
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
G D++LSD A P +G++ DH+ + L T F + +N+GG ++VK + G
Sbjct: 145 LREILQGKKVDIILSDAAVPCVGNKIDDHMNSCELTLGITNFMEQYINMGGTYVVKMYLG 204
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
T+++ LK FQ V KP ASR ES E++L+ + F
Sbjct: 205 SQTDNLKTYLKTIFQFVNTTKPKASRRESREIYLVCRNF 243
>gi|21228390|ref|NP_634312.1| methyltransferase [Methanosarcina mazei Go1]
gi|74523704|sp|Q8PUP4|RLME_METMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|20906862|gb|AAM31984.1| methyltransferase [Methanosarcina mazei Go1]
Length = 268
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 115/197 (58%), Gaps = 6/197 (3%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ R D Y +A+ EG+R+R+++KL QINEKH +++ +VDLG++PG W QVA +++
Sbjct: 1 MARDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWLQVAKQLS 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYPTI 148
G +V+ +D+ ++PI GV+ + D + + I + + D+VL D A
Sbjct: 61 G-----GKVLGVDLQRIDPIEGVETIQGDINAESTIKKIIKIVGEKGADVVLCDAAPNLS 115
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+ DH R++ L +A A ++L G+F VK FQG ND L ++ +F +V P
Sbjct: 116 GNWSYDHARSIELATSALECAKKILKPKGNFAVKVFQGDMFNDYLDEVRNNFVRVKAYSP 175
Query: 209 VASRAESVEMFLLAKGF 225
ASR++S E++++ K F
Sbjct: 176 QASRSQSAEIYIIGKKF 192
>gi|312385342|gb|EFR29867.1| hypothetical protein AND_00887 [Anopheles darlingi]
Length = 308
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 65/202 (32%), Positives = 101/202 (50%), Gaps = 7/202 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y + A+ EGWRARSA+KL+ ++E + IL R VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIYYRLAKEEGWRARSAFKLIHLDETYNILDGVTRAVDLCAAPGSWSQVLSKRLY 64
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DLVLSDM 143
+ + ++VA+D+ M P+ GV + D + E I LV+ D
Sbjct: 65 LSREEKDRDEVKIVAVDLQAMGPLPGVIQLRGDITRFTTAEAIISHFDEGQKAQLVICDG 124
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
A G +D L AA +L GG F+ K F+G T+ + L+ F V
Sbjct: 125 APDVTGLHDMDEYLQSQLLLAALGITTFVLVPGGTFVAKIFRGKCTHSLYSQLRIFFDTV 184
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP +SR S+E F++ +G+
Sbjct: 185 DIAKPQSSRNSSIEAFVVCQGY 206
>gi|328711007|ref|XP_003244421.1| PREDICTED: putative ribosomal RNA methyltransferase C4F10.03c-like
[Acyrthosiphon pisum]
Length = 307
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 10/207 (4%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KL+QIN + ++L +R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRLAKEQGWRARSAFKLIQINSQFKVLDGVKRVVDLCAAPGSWSQ 57
Query: 84 VAAR---ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DL 138
V ++ + ++ ++VA+D+ M P+ GV K D + I G DL
Sbjct: 58 VLSKALYSDSDDKDDVKIVAVDLQSMAPLPGVVQLKGDITKESTANEILAQFDGGRLVDL 117
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+ D A G +D L AA +L GG F+ K F+G ++ ++ L+
Sbjct: 118 VVFDGAPDVTGLHDLDEYVQAQLLLAALNITTYLLKPGGTFIGKIFRGKDSSLLISQLEI 177
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGF 225
F V+ KP +SR S+E F++ + F
Sbjct: 178 FFGDVVVAKPCSSRNSSIESFVVCRDF 204
>gi|195060807|ref|XP_001995863.1| GH14141 [Drosophila grimshawi]
gi|193891655|gb|EDV90521.1| GH14141 [Drosophila grimshawi]
Length = 311
Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI-- 88
++ D Y ++A+ EGWRARSA+KLL I+E+ I +R VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDVYYRQAKEEGWRARSAFKLLHIHEQFSIFDGVQRAVDLCAAPGSWSQVLSRKLF 64
Query: 89 ----TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP----DLVL 140
T +++A+D+ M PI GV + D + E I G LV+
Sbjct: 65 EPCQTDDEKLAVKIIAVDLQAMAPIPGVLQIQGDITQESTAEAIIAHFGSGDDQKAQLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G ++D L +A A +L GG F+ K F + + ++ F
Sbjct: 125 CDGAPDVTGFHEMDEYMQNQLIVSALSLATCVLEPGGKFVAKIFNVTENDLLETQMRTFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
+ KP +SR S E F++ FR
Sbjct: 185 KHFHIYKPPSSRPSSYEAFVVCSDFR 210
>gi|84997481|ref|XP_953462.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304458|emb|CAI76837.1| hypothetical protein, conserved [Theileria annulata]
Length = 920
Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 11/211 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+K +S G +R D Y A+ G+R+RSA+K++Q+++K I Q+ +VDL +
Sbjct: 1 MKTKSKTGKNRL-------DKYYHLAKEHGYRSRSAFKIIQLSKKFNIFQNCNVLVDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG W QVA+ + + ++ +D++ ++PI GV F+ D I + G
Sbjct: 54 APGGWLQVASNQLPVS---STIIGVDLVPIKPIKGVTTFQADIRTPKCLSLITNHLNGMN 110
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL D + + +D L A A +L GG F+ K F+ N ++ +
Sbjct: 111 VDVVLHDGSPNMGCNWNLDAFNQNVLVLTACKMACSLLRKGGIFVTKVFRSSDYNSLVWM 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L F KV KP +SR S E+F + GF+
Sbjct: 171 LSNCFDKVKVTKPQSSRNVSAEIFAVCIGFK 201
>gi|301111504|ref|XP_002904831.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
gi|262095161|gb|EEY53213.1| ribosomal RNA methyltransferase, putative [Phytophthora infestans
T30-4]
Length = 256
Score = 161 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 8/200 (4%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT----- 89
D Y ++A+ G+RARSA+KLLQ++E+ L++ +R VDL ++PGSWSQV +R
Sbjct: 9 RDIYYRKAKEVGFRARSAFKLLQLDEQFDFLRNVQRAVDLCAAPGSWSQVLSRKLYDASN 68
Query: 90 --GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYP 146
++++ R++++D+ +M PI GV+ + D + E I G +V+SD A
Sbjct: 69 VQSVDSDDVRIMSVDLQEMAPIAGVQLLQGDITSKRTAEQIISHFHGAKAQVVVSDGAPD 128
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G ID L AA +L GG F+ K F+ + + L F+ V
Sbjct: 129 VTGVHDIDEFVQAELLAAALNITTHVLEEGGAFVAKIFRCEQYDLLATQLSVFFESVSCS 188
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP++SRA+S E F++ +GFR
Sbjct: 189 KPMSSRAQSNEAFVVCQGFR 208
>gi|159477739|ref|XP_001696966.1| hypothetical protein CHLREDRAFT_105410 [Chlamydomonas reinhardtii]
gi|158274878|gb|EDP00658.1| predicted protein [Chlamydomonas reinhardtii]
Length = 328
Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + A+ +G+R+R+A+KL+Q+N K+ L R ++DL ++PG W QVAA+
Sbjct: 12 DKFYHLAKEQGFRSRAAFKLIQLNRKYNFLGKCRTLLDLCAAPGGWLQVAAKTMPVG--- 68
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+ ++PI GVK D R+A G D+VL D A G +
Sbjct: 69 SLILGVDLAPIKPIRGVKTLVQDITTQQCRTAIKREAGGAKMDVVLHDGAPNVGGAWASE 128
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
SL + A+E L G F+ K F+ N +L + F KV KP ASR
Sbjct: 129 AYNQSSLVLDSLRLAVETLAPKGTFVTKIFRSKDYNALLYAFNQLFDKVEATKPAASRNT 188
Query: 215 SVEMFLLAKGFR 226
S E+F++ GF+
Sbjct: 189 SAEIFVVCLGFK 200
>gi|148826967|ref|YP_001291720.1| cell division protein [Haemophilus influenzae PittGG]
gi|148718209|gb|ABQ99336.1| cell division protein [Haemophilus influenzae PittGG]
Length = 195
Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
+D +VQ+A + R+R+ +K+ +I + ++ + +VDLG++PG WSQ G
Sbjct: 4 FSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGAAPGGWSQYVVSQIGGK- 62
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYPTIGHRK 152
RV+A DIL+M PI+GV F + DF D + + + D+V+SDMA G
Sbjct: 63 --GRVIACDILEMAPIVGVDFLQGDFRDENVLNALLARVGEDKVDVVMSDMAPNFSGMPS 120
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+D R M L E A ++L G F+VK FQG ++ L ++ F V KP ASR
Sbjct: 121 VDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGEGFDEYLREIRSLFNVVKVRKPEASR 180
Query: 213 AESVEMFLLAKGFR 226
S E++++A G++
Sbjct: 181 GRSREVYIVATGYK 194
>gi|73670706|ref|YP_306721.1| 23S RNA methyltransferase J [Methanosarcina barkeri str. Fusaro]
gi|121722047|sp|Q466Q1|RLME_METBF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|72397868|gb|AAZ72141.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanosarcina barkeri
str. Fusaro]
Length = 263
Score = 161 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 114/197 (57%), Gaps = 6/197 (3%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ R D Y ++A+ EG+R+R+++KL QINE+H I+ +VDLG++PG W QVA ++
Sbjct: 1 MARDRRDYYYRQAKEEGYRSRASFKLKQINERHHIINRGDSVVDLGAAPGGWLQVAKELS 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYPTI 148
G +V+ +D+ + PI GV+ + + + + I + + D+VL D A
Sbjct: 61 G-----GKVLGVDLQRIVPIEGVETIQGNINADSTIQKIIKTVGAKGADVVLCDAAPNLS 115
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+ DH R++ L +A A ++L G+F+VK FQG ND + ++ +F + + P
Sbjct: 116 GNWSYDHARSIELATSALECAKKILKPKGNFVVKVFQGDMFNDYMQKVRDNFVRTMAYSP 175
Query: 209 VASRAESVEMFLLAKGF 225
ASR++S E++++ K F
Sbjct: 176 KASRSQSAEIYVIGKKF 192
>gi|73621842|sp|Q5ZKM1|RRMJ3_CHICK RecName: Full=Putative rRNA methyltransferase 3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
Length = 832
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ +S G SR D + A+ G+R+RSA+KLLQ+N K Q LQ R ++DL +
Sbjct: 1 MGKKSKVGKSRR-------DKFYHLAKETGFRSRSAFKLLQLNRKFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVA++ + + V+ +D++ ++PI V + D + ++
Sbjct: 54 APGGWLQVASKFMPVS---SLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D +L A A E L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F KV KP ASR ES E+F++ +G++
Sbjct: 171 FQQFFHKVQATKPQASRNESAEIFVVCQGYQ 201
>gi|71396836|ref|XP_802426.1| FtsJ cell division protein [Trypanosoma cruzi strain CL Brener]
gi|70862921|gb|EAN80980.1| FtsJ cell division protein, putative [Trypanosoma cruzi]
Length = 211
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSA+KL+Q+N K+ L +R +V
Sbjct: 1 MGTKSKKKAKT----------RLDAYYRLAKDQGFRARSAFKLIQLNRKYDFLAKSRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DL ++PG W QVAA+ +++V +D++ + PI GVK F D D + + I +
Sbjct: 51 DLCAAPGGWCQVAAKHMPVG---SKIVGVDLVPIAPIRGVKTFVGDITDDKTRKMIVTYL 107
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
P D V+ D A G D +L A A ML G F+ K F+ +
Sbjct: 108 KKEPVDCVIHDGAPNVGGVWSRDLFEQNALVLHAAKMAASMLKPSGWFVTKVFRSQDFHK 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ +LK+ F KV KP+ASR ES E+F++ GF+
Sbjct: 168 LMWVLKQLFDKVEATKPLASRMESAEIFVVCAGFK 202
>gi|84489178|ref|YP_447410.1| putative 23S rRNA methylase [Methanosphaera stadtmanae DSM 3091]
gi|121697907|sp|Q2NHD6|RLME_METST RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|84372497|gb|ABC56767.1| putative 23S rRNA methylase [Methanosphaera stadtmanae DSM 3091]
Length = 206
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/200 (32%), Positives = 106/200 (53%), Gaps = 1/200 (0%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
W +H + Y + A+ + +R+R++YKL Q+++K+ +L+ + +VDLG++PG WSQV A
Sbjct: 3 RWKAKHDKEHYYKLAKKQNYRSRASYKLKQLDKKYSLLKPDYNVVDLGAAPGGWSQVVAE 62
Query: 88 ITGSNANNTRVVAI-DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
G + + + K DF ++ + I + I G D+VLSD A
Sbjct: 63 TIGEEGKGQIISVDLEYIKPIDHEAYTGVKGDFTTKETQDIIIELIDGKADVVLSDAAPK 122
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G + ID+ R L A +L G+ ++K FQG +I+ LKK F+ V
Sbjct: 123 LTGIKDIDNFRAYDLSMAVIEIIDNILKNNGNLIMKAFQGEAYQEIIKNLKKKFRNVKTT 182
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S EM+++A+GFR
Sbjct: 183 KPNSSRKRSAEMYVIARGFR 202
>gi|118404228|ref|NP_001072428.1| FtsJ homolog 3 [Xenopus (Silurana) tropicalis]
gi|113197746|gb|AAI21673.1| FtsJ homolog 3 [Xenopus (Silurana) tropicalis]
Length = 298
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + A+ G+R+RSA+KL+Q+N K Q L R +VDL ++PG W QVAA+ +
Sbjct: 11 RKDKFYHLAKETGYRSRSAFKLIQLNRKFQFLPKARALVDLCAAPGGWLQVAAKFMPIS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRK 152
+ ++ +D++ ++PI V + D + +R+ D+VL+D A +
Sbjct: 70 --SLIIGVDLVPIKPIPKVLTLQEDITTEACRQTVRKHLQTWKADVVLNDGAPNVGANWT 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + L A A + L+ GG F+ K F+ +L +L++ F+KV KP ASR
Sbjct: 128 HDAFSQVHLSLMALRLACDCLSRGGWFITKIFRSSDYQSLLWILQQFFKKVNSTKPQASR 187
Query: 213 AESVEMFLLAKGF 225
+ES E+F++ +GF
Sbjct: 188 SESAEIFVVCQGF 200
>gi|224286965|gb|ACN41184.1| unknown [Picea sitchensis]
Length = 309
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRKLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ +VAID+ M I GV + D + E + + G DLV+
Sbjct: 65 LPAKAAAQSRDEELPLIVAIDLQPMASIEGVIQVQGDITSARTAEVVIKHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L +GG F+ K F+G T+ + C LK F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAALTIVTHVLRVGGKFIAKIFRGKDTSLLYCQLKMFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP + R S+E F + + +
Sbjct: 185 STVTFAKPKSGRNSSIEAFAVCENY 209
>gi|171692335|ref|XP_001911092.1| hypothetical protein [Podospora anserina S mat+]
gi|170946116|emb|CAP72917.1| unnamed protein product [Podospora anserina S mat+]
Length = 954
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 100 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAE 159
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYP 146
++ ++ +D+ ++PI V F+ D IR D VL D A
Sbjct: 160 TMP---KDSIIIGVDLSPIKPIPKVITFQSDITTEKCRATIRTHLKTWKADCVLHDGAPN 216
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L +LK+ F KV
Sbjct: 217 VGTAWVQDSFNQAELALHSLKLATEFLIEGGAFVTKVFRSKDYNSLLWVLKQLFTKVEAT 276
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ G++
Sbjct: 277 KPPSSRNVSAEIFVVCLGYK 296
>gi|322699763|gb|EFY91522.1| AdoMet-dependent rRNA methyltransferase spb1 [Metarhizium acridum
CQMa 102]
Length = 840
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+ N + ++ +D+ ++PI V F+ D + IRQ D VL D A
Sbjct: 65 VMPVN---SLIIGVDLAPIKPIPKVITFQSDITTENCRATIRQHLKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L +L + F KV
Sbjct: 122 VGTAWAQDSFNQAELALQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVLNQLFTKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|309356401|emb|CAP37270.2| hypothetical protein CBG_20162 [Caenorhabditis briggsae AF16]
Length = 336
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 1/196 (0%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
+R D Y + A+ WRARSA+KL+QI+++ QIL+ R VDL ++PGSWSQV ++
Sbjct: 5 SRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVTRAVDLCAAPGSWSQVLSKRLY 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
++VAID+ M PI GV + D +++ + + G D+V+ D A G
Sbjct: 65 EEDEKAKIVAIDLQPMAPIPGVIQLQGDITSVETANQVIEHFSGEKADIVICDGAPDVTG 124
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA +L GG+FL K F+ ++ + +K++F++V KP
Sbjct: 125 IHSLDEFMQAELILAAFNITSHVLKNGGNFLAKIFRSRNSSLLYAQMKRYFKQVYLAKPR 184
Query: 210 ASRAESVEMFLLAKGF 225
+SR S E F+L +
Sbjct: 185 SSRQSSCEAFVLCLDY 200
>gi|297569182|ref|YP_003690526.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfurivibrio
alkaliphilus AHT2]
gi|296925097|gb|ADH85907.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfurivibrio
alkaliphilus AHT2]
Length = 197
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ + D Y ++A+ EG+ ARS YKL + +K ++L+ +++DLG PGSWS AAR+ G
Sbjct: 2 KQVQDFYFRKARKEGYPARSVYKLEEAQQKFKLLRPGDKVLDLGCQPGSWSIYAARVVGR 61
Query: 92 NANNTRV-VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
V + + F D E +R +++SDMA T G+
Sbjct: 62 QGLVVGVDITAGPIKTRGGAPFHFVLGDITRESVQEKVRGIC-SRYRVLISDMAPRTTGN 120
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
R D +++ L A L GG K F+G +++ +++ F KV KP +
Sbjct: 121 RWADQQQSLRLARTVLELAANWLQPGGHLYCKVFEGEDFQELVADVRRSFGKVKVFKPKS 180
Query: 211 SRAESVEMFLLAKGFR 226
SR ES E+FLLA ++
Sbjct: 181 SRTESREVFLLAMDYK 196
>gi|293333905|ref|NP_001168052.1| hypothetical protein LOC100381782 [Zea mays]
gi|223945719|gb|ACN26943.1| unknown [Zea mays]
Length = 298
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 7/199 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + A+ +G+R+R+A+KLLQ++ + L + R ++DL ++PG W QVA
Sbjct: 7 KQRQDKFYHLAKEQGYRSRAAFKLLQLDARFHFLPTARSVLDLCAAPGGWVQVAVNHAPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN----PDLVLSDMAYPT 147
A VV +D++ + PI G D +R+ + N D+VL D +
Sbjct: 67 GA---FVVGVDLVPIRPIRGAHSLTEDITATKCRAAVRRLMDSNGVSAFDVVLHDGSPNV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + +L A A L G F+ K F+ N I+ LK+ F+KV K
Sbjct: 124 GGAWAQEATSQSALVIDALRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQLFEKVEATK 183
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASR+ S E++++ ++
Sbjct: 184 PTASRSTSAEIYIICLKYK 202
>gi|294495192|ref|YP_003541685.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanohalophilus mahii
DSM 5219]
gi|292666191|gb|ADE36040.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanohalophilus mahii
DSM 5219]
Length = 264
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 6/197 (3%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ RH D Y RA+ EG+R+R+AYKL QIN+K +++ + +VDLG++PG W +VA +T
Sbjct: 1 MARHRRDTYYWRAKAEGYRSRAAYKLQQINKKFNVIREDSDVVDLGAAPGGWLEVARELT 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYPTI 148
+VV +DIL ++P+ + + D ++ I++A+ D V+ D A
Sbjct: 61 KR-----KVVGVDILRIKPMDRITIIRGDITREETVSQIKEAVGEDGADAVICDAAPNLS 115
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+ +DH R+++L E+A A +L G+F+VK FQG + L ++ F V P
Sbjct: 116 GNWNLDHARSIALAESALECATRILKPQGNFVVKVFQGDMFKEYLDKVRGEFTYVRAHSP 175
Query: 209 VASRAESVEMFLLAKGF 225
ASR+ES E++++ K F
Sbjct: 176 EASRSESAEIYVVGKKF 192
>gi|209883044|ref|XP_002142954.1| rRNA (uridine-2'-O-)-methyltransferase 3 [Cryptosporidium muris
RN66]
gi|209558560|gb|EEA08605.1| rRNA (uridine-2'-O-)-methyltransferase 3, putative [Cryptosporidium
muris RN66]
Length = 920
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 105/196 (53%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y A+ +G+RARSA+KL+Q+ +K+ I ++ + +VDL ++PG W QVA R G
Sbjct: 9 KDRLDRYYHLAKEQGYRARSAFKLIQLAQKYDIFKNCQVLVDLCAAPGGWLQVAKRHMGV 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLVLSDMAYPTIGH 150
+ ++++ +D++ ++ I GV FK D + I + G + D+VL D A
Sbjct: 69 S---SKIIGVDLVSIKSIPGVTTFKCDITTEQCKKLILNNLEGLSVDVVLHDGAPNVGTS 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L +T A ++L GG F+ K F+ N ++ +L + F+ V KP +
Sbjct: 126 WNRDAYIQNELVVHSTKLACDILRPGGIFITKIFRSSDYNSLIWVLNQLFKTVRATKPQS 185
Query: 211 SRAESVEMFLLAKGFR 226
SR S E+FL+ ++
Sbjct: 186 SRNVSAEIFLVCLDYK 201
>gi|91089457|ref|XP_968154.1| PREDICTED: similar to cell division protein ftsj [Tribolium
castaneum]
gi|270012568|gb|EFA09016.1| hypothetical protein TcasGA2_TC006724 [Tribolium castaneum]
Length = 228
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/210 (35%), Positives = 124/210 (59%), Gaps = 7/210 (3%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS +WL+R + DPYV++A++ +R RSA+KLL+I+++ +IL+ ++D G++PGSWSQ
Sbjct: 15 ASSHEWLSRQLTDPYVEKAKIMNYRCRSAFKLLEIDDRFKILRPGFVVIDCGAAPGSWSQ 74
Query: 84 VAARITGSNANNTR-----VVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQAIGGNP- 136
VA R S+ ++ + V++ID + I G DF D+ S E + + +GG
Sbjct: 75 VAVRRVNSDGSDPKQAQGLVLSIDKQQIFAINGATILGNLDFTDVKSQEILVEVLGGKKA 134
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
D V+SDMA G +++D+ + LC + FA++ G +VK +Q G +
Sbjct: 135 DAVISDMAPNASGFKELDNENIIKLCYSVLRFAVQNSRAGACLVVKLWQCGQAKQLENDF 194
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K + V +VKP +SR++S E+FLL + F+
Sbjct: 195 SKFYASVKYVKPNSSRSDSAEIFLLGRDFK 224
>gi|288559850|ref|YP_003423336.1| ribosomal RNA large subunit methyltransferase J RrmJ
[Methanobrevibacter ruminantium M1]
gi|288542560|gb|ADC46444.1| ribosomal RNA large subunit methyltransferase J RrmJ
[Methanobrevibacter ruminantium M1]
Length = 213
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 1/200 (0%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
W DPY +RA+ E +R+R++YKL Q+++K++I++ +VDLG++PG WSQVA
Sbjct: 4 RWQVEKKKDPYYRRAKSEEYRSRASYKLKQLDKKYKIIKEGNTVVDLGAAPGGWSQVALE 63
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPT 147
G V I + DF + I + G +++SD A
Sbjct: 64 KVGEEGIVVGVDLNRIKPFPE-KNFYGIRGDFTKEIVQDKIMELTNGKAKVLISDAAPSL 122
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + IDHL ++ L E A +L G+ ++K FQG +L +K+ F+KV K
Sbjct: 123 TGIKTIDHLNSVDLVETVIKIADNILETEGNMVIKAFQGPEYKRLLDEIKQDFRKVKSTK 182
Query: 208 PVASRAESVEMFLLAKGFRK 227
P +SR S EM+++ G+RK
Sbjct: 183 PPSSRHRSKEMYIVGLGYRK 202
>gi|262094401|gb|ACY09330.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 4/191 (2%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG---SNANN 95
+ A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV + SN ++
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
++VA+D+ M + GVK + D + + E I++ G DLV+ D A G ID
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTAHEIIKEFEGLKADLVVCDGAPDVTGLHDID 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA L GG F+ K F+G + LK F V KP +SR
Sbjct: 121 EYVQSQLLLAALNITTHXLKEGGVFVAKIFRGKDVTLLYSQLKLFFDYVTVSKPRSSRNS 180
Query: 215 SVEMFLLAKGF 225
S+E F++ + +
Sbjct: 181 SIEAFVICQNY 191
>gi|94264071|ref|ZP_01287870.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [delta proteobacterium
MLMS-1]
gi|93455487|gb|EAT05677.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [delta proteobacterium
MLMS-1]
Length = 199
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 2/197 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ + D Y RA+ EG+ ARS YKL++ +K ++L+ R++DLG PG WS AA G+
Sbjct: 2 KQVQDHYYHRAKKEGYPARSVYKLIEAQQKFRLLRPGDRVLDLGCQPGGWSMFAAEQVGA 61
Query: 92 NANNTRVVAI-DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
V + F D +R+ ++LSDMA T G+
Sbjct: 62 RGLVVGVDLNPGPIRPRKGAPFHFVLGDINRESVLARVREITPD-YTVLLSDMAPRTTGN 120
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
R D +++ L A E+L GG+F K F+G +++ ++ F KV KP +
Sbjct: 121 RWADQQQSLRLAREVLRLAGELLAAGGNFYCKVFEGEDFQELVADCRQRFAKVKIFKPKS 180
Query: 211 SRAESVEMFLLAKGFRK 227
SRAES E+F+L ++
Sbjct: 181 SRAESREVFVLGLKHKQ 197
>gi|195398799|ref|XP_002058008.1| GJ15847 [Drosophila virilis]
gi|194150432|gb|EDW66116.1| GJ15847 [Drosophila virilis]
Length = 831
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + Q A+ G+R+R+A+KL+Q+N K LQ ++ +DL ++PG W QVA + +
Sbjct: 11 RKDKFYQLAKETGFRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D+ + PI G D + ++ D+VL D A +
Sbjct: 70 --SIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKVDVVLHDGAPNVGRNWL 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + + L A L GG F+ K F+ N +L +LK+ F+KV KP ASR
Sbjct: 128 YDAYQQICLTLNALKLGTHFLRGGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASR 187
Query: 213 AESVEMFLLAKGF 225
ES E+F++ +G+
Sbjct: 188 KESAEIFVVCQGY 200
>gi|268575120|ref|XP_002642539.1| Hypothetical protein CBG20162 [Caenorhabditis briggsae]
Length = 331
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 1/196 (0%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
+R D Y + A+ WRARSA+KL+QI+++ QIL+ R VDL ++PGSWSQV ++
Sbjct: 5 SRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVTRAVDLCAAPGSWSQVLSKRLY 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
++VAID+ M PI GV + D +++ + + G D+V+ D A G
Sbjct: 65 EEDEKAKIVAIDLQPMAPIPGVIQLQGDITSVETANQVIEHFSGEKADIVICDGAPDVTG 124
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA +L GG+FL K F+ ++ + +K++F++V KP
Sbjct: 125 IHSLDEFMQAELILAAFNITSHVLKNGGNFLAKIFRSRNSSLLYAQMKRYFKQVYLAKPR 184
Query: 210 ASRAESVEMFLLAKGF 225
+SR S E F+L +
Sbjct: 185 SSRQSSCEAFVLCLDY 200
>gi|300709773|ref|YP_003735587.1| ribosomal RNA large subunit methyltransferase J [Halalkalicoccus
jeotgali B3]
gi|299123456|gb|ADJ13795.1| ribosomal RNA large subunit methyltransferase J [Halalkalicoccus
jeotgali B3]
Length = 251
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y +A+ +G+R+R+AYKL Q++E +L R+VDLG++PG W QVA+ G
Sbjct: 4 KDEYYNKAKQQGYRSRAAYKLQQLDEMEDLLSHGDRVVDLGAAPGGWLQVASERVG---- 59
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V+ +D+ ++ + GV+ K D D + I + I G D VLSDMA G +D
Sbjct: 60 TGTVIGVDLQRIDSLEGVETIKGDMTDEGTRGEIIERI-GEADTVLSDMAPNMTGEYSLD 118
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ L A A E+L GGD +VK F+G + + ++ F+ V P ASR E
Sbjct: 119 QARSVHLARQAFETAREILTPGGDLVVKVFEGRDLDALRDDMEAEFEYVRTTSPAASREE 178
Query: 215 SVEMFLLAKGF 225
S E++L+AKGF
Sbjct: 179 SSEVYLIAKGF 189
>gi|46580665|ref|YP_011473.1| ribosomal RNA large subunit methyltransferase J [Desulfovibrio
vulgaris str. Hildenborough]
gi|120602033|ref|YP_966433.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio vulgaris
DP4]
gi|81566318|sp|Q729T9|RLME_DESVH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|158513904|sp|A1VC40|RLME_DESVV RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|46450084|gb|AAS96733.1| ribosomal RNA large subunit methyltransferase J [Desulfovibrio
vulgaris str. Hildenborough]
gi|120562262|gb|ABM28006.1| 23S rRNA Um-2552 2'-O-methyltransferase [Desulfovibrio vulgaris
DP4]
gi|311234393|gb|ADP87247.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio vulgaris
RCH1]
Length = 204
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +A+ E + ARS YKL +I+ + +I + +++DLG++PGSWS AA G
Sbjct: 2 KKYRDHYFLKAKQENYPARSVYKLKEIDNRFKIFRQGMKVLDLGAAPGSWSLGAAEKVGP 61
Query: 92 NANNTRVVAIDILDMEPIL--GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
RV+A D+ + + + V F + + + D+V+SDMA T G
Sbjct: 62 ---RGRVLACDLQETDTVFPDNVTFMQENVFERSEAFENLLDEIAPFDVVISDMAPRTTG 118
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
R D R++ LC A A L GG F+VK F G +++ +++ F V KP
Sbjct: 119 TRFTDQARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAMRQRFSAVKSFKPK 178
Query: 210 ASRAESVEMFLLAKGFR 226
+SRAES E F + G+R
Sbjct: 179 SSRAESKETFYVCLGYR 195
>gi|121713778|ref|XP_001274500.1| rRNA methyltransferase Spb1, putative [Aspergillus clavatus NRRL 1]
gi|119402653|gb|EAW13074.1| rRNA methyltransferase Spb1, putative [Aspergillus clavatus NRRL 1]
Length = 796
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+ + +V +D+ ++PI V F+ D IRQ D VL D A
Sbjct: 65 CMPT---QSIIVGVDLAPIKPIPRVITFQSDITTEKCRATIRQHLKHWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGTAWVQDAFSQAELVLQSMKLATEFLAEGGTFVTKVFRSKDYNPLLWVFKQLFTSVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|148642568|ref|YP_001273081.1| cell division protein J (23S rRNA methylase), FtsJ
[Methanobrevibacter smithii ATCC 35061]
gi|158513776|sp|A5UKI5|RLME_METS3 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|148551585|gb|ABQ86713.1| cell division protein J (23S rRNA methylase), FtsJ
[Methanobrevibacter smithii ATCC 35061]
Length = 210
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 1/198 (0%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
W +DPY ++A+ E +R+R++YK+ Q+++K ++++ +VDLG++PG WSQVA
Sbjct: 4 RWQMEKKHDPYYKKAKKEDYRSRASYKIKQLDKKFKLIKEGDTVVDLGAAPGGWSQVALE 63
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPT 147
G V I + DF + E + IGG +V+SD +
Sbjct: 64 KVGEEGLVIGVDLNRIKPFPE-ENFHGIRGDFTTTEVQEKVMNLIGGKAKVVISDASPSL 122
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + ID LR++ L A +L G+ ++K FQG D+L LKK +++V K
Sbjct: 123 CGIKNIDQLRSIDLTNTVIGIADNILEPKGNLVMKVFQGPEYKDMLTRLKKKYRQVKTTK 182
Query: 208 PVASRAESVEMFLLAKGF 225
P +SR +S EM+++ F
Sbjct: 183 PPSSRKKSSEMYVVGLDF 200
>gi|303252225|ref|ZP_07338393.1| 23S rRNA methyltransferase J [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|302649008|gb|EFL79196.1| 23S rRNA methyltransferase J [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
Length = 179
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 4/180 (2%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R+R+ +KL +I + ++ + +VDLG++PG WSQ A GS R++A DILDM
Sbjct: 2 RSRAYFKLDEIQQTDRLFKPGMTVVDLGAAPGGWSQYAVTQIGSK---GRIIACDILDMN 58
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
PI+GV F + DF + + + +G + D+V+SDMA G +D R M L E A
Sbjct: 59 PIVGVDFLQGDFREESVLNALLERVGDDMVDVVMSDMAPNFSGMPSVDIPRAMYLVELAL 118
Query: 167 FFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L G F+VK FQG +D L ++ F V KP ASR S E++++A G++
Sbjct: 119 DMCRQVLAPKGSFVVKVFQGEGFDDYLRDIRAMFTTVKVRKPEASRDRSREVYIVATGYK 178
>gi|60417326|emb|CAI51686.1| putative ribosomal RNA methyltransferase 2 [Nyctotherus ovalis]
Length = 202
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 124/202 (61%), Gaps = 1/202 (0%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
+SR W+ RH+ D +V+ ++ +R+R+A+KL+ I+ KH +++ R+V++GS+PGSW+Q
Sbjct: 1 KASRQWMRRHVRDTFVKASRQMNYRSRAAFKLIDIDSKHGLMKPGMRVVEIGSAPGSWTQ 60
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSD 142
V R S + + VVA+D+L M+P+ G F + L + E I +A+GG LV SD
Sbjct: 61 VIVRQVRSTSASPTVVAVDVLKMKPVSGAVFVEGSILARKTHEEIERALGGEKAGLVCSD 120
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A +G D T+ L A A++ L GG+FL+K QG ++ +K+HF
Sbjct: 121 AAPEFVGEGDADQEATIQLNYAVLNSAVKYLKNGGNFLMKVMQGWIEKEMKVEIKRHFDS 180
Query: 203 VIHVKPVASRAESVEMFLLAKG 224
+ +VKP ASRA+S E+++LAKG
Sbjct: 181 LSYVKPPASRADSREIYILAKG 202
>gi|296415586|ref|XP_002837467.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633339|emb|CAZ81658.1| unnamed protein product [Tuber melanosporum]
Length = 528
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKQKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYP 146
N + +V +D+ ++ I V F+ D D VL D A
Sbjct: 65 CMPVN---SLIVGVDLAPIKAIPRVITFQSDITTDKCRATLRGHLKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A + L GG F+ K F+ N+++ + + F KV
Sbjct: 122 VGTAWVQDAFTQAELVLQSLKLATKFLIEGGTFVTKVFRSRDFNNLMWVFNQLFTKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR+ S E+F++ KG++
Sbjct: 182 KPPSSRSVSAEIFVVCKGYK 201
>gi|298709155|emb|CBJ31099.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1004
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
D Y + A+ +G+RARSA+KL++IN+K+ L S + +DL ++PG W QVAA+
Sbjct: 8 QDRDKYYRLAKDQGFRARSAFKLIEINKKYDFLSSAKVCIDLCAAPGGWCQVAAKHMPRG 67
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ ++ +D+L + PI VK D + R+ D+VL D A
Sbjct: 68 ---SIILGVDLLPIRPIPNVKTLVHDITTDECRTALKREMQTWKADVVLCDGAPNVGTAY 124
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
K D + A A + L GG F+ K ++ N ++ ++++ F++ VKP +S
Sbjct: 125 KKDAYEQNEIALHALRVATQHLKKGGTFVTKVYRSQDYNSLMWVIQQFFEEHQAVKPASS 184
Query: 212 RAESVEMFLLAKGFR 226
R++S E+F++ + ++
Sbjct: 185 RSQSAEIFVVGRNYK 199
>gi|262094407|gb|ACY09333.1| cell division protein [Heliconius melpomene melpomene]
Length = 253
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG---SNANN 95
+ A+ EGWRARSA+KLLQINE++ I + R VDL ++PGSWSQV + SN ++
Sbjct: 1 YRLAKEEGWRARSAFKLLQINEEYNIFEGVLRAVDLCAAPGSWSQVLTKKLRQNTSNTDD 60
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
++VA+D+ M + GVK + D + + E I++ G DLV+ D A G ID
Sbjct: 61 VKIVAVDLQAMAALPGVKQIQGDITKISTXHEIIKEFEGLKADLVVCDGAPDVTGLHDID 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA +L GG F+ K F+G + LK F V KP +SR
Sbjct: 121 EYVQSQLLLAALNITTHVLKEGGVFVAKIFRGKDXTLLYSQLKLFFDYVTVSKPRSSRNS 180
Query: 215 SVEMFLLAKGF 225
S+E F++ + +
Sbjct: 181 SIEAFVICQNY 191
>gi|301123027|ref|XP_002909240.1| rRNA methyltransferase, putative [Phytophthora infestans T30-4]
gi|262100002|gb|EEY58054.1| rRNA methyltransferase, putative [Phytophthora infestans T30-4]
Length = 881
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 109/196 (55%), Gaps = 4/196 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
+H D Y A+ +G+RARSA+KL+Q+N+K+ L + + +DL ++PG W QVAA+
Sbjct: 5 KKHDKDKYYNLARQQGYRARSAFKLIQLNKKYDFLSTAKVCIDLCAAPGGWCQVAAKYMP 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIG 149
++ + ++ ID+L + PI GVK F+ D + + I+ + D+VL D A
Sbjct: 65 AS---SIILGIDLLPIRPIRGVKTFQCDITTVRCRQIIKQEMQSWQADVVLCDGAPNVGT 121
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
D L A A++++ GG F+ K F+ N +L + K+ F+KV KP+
Sbjct: 122 EYSKDAYVQNELALIALKLAVDVMGRGGTFVSKVFRSQDYNALLWVFKQLFKKVSATKPL 181
Query: 210 ASRAESVEMFLLAKGF 225
+SR ES E+F++ + F
Sbjct: 182 SSRNESAEIFVVCEQF 197
>gi|206598233|gb|ACI16035.1| ribosomal RNA methyltransferase [Bodo saltans]
Length = 321
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 2/197 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y ++A+ EG+RARSAYKLLQI+E+ + + + VDL ++PGSWSQV
Sbjct: 5 SKDKRDMYYRKAKEEGYRARSAYKLLQIDEELDVFTNVTKAVDLCAAPGSWSQVLTAKLP 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
R+VA+D+ +M PI GV + D + + +G +LV+ D A G
Sbjct: 65 QTPER-RIVAVDLQEMAPIAGVVCIQGDITTEKTANEVIGRLGDVKAELVICDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
++D L AA +L GG F+ K F+G T ++ + F+ V+ +KP
Sbjct: 124 LHELDEYVQHQLLLAALNITTFVLAPGGTFVTKMFRGPNTPFLVAKSEMFFENVMIMKPK 183
Query: 210 ASRAESVEMFLLAKGFR 226
+SR S+E F++ + FR
Sbjct: 184 SSRNASMEAFMVCQNFR 200
>gi|156836549|ref|XP_001642330.1| hypothetical protein Kpol_251p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156112834|gb|EDO14472.1| hypothetical protein Kpol_251p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 313
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 68/211 (32%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ--SNRRIVDLGSSPGSW 81
SS+D D Y ++A+ +G+RARSA+KLLQ+NE+ L + +R+VDL ++PGSW
Sbjct: 3 KSSKD-----KRDLYYRKAKEQGYRARSAFKLLQLNEQFHFLDDPNLKRVVDLCAAPGSW 57
Query: 82 SQVAARIT------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN 135
SQV +R N + +++A+D+ M PI V + D + I + G
Sbjct: 58 SQVLSRKLFTEDPDKENTKDKKIIAVDLQPMSPIDNVITLQADITHPKTLAKILELFGNE 117
Query: 136 P-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D V SD A G +D L +A +L GG F+ K F+G + +
Sbjct: 118 KADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTTCILKTGGTFIAKIFRGRDIDLLYS 177
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L F++VI KP +SR S+E F++ +
Sbjct: 178 QLGFLFKRVICAKPRSSRGTSLEAFIVCMDY 208
>gi|332701181|ref|ZP_08421269.1| Ribosomal RNA large subunit methyltransferase E [Desulfovibrio
africanus str. Walvis Bay]
gi|332551330|gb|EGJ48374.1| Ribosomal RNA large subunit methyltransferase E [Desulfovibrio
africanus str. Walvis Bay]
Length = 208
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y ++A+ + + ARS YKL +IN++ IL+ ++++DLG++PGSW+ AA++ G
Sbjct: 2 KKYQDHYFKQAKKDNYPARSVYKLQEINKRFGILRPGQKVLDLGAAPGSWTLFAAKVVGQ 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
V P V+F D + + D+V+SDMA T G
Sbjct: 62 GGKVLGVDLQSTSTDFP-DNVRFLVGDVFEPPAEVQAAMEELAPFDVVVSDMAPKTSGII 120
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D + LC A A + L GG+F+ K F+G +L++ F V + KP +S
Sbjct: 121 FRDQAFSFDLCVRALEVADKYLAKGGNFVAKIFEGPDVRQFAAMLRERFVTVKNFKPQSS 180
Query: 212 RAESVEMFLLAKGFR 226
R+ES E F + GF+
Sbjct: 181 RSESKETFYIGLGFK 195
>gi|325958289|ref|YP_004289755.1| Ribosomal RNA large subunit methyltransferase E [Methanobacterium
sp. AL-21]
gi|325329721|gb|ADZ08783.1| Ribosomal RNA large subunit methyltransferase E [Methanobacterium
sp. AL-21]
Length = 204
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 114/201 (56%), Gaps = 1/201 (0%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
+ W + + Y + A+ + +R+R++YKL Q+N++ +++++ ++VDLG++PG WSQ+A
Sbjct: 3 KKWNSERKTEHYYKMAKKQNYRSRASYKLQQLNKRFKVIKAADKVVDLGAAPGGWSQIAL 62
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
G V ++ + + DF ++ + ++ I G +V+SD A
Sbjct: 63 EAVGEEGTVVGVD-LEWIRPLDEENFHTVRGDFTKDETLKEVKDLINGTAQVVISDAAPK 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G + ID +R+ L + A +L GG+F++K FQG ++I+ +K+ F+ V
Sbjct: 122 LTGIKDIDTIRSTDLADNALTVCDHVLMQGGNFVLKVFQGVEYDNIIKNIKERFKVVKTT 181
Query: 207 KPVASRAESVEMFLLAKGFRK 227
KP +SR SVEM+++AKGFR+
Sbjct: 182 KPPSSRKASVEMYVVAKGFRR 202
>gi|220903814|ref|YP_002479126.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219868113|gb|ACL48448.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 223
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y +A+ E + ARS YKL +++ K ++L+ ++I+DLG++PGSWS AA
Sbjct: 13 IMKEYRDHYFLKAKRENYPARSVYKLKELDAKFRLLRPGQKILDLGAAPGSWSLGAAEKV 72
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
GS I + V F + D + R G D V+SDMA T G
Sbjct: 73 GSRG-LVLACDIQSTETAFPPQVIFMQEDVFNRSPAFEARLEELGPFDHVISDMAPRTTG 131
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
R D R++ L A A L GG F+VK F G ++L ++K F V KP
Sbjct: 132 TRFTDQARSLDLAVEALAVACLHLKQGGGFVVKIFMGPDVQELLAPMRKAFTTVKSFKPK 191
Query: 210 ASRAESVEMFLLAKGFR 226
+SRAES E F + GFR
Sbjct: 192 SSRAESKETFFVGLGFR 208
>gi|221060839|ref|XP_002261989.1| ribosomal RNA methyltransferase [Plasmodium knowlesi strain H]
gi|193811139|emb|CAQ41867.1| ribosomal RNA methyltransferase, putative [Plasmodium knowlesi
strain H]
Length = 266
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 74/219 (33%), Positives = 121/219 (55%), Gaps = 12/219 (5%)
Query: 16 KVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLG 75
KV N+ SS+ W+ R I D YV +A+ + +R+R+AYKL++++ K+ L+ N+ I+D+G
Sbjct: 28 KVLNKKSSHSSQ-WIQRQITDRYVLKAKNDNYRSRAAYKLIELDNKYMFLKKNKIILDIG 86
Query: 76 SSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL---------DLDSWE 126
PGSW QV T + +N ++ ID M+P+ + F + +L +
Sbjct: 87 CYPGSWCQVILERTKNYSN--EIIGIDKKIMDPLPNIHFIHAEIGGAKDSTNHNNLVDVK 144
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
G D++LSD A P +G++ DHL + L T F + +N+GG ++VK + G
Sbjct: 145 LREILQGKKVDIILSDAAVPCVGNKIDDHLNSCELTLGITNFMEQYINMGGTYVVKMYLG 204
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
T+++ LK FQ V KP ASR ES E++L+ + F
Sbjct: 205 SQTDNLKTYLKTIFQFVNTTKPKASRRESREVYLVCRNF 243
>gi|312082095|ref|XP_003143302.1| hypothetical protein LOAG_07721 [Loa loa]
gi|307761535|gb|EFO20769.1| hypothetical protein LOAG_07721 [Loa loa]
Length = 602
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y A+ G+R+R+A+KLLQ+N++ + LQ +R +VDL ++PG W QVA +
Sbjct: 7 IGKQRRDKYYHLAKEAGYRSRAAFKLLQLNKRFEFLQKSRAVVDLCAAPGGWLQVATQNM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-IRQAIGGNPDLVLSDMAYPTI 148
++ V + ++PI + D + + ++ G D VL D A
Sbjct: 67 PVSSLCIGVDLV---PIKPINRCVTLQGDITAEKTRQMVRKELRGWEADCVLHDGAPNIG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+ D + L +A A ++L G F+ K F+ + ++ + +K F++V KP
Sbjct: 124 RNWVQDAFQQNCLTLSALKLATQILAKNGIFVTKVFRSSDYHHLISVFEKLFRQVHVWKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ + +
Sbjct: 184 AASRLESAEIFVVCEKY 200
>gi|10120640|pdb|1EIZ|A Chain A, Ftsj Rna Methyltransferase Complexed With S-
Adenosylmethionine
gi|10120641|pdb|1EJ0|A Chain A, Ftsj Rna Methyltransferase Complexed With S-
Adenosylmethionine, Mercury Derivative
Length = 180
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 4/182 (2%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD 105
G R+R+ +KL +I + ++ + +VDLG++PG WSQ G R++A D+L
Sbjct: 1 GLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGK---GRIIACDLLP 57
Query: 106 MEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
M+PI+GV F + DF D + + + + +V+SDMA G +D R M L E
Sbjct: 58 MDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVEL 117
Query: 165 ATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
A ++L GG F+VK FQG ++ L ++ F KV KP +SRA S E++++A G
Sbjct: 118 ALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATG 177
Query: 225 FR 226
+
Sbjct: 178 RK 179
>gi|322706026|gb|EFY97608.1| AdoMet-dependent rRNA methyltransferase spb1 [Metarhizium
anisopliae ARSEF 23]
Length = 840
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+ N + +V +D+ ++PI V F+ D + IRQ D VL D A
Sbjct: 65 VMPMN---SLIVGVDLAPIKPIPRVITFQSDITTENCRATIRQHLKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L +L + F KV
Sbjct: 122 VGTAWAQDSFNQAELALQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVLNQLFTKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|189207701|ref|XP_001940184.1| AdoMet-dependent rRNA methyltransferase spb-1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976277|gb|EDU42903.1| AdoMet-dependent rRNA methyltransferase spb-1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 835
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVA+
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYP 146
+ + ++ +V +D+ ++PI F+ D + D VL D A
Sbjct: 65 VMPA---HSLIVGVDLAPIKPIPRCITFQSDITTDKCRATLRQHLKHLKCDTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + + F KV
Sbjct: 122 VGTAWVQDAFTQAELVLQSMKLATEFLAEGGTFVTKIFRSKDYNSLLWVFNQLFAKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +G++
Sbjct: 182 KPPSSRNVSAEIFVVCRGYK 201
>gi|47208174|emb|CAF94129.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 63/217 (29%), Positives = 109/217 (50%), Gaps = 8/217 (3%)
Query: 17 VKN-RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLG 75
+KN + + + W+ R DPYV+ + + R RSA+KLL+++++ +L+ +VD G
Sbjct: 13 MKNLKGKTHAEQRWMLRQRKDPYVKASHSQNLRCRSAFKLLEMDDRFHLLRPGYSVVDCG 72
Query: 76 SSPGSWSQVAARITGSNA-----NNTRVVAIDILDMEPILGVKFFKFDFLDLDS--WEFI 128
++PG+WSQVA R S V+ ID+L++ P+ G F + + + +
Sbjct: 73 AAPGAWSQVAVRRVNSAGAEPESPIGTVIGIDLLNIPPLDGAHFLSSHDVTDPTTHAKIL 132
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
G ++LSDMA G + +DH R +++C A + L GG + K ++G
Sbjct: 133 ELLPSGQAHVILSDMAPNASGFKDMDHERLVTMCFCLLDLAEKTLRPGGSLVCKYWEGAL 192
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ L F V +KP ASR +S E + A+ +
Sbjct: 193 AQKLQDKLSSVFGSVRTLKPSASRKDSAEKYFFARMY 229
>gi|320593636|gb|EFX06045.1| rRNA methyltransferase [Grosmannia clavigera kw1407]
Length = 858
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+N + +V +D+ ++ I V F+ D IRQ D VL D A
Sbjct: 65 TMPAN---SIIVGVDLSPIKSIPKVITFQSDITTEKCRATIRQHLKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L A A + L GG F+ K F+ N +L + + F KV
Sbjct: 122 VGTAWVQDSFNQAELALQAMKLATDFLIEGGTFVTKVFRSKDYNSLLWVFNQLFTKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|326933959|ref|XP_003213065.1| PREDICTED: putative rRNA methyltransferase 3-like [Meleagris
gallopavo]
Length = 811
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 4/194 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + A+ G+R+RSA+KLLQ+N K Q LQ R ++DL ++PG W QVA++ +
Sbjct: 11 RRDKFYHLAKETGFRSRSAFKLLQLNRKFQFLQKARALLDLCAAPGGWLQVASKFMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D++ ++PI V + D + ++ D+VL+D A
Sbjct: 70 --SLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGSSWV 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D +L A A E L GG F+ K F+ +L + ++ F KV KP ASR
Sbjct: 128 HDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLLWIFQQFFHKVQATKPQASR 187
Query: 213 AESVEMFLLAKGFR 226
ES E+F++ +G++
Sbjct: 188 NESAEIFVVCQGYQ 201
>gi|161528903|ref|YP_001582729.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosopumilus maritimus
SCM1]
gi|226705297|sp|A9A3M9|RLME_NITMS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|160340204|gb|ABX13291.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosopumilus maritimus
SCM1]
Length = 197
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 55/192 (28%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y + A +G+R+R+AYKL ++N+ ++I+ ++DLG +PG W+Q+A ++ G
Sbjct: 7 RKDHYRKLAHEQGFRSRAAYKLKELNQSYRIIGPGFYVLDLGCAPGGWTQMAIKLAG--- 63
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
N +V+ ID+ +E I G + + D D + + + + V+ D++ G+ +
Sbjct: 64 NQGKVMGIDLSYVEEIPGAEILRGDIEDENVVDDVMNYFERKVNAVICDLSPKVSGNWSV 123
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH + +SL T ++L G+ + K F G + + +KK F ++ KP ASR
Sbjct: 124 DHAKQISLNYDCTKIMDKVLAHKGNAVFKVFDGEYSMEFRDYVKKKFARINLTKPKASRK 183
Query: 214 ESVEMFLLAKGF 225
+S E++ + GF
Sbjct: 184 QSSELYYVCLGF 195
>gi|330916102|ref|XP_003297295.1| hypothetical protein PTT_07642 [Pyrenophora teres f. teres 0-1]
gi|311330112|gb|EFQ94603.1| hypothetical protein PTT_07642 [Pyrenophora teres f. teres 0-1]
Length = 835
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVA+
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYP 146
+ + ++ +V +D+ ++PI F+ D + D VL D A
Sbjct: 65 VMPA---HSLIVGVDLAPIKPIPRCITFQSDITTDKCRATLRQHLKHLKCDTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + + F KV
Sbjct: 122 VGTAWVQDAFTQAELVLQSMKLATEFLAEGGTFVTKIFRSKDYNSLLWVFNQLFAKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +G++
Sbjct: 182 KPPSSRNVSAEIFVVCRGYK 201
>gi|222445937|ref|ZP_03608452.1| hypothetical protein METSMIALI_01585 [Methanobrevibacter smithii
DSM 2375]
gi|222435502|gb|EEE42667.1| hypothetical protein METSMIALI_01585 [Methanobrevibacter smithii
DSM 2375]
Length = 217
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 1/198 (0%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
W +DPY ++A+ E +R+R++YK+ Q+++K ++++ +VDLG++PG WSQVA
Sbjct: 4 RWQMEKKHDPYYKKAKKEDYRSRASYKIKQLDKKFKLIKEGDTVVDLGAAPGGWSQVALE 63
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPT 147
G V I + DF + E + IGG +++SD +
Sbjct: 64 KVGEEGLVIGVDLNRIKPFPE-ENFHGIRGDFTTTEVQEKVMNLIGGKAKVIISDASPSL 122
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + ID LR++ L A +L G+ ++K FQG D+L LKK +++V K
Sbjct: 123 CGIKNIDQLRSIDLTNTVIGIADNILEPKGNLVMKVFQGPEYKDMLTRLKKKYRQVKTTK 182
Query: 208 PVASRAESVEMFLLAKGF 225
P +SR +S EM+++ F
Sbjct: 183 PPSSRKKSSEMYVVGLDF 200
>gi|146182230|ref|XP_001024178.2| FtsJ-like methyltransferase family protein [Tetrahymena
thermophila]
gi|146143910|gb|EAS03933.2| FtsJ-like methyltransferase family protein [Tetrahymena thermophila
SB210]
Length = 604
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 74/206 (35%), Positives = 119/206 (57%), Gaps = 1/206 (0%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S SS+ W+ H+ D YV++AQ + +R+R++YKL++I E+++I + +++++LGS+PG
Sbjct: 33 SKTKSSKMWMQEHVTDEYVKKAQKDNYRSRASYKLIEIQERYKIFKQGQKVLELGSAPGG 92
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPDLV 139
W+QVA T SN V+AID M+P+ G F++ D D + +I + D+V
Sbjct: 93 WTQVAVEFTKSNEKKPTVLAIDRDFMDPVQGAVFYQGDINDKKTQVYIPEFFKLEPVDIV 152
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G DHL L + L IGG ++KT G D+ + K +
Sbjct: 153 ISDMAPNFSGDLDQDHLLIQDLNNMTIDVCTKNLKIGGTVVMKTLNGTLEKDVFRMYKIY 212
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F++ + VKP ASRA S E++ L KG+
Sbjct: 213 FKEFLRVKPRASRARSSELYYLGKGY 238
>gi|19114041|ref|NP_593129.1| rRNA methyltransferase Spb1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|9910811|sp|O42832|SPB1_SCHPO RecName: Full=AdoMet-dependent rRNA methyltransferase spb1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|4106665|emb|CAA22605.1| rRNA methyltransferase Spb1 (predicted) [Schizosaccharomyces pombe]
Length = 802
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+R+R+A+KL+Q+N+K+ L+ + I+DL ++PG W QVA++
Sbjct: 14 DKWYKLAKEQGYRSRAAFKLVQLNQKYSFLEKAKVIIDLCAAPGGWLQVASKTCKPG--- 70
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKID 154
+ +V +D+ ++PI F D +R D+VL D A D
Sbjct: 71 SLIVGVDLAPIKPIPNCHTFVEDITSDKCRSQLRGYLKTWKADVVLHDGAPNVGSAWLQD 130
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N++L + K+ F KV KP +SR
Sbjct: 131 AYGQAQLVLMSMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFNKVEATKPPSSRNV 190
Query: 215 SVEMFLLAKGFR 226
S E+F++ +G++
Sbjct: 191 SAEIFVVCRGYK 202
>gi|169641976|gb|AAI60685.1| LOC431876 protein [Xenopus laevis]
Length = 852
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N K Q LQ R +VDL +
Sbjct: 1 MGKKGKVGKSR-------KDKFYHLAKETGYRSRSAFKLIQLNRKFQFLQRARALVDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGN 135
+PG W QVAA+ + + ++ ID++ ++PI V + D D + +++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIIGIDLVPIKPIPNVLTLQEDITTEDCRQAVKKHLQTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A + D + L A A + L+ GG F+ K F+ +L +
Sbjct: 111 ADVVLNDGAPNVGANWTHDAFSQVHLSLMALRLACDCLSRGGWFITKIFRSSDYQSLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L++ F+KV KP ASR+ES E+F++ +GF
Sbjct: 171 LQQFFKKVNSTKPQASRSESAEIFVVCQGF 200
>gi|156402433|ref|XP_001639595.1| predicted protein [Nematostella vectensis]
gi|156226724|gb|EDO47532.1| predicted protein [Nematostella vectensis]
Length = 306
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + A+ G+RARSA+KL+Q+N K LQ +R ++DL ++PG W QVA++
Sbjct: 9 KRRKDKFYHLAKETGYRARSAFKLIQLNRKFGFLQKSRCLIDLCAAPGGWLQVASKFMP- 67
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-IRQAIGGNPDLVLSDMAYPTIGH 150
++ +V +D++ ++PI V F D + ++ D VL+D A
Sbjct: 68 --MSSIIVGVDLVPIKPIKNVITFTEDITTERCKQLLKKELKTWKADCVLNDGAPNVGTA 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L +A A E L GG F+ K F+ +L + ++ F+ V KP A
Sbjct: 126 WVQDAFTQAELTLSALKLACENLKEGGWFITKVFRSKDYQPLLWVFQQLFKSVHSTKPQA 185
Query: 211 SRAESVEMFLLAKGF 225
SR ES E+F++ +G+
Sbjct: 186 SRNESAEIFVVCQGY 200
>gi|302843764|ref|XP_002953423.1| hypothetical protein VOLCADRAFT_63770 [Volvox carteri f.
nagariensis]
gi|300261182|gb|EFJ45396.1| hypothetical protein VOLCADRAFT_63770 [Volvox carteri f.
nagariensis]
Length = 440
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
++ D Y A+ +G+R+R+A+KL+Q+N K+ L R ++DL ++PG W QVAA+
Sbjct: 9 KNRLDKYYHLAKEQGYRSRAAFKLIQLNRKYNFLGKCRALLDLCAAPGGWLQVAAKTMPV 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGH 150
+ ++ +D+ ++PI GVK D R+A D+VL D A G
Sbjct: 69 G---SLILGVDLAPIKPIRGVKTLVQDITTQQCRSAIKREAGNAKMDVVLHDGAPNVGGA 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
+ +L + A++ L G F+ K F+ N +L + F+KV KP A
Sbjct: 126 WASEAYNQSTLVLDSLKLAVDTLAPKGTFVTKIFRSKDYNALLYAFNQLFEKVEATKPAA 185
Query: 211 SRAESVEMFLLAKGFR 226
SR S E+F++ GF+
Sbjct: 186 SRNASAEIFVVCIGFK 201
>gi|170042491|ref|XP_001848957.1| AdoMet-dependent rRNA methyltransferase spb1 [Culex
quinquefasciatus]
gi|167866033|gb|EDS29416.1| AdoMet-dependent rRNA methyltransferase spb1 [Culex
quinquefasciatus]
Length = 857
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 57/196 (29%), Positives = 104/196 (53%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + + A+ G+R+R+A+KL+Q+N K LQ ++ +DL ++PG W QVA +
Sbjct: 9 KDRKDKFYKLAKETGYRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMPV 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGH 150
+ + V+ +D+ ++ + G D + + ++ D+VL+D A +
Sbjct: 69 S---SIVIGVDLYAIKNVPGCISLVGDITSDKTKSDLTKELKTWKADVVLNDGAPNVGRN 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D + + L +AT A + L GG F+ K F+ N ++ +LK+ F+KV KP A
Sbjct: 126 WLFDAYQQVCLTLSATKLATQFLRPGGWFITKVFRSKDYNALIWVLKQLFKKVHATKPSA 185
Query: 211 SRAESVEMFLLAKGFR 226
SR ES E+F++ + +R
Sbjct: 186 SRNESAEIFVVCQHYR 201
>gi|260950745|ref|XP_002619669.1| hypothetical protein CLUG_00829 [Clavispora lusitaniae ATCC 42720]
gi|238847241|gb|EEQ36705.1| hypothetical protein CLUG_00829 [Clavispora lusitaniae ATCC 42720]
Length = 298
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/212 (31%), Positives = 110/212 (51%), Gaps = 6/212 (2%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-QSNRRIVDLGSSPG 79
SS+ W+ R ++D + ++++ EG+R+R+AYKL++I+ K ++ ++ R IVDLG +PG
Sbjct: 71 KSGTSSKRWVARQMDDAHTKKSKAEGYRSRAAYKLIEIDSKFRLFNKNTRNIVDLGFAPG 130
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL- 138
+W+QVA S R++ +D+++ P G F + D + I
Sbjct: 131 AWTQVALARCKSKNITPRILGVDLINCSPPEGSSFLQGDIFSKKTHSEIVNFFDPEGHSQ 190
Query: 139 ----VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
V+SDM T G + DH +M LC+ A +L G+ ++K + G +
Sbjct: 191 PLDLVMSDMMANTSGIKDNDHFASMDLCDGVLILACRLLKKNGNLVMKFYTGKEERLLQN 250
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+K F KV KP A RAES EM+ +A R
Sbjct: 251 KLEKVFHKVFMTKPAACRAESREMYFVALKKR 282
>gi|119901150|ref|XP_001250807.1| PREDICTED: FtsJ homolog 1 [Bos taurus]
gi|297478416|ref|XP_002690096.1| PREDICTED: FtsJ homolog 1-like [Bos taurus]
gi|296484247|gb|DAA26362.1| FtsJ homolog 1-like [Bos taurus]
Length = 327
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 4/198 (2%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
W ++ D Y + A+ +GWRARSA+KLLQ++E+ Q+ Q R +DL ++PGSWSQV ++
Sbjct: 3 WSSKDKRDVYYRLAKEKGWRARSAFKLLQLDEEFQLFQGVTRAIDLCAAPGSWSQVLSQK 62
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL-VLSDMAYPT 147
G + VVA+D+ M P+ GV + D L + + I Q P V+ D A
Sbjct: 63 IG-GQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAKEIIQHFEDCPTDLVVCDGAPDV 121
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + L + L GG F+ K F+G I L+ F +V+ K
Sbjct: 122 TGLHVEYMQAQLLLAALNLAMHV--LKPGGCFVGKIFRGRDVTLIYSQLRVFFSRVLCAK 179
Query: 208 PVASRAESVEMFLLAKGF 225
P +SR S+E F + KG+
Sbjct: 180 PRSSRNSSIEAFAVCKGY 197
>gi|46126149|ref|XP_387628.1| hypothetical protein FG07452.1 [Gibberella zeae PH-1]
Length = 839
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ +R ++DL ++PGSW QVAA +
Sbjct: 13 DKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSRVLIDLCAAPGSWLQVAAEVMPQG--- 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ +V D+ ++PI V F+ D D R + V+ D A D
Sbjct: 70 SLIVGCDLSPIKPIPRVTSFQSDITSEDCRATLKRLLLSHKACTVIHDGAPNVGTAWTQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
+L + A E + G F+ K F+ N +L + K+ F KV KP +SR
Sbjct: 130 AFDQNALVLQSLKLATEFMKPDGTFVTKVFRSKDYNSLLWVFKQLFNKVEATKPSSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ +G++
Sbjct: 190 SSEIFVVCRGYK 201
>gi|302908896|ref|XP_003049953.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256730890|gb|EEU44240.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 833
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYP 146
+ N + +V +D+ ++PI V F+ D + D VL D A
Sbjct: 65 VMPPN---SLIVGVDLAPIKPIPRVITFQSDITTEKCRATIRQHFKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L A A E L GG F+ K F+ N +L +L + F KV
Sbjct: 122 VGTAWAQDSFNQAELALQAMKLATEFLIEGGTFVTKVFRSKDYNPLLWVLNQLFTKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +G++
Sbjct: 182 KPPSSRNVSAEIFVVCRGYK 201
>gi|291228520|ref|XP_002734226.1| PREDICTED: Putative rRNA methyltransferase 3-like [Saccoglossus
kowalevskii]
Length = 261
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + + A+ G+RARSA+KLLQ+N K Q LQ +R ++DL ++PG W QVA+ +
Sbjct: 11 RKDKFYKLAKETGYRARSAFKLLQLNRKFQFLQKSRVLIDLCAAPGGWLQVASNHMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGHRK 152
+ +V +D++ + PI + D +R + D+VL+D A +
Sbjct: 70 --SLIVGVDLVPIRPIPNTITVQADITTEKCRSLLRNELKDWKADIVLNDGAPNVGKNWL 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D SL A A + L GG F+ K F+ ++ + K+ F+KV KP ASR
Sbjct: 128 HDAFTQASLTLKALKLASDFLTQGGWFVTKVFRSKDYQPLMWVFKQLFKKVHATKPPASR 187
Query: 213 AESVEMFLLAKGF 225
+ES E+F++ +G+
Sbjct: 188 SESAEIFVVCQGY 200
>gi|294925458|ref|XP_002778927.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
gi|239887773|gb|EER10722.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
Length = 418
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + Q A+ +G+RARSA+KL+Q+ +K+ L++ R VDL +PG WSQVA + +
Sbjct: 9 KERLDRFYQLAKEQGYRARSAFKLIQLEKKYGFLKNARSCVDLCGAPGGWSQVAVKHMPA 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI-RQAIGGNPDLVLSDMAYPTIGH 150
N ++V+ +D++ ++PI GV + D +F+ ++ G D+VL+D A
Sbjct: 69 N---SKVICVDLMPIKPIKGVVTMQCDITTQKCRQFLLKELNGTPCDVVLNDGAPNVGAS 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D LC A A +ML GG F+ K F+ N +L + ++ F+KV KP A
Sbjct: 126 WAKDAYNQAELCLYAVHLAADMLRKGGTFVTKVFRSSDYNSLLWVFQQLFEKVEATKPTA 185
Query: 211 SRAESVEMFLLAKGFR 226
SR S E+F+ KGF+
Sbjct: 186 SRNVSAEIFVTCKGFK 201
>gi|260809478|ref|XP_002599532.1| hypothetical protein BRAFLDRAFT_279878 [Branchiostoma floridae]
gi|229284812|gb|EEN55544.1| hypothetical protein BRAFLDRAFT_279878 [Branchiostoma floridae]
Length = 321
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 4/194 (2%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
H D + + A+ G+RARSA+KL+Q+N K+ LQ ++ +VDL ++PG W QVAA+ +
Sbjct: 10 HRKDKFYKLAKETGYRARSAFKLIQLNRKYGFLQRSKVLVDLCAAPGGWLQVAAKYMPVS 69
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHR 151
+ +V ID++ ++PI V + D + ++ D VL D A +
Sbjct: 70 ---SLLVGIDLVPIKPIPNVSTIQADITTDKCRQALRKELATWQADCVLHDGAPNVGSNW 126
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D L AA A E+L+ GG F+ K F+ + +L + ++ F+ V KP AS
Sbjct: 127 LKDASEQAQLVLAALRLATEVLSKGGCFVTKVFRSKDYHALLWVFQQLFKLVHATKPQAS 186
Query: 212 RAESVEMFLLAKGF 225
R ES E+F++ +GF
Sbjct: 187 RHESAEIFVVCEGF 200
>gi|317484651|ref|ZP_07943554.1| FtsJ-like methyltransferase [Bilophila wadsworthia 3_1_6]
gi|316924125|gb|EFV45308.1| FtsJ-like methyltransferase [Bilophila wadsworthia 3_1_6]
Length = 204
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +A+ E + ARS YKL +I+ + +I + +++DLG++PGSWS AA G+
Sbjct: 2 KEYRDHYFLKAKQENYPARSVYKLKEIDGRFKIFRKGMKVLDLGAAPGSWSLGAAERVGA 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
I V+F + D + A G +V+SDMA T G +
Sbjct: 62 QGK-VLACDIQSTVTVFPPNVEFHQEDVFQRSEAFERQLAETGPFHVVMSDMAPQTTGTK 120
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D R++ LC A A + L GG F+VK F G ++L ++ F +V KP +S
Sbjct: 121 FTDQARSLELCLEALAVAEKYLVKGGSFVVKIFMGPDVGELLKGMRPRFARVTSFKPQSS 180
Query: 212 RAESVEMFLLAKGFR 226
R ES E F + GF+
Sbjct: 181 RVESKETFFVGLGFK 195
>gi|256831249|ref|YP_003159977.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfomicrobium
baculatum DSM 4028]
gi|256580425|gb|ACU91561.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfomicrobium
baculatum DSM 4028]
Length = 204
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 1/194 (0%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y ++A+ + + ARS YKL ++++ H++L+ ++++DLG+ PGSW+ AA G+
Sbjct: 2 KQYRDYYFKKAKQDNYPARSVYKLQEMDKAHKLLRQGQKVLDLGACPGSWTLYAAERVGA 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ +++ D V F + D D+V+SDMA T G +
Sbjct: 62 EGRVLGID-LNMPDTRFPEQVTFLQEDIFARTPLFLGHLQALAPFDVVMSDMAPKTTGSK 120
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D R++ L EAA A E L GG F+ K F+G + LK F KV KP +S
Sbjct: 121 FTDQARSIQLVEAAFGVAEEWLASGGTFIAKVFEGPDVQPFVQSLKVRFAKVGMFKPKSS 180
Query: 212 RAESVEMFLLAKGF 225
RAES E+F+L GF
Sbjct: 181 RAESKEIFILGLGF 194
>gi|158290286|ref|XP_311882.4| AGAP003002-PA [Anopheles gambiae str. PEST]
gi|157017821|gb|EAA07890.4| AGAP003002-PA [Anopheles gambiae str. PEST]
Length = 868
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 54/196 (27%), Positives = 103/196 (52%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + + A+ G+R+R+A+KL+Q+N + LQ ++ +DL ++PG W QVA +
Sbjct: 9 KDRRDKFYKLAKESGYRSRAAFKLIQLNRRFGFLQQSQVCLDLCAAPGGWMQVAKQNMPV 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGH 150
+ + V+ +D+ ++ + G D + + ++ D+VL+D A +
Sbjct: 69 S---SIVIGVDLYPIKNVPGCISLIGDITSDKTKADLAKELKTWKVDVVLNDGAPNVGKN 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D + + L +A A + L GG F+ K F+ N ++ +LK+ F+KV KP A
Sbjct: 126 WLHDAYQQVCLTLSAVKLATQFLRPGGWFITKVFRSKDYNALIWVLKQLFRKVHATKPSA 185
Query: 211 SRAESVEMFLLAKGFR 226
SR ES E+F++ + ++
Sbjct: 186 SRKESAEIFVVCQYYK 201
>gi|321474059|gb|EFX85025.1| hypothetical protein DAPPUDRAFT_300798 [Daphnia pulex]
Length = 861
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 4/194 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + A+ G+R+R+A+KLLQ+N K + L+ +R ++DL ++PGSW QVA + +
Sbjct: 8 RQDKFYHLAKETGYRSRAAFKLLQLNRKFEFLEKSRVVIDLCAAPGSWMQVAKQHMPVS- 66
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ ++ ID+ M+PI G + D ++ ++ D+VL D A +
Sbjct: 67 --SLIIGIDLFPMKPIQGCLTLQEDITTEKCYQSLKKELTTWKADVVLHDGAPNVGQNWI 124
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D L +A A E L GG F+ K F+ N ++ +L++ F++V KP ASR
Sbjct: 125 YDAFIQNQLVLSALKLATEFLVKGGWFVTKIFRSKDYNSLMWVLRQLFKRVHSTKPHASR 184
Query: 213 AESVEMFLLAKGFR 226
ES E+F++ +G+R
Sbjct: 185 MESAEIFVICQGYR 198
>gi|320170532|gb|EFW47431.1| FtsJ cell division protein [Capsaspora owczarzaki ATCC 30864]
Length = 1045
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + + A+ G+R+R+A+KL+Q+N K+ L ++R ++DL ++PG W QVA++ +
Sbjct: 11 RRDKFYKLAKEAGYRSRAAFKLIQLNRKYNFLGTSRVLLDLCAAPGGWLQVASKHMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLVLSDMAYPTIGHRK 152
+ ++ +D + ++PI V D IR+ G D VL D A
Sbjct: 70 --SVIIGVDRVQIKPIHNVICLTEDITTDKCRAAIRKETKGWKVDCVLHDGAPNVGTSWT 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D +L + A E L GG ++ K F+ N ++ + ++ F+KV KP ASR
Sbjct: 128 QDAYTQAALVLMSLKIACEHLGQGGWYITKVFRSADYNALVWVFQQFFKKVHATKPQASR 187
Query: 213 AESVEMFLLAKGFRK 227
ES E+F++ +G+ K
Sbjct: 188 NESAEIFVVCQGYNK 202
>gi|15126717|gb|AAH12281.1| Ftsj3 protein [Mus musculus]
Length = 838
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F +V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFHRVQATKPQASRHESAEIFVVCQGF 200
>gi|294891100|ref|XP_002773420.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
gi|239878573|gb|EER05236.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
Length = 419
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + Q A+ +G+R RSA+KL+Q+ +K+ L++ R VDL +PG WSQVAA+ +
Sbjct: 9 KERLDRFYQLAKEQGYRGRSAFKLIQLEKKYGFLKNARSCVDLCGAPGGWSQVAAKHMPA 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI-RQAIGGNPDLVLSDMAYPTIGH 150
N ++V+ +D++ ++PI GV + D +F+ ++ G D+VL+D A
Sbjct: 69 N---SKVICVDLMPIKPIKGVVTMQCDITTQKCRQFLLKELNGTPCDVVLNDGAPNVGAS 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D LC A A +ML GG F+ K F+ N +L + ++ F+KV KP A
Sbjct: 126 WAKDAYNQAELCLYAVHLAADMLRKGGTFVTKVFRSSDYNSLLWVFQQLFEKVEATKPTA 185
Query: 211 SRAESVEMFLLAKGFR 226
SR S E+F+ KGF+
Sbjct: 186 SRNVSAEIFVTCKGFK 201
>gi|261349524|ref|ZP_05974941.1| ribosomal RNA large subunit methyltransferase J [Methanobrevibacter
smithii DSM 2374]
gi|288861888|gb|EFC94186.1| ribosomal RNA large subunit methyltransferase J [Methanobrevibacter
smithii DSM 2374]
Length = 207
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 1/199 (0%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
W +DPY ++A+ E +R+R++YK+ Q+++K ++++ +VDLG++PG WSQVA
Sbjct: 4 RWQMEKKHDPYYKKAKKEDYRSRASYKIKQLDKKFKLIKEGDTVVDLGAAPGGWSQVALE 63
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPT 147
G V I + DF + E + IGG +V+SD +
Sbjct: 64 KVGEEGLVIGVDLNRIKPFPE-ENFHGIRGDFTTTEVQEKVMNLIGGKAKVVISDASPSL 122
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + ID LR++ L A +L G+ ++K FQG D+L LKK +++V K
Sbjct: 123 CGIKNIDQLRSIDLTNTVIGIADNILEPKGNLVMKVFQGPEYKDMLTRLKKKYRQVKTTK 182
Query: 208 PVASRAESVEMFLLAKGFR 226
P +SR +S EM+++ F+
Sbjct: 183 PPSSRKKSSEMYVVGLDFK 201
>gi|312372717|gb|EFR20615.1| hypothetical protein AND_19798 [Anopheles darlingi]
Length = 890
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + + A+ G+R+R+A+KL+Q+N + LQ ++ +DL ++PG W QVA +
Sbjct: 9 KDRKDKFYKLAKESGYRSRAAFKLIQLNRRFAFLQQSQVCIDLCAAPGGWMQVAKQNMPV 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGH 150
+ + V+ +D+ ++ + G D + + ++ D+VL+D A +
Sbjct: 69 S---SIVIGVDLYPIKNVPGCISLVGDITSDKTKSDLAKELKTWKADVVLNDGAPNVGKN 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D + + L +A A + L GG F+ K F+ N ++ +LK+ F+KV KP A
Sbjct: 126 WLHDAYQQVCLTLSAVKLATQFLRPGGWFITKVFRSKDYNALIWVLKQLFKKVHATKPSA 185
Query: 211 SRAESVEMFLLAKGFR 226
SR ES E+F++ + +R
Sbjct: 186 SRKESAEIFVVCQHYR 201
>gi|198424725|ref|XP_002124852.1| PREDICTED: similar to cell division protein ftsj [Ciona
intestinalis]
Length = 273
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 84/229 (36%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 12 GLTQKVKNRSCQGSSRDWLN-----------RHINDPYVQRAQLEGWRARSAYKLLQINE 60
G ++K R + S++++ R ++DP+V+ LEG+R RSAYKL+ I E
Sbjct: 38 GQAVEIKKRKIRVGSKNFMEIPIKGTIEYVSRQLSDPFVKMRHLEGYRCRSAYKLMDIVE 97
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFL 120
KH +L+ ++VDLG++PGSWSQVAA + ++ V+A+D+L P+ GV DF
Sbjct: 98 KHDLLKPGMKVVDLGAAPGSWSQVAAERVINKDDDGLVIAVDLLKFPPLDGVTQITGDFT 157
Query: 121 DLDSWEFIRQA----IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
++ + I+ D+VL D A G + DHL + + AAT F L+ML
Sbjct: 158 KKETQDEIKALLGTEENRFVDIVLCDAAPSASGFKNKDHLAIVQIIAAATNFTLKMLANH 217
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G+FL K G T I L HF V +KP ASR+ES E F+L K +
Sbjct: 218 GNFLFKILDGTETMKIKKFLSLHFMSVASLKPKASRSESAEHFILCKNY 266
>gi|261326555|emb|CBH09516.1| FtsJ cell division protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 905
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSA+KL+Q+N K+ L R +V
Sbjct: 1 MGTKSKKKAKT----------RLDAYYRLAKDQGFRARSAFKLVQLNRKYDFLSKCRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA- 131
DL ++PGSW QVAA+ +++V +D++ + PI GVK F D + + + I
Sbjct: 51 DLCAAPGSWCQVAAKHMPVG---SKIVGVDLVPIAPIRGVKTFVGDITEEKTKKIIMTYL 107
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D V+ D A G D SL A A ++L GG F+ K F+ +
Sbjct: 108 KREPVDCVIHDGAPNVGGVWSRDLFEQNSLVLHAAKLASKLLRPGGWFVTKVFRSQDFHK 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ ++K+ F KV KP+ASR ES E+F+ G++
Sbjct: 168 LMWVMKQLFDKVEATKPLASRMESAEIFVTCAGYK 202
>gi|303325468|ref|ZP_07355911.1| ribosomal RNA large subunit methyltransferase J [Desulfovibrio sp.
3_1_syn3]
gi|302863384|gb|EFL86315.1| ribosomal RNA large subunit methyltransferase J [Desulfovibrio sp.
3_1_syn3]
Length = 210
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +A+ E + ARS YKL +++ K ++L+ +++DLG++PGSWS A GS
Sbjct: 2 KEYRDHYFLKAKRENYPARSVYKLKELDAKFRLLKPGMKVLDLGAAPGSWSLGVAEKVGS 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
I + V F + D + + A G DLV+SDMA T G R
Sbjct: 62 KG-LVLACDIQSTETAFPPQVLFMQEDVFQRSAAFEAKLAELGPFDLVISDMAPRTTGTR 120
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D R++ L A A L GG+F+VK F G D+L ++K F V KP +S
Sbjct: 121 FTDQARSLELTLEALAVACLHLKQGGNFVVKIFMGPDIQDLLTPMRKAFSSVKSFKPKSS 180
Query: 212 RAESVEMFLLAKGFR 226
RAES E F GFR
Sbjct: 181 RAESKETFFTGLGFR 195
>gi|124512936|ref|XP_001349824.1| ribosomal RNA methyltransferase, putative [Plasmodium falciparum
3D7]
gi|23615241|emb|CAD52231.1| ribosomal RNA methyltransferase, putative [Plasmodium falciparum
3D7]
Length = 288
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 78/237 (32%), Positives = 123/237 (51%), Gaps = 21/237 (8%)
Query: 7 SSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
+ KV N+ +S W+ R I+D YV RA+ + +R+R+AYKL++++ K+ L+
Sbjct: 32 KRGYKEAAPKVFNKKSSHTS-RWIQRQISDRYVLRAKNDNYRSRAAYKLIELDNKYLFLK 90
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-- 124
N+ I+D+G PGSW QV T + N +++ ID M+PI V F + + +
Sbjct: 91 KNKIILDIGCYPGSWCQVILERTKNYKN--KIIGIDKKIMDPIPNVYFIQGEIGKDNMNN 148
Query: 125 ----------------WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFF 168
++ D++LSD A P IG++ DHL + L + T F
Sbjct: 149 IKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHF 208
Query: 169 ALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ +NIGG ++VK + G TN++ LK FQ V KP ASR ES E++L+ K F
Sbjct: 209 MEQYINIGGTYIVKMYLGSQTNNLKTYLKGMFQLVHTTKPKASRNESREIYLVCKNF 265
>gi|78357369|ref|YP_388818.1| ribosomal RNA large subunit methyltransferase J [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|123552112|sp|Q30YX3|RLME_DESDG RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|78219774|gb|ABB39123.1| 23S rRNA Um-2552 2'-O-methyltransferase [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 207
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +A+ E + ARS YKL +I+++ IL+ R++DLG++PGSWS AA G
Sbjct: 2 KKYRDHYFLKAKRENYPARSVYKLKEIDKRFGILKQGMRVLDLGAAPGSWSLGAAEKIGP 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ I + V F + D + + + G D+V+SDMA T GH+
Sbjct: 62 SG-RVLAADIQTTETVFPPNVTFMQEDVFERSAEFEQALSETGPFDVVISDMAPKTTGHK 120
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D R+ +LC A A L GG F+VK F G + ++ F V KP +S
Sbjct: 121 FTDQARSSNLCFEALAVASLHLVEGGSFVVKIFMGPDVEAYVKQMRTLFTAVKSFKPKSS 180
Query: 212 RAESVEMFLLAKGFR 226
R+ES E F + GF+
Sbjct: 181 RSESKETFYIGLGFK 195
>gi|148292181|dbj|BAF62896.1| putative ftsj [uncultured bacterium]
Length = 210
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 4/205 (1%)
Query: 23 QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWS 82
++R WL H DP+V+RA+ E +R+R+A+KL +I+ + ++ + +++LG++PG W+
Sbjct: 2 TAAARRWLRAHAADPFVRRARRENYRSRAAFKLAEIDRRERLCRRGMTVLELGAAPGGWT 61
Query: 83 QVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLS 141
Q VVA+D + + GV+ D D + + I A G L+LS
Sbjct: 62 QYVRERVLPG---GVVVAVDRAPLADLPGVQVVNGDAGDEMTRKKIITACGAGRAHLLLS 118
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
DMA G D R +L + A A + L G LVK FQG + + + F
Sbjct: 119 DMAPDLTGVAATDQARGAALVDIALAVARDCLRADGVMLVKFFQGAESAAVRRRCGEMFG 178
Query: 202 KVIHVKPVASRAESVEMFLLAKGFR 226
+V VKP ASR S E +LL + +
Sbjct: 179 RVKSVKPAASRGRSREQYLLCRALK 203
>gi|329910110|ref|ZP_08275236.1| Ribosomal RNA large subunit methyltransferase J [Oxalobacteraceae
bacterium IMCC9480]
gi|327546263|gb|EGF31294.1| Ribosomal RNA large subunit methyltransferase J [Oxalobacteraceae
bacterium IMCC9480]
Length = 223
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 111/209 (53%), Gaps = 4/209 (1%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+++WL+ HINDPYV+ AQ EG+RAR+ YKL +I+E +++++ + IVDLGS+PGSW
Sbjct: 3 KNKLNKNWLHDHINDPYVKLAQKEGYRARAVYKLKEIDEGDKLIKAGQIIVDLGSTPGSW 62
Query: 82 SQVAARITGSNANNTRVVAI---DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-D 137
SQ A I D+L M+PI V F DF D + + G D
Sbjct: 63 SQYVRNKLSGKAGGGIDGIIIGLDMLPMDPIADVHFILGDFRDHKVLRQLEVILAGRKVD 122
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
+VLSDMA G D R + + A F+ L G LVK F G + I+ +
Sbjct: 123 VVLSDMAPNLSGIASADAARMEHIIDLAIEFSQAHLKPSGALLVKCFNGSGYSQIVEKFR 182
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP AS+ +S E+FLL KG +
Sbjct: 183 SEFKTVSPKKPKASKDKSSEIFLLGKGVK 211
>gi|194742497|ref|XP_001953739.1| GF17080 [Drosophila ananassae]
gi|190626776|gb|EDV42300.1| GF17080 [Drosophila ananassae]
Length = 301
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI-- 88
++ D Y ++A+ EGWRARSA+KLL ++E + IL +R VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRQAKEEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLY 64
Query: 89 ----TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL----VL 140
T +++A+D+ M PI GV + D + E I G N + V+
Sbjct: 65 DTCQTDDEKAAVKIIAVDLQAMAPIRGVIQLQGDITKQSTAEAIIGHFGDNKEDKAQLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G ++D L AA A +L GG F+ K F+G T + +K F
Sbjct: 125 CDGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATWLLSSQMKIFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+K KP +SR S+E F++ F
Sbjct: 185 KKFDIYKPPSSRPSSIEAFVVCSDF 209
>gi|310792520|gb|EFQ28047.1| Spb1 domain-containing protein [Glomerella graminicola M1.001]
Length = 852
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ +VDL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVVDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
A +V +D+ ++PI V F+ D IR D VL D A
Sbjct: 65 TCPVGA---LIVGVDLAPIKPIPKVITFQSDITTDKCRATIRSHLKTWKADCVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + + F KV
Sbjct: 122 VGTAWNQDSFNQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFNQLFTKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ KG++
Sbjct: 182 KPPSSRNVSAEIFVVCKGYK 201
>gi|332243108|ref|XP_003270724.1| PREDICTED: putative rRNA methyltransferase 3-like [Nomascus
leucogenys]
Length = 840
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|242009665|ref|XP_002425603.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
gi|212509496|gb|EEB12865.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
Length = 334
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV---AAR 87
++ D Y + A+ EGWRARSA+KLLQINE+ I ++ R+VDL S S ++
Sbjct: 5 SKDKRDIYYRLAKEEGWRARSAFKLLQINEEFNIFENVTRVVDLWSQVLSRKLYGKDMSK 64
Query: 88 ITGSNAN---NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDM 143
SN +T +VA+D+ M P+ GV + D L + + I + G+P LV+ D
Sbjct: 65 SVDSNQKLSNDTIIVAVDLQPMAPLPGVIQIQGDITKLSTAKQIIEHFSGSPAQLVVCDG 124
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
A G ID L AA +L GG F+ K F+G I LK F+ V
Sbjct: 125 APDVTGLHDIDEFVQSQLLLAAFNITSHILMKGGTFVAKIFRGKDITLIYSQLKIFFKFV 184
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 185 TVAKPRSSRNSSIEAFVVCQNYQ 207
>gi|195349217|ref|XP_002041143.1| GM15199 [Drosophila sechellia]
gi|194122748|gb|EDW44791.1| GM15199 [Drosophila sechellia]
Length = 302
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI-- 88
++ D Y + A+ EGWRARSA+KL+ ++E + IL +R VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRLAKDEGWRARSAFKLIHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLY 64
Query: 89 ----TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DLVLSD 142
T +++A+D+ M PI G+ + D + E I GGN LV+ D
Sbjct: 65 DTCETDDEKAAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCD 124
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A G ++D L AA A +L GG F+ K F+G T+ + ++ F+K
Sbjct: 125 GAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKK 184
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
KP +SR S+E F++ GF
Sbjct: 185 FDIYKPPSSRPSSIEAFVVCSGF 207
>gi|194900526|ref|XP_001979808.1| GG21940 [Drosophila erecta]
gi|190651511|gb|EDV48766.1| GG21940 [Drosophila erecta]
Length = 300
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI-- 88
++ D Y ++A+ EGWRARSA+KLL ++E + IL +R VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLY 64
Query: 89 ----TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DLVLSD 142
T +++A+D+ M PI G+ + D + E I GGN LV+ D
Sbjct: 65 DACETDDEKAAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIISHFGGNEKAQLVVCD 124
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A G ++D L AA A +L GG F+ K F+G T+ + ++ F+K
Sbjct: 125 GAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKK 184
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
KP +SR S+E F++ GF
Sbjct: 185 FDIYKPPSSRPSSIEAFVVCSGF 207
>gi|239613095|gb|EEQ90082.1| AdoMet-dependent rRNA methyltransferase spb1 [Ajellomyces
dermatitidis ER-3]
Length = 804
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVIDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
S + ++ +D+ ++PI V F+ D IRQ D VL D A
Sbjct: 65 CMPS---QSLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGVAWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFNNVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCQGFK 201
>gi|84043710|ref|XP_951645.1| cell division protein [Trypanosoma brucei TREU927]
gi|33348588|gb|AAQ15913.1| FtsJ cell division protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|62359748|gb|AAX80179.1| FtsJ cell division protein, putative [Trypanosoma brucei]
Length = 905
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 14/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ K K ++ D Y + A+ +G+RARSA+KL+Q+N K+ L R +V
Sbjct: 1 MGTKSKKKAKT----------RLDAYYRLAKDQGFRARSAFKLVQLNRKYDFLSKCRVLV 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA- 131
DL ++PGSW QVAA+ +++V +D++ + PI GVK F D + + + I
Sbjct: 51 DLCAAPGSWCQVAAKHMPVG---SKIVGVDLVPIAPIRGVKTFVGDITEEKTKKIIMTYL 107
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D V+ D A G D SL A A ++L GG F+ K F+ +
Sbjct: 108 KREPVDCVIHDGAPNVGGVWSRDLFEQNSLVLHAAKLASKLLRPGGWFVTKVFRSQDFHK 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ ++K+ F KV KP+ASR ES E+F+ G++
Sbjct: 168 LMWVMKQLFDKVEATKPLASRMESAEIFVTCAGYK 202
>gi|296109210|ref|YP_003616159.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanocaldococcus
infernus ME]
gi|295434024|gb|ADG13195.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanocaldococcus
infernus ME]
Length = 245
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 5/204 (2%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
++W+ + DPY + A+ +R+R+ +KLLQINEK L+ + ++DLG +PG W + A
Sbjct: 6 KNWIMKRKRDPYYRLAKKLKYRSRAYFKLLQINEKFHFLKPKQAVLDLGCAPGGWMEAAK 65
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA----IGGNPDLVLSD 142
I G + + + + + DF + + I++ D+V+SD
Sbjct: 66 EIVGDQGLIVGIDLQKVKPFKD-KNLIPIQGDFTKERNLKKIKEILRERGREKFDVVISD 124
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
+ GH +DH R++ L + A A EML G F+ K F G +++ L KK+F K
Sbjct: 125 ASPNISGHWAVDHARSVELVKTALQIATEMLRKDGHFVAKVFYGDMVDELKNLAKKYFDK 184
Query: 203 VIHVKPVASRAESVEMFLLAKGFR 226
V KP ASR ES E++L+AK F+
Sbjct: 185 VYLTKPRASRKESSEIYLIAKRFK 208
>gi|325189292|emb|CCA23812.1| rRNA methyltransferase putative [Albugo laibachii Nc14]
Length = 874
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 4/196 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
+H D Y A+ +G+RARSA+KL+Q+N+K+ L + + +DL ++PG W QVAA+
Sbjct: 5 KKHDKDKYYLLARQQGYRARSAFKLIQLNKKYDFLSTAKVCIDLCAAPGGWCQVAAKYMP 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIG 149
++ + ++ ID+L + PI GVK F+ D + IR + D+VL D A
Sbjct: 65 TS---SIIIGIDLLPIRPIRGVKTFQCDITTAKCRQIIRQEMQNWQADVVLCDGAPNVGA 121
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
D L A A +++ G F+ K F+ N +L + ++ F+KV KP+
Sbjct: 122 EYSKDAYVQNELSLVALKLAADVMGRGATFVSKVFRSQDYNALLWVFRQLFKKVSATKPL 181
Query: 210 ASRAESVEMFLLAKGF 225
+SR ES E+F++ + F
Sbjct: 182 SSRNESAEIFVVCEHF 197
>gi|326515274|dbj|BAK03550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 486
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 7/199 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y A+ +G+R+R+A+KL Q++++ + L + R ++DL ++PG W QVA +
Sbjct: 8 KQRRDEYYHLAKEQGYRSRAAFKLQQLDDRFRFLPAARAVLDLCAAPGGWVQVAVARAPA 67
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN----PDLVLSDMAYPT 147
A VV +D++ + P+ G D +R+ + D+VL D +
Sbjct: 68 GA---FVVGVDLVPIRPVRGAHSLTEDITTTRCRSAVRRLMDSRGVAVFDVVLHDGSPNV 124
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + +L A A L G F+ K F+ + I+ LK+ F KV K
Sbjct: 125 GGAWAQEATAQSALVIDAVRLATAFLAPKGAFITKVFRSQDYSAIMFCLKQLFDKVEVTK 184
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASR S E++++ ++
Sbjct: 185 PRASRGTSAEIYIICLKYK 203
>gi|15679761|ref|NP_276879.1| cell division protein J [Methanothermobacter thermautotrophicus
str. Delta H]
gi|9911011|sp|O27801|RLME_METTH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|2622903|gb|AAB86239.1| cell division protein J [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 211
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
+ W D Y + A+ E +R+R++YKLLQ+N K+++++ R++DLG++PG WSQVA
Sbjct: 3 KRWQAERKRDHYYRSAKKENYRSRASYKLLQLNNKYKLIKKGDRVLDLGAAPGGWSQVAL 62
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
G V I + + DF D + + I + +GG D+V+SD A
Sbjct: 63 DKVGEEGLVVAVDLQRIKGFPA-ENFRAIRGDFTDPEVKDKIIRELGGRADVVISDAAPS 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G R IDHLR++ L E A +L+ G+ L+K FQG + ++ L+K F K+
Sbjct: 122 LSGIRDIDHLRSVDLVENVLDIAYRVLDRKGNILIKAFQGPELDRVIKELRKDFWKLKTT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S EM+++ + F+
Sbjct: 182 KPASSRKASAEMYIVGRDFK 201
>gi|195059568|ref|XP_001995663.1| GH17878 [Drosophila grimshawi]
gi|193896449|gb|EDV95315.1| GH17878 [Drosophila grimshawi]
Length = 836
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + Q A+ G+R+R+A+KL+Q+N K+ LQ ++ VDL ++PG W QVA + +
Sbjct: 11 RKDKFYQLAKETGFRSRAAFKLIQLNRKYGFLQESQVCVDLCAAPGGWMQVAKQNMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D+ + I G D + + D+VL D A +
Sbjct: 70 --SIVIGVDLFPIRAIPGCISLVEDITTEKCRQSLTMELQSWKVDVVLHDGAPNVGRNWL 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + + L A A + + GG F+ K F+ N +L +LK+ F+KV KP ASR
Sbjct: 128 YDAYQQICLTLNALKLATQFMRKGGWFVTKVFRSKDYNSLLWVLKQLFKKVHATKPSASR 187
Query: 213 AESVEMFLLAKGF 225
ES E+F++ + +
Sbjct: 188 KESAEIFVVCQYY 200
>gi|195432683|ref|XP_002064346.1| GK19748 [Drosophila willistoni]
gi|194160431|gb|EDW75332.1| GK19748 [Drosophila willistoni]
Length = 824
Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + Q A+ G+R+R+A+KL+Q+N K LQ ++ +DL ++PG W QVA + +
Sbjct: 11 RKDKFYQLAKETGFRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D+ + PI G D + ++ D+VL D A +
Sbjct: 70 --SIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWL 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + + L A + L GG F+ K F+ N +L +LK+ F+KV KP ASR
Sbjct: 128 FDAYQQICLTLNALKLGTQFLRSGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASR 187
Query: 213 AESVEMFLLAKGF 225
ES E+F++ +G+
Sbjct: 188 KESAEIFVVCQGY 200
>gi|195133724|ref|XP_002011289.1| GI16447 [Drosophila mojavensis]
gi|193907264|gb|EDW06131.1| GI16447 [Drosophila mojavensis]
Length = 826
Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + Q A+ G+R+R+A+KL+Q+N K LQ ++ +DL ++PG W QVA + +
Sbjct: 11 RKDKFYQLAKETGFRSRAAFKLIQLNRKFGFLQQSQVCIDLCAAPGGWMQVAKQNMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D+ + PI G D + ++ D+VL D A +
Sbjct: 70 --SIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWL 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + + L A + L GG F+ K F+ N +L +LK+ F+KV KP ASR
Sbjct: 128 YDAYQQICLTLNALKLGTQFLRGGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASR 187
Query: 213 AESVEMFLLAKGF 225
ES E+F++ +G+
Sbjct: 188 KESAEIFVVCQGY 200
>gi|109116848|ref|XP_001116413.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 2 [Macaca
mulatta]
Length = 843
Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|66357152|ref|XP_625754.1| Spb1p-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
gi|46226949|gb|EAK87915.1| Spb1p-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
Length = 1011
Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y A+ +G+RARSA+KL+Q+ +K I ++ + +VDL ++PG W QVA R G
Sbjct: 9 KDRLDRYYHLAKEQGYRARSAFKLIQLAQKFNIFKNCQVLVDLCAAPGGWLQVAKRNMGV 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGH 150
+ ++++ +D++ ++ I GV FK D + I + G P D+VL D A
Sbjct: 69 S---SKIIGVDLVAIKGIPGVTTFKCDITTERCRKLIFDELNGIPVDVVLHDGAPNVGTS 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L + A E+L G F+ K F+ N +L +L + F V KP +
Sbjct: 126 WDKDAYIQNELVLHSAELACEILRPNGIFVTKVFRSTDYNSVLWVLSQLFNTVKATKPQS 185
Query: 211 SRAESVEMFLLAKGFR 226
SR S E+FL+ G++
Sbjct: 186 SRNVSAEIFLVCLGYK 201
>gi|195570241|ref|XP_002103117.1| GD19132 [Drosophila simulans]
gi|194199044|gb|EDX12620.1| GD19132 [Drosophila simulans]
Length = 302
Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI-- 88
++ D Y + A+ EGWRARSA+KLL ++E + IL +R VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRLAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLY 64
Query: 89 ----TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DLVLSD 142
T +++A+D+ M PI G+ + D + E I GGN LV+ D
Sbjct: 65 DTCETDDEKAAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCD 124
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A G ++D L AA A +L GG F+ K F+G T+ + ++ F+K
Sbjct: 125 GAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKK 184
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
KP +SR S+E F++ GF
Sbjct: 185 FDIYKPPSSRPSSIEAFVVCSGF 207
>gi|296476235|gb|DAA18350.1| putative rRNA methyltransferase 3 [Bos taurus]
Length = 809
Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ +S G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKSKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWAHDAYSQAHLTLMALRLACDFLGRGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|298674755|ref|YP_003726505.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanohalobium
evestigatum Z-7303]
gi|298287743|gb|ADI73709.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanohalobium
evestigatum Z-7303]
Length = 255
Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 115/193 (59%), Gaps = 6/193 (3%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + + A+ EG+R+R+AYKLLQIN + +++ N IVDLG++PG W QVA +I+ +
Sbjct: 4 KKDSFYRLAKDEGYRSRAAYKLLQINNRFNVIEKNDTIVDLGAAPGGWLQVARKISNN-- 61
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
+VV ID+ ++ I GV+ K D + + ++ D+V+SD A G+
Sbjct: 62 ---KVVGIDLQRIKSIEGVETVKGDMTSDRTVRKILKTIEDEGVDVVISDAAPNLSGNWN 118
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+DH R++ L E+A FA ++L G+F+VK FQG ND L +K +F V +P ASR
Sbjct: 119 LDHARSIDLVESALEFAKQVLKPSGNFVVKVFQGDMFNDFLEKVKNNFAYVKAHEPKASR 178
Query: 213 AESVEMFLLAKGF 225
++S E++++ F
Sbjct: 179 SQSAEIYVIGMDF 191
>gi|297618952|ref|YP_003707057.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus voltae A3]
gi|297377929|gb|ADI36084.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus voltae A3]
Length = 298
Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
+ W+ + D Y A+ +R+R+ YKL Q+NEK ++ + ++DLG +PG W Q
Sbjct: 3 KKDKRWVLQRKRDFYYNLAKKNQYRSRATYKLFQLNEKFNFIKEDNVVIDLGCAPGGWLQ 62
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM 143
A I G + + + ++ V K D + + + NPD+++ D
Sbjct: 63 SAREIVGEDGFVVGIDLQKVKPLKY-DNVVAIKGDMTKEEVLKEALSYLPRNPDVIICDA 121
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G +DH ++ L A + +L GG+F+VK FQG N L+ +F KV
Sbjct: 122 SPNVSGVWDVDHTCSLILTTMALMTSTRVLKRGGNFVVKVFQGDLFNKYTDLVGTYFDKV 181
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
I KP ASR ES E++++ + F
Sbjct: 182 ITTKPKASRGESAEVYVIGRRF 203
>gi|289581714|ref|YP_003480180.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Natrialba magadii ATCC
43099]
gi|289531267|gb|ADD05618.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Natrialba magadii ATCC
43099]
Length = 273
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y +A+ EG+R+R+AYKL Q+++ ++ +VDLG++PG W +VAA G
Sbjct: 3 RKDHYYNKAKQEGYRSRAAYKLKQLDQLENVISGGDTVVDLGAAPGGWLEVAAEAVGPQG 62
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA---------------IGGNPDL 138
V I D + ++ + D + + E + +A GG D+
Sbjct: 63 QVIGVDLQRIRDFDDHDTIETLRGDMTEERTRERVIEAAGGDVESAETATDAGTGGPVDV 122
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R++ L A ALE+L GDF+VK F+G +D +++
Sbjct: 123 VISDMAPNMSGEYSLDQARSLHLARQAFETALELLATDGDFIVKVFEGPDVDDFRADVEE 182
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKG 224
FQ V P ASR ES E++ + KG
Sbjct: 183 EFQYVRATSPKASRDESSEIYFIGKG 208
>gi|197097760|ref|NP_001125667.1| putative rRNA methyltransferase 3 [Pongo abelii]
gi|73621845|sp|Q5RAS1|RRMJ3_PONAB RecName: Full=Putative rRNA methyltransferase 3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|55728800|emb|CAH91139.1| hypothetical protein [Pongo abelii]
Length = 841
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|328856745|gb|EGG05865.1| hypothetical protein MELLADRAFT_48684 [Melampsora larici-populina
98AG31]
Length = 884
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y + A+ +G+RARSA+KL+Q+N+++Q L+S R +DL ++PG W QVAA+ +N
Sbjct: 14 DKYYRLAKEQGYRARSAFKLIQLNKRYQFLESARCCIDLCAAPGGWLQVAAKWMPAN--- 70
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D++ ++PI V D ++R + D+VL D A D
Sbjct: 71 SLILGVDLVPIKPIPKVVTATEDIRTDSCRRWLRSELKDWKADVVLHDGAPNVGTAWVQD 130
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A EML GG F+ K F+ N +L + + F+KV KP +SR
Sbjct: 131 AFSQAELVLHSFKLATEMLAPGGTFVTKVFRSKDYNSLLYVFNQLFKKVESTKPPSSRNV 190
Query: 215 SVEMFLLAKGF 225
S E+F++ + F
Sbjct: 191 SAEIFVVCQDF 201
>gi|195036840|ref|XP_001989876.1| GH18555 [Drosophila grimshawi]
gi|193894072|gb|EDV92938.1| GH18555 [Drosophila grimshawi]
Length = 356
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D + + A+ +GWRARSA+KLLQ +E +L+ R VDL ++PG WSQV +R
Sbjct: 5 SKDKRDIFYRLAKEQGWRARSAFKLLQADETFNLLEGVERAVDLCAAPGGWSQVLSRRMY 64
Query: 91 -----SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+++A+D M PI GV + D + + I + GG LV+SD A
Sbjct: 65 EPRTVEEREKVKIIAVDTQGMAPIDGVTQLRADITKESTADAIIEFFGGKKAQLVVSDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G D L +A A +L GG F+ K ++ T+ + L++ F+ V
Sbjct: 125 PDVTGSHDWDAYMQAQLLLSALSIATYILEEGGSFMGKVYRAANTSKVYLQLQRFFKDVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR S+E F++A+ F
Sbjct: 185 VFKPSASRNSSIEAFVVARQF 205
>gi|308161650|gb|EFO64088.1| FtsJ-like protein [Giardia lamblia P15]
Length = 268
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 5/198 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+++ D Y + A+ EGWRARSAYKLLQ++ ++ + + R VDL ++PGSWSQV +
Sbjct: 1 MSKDKRDIYYRLAKDEGWRARSAYKLLQLDAQYDLFRGVTRAVDLCAAPGSWSQVLSHKL 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLVLSDMAYPTI 148
++A ++++D+ M P+ V + D + + I + G LV+ D A
Sbjct: 61 PADA---VIISVDLAPMAPLPRVTQIQGDITRKEVADKITELCHGEMCQLVVCDGAPDVT 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL-LKKHFQKVIHVK 207
G +D L + A A ++L G F+ K F+G +L F+ V K
Sbjct: 118 GVHDLDEYVQAGLVDHAMALARQILAPDGTFVSKVFRGECLESLLRRNALSFFKNVDISK 177
Query: 208 PVASRAESVEMFLLAKGF 225
P ASRA S+E F++ +G+
Sbjct: 178 PDASRASSMECFMVCRGY 195
>gi|50289623|ref|XP_447243.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526552|emb|CAG60176.1| unnamed protein product [Candida glabrata]
Length = 309
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR--RIVDLGSSPGSW 81
SS+D D Y ++A+ EG+RARSAYKLLQ+NE+ L R+VDL ++PGSW
Sbjct: 3 KSSKD-----KRDLYYRKAKEEGYRARSAYKLLQLNEEFHFLDDPELKRVVDLCAAPGSW 57
Query: 82 SQVAARITGSNANNT--------RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
SQV +R + +++A+D+ M PI V + D + E I + G
Sbjct: 58 SQVLSRKLFAEREPVADGQEDDRKIIAVDLQPMSPIDHVITLQADITHPRTLERIYELFG 117
Query: 134 GNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D V SD A G +D L +A +L GG F+ K F+G + +
Sbjct: 118 NQKADFVCSDGAPDVTGLHDLDEYIQHQLIMSALQLTTCVLKRGGTFVAKIFRGRDIDML 177
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L F+K++ KP +SR S+E F++ G+
Sbjct: 178 YSQLGYLFEKIVCAKPRSSRGTSLEAFIVCIGY 210
>gi|71987550|ref|NP_497656.2| hypothetical protein H06I04.3 [Caenorhabditis elegans]
gi|60543537|gb|AAX22286.1| Hypothetical protein H06I04.3b [Caenorhabditis elegans]
Length = 716
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 113/216 (52%), Gaps = 15/216 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +KVK + + D Y + A+ G+R+R+A+KL+Q+N++ + L+ +R V
Sbjct: 1 MGKKVK-----------IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATV 49
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QA 131
DL ++PG W QVA++ + + +V +D+ ++PI + D ++ I+ +
Sbjct: 50 DLCAAPGGWMQVASQFMPVS---SLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKEL 106
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+ D VL D A + D + L +A A ++L GG F+ K F+ +
Sbjct: 107 KTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSC 166
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ + +K F++V KP ASR ES E+F++ + ++K
Sbjct: 167 LIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQK 202
>gi|239907722|ref|YP_002954463.1| ribosomal RNA large subunit methyltransferase J [Desulfovibrio
magneticus RS-1]
gi|239797588|dbj|BAH76577.1| ribosomal RNA large subunit methyltransferase J [Desulfovibrio
magneticus RS-1]
Length = 216
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 1/191 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y +A+ + + ARS YKL +I ++ ++L ++DLG+ PGSWS AA+ G +
Sbjct: 8 RDHYFNKAKQDNYPARSVYKLEEIEKQSRLLTPGAAVLDLGACPGSWSLYAAKRVGPSGR 67
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V ++ V + D L+ G D+VLSDMA TIGH+ D
Sbjct: 68 VLAVD-LNPAATAFPGNVTYLIGDMLEPGPDIAEAFERFGPFDVVLSDMAPKTIGHKFTD 126
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ LCEAA A+ L GG F+VK FQG + L+++F V KP +SRAE
Sbjct: 127 QARSLELCEAALSVAVTRLKPGGAFVVKIFQGPDSPAFQKGLRQYFSAVRVAKPKSSRAE 186
Query: 215 SVEMFLLAKGF 225
S E+F +A GF
Sbjct: 187 SKEIFFVATGF 197
>gi|311266963|ref|XP_003131335.1| PREDICTED: putative rRNA methyltransferase 3-like [Sus scrofa]
Length = 836
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLGRGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|194894024|ref|XP_001977991.1| GG17939 [Drosophila erecta]
gi|190649640|gb|EDV46918.1| GG17939 [Drosophila erecta]
Length = 816
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + Q A+ G R+R+A+KL+Q+N K LQ ++ +DL ++PG W QVA + +
Sbjct: 11 RKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D+ + PI G D + ++ D+VL D A +
Sbjct: 70 --SIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWL 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + + L A + + L GG F+ K F+ N +L +LK+ F+KV KP ASR
Sbjct: 128 YDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASR 187
Query: 213 AESVEMFLLAKGF 225
ES E+F++ +G+
Sbjct: 188 KESAEIFVVCQGY 200
>gi|194097365|ref|NP_060117.3| putative rRNA methyltransferase 3 [Homo sapiens]
gi|296452883|sp|Q8IY81|RRMJ3_HUMAN RecName: Full=Putative rRNA methyltransferase 3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|119614679|gb|EAW94273.1| FtsJ homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
gi|119614680|gb|EAW94274.1| FtsJ homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
gi|119614681|gb|EAW94275.1| FtsJ homolog 3 (E. coli), isoform CRA_a [Homo sapiens]
Length = 847
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQQDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|164656501|ref|XP_001729378.1| hypothetical protein MGL_3413 [Malassezia globosa CBS 7966]
gi|159103269|gb|EDP42164.1| hypothetical protein MGL_3413 [Malassezia globosa CBS 7966]
Length = 902
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + A+ +G+R+R+A+KL+Q+N+K+ L++ +DL ++PG W QVA++ N
Sbjct: 14 DKFYWLAKEQGYRSRAAFKLVQLNKKYNFLENAHCCIDLCAAPGGWLQVASKHMPPN--- 70
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D++ ++PI F D E +++ + D+VL D A D
Sbjct: 71 SLILGVDLVAIKPIPRCITFAEDINSYRCREQLQEHMKDWKADVVLHDGAPNVGTAWVQD 130
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A+E L GG F+ K F+ N+++ + ++ F V KP +SR
Sbjct: 131 AYAQNELTLQSLRLAVEFLVPGGTFVTKVFRSKDYNNLMWVFQQLFHHVEATKPPSSRNV 190
Query: 215 SVEMFLLAKGFR 226
S E+F++ + F+
Sbjct: 191 SAEIFVVCQRFK 202
>gi|261403094|ref|YP_003247318.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
vulcanius M7]
gi|261370087|gb|ACX72836.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
vulcanius M7]
Length = 248
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 108/204 (52%), Gaps = 4/204 (1%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
S+ W + D Y + A+ +R+R+++KL+Q+NEK +++ + I+DLG +PG W QV
Sbjct: 4 KSKRWYLQRKRDFYYKLAKKLQYRSRASFKLMQLNEKFNVIKPRKIILDLGCAPGGWMQV 63
Query: 85 AARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL---VLS 141
A I G + V + V K DF ++ IR+ I V+S
Sbjct: 64 AREIVGDDGFVIGVDLQPVKPFGY-DNVVAIKGDFTSEETLNKIRELIPNEEKKVDVVIS 122
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D + G+ +DH R++ L A A EML G+F+ K F G +D + L+KK+F+
Sbjct: 123 DASPNISGYWDVDHARSIDLVTTALQIATEMLKERGNFVAKVFYGDMIDDYVKLVKKYFE 182
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
KV KP ASR ES E++++AK +
Sbjct: 183 KVYITKPQASRKESAEVYVIAKRY 206
>gi|18028291|gb|AAL56015.1|AF327355_1 hypothetical protein SB92 [Homo sapiens]
Length = 847
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|23331072|gb|AAH36710.1| FtsJ homolog 3 (E. coli) [Homo sapiens]
gi|123983012|gb|ABM83247.1| FtsJ homolog 3 (E. coli) [synthetic construct]
gi|123997695|gb|ABM86449.1| FtsJ homolog 3 (E. coli) [synthetic construct]
gi|189054652|dbj|BAG37502.1| unnamed protein product [Homo sapiens]
gi|307685131|dbj|BAJ20496.1| FtsJ homolog 3 [synthetic construct]
Length = 847
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|71020429|ref|XP_760445.1| hypothetical protein UM04298.1 [Ustilago maydis 521]
gi|73621943|sp|Q4P6G5|SPB1_USTMA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|46100114|gb|EAK85347.1| hypothetical protein UM04298.1 [Ustilago maydis 521]
Length = 921
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 13/215 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +K + ++ +G D + A+ +G+R+R+A+KL+Q+N+K L+ R +
Sbjct: 1 MGKKQEKKTAKG---------RLDKFYWLAKEQGYRSRAAFKLVQLNKKFNFLEKARCCI 51
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA- 131
DL ++PG W QVA++ +N + +V +D++ ++PI F D + +RQ
Sbjct: 52 DLCAAPGGWLQVASKFMPAN---SLIVGVDLVPIKPIPRTITFAEDINSYKCRDQLRQIL 108
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+V+ D A D L + A+E L GG F+ K F+ N+
Sbjct: 109 KDWKADIVIHDGAPNVGTAWVQDAYAQSELTLQSLRLAVEFLTAGGTFVTKVFRSKDYNN 168
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L + + F+KV KP +SR S E+F++ +G++
Sbjct: 169 LLWVFNQLFKKVEATKPSSSRNVSAEIFVVCQGYK 203
>gi|195500126|ref|XP_002097241.1| GE24604 [Drosophila yakuba]
gi|194183342|gb|EDW96953.1| GE24604 [Drosophila yakuba]
Length = 302
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 8/203 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI-- 88
++ D Y ++A+ EGWRARSA+KLL ++E + IL +R VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLY 64
Query: 89 ----TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DLVLSD 142
T +++A+D+ M PI G+ + D + E I GGN LV+ D
Sbjct: 65 DACETDDEKAAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCD 124
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A G ++D L AA A +L GG F+ K F+G T+ + ++ F+K
Sbjct: 125 GAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKK 184
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
KP +SR S+E F++ F
Sbjct: 185 FDIYKPPSSRPSSIEAFVVCSDF 207
>gi|295670405|ref|XP_002795750.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides
brasiliensis Pb01]
gi|226284835|gb|EEH40401.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides
brasiliensis Pb01]
Length = 825
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYP 146
S + +V +D+ ++PI V F+ D + D VL D A
Sbjct: 65 CMPS---QSLIVGVDLAPIKPIPKVITFQSDITTDKCRATIRQHFKSWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGVAWVQDAFSQAELVLQSLKLATEFLTPGGTFVTKVFRSKDYNPLLWVFKQLFATVKAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ GF+
Sbjct: 182 KPPSSRNVSAEIFVVCLGFK 201
>gi|169614552|ref|XP_001800692.1| hypothetical protein SNOG_10422 [Phaeosphaeria nodorum SN15]
gi|111060696|gb|EAT81816.1| hypothetical protein SNOG_10422 [Phaeosphaeria nodorum SN15]
Length = 836
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVA+
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYP 146
+ + + +V +D+ ++PI F+ D + D VL D A
Sbjct: 65 VMPA---QSLIVGVDLAPIKPIPRCITFQSDITTDKCRATLRQHLKHFKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + + F KV
Sbjct: 122 VGTAWVQDAFTQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNSLLWVFNQLFTKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +G++
Sbjct: 182 KPPSSRNVSAEIFVVCRGYK 201
>gi|115496334|ref|NP_001068830.1| putative rRNA methyltransferase 3 [Bos taurus]
gi|109659216|gb|AAI18407.1| FtsJ homolog 3 (E. coli) [Bos taurus]
Length = 834
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ +S G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKSKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWAHDAYSQAHLTLMALRLACDFLGRGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|18859957|ref|NP_573099.1| CG8939 [Drosophila melanogaster]
gi|7293173|gb|AAF48557.1| CG8939 [Drosophila melanogaster]
gi|17862372|gb|AAL39663.1| LD23718p [Drosophila melanogaster]
gi|220944838|gb|ACL84962.1| CG8939-PA [synthetic construct]
Length = 817
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + Q A+ G R+R+A+KL+Q+N K LQ ++ +DL ++PG W QVA + +
Sbjct: 11 RKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D+ + PI G D + ++ D+VL D A +
Sbjct: 70 --SIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWL 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + + L A + + L GG F+ K F+ N +L +LK+ F+KV KP ASR
Sbjct: 128 YDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASR 187
Query: 213 AESVEMFLLAKGF 225
ES E+F++ +G+
Sbjct: 188 KESAEIFVVCQGY 200
>gi|50550277|ref|XP_502611.1| YALI0D09251p [Yarrowia lipolytica]
gi|73621944|sp|Q6C9Q1|SPB1_YARLI RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|49648479|emb|CAG80799.1| YALI0D09251p [Yarrowia lipolytica]
Length = 850
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/201 (29%), Positives = 110/201 (54%), Gaps = 8/201 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSPGSWSQVAA 86
+H D Y + A+ +G+RARS++K++QIN+K+ + L+ ++ ++DL ++PGSW QVA+
Sbjct: 6 KKHGKGRLDHYYRLAKEKGYRARSSFKIIQINQKYGKFLEKSKVVIDLCAAPGSWCQVAS 65
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPDLVLSDMAY 145
++ N + ++ DI+ ++P+ V F+ D + +RQ + D V+ D A
Sbjct: 66 QLCPVN---SLIIGCDIVPIKPLPNVITFQSDITTDHCRQQLRQYMKTWKADTVMHDGAP 122
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
D L + A+E LN GG F+ K F+ N+++ + ++ F+KV
Sbjct: 123 NVGMAWAQDAFTQSELVLQSLKLAVEFLNKGGTFVTKVFRSKDYNNLMWVFQQFFEKVEA 182
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ F+
Sbjct: 183 TKPPSSRNVSAEIFVVCLKFK 203
>gi|292625927|ref|XP_002666179.1| PREDICTED: putative rRNA methyltransferase 3 isoform 1 [Danio
rerio]
Length = 838
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + A+ G+R+RS++KL+Q+N K Q LQ R +VDL ++PG W QVA++ +
Sbjct: 11 RKDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D++ ++PI V + D + ++ D+VL+D A + +
Sbjct: 70 --SLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGANWQ 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D +L A A E L GG F+ K F+ ++ + ++ F+KV KP ASR
Sbjct: 128 HDAFSQANLTLMALKLACEFLAKGGTFITKVFRSKDYQPLMWIFQQFFKKVQATKPQASR 187
Query: 213 AESVEMFLLAKGF 225
ES E+F++ +GF
Sbjct: 188 NESAEIFVVCQGF 200
>gi|116206520|ref|XP_001229069.1| hypothetical protein CHGG_02553 [Chaetomium globosum CBS 148.51]
gi|88183150|gb|EAQ90618.1| hypothetical protein CHGG_02553 [Chaetomium globosum CBS 148.51]
Length = 754
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QV A
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVCAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYP 146
++ +V +D+ ++PI V F+ D IR D VL D A
Sbjct: 65 TMP---KDSIIVGVDLAPIKPIPKVITFQSDITTEKCRATIRTHLKTWKADCVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L +L + F KV
Sbjct: 122 VGTAWVQDSYNQAELALHSLKLATEFLIEGGTFVTKVFRSKDYNSLLWVLNQLFTKVHAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ GF+
Sbjct: 182 KPPSSRNVSAEIFVVCLGFK 201
>gi|327297282|ref|XP_003233335.1| rRNA methyltransferase [Trichophyton rubrum CBS 118892]
gi|326464641|gb|EGD90094.1| rRNA methyltransferase [Trichophyton rubrum CBS 118892]
Length = 834
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA S
Sbjct: 35 DKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPS---Q 91
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ +V +D+ ++PI V F+ D + D VL D A D
Sbjct: 92 SLIVGVDLSPIKPIPKVITFQSDITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQD 151
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 152 AFSQAELVLQSLKLATEFLVPGGSFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNV 211
Query: 215 SVEMFLLAKGFR 226
S E+F++ GF+
Sbjct: 212 SAEIFVVCLGFK 223
>gi|331226587|ref|XP_003325963.1| AdoMet-dependent rRNA methyltransferase SPB1 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
gi|309304953|gb|EFP81544.1| AdoMet-dependent rRNA methyltransferase SPB1 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 892
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y + A+ +G+RARSA+KL+Q+N+++Q L+S R +DL ++PG W QVAA+ +N
Sbjct: 14 DKYYRLAKEQGYRARSAFKLIQLNKRYQFLESARCCIDLCAAPGGWLQVAAKWMPAN--- 70
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D++ ++PI V D ++R + D+VL D A D
Sbjct: 71 SLILGVDLVPIKPIPKVVTATEDIRTQSCRMWLRSELKDWKADVVLHDGAPNVGTAWVQD 130
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A EML G F+ K F+ N +L + + F+KV KP +SR
Sbjct: 131 AFSQSELVLHSLKLATEMLAQNGTFITKVFRSKDYNSLLYIFNQLFKKVEATKPPSSRNV 190
Query: 215 SVEMFLLAKGF 225
S E+F++ +G+
Sbjct: 191 SAEIFVVCQGY 201
>gi|332848815|ref|XP_003315725.1| PREDICTED: putative rRNA methyltransferase 3 isoform 1 [Pan
troglodytes]
Length = 847
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|225711000|gb|ACO11346.1| ribosomal RNA methyltransferase CG11447 [Caligus rogercresseyi]
Length = 251
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 72/204 (35%), Positives = 110/204 (53%), Gaps = 7/204 (3%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
S W+ R D YV++A+ EG+RARSAYKLL++++K +IL+ N +++ G +PG+W+QV
Sbjct: 49 SSSWIRRQAKDIYVKKARSEGYRARSAYKLLEMDDKLKILRPNMNVMECGGAPGAWTQVL 108
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQA--IGGNPDLVLSD 142
S +++ D+LD EP+ DF + + I DLVLSD
Sbjct: 109 TERVSS----GMIISCDLLDYEPVGHAIILPNSDFTSPSTQDTILSHLGKSSGFDLVLSD 164
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
MA G +++H + ++L AT FAL G FL K + G L L++ +
Sbjct: 165 MAPNASGMAELNHGQILNLSYEATKFALRHSKPGAAFLTKLWNGNGLEGYLTDLRRFYNN 224
Query: 203 VIHVKPVASRAESVEMFLLAKGFR 226
V VKP +SR ES E+F+ A F+
Sbjct: 225 VQVVKPKSSRKESAELFIYASKFK 248
>gi|302698005|ref|XP_003038681.1| hypothetical protein SCHCODRAFT_64580 [Schizophyllum commune H4-8]
gi|300112378|gb|EFJ03779.1| hypothetical protein SCHCODRAFT_64580 [Schizophyllum commune H4-8]
Length = 869
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y + A+ +G+RARSA+KL+Q+N+K+ L++ R +DL ++PG W QVA++ +N+
Sbjct: 14 DKYYKLAKEQGYRARSAFKLIQLNKKYNFLETARCCIDLCAAPGGWLQVASKHMPNNS-- 71
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGHRKID 154
V +D++ ++PI V F D +R + D+VL D A D
Sbjct: 72 VIVAGVDLVPIKPIPRVVTFAADITTTHCRNLLRGELKDWKADVVLHDGAPNVGTAWIQD 131
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A+E L GG F+ K F+ N+++ + + F KV KP +SR
Sbjct: 132 AYTQSELVLMSLKLAVEFLVKGGTFVTKVFRSTDYNNLIWVFSQLFGKVEATKPPSSRNV 191
Query: 215 SVEMFLLAKGF 225
S E+F++ + F
Sbjct: 192 SAEIFVVCRDF 202
>gi|24647580|ref|NP_650590.1| CG5220 [Drosophila melanogaster]
gi|9910870|sp|Q9VEP1|RMJ1A_DROME RecName: Full=Putative ribosomal RNA methyltransferase CG5220;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|7300216|gb|AAF55380.1| CG5220 [Drosophila melanogaster]
gi|25012244|gb|AAN71236.1| LD21957p [Drosophila melanogaster]
gi|220943874|gb|ACL84480.1| CG5220-PA [synthetic construct]
gi|220953752|gb|ACL89419.1| CG5220-PA [synthetic construct]
Length = 302
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 8/203 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI-- 88
++ D Y ++A+ EGWRARSA+KLL ++E + IL +R VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRQAKDEGWRARSAFKLLHVDEAYGILNGVQRAVDLCAAPGSWSQVLSRKLY 64
Query: 89 ----TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DLVLSD 142
T + +++A+D+ M PI G+ + D + E I GGN LV+ D
Sbjct: 65 DTCETDDEKSAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVCD 124
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A G ++D L AA A +L GG F+ K F+G T+ + ++ F+K
Sbjct: 125 GAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFKK 184
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
KP +SR S+E F++ F
Sbjct: 185 FDIYKPPSSRPSSIEAFVVCSDF 207
>gi|194749909|ref|XP_001957378.1| GF10393 [Drosophila ananassae]
gi|190624660|gb|EDV40184.1| GF10393 [Drosophila ananassae]
Length = 817
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + Q A+ G+R+R+A+KL+Q+N K LQ ++ +DL ++PG W QVA + +
Sbjct: 11 RKDKFYQLAKETGFRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D+ + PI G D + ++ D+VL D A +
Sbjct: 70 --SIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQTWKADVVLHDGAPNVGRNWI 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + + L + A + L GG F+ K F+ N +L +LK+ F+KV KP ASR
Sbjct: 128 YDAYQQICLTLNSLKLATQFLRSGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASR 187
Query: 213 AESVEMFLLAKGF 225
ES E+F++ +G+
Sbjct: 188 KESAEIFVVCQGY 200
>gi|70997385|ref|XP_753441.1| rRNA methyltransferase Spb1 [Aspergillus fumigatus Af293]
gi|73621934|sp|Q4WVH3|SPB1_ASPFU RecName: Full=AdoMet-dependent rRNA methyltransferase spb1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|66851077|gb|EAL91403.1| rRNA methyltransferase Spb1, putative [Aspergillus fumigatus Af293]
gi|159126832|gb|EDP51948.1| rRNA methyltransferase Spb1, putative [Aspergillus fumigatus A1163]
Length = 795
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+ + ++ +D+ ++PI V F+ D IRQ D VL D A
Sbjct: 65 CMPT---QSIIIGVDLAPIKPIPRVITFQSDITTEKCRATIRQHLKHWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGTAWVQDAFSQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFTSVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|195450026|ref|XP_002072331.1| GK22383 [Drosophila willistoni]
gi|194168416|gb|EDW83317.1| GK22383 [Drosophila willistoni]
Length = 305
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/201 (33%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR--- 87
++ D + + A+ +GWRARSA+KLLQ E +L R VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIFYRLAKQQGWRARSAFKLLQAEETFHLLDGVTRAVDLCAAPGSWSQVLSKHMY 64
Query: 88 --ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
T +++A+D+ M PI GVK + D + + I + GG LV+SD A
Sbjct: 65 EPRTPEEREQVKIIAVDMQGMAPIDGVKQLRADITKESTAKEIIEYFGGQKAQLVISDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G D L AA A +L GG F+ K ++ G + + ++ F+ V
Sbjct: 125 PDVTGQHDRDAYMQGQLLLAALSIATYILEEGGSFVGKVYRAGDISSVYAQFQRFFKDVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR S+E F++A+ F
Sbjct: 185 LFKPSASRNSSIEAFVVARQF 205
>gi|212704983|ref|ZP_03313111.1| hypothetical protein DESPIG_03051 [Desulfovibrio piger ATCC 29098]
gi|212671647|gb|EEB32130.1| hypothetical protein DESPIG_03051 [Desulfovibrio piger ATCC 29098]
Length = 220
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 96/195 (49%), Gaps = 1/195 (0%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +A+ E + ARS YKL +++ K ++ + R++DLG++PGSWS AA G
Sbjct: 2 KEYRDHYFLKAKRENYPARSVYKLKELDAKFKLFRQGMRVLDLGAAPGSWSLGAAEKVGQ 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
I + V F + D + R G D+V+SDMA T G +
Sbjct: 62 RGLVLGCD-IQTTETAFPPQVTFMQEDVFNRSDAFEARLREMGPFDVVMSDMAPRTTGTK 120
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D R++ L A A L GG F+VK F G ++L +++ F+ V KP +S
Sbjct: 121 FTDQARSLELACEALEVARLHLKPGGSFIVKIFMGPDIQEMLQPMRRAFKAVKSFKPKSS 180
Query: 212 RAESVEMFLLAKGFR 226
RAES E F + GF+
Sbjct: 181 RAESKETFFVGMGFK 195
>gi|195357054|ref|XP_002044929.1| GM11680 [Drosophila sechellia]
gi|194124271|gb|EDW46314.1| GM11680 [Drosophila sechellia]
Length = 817
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + Q A+ G R+R+A+KL+Q+N K LQ ++ +DL ++PG W QVA + +
Sbjct: 11 RKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D+ + PI G D + ++ D+VL D A +
Sbjct: 70 --SIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWL 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + + L A + + L GG F+ K F+ N +L +LK+ F+KV KP ASR
Sbjct: 128 YDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASR 187
Query: 213 AESVEMFLLAKGF 225
ES E+F++ +G+
Sbjct: 188 KESAEIFVVCQGY 200
>gi|169844171|ref|XP_001828807.1| RNA methyltransferase [Coprinopsis cinerea okayama7#130]
gi|116510178|gb|EAU93073.1| RNA methyltransferase [Coprinopsis cinerea okayama7#130]
Length = 882
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y + A+ +G+RARSA+KL+Q+N+K+ L+S R +DL ++PG W QVA++ N
Sbjct: 14 DKYYKLAKEQGYRARSAFKLIQLNKKYGFLESARCTIDLCAAPGGWLQVASKYMPPN--- 70
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D++ ++PI V F D ++R + D+VL D A D
Sbjct: 71 SLIIGVDLVPIKPIPRVITFASDITTTQCRNYLRGEMKDWKADVVLHDGAPNVGTAWVQD 130
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A+E L GG F+ K F+ N ++ + + F KV KP +SR
Sbjct: 131 AYSQSELVLMSLKLAVEFLAKGGTFVTKVFRSVDYNSLIWVFSQLFSKVEATKPPSSRNV 190
Query: 215 SVEMFLLAKGF 225
S E+F++ + F
Sbjct: 191 SAEIFVVCRDF 201
>gi|71029650|ref|XP_764468.1| rRNA methyltransferase [Theileria parva strain Muguga]
gi|68351422|gb|EAN32185.1| rRNA methyltransferase, putative [Theileria parva]
Length = 924
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 11/211 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+K ++ G +R D Y A+ G+R+RSA+K++Q+ +K I Q+ +VDL +
Sbjct: 1 MKTKTKTGKNRL-------DKYYHLAKEHGYRSRSAFKIIQLAKKFNIFQNCNVLVDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-N 135
+PG W QVA+ + + ++ +D++ ++PI GV F+ D I + G +
Sbjct: 54 APGGWLQVASNQLPVS---STIIGVDLVPIKPIKGVITFQADIRTPKCHSLITNQLNGLS 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL D + + +D L A A +L GG F+ K F+ N ++ +
Sbjct: 111 VDVVLHDGSPNMGCNWNLDAFNQNVLVLTAAKLACSLLRKGGIFVTKVFRSSDYNSLVWM 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L F++V KP +SR S E+F + GF+
Sbjct: 171 LGNCFERVKVTKPQSSRNVSAEIFAVCIGFK 201
>gi|88812982|ref|ZP_01128225.1| 23S rRNA Um2552 2'-O-methyltransferase [Nitrococcus mobilis Nb-231]
gi|88789760|gb|EAR20884.1| 23S rRNA Um2552 2'-O-methyltransferase [Nitrococcus mobilis Nb-231]
Length = 190
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 75/185 (40%), Positives = 111/185 (60%), Gaps = 4/185 (2%)
Query: 40 QRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVV 99
+ A +G+R+R+ YKLL+I+++ ++L ++DLG++PGSWSQ G+ RV+
Sbjct: 2 RAAHKQGYRSRAVYKLLEIDQRDRLLHRGMTVIDLGAAPGSWSQYCVERLGAT---GRVI 58
Query: 100 AIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRT 158
A+DIL M+P+ GV+ + DF D + + + G P LVLSDMA G ID R
Sbjct: 59 ALDILPMQPLPGVEVLQADFRDAKTLTELINRVEGRPVHLVLSDMAPNISGVTAIDQPRA 118
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
M L E A A ++L G FL+K FQG +D L L++ F+KV+ KP ASR S E+
Sbjct: 119 MRLAEEALELACQVLVGNGSFLIKGFQGEGFDDYLQRLRECFRKVVIRKPKASRERSREV 178
Query: 219 FLLAK 223
+LLA+
Sbjct: 179 YLLAR 183
>gi|256809981|ref|YP_003127350.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
fervens AG86]
gi|256793181|gb|ACV23850.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
fervens AG86]
Length = 246
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 67/202 (33%), Positives = 109/202 (53%), Gaps = 4/202 (1%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
+ W+ + D Y + A+ +R+R+++KL+Q+NEK +++ R ++DLG +PG W QVA
Sbjct: 6 KRWVLQRKRDFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGRIVLDLGCAPGGWMQVAR 65
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL---VLSDM 143
I G + + E V+ K DF ++ IR+ I V+SD
Sbjct: 66 EIVGDKGFVIGIDLQPVKPFEY-DNVRAIKGDFTLEENLNKIRELIPNEEKKVDVVISDA 124
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G+ +DH R++ L A A EML G+F+ K F G +D + L+KK+F+KV
Sbjct: 125 SPNISGYWDVDHARSIDLVTTALQIATEMLKERGNFVAKVFYGNMIDDYVKLVKKYFEKV 184
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP ASR ES E++++AK +
Sbjct: 185 YITKPQASRKESAEVYVIAKRY 206
>gi|15029842|gb|AAH11144.1| Ftsj1 protein [Mus musculus]
Length = 308
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ +L+S +R V + ++P + V + G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFSLLESVKRAVAVCAAPFFFFFVRLQKAG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLV-LSDMAYPTIG 149
+ +VVA+D+ M P GV + D L + + I Q G P L + + A G
Sbjct: 65 -GHGSGQVVAVDLQAMAPQPGVIQIQGDITQLSTAKEIIQHFEGCPALFAVCEGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L +GG F+ K F+G + L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKLGGCFVAKIFRGRDVTLLYSQLRIFFPSVLCAKPK 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|134046035|ref|YP_001097521.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C5]
gi|189040313|sp|A4FYM2|RLME_METM5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|132663660|gb|ABO35306.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanococcus maripaludis
C5]
Length = 258
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
+ W+ + ND Y A+ +R+R+ YKL Q+NEK +++ +VDLG +PG W Q
Sbjct: 3 KKDKRWVLQRKNDHYYNLAKKRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQ 62
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM 143
A I G + + + V K D + + R + PD+++ D
Sbjct: 63 AARDIVGDKGFIVGIDLQTVKPLPY-ENVIAIKGDMTKEEILKQARDLLPEKPDVIICDA 121
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G +DH R++ L A A +ML GG+F+VK FQG + L+ ++F K
Sbjct: 122 SPNISGVWDVDHARSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKA 181
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP ASR ES E++++ K F
Sbjct: 182 FTTKPRASRDESAEVYVIGKRF 203
>gi|13384672|ref|NP_079586.1| putative rRNA methyltransferase 3 [Mus musculus]
gi|73621844|sp|Q9DBE9|RRMJ3_MOUSE RecName: Full=Putative rRNA methyltransferase 3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|12836606|dbj|BAB23730.1| unnamed protein product [Mus musculus]
gi|74211447|dbj|BAE26467.1| unnamed protein product [Mus musculus]
gi|123242263|emb|CAM23780.1| FtsJ homolog 3 (E. coli) [Mus musculus]
gi|148702334|gb|EDL34281.1| FtsJ homolog 3 (E. coli) [Mus musculus]
Length = 838
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F +V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFHRVQATKPQASRHESAEIFVVCQGF 200
>gi|195479104|ref|XP_002100764.1| GE17245 [Drosophila yakuba]
gi|194188288|gb|EDX01872.1| GE17245 [Drosophila yakuba]
Length = 819
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + Q A+ G R+R+A+KL+Q+N K LQ ++ +DL ++PG W QVA + +
Sbjct: 11 RKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D+ + PI G D + ++ D+VL D A +
Sbjct: 70 --SIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWL 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + + L A + L GG F+ K F+ N +L +LK+ F+KV KP ASR
Sbjct: 128 YDAYQQICLTLNALKLSTLFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKVHATKPSASR 187
Query: 213 AESVEMFLLAKGF 225
ES E+F++ +G+
Sbjct: 188 KESAEIFVVCQGY 200
>gi|150403543|ref|YP_001330837.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C7]
gi|189040314|sp|A6VJR0|RLME_METM7 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150034573|gb|ABR66686.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C7]
Length = 258
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
+ W+ + ND Y A+ +R+R+ YKL Q+NEK +++ +VDLG +PG W Q
Sbjct: 3 KKDKRWVLQRKNDHYYNLAKKRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQ 62
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM 143
A I G + + + V K D + + + + PD+++ D
Sbjct: 63 AARDIVGEKGFIVGIDLQTVKPLPY-ENVIAIKGDMTKEEILKQAKDLLPEKPDVIICDA 121
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G +DH R++ L A A +ML GG+F+VK FQG + L+ ++F K
Sbjct: 122 SPNISGVWDVDHARSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKA 181
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP ASR ES E++++ K F
Sbjct: 182 FTTKPRASRDESAEVYVIGKRF 203
>gi|156550167|ref|XP_001599955.1| PREDICTED: similar to ribosomal RNA methyltransferase [Nasonia
vitripennis]
Length = 832
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 104/203 (51%), Gaps = 6/203 (2%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
S+ + + D Y A+ G+R+R+A+KL+Q+N K + LQ +R +DL ++PG W Q
Sbjct: 3 KKSK--IGKQRRDKYYHLAKETGYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQ 60
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSD 142
VA + + +V +D+ ++P+ G D + R+ D+VL+D
Sbjct: 61 VAHENMPVS---SIIVGVDLFPIKPVPGCIGLIGDITTDKCRIDLARELKTWKADVVLND 117
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A + ID + +L +A A + L GG F+ K F+ N ++ + K+ F+K
Sbjct: 118 GAPNVGKNWLIDAYQQATLTLSALKLATQFLRPGGWFVTKVFRSKDYNPLIWVFKQMFKK 177
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
V KP ASR ES E+F++ + +
Sbjct: 178 VHATKPQASRNESAEIFVVCQHY 200
>gi|195110569|ref|XP_001999852.1| GI24754 [Drosophila mojavensis]
gi|193916446|gb|EDW15313.1| GI24754 [Drosophila mojavensis]
Length = 382
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D + + A+ +GWRARSA+KLLQ +E +L+ R VDL ++PG WSQV ++
Sbjct: 5 SKDRRDIFYRLAKEQGWRARSAFKLLQADETFNLLEGLTRAVDLCAAPGGWSQVLSKRMY 64
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+ +++A+D+ M PI GV + D + E I + G +LV++D A
Sbjct: 65 EPRSEKDREQVKIIAVDMQGMAPIDGVTQLRADITKESTAEEIIKFFDGKKAELVVTDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G D L + A +L GG F+ K ++ T+ + L++ F+ V
Sbjct: 125 PDVTGLHDWDAYMQAELLLSGLSIATYILEEGGTFMGKVYRAANTSRVYLQLQRFFKDVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR+ S+E F++ + F
Sbjct: 185 LFKPSASRSSSIEAFVVCRQF 205
>gi|317027306|ref|XP_001400621.2| ribosomal RNA large subunit methyltransferase J [Aspergillus niger
CBS 513.88]
Length = 270
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 46/249 (18%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS+ W R + D + + A ++G ++R+A+KLLQI+EK+ I +S + +VDLG +PGS
Sbjct: 25 KRFSSSKRWQARQLKDRFTREAAVQGLKSRAAFKLLQIDEKYHIFESGQTVVDLGYAPGS 84
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP---- 136
WSQVA T + RV+ +DI+ +P GV + +FLD + ++R+ +
Sbjct: 85 WSQVAVARTQP---HGRVLGVDIIPAQPPKGVSTIQGNFLDPNIQAYVREFVRDANRGRP 141
Query: 137 ---------------------------------------DLVLSDMAYPTIGHRKIDHLR 157
D+VLSDM T G DH
Sbjct: 142 HPPSTILDAEYDDTQLKSDANASSDKQTDPKQWDRNYSVDVVLSDMMMNTSGISFKDHAG 201
Query: 158 TMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVE 217
+M LC AA F+ E+L GG F+ K +QG + L+K F+KV +KP +SR ES E
Sbjct: 202 SMDLCHAALQFSQEVLRTGGHFVCKFYQGAEDKALEEQLRKLFRKVHRLKPESSRNESKE 261
Query: 218 MFLLAKGFR 226
+ + G +
Sbjct: 262 SYFIGLGRK 270
>gi|15669566|ref|NP_248379.1| cell division protein FtsJ [Methanocaldococcus jannaschii DSM 2661]
gi|3023819|sp|Q58771|RLME_METJA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|1592021|gb|AAB99383.1| cell division protein FtsJ [Methanocaldococcus jannaschii DSM 2661]
Length = 245
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 67/202 (33%), Positives = 109/202 (53%), Gaps = 4/202 (1%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
+ W+ + D Y + A+ +R+R+++KL+Q+NEK +++ + ++DLG +PG W QVA
Sbjct: 6 KRWVLQRKRDFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAR 65
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL---VLSDM 143
I G + + E V K DF ++ IR+ I + V+SD
Sbjct: 66 EIVGDKGFVIGIDLQPVKPFEY-DNVVAIKGDFTLEENLNKIRELIPNDEKKVDVVISDA 124
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G+ IDH R++ L A A EML G+F+ K F G +D + L+KK+F+KV
Sbjct: 125 SPNISGYWDIDHARSIDLVTTALQIATEMLKERGNFVAKVFYGDMIDDYVNLVKKYFEKV 184
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP ASR ES E++++AK +
Sbjct: 185 YITKPQASRKESAEVYVIAKRY 206
>gi|119174478|ref|XP_001239600.1| hypothetical protein CIMG_09221 [Coccidioides immitis RS]
Length = 816
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+ + +V +D+ ++PI V F+ D IRQ D VL D A
Sbjct: 65 CMPTE---SLIVGVDLAPIKPIPRVITFQSDITTDKCRATIRQHLKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGTAWVQDAFSQAELALQSLKLATEFLVAGGTFVTKVFRSKDYNSLLWVFKQLFTSVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|149241908|ref|XP_001526378.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450501|gb|EDK44757.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 334
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-SNRRIVDLGSSPGSWSQVAARI- 88
N+ D Y +RA+ EGWRARSAYKLLQ++++ +L + +R+VDL ++PGSWSQV ++
Sbjct: 5 NKDKRDLYYRRAKEEGWRARSAYKLLQLDQEFNLLNSNVKRVVDLCAAPGSWSQVLSKRL 64
Query: 89 ------------------------------------TGSNANNTRVVAIDILDMEPILGV 112
NA+ ++VA+D+ M PI GV
Sbjct: 65 HSSTTATNNSSTATTPITPTTPTAPTAAAAATTTSSVNVNADAAKIVAVDLQPMTPIEGV 124
Query: 113 KFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
+ D + + I D V SD A G +D L AA
Sbjct: 125 TTIQADITHPKTLQQILDCFDNELADFVCSDGAPDVTGLHDLDEYVQHQLVWAALQLTTC 184
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L GG F K F+G + + K F +V+ KP +SR S+E F++ G+R
Sbjct: 185 ILKPGGSFAAKIFRGKDIDVMYKQFSKFFDRVVCAKPRSSRGTSLEAFIVGLGYR 239
>gi|169779173|ref|XP_001824051.1| AdoMet-dependent rRNA methyltransferase spb1 [Aspergillus oryzae
RIB40]
gi|238499797|ref|XP_002381133.1| rRNA methyltransferase Spb1, putative [Aspergillus flavus NRRL3357]
gi|83772790|dbj|BAE62918.1| unnamed protein product [Aspergillus oryzae]
gi|220692886|gb|EED49232.1| rRNA methyltransferase Spb1, putative [Aspergillus flavus NRRL3357]
Length = 802
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA +
Sbjct: 13 DKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMPA---Q 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+ ++PI V F+ D IRQ D VL D A D
Sbjct: 70 SIIIGVDLAPIKPIPRVITFQSDITTEKCRTTIRQHLKHWKADTVLHDGAPNVGTAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFSQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNALLWVFKQLFTSVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ +GF+
Sbjct: 190 SAEIFVVCRGFK 201
>gi|224367518|ref|YP_002601681.1| putative ribosomal RNA methyltransferase 1 (23S rRNA methylase)
[Desulfobacterium autotrophicum HRM2]
gi|259494563|sp|C0QGP2|RLME_DESAH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|223690234|gb|ACN13517.1| putative ribosomal RNA methyltransferase 1 (23S rRNA methylase)
[Desulfobacterium autotrophicum HRM2]
Length = 203
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 7/210 (3%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+KNR ++ D Y Q+A+ E + ARS YKL++I ++ Q+++ ++DLG
Sbjct: 1 MKNRGRTKPKKN----QWADHYTQKARDENYPARSVYKLMEIQKRFQVIKKGASVLDLGC 56
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PGSW AA +TG + + + P + F + +A+G +
Sbjct: 57 APGSWLIHAAELTGPSGRAVGIDLKPVDAALPPNAIAHTGDIFEMESTL---GEAVGQDY 113
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
D V+SDMA T G + ID R+ +LCEAA A +L GG+F+ K FQG +
Sbjct: 114 DAVISDMAPATTGRKDIDAARSFALCEAALRVACGLLADGGNFVCKIFQGAEFKQFENQV 173
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F KP + R S E++++ G +
Sbjct: 174 KSRFTSHKIFKPDSCRKSSKEIYIIGLGKK 203
>gi|51854285|gb|AAU10666.1| unknown protein [Oryza sativa Japonica Group]
Length = 749
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 7/199 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + A+ +G+R+R+A+KLLQ++ + + L + R ++DL ++PG W QVA
Sbjct: 7 KQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVAVNHAPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN----PDLVLSDMAYPT 147
A VV +D++ + PI G D +R+ + N D+VL D +
Sbjct: 67 GA---FVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDSNGVAAFDVVLHDGSPNV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + SL A A L G F+ K F+ N I+ LK+ F+KV K
Sbjct: 124 GGAWAQEATAQSSLVIDAVRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQLFEKVEVTK 183
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASR+ S E++++ ++
Sbjct: 184 PTASRSTSAEIYIICLRYK 202
>gi|328770294|gb|EGF80336.1| hypothetical protein BATDEDRAFT_11420 [Batrachochytrium
dendrobatidis JAM81]
Length = 221
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 73/213 (34%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS W NR +DP+V+ R+RSA+KL ++ K+ ++ + ++DLG++PG W+QV
Sbjct: 3 SSGQWFNRQASDPFVKNRIKWNLRSRSAFKLKELQSKYNFMKPGQVVLDLGAAPGGWTQV 62
Query: 85 AARITGSN---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPD---- 137
A + + + RV+A+D+L +EPI G + D + + I
Sbjct: 63 ALDAVWPDRAQSMDGRVIAVDLLPIEPIDGAEILLGDVHEDAVLQQIYTLAAYPYQPEGP 122
Query: 138 ---LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEM--LNIGGDFLVKTFQGGTTNDI 192
+VLSDMA+ GHR D R +LCE A A L GG+FL K +G ++
Sbjct: 123 VVDVVLSDMAHSFTGHRSTDAARVQNLCEFALSVASHPWLLKPGGNFLCKYLRGDGDQEL 182
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L + FQ+VI KP ASR S E + L GF
Sbjct: 183 KKLCQSRFQQVIVTKPKASRQGSAEAYFLCLGF 215
>gi|195355564|ref|XP_002044261.1| GM15097 [Drosophila sechellia]
gi|194129562|gb|EDW51605.1| GM15097 [Drosophila sechellia]
Length = 321
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 108/201 (53%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D + + A+ +GWRARSA+KLLQ +E Q+L+ R VDL ++PGSWSQV A+
Sbjct: 5 SKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRMY 64
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+ +++A+D+ M PI GVK + D + E I + GG +V+SD A
Sbjct: 65 EPLTPEDREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
+ G D L +A + +L GG F+ K ++ T+ + LK+ F+ V
Sbjct: 125 PDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKDVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR S+E F++A+ F
Sbjct: 185 VFKPSASRNSSIEAFVVARKF 205
>gi|149539804|ref|XP_001516553.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
Length = 243
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 79/234 (33%), Positives = 126/234 (53%), Gaps = 10/234 (4%)
Query: 3 KPPGSSSRRGLTQKVKNR---SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
+ P S R V R S + WL+RH+ DP+V+ + +R RSA+KLL+IN
Sbjct: 2 QKPVRSLLRCRRFHVTVRHGGSKTDAEHRWLSRHLKDPFVKATRENNYRCRSAFKLLEIN 61
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKF 114
EK QIL R++D G++PG+WSQVA ++ + + + V+ +D+L + P+ G F
Sbjct: 62 EKQQILSPGLRVLDCGAAPGAWSQVAIKMVNAAGTDPKSPIGFVLGVDLLHIFPLEGATF 121
Query: 115 FKFDFLDLDSWEFIRQ--AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEM 172
+ Q D++LSDMA G +++DH + +S+C + + +
Sbjct: 122 LCPADVTDSRIRERIQELLPERKADVILSDMAPNATGIKELDHQKLISMCLSLLDLSSSI 181
Query: 173 LNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L GG FL K + GG + + L++ FQ+V +KP ASR ES EM+ LAK ++
Sbjct: 182 LISGGTFLCKLWDGGQKHLLQSRLEQQFQEVRIIKPQASRKESSEMYFLAKFYQ 235
>gi|304314116|ref|YP_003849263.1| 23 S ribosomal RNA methyltransferase [Methanothermobacter
marburgensis str. Marburg]
gi|302587575|gb|ADL57950.1| predicted 23 S ribosomal RNA methyltransferase [Methanothermobacter
marburgensis str. Marburg]
Length = 211
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 1/200 (0%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
+ W D Y + A+ E +R+R++YKLLQ+N ++++++ R++DLG++PG WSQVA
Sbjct: 3 KRWQAERKRDHYYKSAKRENYRSRASYKLLQLNNRYRLIRKGYRVLDLGAAPGGWSQVAL 62
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
G V + + P+ + DF D E I + +GG D+V+SD A
Sbjct: 63 EKVGEEGLVVAVD-LQRIKGFPVENFRAIMGDFTDPAIKERIIEELGGRADVVISDAAPS 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G R IDHLR++ L E A +L G+ L+K FQG + ++ +KK F K+
Sbjct: 122 LSGIRDIDHLRSVDLVENVLDIAYRVLERKGNILIKAFQGPELDKVIKEMKKDFWKLKTT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S EM+++ + F+
Sbjct: 182 KPASSRKASAEMYIVGRDFK 201
>gi|198455401|ref|XP_001359976.2| GA20027 [Drosophila pseudoobscura pseudoobscura]
gi|198133228|gb|EAL29128.2| GA20027 [Drosophila pseudoobscura pseudoobscura]
Length = 316
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR--- 87
++ D + + A+ +GWRARSA+KLLQ E +L R VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIFYRLAKEQGWRARSAFKLLQAEETFHLLDGVTRAVDLCAAPGSWSQVLSKHMY 64
Query: 88 --ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+ +++A+D+ M PI GV + D + E I + G LV+SD A
Sbjct: 65 EPRSPEEREKVKIIAVDLQGMAPIDGVHQLRADITKESTAEAIIEYFEGQKAQLVVSDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
+ G D L +A + +L GG + K ++ T+ + L++ F+ V
Sbjct: 125 PDSTGMHDFDVYMQGELLLSALSISTFILETGGSLVAKIYRADNTSRLYLQLQRFFKDVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR S+E F++A+ F
Sbjct: 185 VFKPSASRNSSIEAFVVARQF 205
>gi|76801271|ref|YP_326279.1| ribosomal RNA methyltransferase [Natronomonas pharaonis DSM 2160]
gi|83305661|sp|Q3IT24|RLME_NATPD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|76557136|emb|CAI48710.1| probable ribosomal RNA methyltransferase [Natronomonas pharaonis
DSM 2160]
Length = 252
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 109/191 (57%), Gaps = 4/191 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y RA+ +G+R+R+AYKL Q++E ++ +VDLG++PG W QVA + G
Sbjct: 3 RKDDYYNRAKQQGYRSRAAYKLKQLDEAADLINEGDTVVDLGAAPGGWLQVANELAGEAG 62
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
VV +D+ ++PI GV+ + D + + E +R G D+V+SDMA G +
Sbjct: 63 T---VVGVDLQRIDPIEGVETVRGDMTEDATREKVRAL-VGEADVVISDMAPNMTGEYSL 118
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH R++ L A AL++L GD + K F+G T+D+ + + F+ V + P ASR
Sbjct: 119 DHARSVHLARMAFETALDLLAPNGDLVAKVFEGPDTDDLRADIDREFEYVRTIHPDASRD 178
Query: 214 ESVEMFLLAKG 224
S E+F++AKG
Sbjct: 179 SSSELFMVAKG 189
>gi|332255476|ref|XP_003276857.1| PREDICTED: LOW QUALITY PROTEIN: putative ribosomal RNA
methyltransferase 1-like [Nomascus leucogenys]
Length = 329
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 2/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++++ Q+ Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDGKX 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+K+ L AA A +L GG F+ K F+G + L+ F V+ KP
Sbjct: 124 QQKVGGQAGAPLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPR 183
Query: 210 ASRAESVEMFLLAKGF 225
+SR S+E F + +G+
Sbjct: 184 SSRNSSIEAFAVCQGY 199
>gi|222478870|ref|YP_002565107.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halorubrum lacusprofundi
ATCC 49239]
gi|254809555|sp|B9LSX2|RLME_HALLT RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|222451772|gb|ACM56037.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halorubrum lacusprofundi
ATCC 49239]
Length = 269
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 70/192 (36%), Positives = 107/192 (55%), Gaps = 2/192 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y +++ +G+RARSAYKL QI+E+ + + +VDLG++PG W QVAA G +
Sbjct: 4 KDEYYNKSKQQGYRARSAYKLKQIDEEANLFERGDTVVDLGAAPGGWLQVAAEEVGESGT 63
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKI 153
V + +D V+ + D + + ++R+AIG D+V+SDMA G +
Sbjct: 64 VVGVD-LQRIDDLDDHDVETIRGDMTEERTRHYLREAIGERGADVVISDMAPNMTGEYAL 122
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH R++ L A A E+L GGDF+VK FQG + ++ F+ + V P ASR
Sbjct: 123 DHARSVHLARQAFDVAEELLAPGGDFVVKVFQGEDLDAFREDVRAEFEYLRTVSPPASRD 182
Query: 214 ESVEMFLLAKGF 225
S E++L+AKG
Sbjct: 183 SSSEVYLVAKGL 194
>gi|45358169|ref|NP_987726.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis S2]
gi|74555203|sp|Q6LZL8|RLME_METMP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|44920926|emb|CAF30162.1| 23 S ribosomal RNA methyltransferase related [Methanococcus
maripaludis S2]
Length = 258
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 1/202 (0%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
+ W+ + ND Y A+ +R+R+ YKL Q+NEK +++ +VDLG +PG W Q
Sbjct: 3 KKDKRWVLQRKNDHYYNLAKRRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQ 62
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM 143
A I G + + + + + K D + + + + PD+++ D
Sbjct: 63 AARDIVGEDGFIVGIDLQTVKPLPH-DNIIAIKGDMTKEEILKQAKDLLPEKPDVIICDA 121
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G +DH+R++ L A A +ML GG+F+VK FQG + L+ ++F K
Sbjct: 122 SPNISGVWDVDHVRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKA 181
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP ASR ES E++++ K F
Sbjct: 182 FTTKPRASRDESAEVYVIGKRF 203
>gi|237840609|ref|XP_002369602.1| ftsJ-like methyltransferase domain-containing protein [Toxoplasma
gondii ME49]
gi|211967266|gb|EEB02462.1| ftsJ-like methyltransferase domain-containing protein [Toxoplasma
gondii ME49]
Length = 981
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 5/198 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-QSNRRIVDLGSSPGSWSQVAARITG 90
+ D + A+ +G+RARSA+KLLQ++++ ++ +S +VDL ++PG W QVAA+
Sbjct: 14 KQRLDKFYHLAKEQGYRARSAFKLLQLSQRFRLFEKSCASVVDLCAAPGGWLQVAAKHCP 73
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIG 149
T +V +D++ + PI GV+ F D +R+ G DLVL D +
Sbjct: 74 VA---TTIVGVDLVPISPIRGVQTFTGDITTPQCAAKLRKLVKFGEVDLVLHDGSPNMGT 130
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L A A ++L G F+ K F+ +L +L+ F++V KP
Sbjct: 131 DWSVDAFSQNVLVLCAAKLACQLLAAGATFVSKVFRSADYAALLYVLQTLFERVDATKPQ 190
Query: 210 ASRAESVEMFLLAKGFRK 227
ASRA S E+F++ +GFRK
Sbjct: 191 ASRAVSAEIFVVCRGFRK 208
>gi|307176560|gb|EFN66047.1| Putative rRNA methyltransferase 3 [Camponotus floridanus]
Length = 844
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y Q A+ G+R+R+A+KL+Q+N K + LQ +R +DL ++PG W QVA +
Sbjct: 7 IGKQRKDKYYQLAKETGYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVARQNM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
+ + V+ +D+ ++PI G D R+ D+VL+D A
Sbjct: 67 PVS---SIVIGVDLFPIKPIPGCISLTEDITTDKCRVAISRELKTWKADVVLNDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+ D + + L +A A + L GG F+ K F+ + ++ +LK+ F+KV KP
Sbjct: 124 KNWLHDAYQQVVLTLSAVKLATQFLRAGGWFVTKVFRSKDYHALIWVLKQLFKKVHATKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ + +
Sbjct: 184 QASRNESAEIFVVCQYY 200
>gi|154309412|ref|XP_001554040.1| hypothetical protein BC1G_07600 [Botryotinia fuckeliana B05.10]
gi|150852424|gb|EDN27616.1| hypothetical protein BC1G_07600 [Botryotinia fuckeliana B05.10]
Length = 807
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA +
Sbjct: 13 DKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAETMPVS--- 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGHRKID 154
+ +V +D+ ++PI V F+ D IR D VL D A D
Sbjct: 70 SLIVGVDLSPIKPIPRVITFQSDITTEKCRATIRTHFKSWKADTVLHDGAPNVGTAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + + F KV KP +SR
Sbjct: 130 SFNQAELALQSLKLATEFLAPGGTFVTKVFRSKDYNSLLWVFNQLFTKVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ +GF+
Sbjct: 190 SAEIFVVCQGFK 201
>gi|225684454|gb|EEH22738.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides
brasiliensis Pb03]
Length = 826
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA S
Sbjct: 13 DKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPS---Q 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ +V +D+ ++PI V F+ D + D VL D A D
Sbjct: 70 SLIVGVDLAPIKPIPKVITFQSDITTDKCRATIRQHFKSWKADTVLHDGAPNVGVAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFSQAELVLQSLKLATEFLAPGGTFVTKVFRSKDYNPLLWVFKQLFTSVKATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ GF+
Sbjct: 190 SAEIFVVCLGFK 201
>gi|289192039|ref|YP_003457980.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
sp. FS406-22]
gi|288938489|gb|ADC69244.1| ribosomal RNA large subunit methyltransferase J [Methanocaldococcus
sp. FS406-22]
Length = 246
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 68/202 (33%), Positives = 108/202 (53%), Gaps = 4/202 (1%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
+ W+ + D Y + A+ +R+R+++KL+Q+NEK +++ + ++DLG +PG W QVA
Sbjct: 6 KRWILQRKKDFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAR 65
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL---VLSDM 143
I G + + E V K DF +S IR+ I V+SD
Sbjct: 66 EIVGDKGFIIGIDLQPVKPFEY-DNVVAIKGDFTLEESLNKIRELIPNEEKKVDVVISDA 124
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G+ IDH R++ L A A EML G+F+ K F G +D + L+KK+F+KV
Sbjct: 125 SPNISGYWDIDHARSIDLVTTALQIATEMLKERGNFVAKVFYGDMIDDYVNLVKKYFEKV 184
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP ASR ES E++++AK +
Sbjct: 185 YITKPQASRKESAEVYVIAKRY 206
>gi|159904677|ref|YP_001548339.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C6]
gi|226703310|sp|A9A6B9|RLME_METM6 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|159886170|gb|ABX01107.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus
maripaludis C6]
Length = 258
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 62/202 (30%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
+ W+ + ND Y A+ +R+R+ YKL Q+NEK +++ +VDLG +PG W Q
Sbjct: 3 KKDKRWVLQRKNDHYYNLAKKRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQ 62
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM 143
A I G + + + V K D + + R + PD+++ D
Sbjct: 63 AARDIVGDKGFIVGIDLQTVKPLPY-ENVIAIKGDMTKEEILKQARDLLPEKPDVIICDA 121
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G +DH R++ L A A +ML GG+F+VK FQG + L+ ++F K
Sbjct: 122 SPNISGVWDVDHARSLELTTMALMTATKMLKRGGNFVVKVFQGDLFEKYVQLVSEYFDKA 181
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP ASR ES E++++ K F
Sbjct: 182 FTTKPRASRDESAEVYVIGKRF 203
>gi|157169535|ref|XP_001657887.1| ribosomal RNA methyltransferase [Aedes aegypti]
gi|108883667|gb|EAT47892.1| ribosomal RNA methyltransferase [Aedes aegypti]
Length = 852
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + + A+ G+R+R+A+KL+Q+N + LQ ++ +DL ++PG W QVA +
Sbjct: 9 KDRKDKFYKLAKETGYRSRAAFKLIQLNRRFGFLQQSQVCIDLCAAPGGWMQVAKQNMPV 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGH 150
+ + V+ ID+ ++ + G D + + ++ D+VL+D A +
Sbjct: 69 S---SVVIGIDLFPIKNVPGCISLVGDITSDKTKSDLAKELKTWKADVVLNDGAPNVGRN 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D + + L +A A + L GG F+ K F+ N ++ +LK+ F+KV KP A
Sbjct: 126 WLFDAYQQVCLTLSAVKLATQFLRPGGWFVTKVFRSKDYNALIWVLKQLFKKVHATKPSA 185
Query: 211 SRAESVEMFLLAKGFR 226
SR ES E+F++ + +R
Sbjct: 186 SRNESAEIFVVCQHYR 201
>gi|255954021|ref|XP_002567763.1| Pc21g07220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589474|emb|CAP95619.1| Pc21g07220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 838
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ +R +DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYRLAKEKGYRARAAFKLIQLNQKYGFLEKSRVCIDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYP 146
S + ++ +D+ ++PI F+ D IR I D+VL D A
Sbjct: 65 YMPS---QSLIIGVDLSPIKPIPRAITFQSDITTDKCRATIRSHIKHWKADVVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A + L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGSAWVQDAFSQAELVLESLRLATDFLGEGGTFVTKVFRSKDYNPLLWVFKQLFNSVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +G++
Sbjct: 182 KPPSSRNVSAEIFVVCRGYK 201
>gi|221503392|gb|EEE29090.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii VEG]
Length = 981
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 5/198 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR-RIVDLGSSPGSWSQVAARITG 90
+ D + A+ +G+RARSA+KLLQ++++ ++ + + +VDL ++PG W QVAA+
Sbjct: 14 KQRLDKFYHLAKEQGYRARSAFKLLQLSQRFRLFEKSCASVVDLCAAPGGWLQVAAKHCP 73
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIG 149
T +V +D++ + PI GV+ F D +R+ G DLVL D +
Sbjct: 74 VA---TTIVGVDLVPISPIRGVQTFTGDITTPQCAAKLRKLVKFGEVDLVLHDGSPNMGT 130
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L A A ++L G F+ K F+ +L +L+ F++V KP
Sbjct: 131 DWSVDAFSQNVLVLCAAKLACQLLAAGATFVSKVFRSADYAALLYVLQTLFERVDATKPQ 190
Query: 210 ASRAESVEMFLLAKGFRK 227
ASRA S E+F++ +GFRK
Sbjct: 191 ASRAVSAEIFVVCRGFRK 208
>gi|67473519|ref|XP_652522.1| ribosomal RNA methyltransferase [Entamoeba histolytica HM-1:IMSS]
gi|56469380|gb|EAL47134.1| ribosomal RNA methyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 231
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 4/191 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + ++A+ EG+RARSA+KL+ + I +VDL ++PGSWSQV ++ N
Sbjct: 6 DKFHRQAKQEGYRARSAFKLIDVERDFHIFDGVHNVVDLCAAPGSWSQVLSKTIKEPKN- 64
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGHRKID 154
+V++D+ D+ PI GV K D + + + G DL++ D A G ID
Sbjct: 65 --IVSVDLQDIAPIEGVTLVKGDITKGSTAKEVMSHFTDGKADLIICDGAPDVTGIHDID 122
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L +AA +L GG F+ K F + K F+ V KP +SR+
Sbjct: 123 EANQWILMQAAFSIMAVVLKQGGSFVAKIFVENEYPHLYFQFKSVFESVTIYKPESSRSS 182
Query: 215 SVEMFLLAKGF 225
S E F++ KGF
Sbjct: 183 SYEHFVVCKGF 193
>gi|119478916|ref|XP_001259487.1| rRNA methyltransferase Spb1, putative [Neosartorya fischeri NRRL
181]
gi|119407641|gb|EAW17590.1| rRNA methyltransferase Spb1, putative [Neosartorya fischeri NRRL
181]
Length = 794
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+ + ++ +D+ ++PI V F+ D IRQ D VL D A
Sbjct: 65 CMPT---QSIIIGVDLAPIKPIPRVITFQSDITTEKCRATIRQHLKHWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGTAWVQDAFSQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFTSVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|261191079|ref|XP_002621948.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
dermatitidis SLH14081]
gi|239590992|gb|EEQ73573.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
dermatitidis SLH14081]
Length = 829
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ +R ++DL ++PGSW QVAA S
Sbjct: 13 DKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSRVVIDLCAAPGSWCQVAAECMPS---Q 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+ ++PI V F+ D IRQ D VL D A D
Sbjct: 70 SLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKTWKADTVLHDGAPNVGVAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFNNVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ +GF+
Sbjct: 190 SAEIFVVCQGFK 201
>gi|303314341|ref|XP_003067179.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106847|gb|EER25034.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 816
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+ + +V +D+ ++PI V F+ D IRQ D VL D A
Sbjct: 65 CMPTE---SLIVGVDLAPIKPIPRVITFQSDITTDKCRATIRQHLKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGTAWVQDAFSQAELALQSLKLATEFLVAGGTFVTKVFRSKDYNSLLWVFKQLFTSVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|150864104|ref|XP_001382804.2| Mitochondrial rRNA Methyltransferase [Scheffersomyces stipitis CBS
6054]
gi|149385360|gb|ABN64775.2| Mitochondrial rRNA Methyltransferase [Scheffersomyces stipitis CBS
6054]
Length = 263
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 25/233 (10%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-QSNRRIVDLGSSP 78
R SS WLNR +NDP+ ++++ + +R+R+AYKL++I++K+ + + I+DLG +P
Sbjct: 22 RYKSKSSTRWLNRQVNDPHTKQSKSDHYRSRAAYKLIEIDQKYSVFNRKTENILDLGFAP 81
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL 138
G+W+QVA + ++ +D++ G F + + L + + IR
Sbjct: 82 GAWTQVAVERMKKLGVKSSILGVDLILSTAPKGSHFIQGNILSKKTHDDIRDFFTRKQSE 141
Query: 139 ------------------------VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN 174
VLSDM T G + DH +M LC+ A A E+L
Sbjct: 142 IVKESEGSEIEIIDQKRKMLTVDLVLSDMMSNTSGIKDNDHYASMDLCDGAIILACEVLK 201
Query: 175 IGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
GG ++K + G + ++ F+KV KP A R ES EM+++ G ++
Sbjct: 202 EGGSLVMKFYTGKEDQVLQERMRLLFEKVYRFKPQACRNESREMYIIGVGKKR 254
>gi|21430814|gb|AAM51085.1| SD16956p [Drosophila melanogaster]
Length = 324
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D + + A+ +GWRARSA+KLLQ +E Q+L+ R VDL ++PGSWSQV A+
Sbjct: 5 SKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLY 64
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+++A+D+ M PI GVK + D + E I + GG +V+SD A
Sbjct: 65 EPLPPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
+ G D L +A + +L GG F+ K ++ T+ + LK+ F+ V
Sbjct: 125 PDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKDVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR S+E F++A+ F
Sbjct: 185 VFKPSASRNSSIEAFVVAREF 205
>gi|149723383|ref|XP_001501025.1| PREDICTED: similar to FtsJ homolog 3 [Equus caballus]
Length = 837
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|195157878|ref|XP_002019821.1| GL12002 [Drosophila persimilis]
gi|194116412|gb|EDW38455.1| GL12002 [Drosophila persimilis]
Length = 316
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR--- 87
++ D + + A+ +GWRARSA+KLLQ E +L R VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIFYRLAKEQGWRARSAFKLLQAEETFHLLDGVTRAVDLCAAPGSWSQVLSKHMY 64
Query: 88 --ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+ +++A+D+ M PI GV + D + + I + G LV+SD A
Sbjct: 65 EPRSPEEREKVKIIAVDLQGMAPIDGVHQLRADITKESTAQAIIEYFEGQKAQLVVSDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
+ G D L +A + +L GG + K ++ T+ + L++ F+ V
Sbjct: 125 PDSTGMHDFDVYMQGELLLSALSISTFILETGGSLVAKIYRADNTSRLYLQLQRFFKDVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR S+E F++A+ F
Sbjct: 185 VFKPSASRNSSIEAFVVARQF 205
>gi|6319535|ref|NP_009617.1| Trm7p [Saccharomyces cerevisiae S288c]
gi|586500|sp|P38238|TRM7_YEAST RecName: Full=tRNA (uridine-2'-O-)-methyltransferase TRM7
gi|536303|emb|CAA85004.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946453|gb|EDN64675.1| 2'-O-ribose tRNA anticodon loop methyltransferase [Saccharomyces
cerevisiae YJM789]
gi|190408775|gb|EDV12040.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Saccharomyces
cerevisiae RM11-1a]
gi|207347732|gb|EDZ73814.1| YBR061Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271915|gb|EEU06940.1| Trm7p [Saccharomyces cerevisiae JAY291]
gi|285810396|tpg|DAA07181.1| TPA: Trm7p [Saccharomyces cerevisiae S288c]
gi|290878080|emb|CBK39139.1| Trm7p [Saccharomyces cerevisiae EC1118]
gi|323310224|gb|EGA63416.1| Trm7p [Saccharomyces cerevisiae FostersO]
gi|323334541|gb|EGA75915.1| Trm7p [Saccharomyces cerevisiae AWRI796]
gi|323338635|gb|EGA79851.1| Trm7p [Saccharomyces cerevisiae Vin13]
gi|323349695|gb|EGA83910.1| Trm7p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356040|gb|EGA87845.1| Trm7p [Saccharomyces cerevisiae VL3]
Length = 310
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ--SNRRIVDLGSSPGSW 81
SS+D D Y ++A+ +G+RARSA+KLLQ+N++ L + +R+VDL ++PGSW
Sbjct: 3 KSSKD-----KRDLYYRKAKEQGYRARSAFKLLQLNDQFHFLDDPNLKRVVDLCAAPGSW 57
Query: 82 SQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
SQV +R S+ + ++V++D+ M PI V + D + I + G
Sbjct: 58 SQVLSRKLFDESPSSDKEDRKIVSVDLQPMSPIPHVTTLQADITHPKTLARILKLFGNEK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D V SD A G +D L +A +L GG F+ K F+G + +
Sbjct: 118 ADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKGGTFVAKIFRGRDIDMLYSQ 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L F K++ KP +SR S+E F++ G+
Sbjct: 178 LGYLFDKIVCAKPRSSRGTSLEAFIVCLGY 207
>gi|24648639|ref|NP_650947.1| CG7009 [Drosophila melanogaster]
gi|9910868|sp|Q9VDD9|RMJ1B_DROME RecName: Full=Putative ribosomal RNA methyltransferase CG7009;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|7300710|gb|AAF55857.1| CG7009 [Drosophila melanogaster]
Length = 320
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D + + A+ +GWRARSA+KLLQ +E Q+L+ R VDL ++PGSWSQV A+
Sbjct: 5 SKDKRDIFYRLAKEQGWRARSAFKLLQADETFQLLEGLTRAVDLCAAPGSWSQVLAKRLY 64
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+++A+D+ M PI GVK + D + E I + GG +V+SD A
Sbjct: 65 EPLPPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
+ G D L +A + +L GG F+ K ++ T+ + LK+ F+ V
Sbjct: 125 PDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADRTSRLYTQLKRFFKNVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR S+E F++A+ F
Sbjct: 185 VFKPSASRNSSIEAFVVAREF 205
>gi|91773171|ref|YP_565863.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcoides
burtonii DSM 6242]
gi|121689250|sp|Q12WR3|RLME_METBU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|91712186|gb|ABE52113.1| ribosomal RNA large subunit methyltransferase [Methanococcoides
burtonii DSM 6242]
Length = 267
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 114/197 (57%), Gaps = 6/197 (3%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ R D Y RA+ EG+R+R+AYKL QINEKH++++ + IVDLG++PG W +VA +I+
Sbjct: 1 MARDRRDTYYWRAKDEGYRSRAAYKLFQINEKHEVIKEDDTIVDLGAAPGGWLEVAKKIS 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYPTI 148
G ++V +D+ ++ I GV+ K D ++ + I + + G D+V+ D A
Sbjct: 61 G-----GKIVGVDLRRIKEIEGVETIKGDITSDETIKKIIELVGEGGADVVICDAAPNLS 115
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+ +DH R++ L +A A ++L G F+VK FQG + + +++ F P
Sbjct: 116 GNWSLDHARSIDLTTSALECAKKILKPKGHFIVKVFQGDMFKEYMDKVRESFTYTRAFSP 175
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E++++ K
Sbjct: 176 KASRPESAEIYVIGKKL 192
>gi|95007320|emb|CAJ20540.1| methyltransferase, putative [Toxoplasma gondii RH]
gi|221482814|gb|EEE21145.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii GT1]
Length = 981
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 5/198 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR-RIVDLGSSPGSWSQVAARITG 90
+ D + A+ +G+RARSA+KLLQ++++ ++ + + +VDL ++PG W QVAA+
Sbjct: 14 KQRLDKFYHLAKEQGYRARSAFKLLQLSQRFRLFEKSCASVVDLCAAPGGWLQVAAKHCP 73
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIG 149
T +V +D++ + PI GV+ F D +R+ G DLVL D +
Sbjct: 74 V---ATTIVGVDLVPIAPIRGVQTFTGDITTPQCAAKLRKLVKFGEVDLVLHDGSPNMGT 130
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L A A ++L G F+ K F+ +L +L+ F++V KP
Sbjct: 131 DWSVDAFSQNVLVLCAAKLACQLLAAGATFVSKVFRSADYAALLYVLQTLFERVDATKPQ 190
Query: 210 ASRAESVEMFLLAKGFRK 227
ASRA S E+F++ +GFRK
Sbjct: 191 ASRAVSAEIFVVCRGFRK 208
>gi|156089279|ref|XP_001612046.1| ribosomal RNA large subunit methyltransferase J family protein
[Babesia bovis]
gi|154799300|gb|EDO08478.1| ribosomal RNA large subunit methyltransferase J family protein
[Babesia bovis]
Length = 959
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
+S ++ D Y A+ +G+RARSA+K++Q+ +K I ++ +VDL ++P
Sbjct: 1 MKSRTKHGKE-----RQDKYYYLAKEQGYRARSAFKIIQLAKKFNIFENCNVLVDLCAAP 55
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPD 137
G W QVA++ + + ++ +D++ + PI GV + D I Q + G D
Sbjct: 56 GGWLQVASKHLPVS---SIIIGVDLVPIRPIKGVVTIQADIRTQRCRNLINQQLRGAEVD 112
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
+VL D A + +D L A A +L GG F+ K F+ N ++ L
Sbjct: 113 VVLHDGAPNVGANWNLDAFNQNVLVIEAAKLASNVLRKGGIFVTKIFRSADYNSLIWTLG 172
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F +V KP +SR S E+F + GFR
Sbjct: 173 KCFDRVKVTKPSSSRNVSAEIFAVCIGFR 201
>gi|315044531|ref|XP_003171641.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma gypseum
CBS 118893]
gi|311343984|gb|EFR03187.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma gypseum
CBS 118893]
Length = 812
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYP 146
S + +V +D+ ++ I V F+ D + D VL D A
Sbjct: 65 CMPS---QSLIVGVDLSPIKAIPKVITFQSDITTDKCRATIRQHFKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGTAWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFTTVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ GF+
Sbjct: 182 KPPSSRNVSAEIFVVCLGFK 201
>gi|56416831|ref|YP_153905.1| cell division protein [Anaplasma marginale str. St. Maries]
gi|222475196|ref|YP_002563612.1| cell division protein (ftsJ) [Anaplasma marginale str. Florida]
gi|254995031|ref|ZP_05277221.1| cell division protein (ftsJ) [Anaplasma marginale str. Mississippi]
gi|255003177|ref|ZP_05278141.1| cell division protein (ftsJ) [Anaplasma marginale str. Puerto Rico]
gi|255004308|ref|ZP_05279109.1| cell division protein (ftsJ) [Anaplasma marginale str. Virginia]
gi|269958781|ref|YP_003328569.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaplasma centrale str.
Israel]
gi|81359063|sp|Q5PAN0|RLME_ANAMM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809546|sp|B9KIP4|RLME_ANAMF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|56388063|gb|AAV86650.1| cell division protein [Anaplasma marginale str. St. Maries]
gi|222419333|gb|ACM49356.1| cell division protein (ftsJ) [Anaplasma marginale str. Florida]
gi|269848611|gb|ACZ49255.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaplasma centrale str.
Israel]
Length = 201
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 41 RAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
A+ G+R+RSAYKL+ I+ K ++LQ R ++DLGS PG W+QVAA VVA
Sbjct: 2 LAKKHGYRSRSAYKLIDIDCKFKLLQRGRYVLDLGSCPGGWAQVAAERVAEGGK-AHVVA 60
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+D+ ME I V F + D D+VLSDMA + GHR++DH ++
Sbjct: 61 VDMAPMERIPNVDFVQCDVEHSPEL-LRAALQDRKFDVVLSDMAPKSCGHRQVDHANIIN 119
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFL 220
LCE A A+E L GG F+ K QG + L+ +F V + KP +SR+ES E++L
Sbjct: 120 LCEMALDLAVEFLRSGGSFVTKILQGEYEQEFRRSLQYYFASVTYFKPKSSRSESSEIYL 179
Query: 221 LAKGFR 226
+ F+
Sbjct: 180 VGTKFK 185
>gi|327354853|gb|EGE83710.1| hypothetical protein BDDG_06655 [Ajellomyces dermatitidis ATCC
18188]
Length = 829
Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA S
Sbjct: 13 DKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVIDLCAAPGSWCQVAAECMPS---Q 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+ ++PI V F+ D IRQ D VL D A D
Sbjct: 70 SLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKTWKADTVLHDGAPNVGVAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFNNVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ +GF+
Sbjct: 190 SAEIFVVCQGFK 201
>gi|170574558|ref|XP_001892866.1| rRNA methyltransferase [Brugia malayi]
gi|158601360|gb|EDP38288.1| rRNA methyltransferase, putative [Brugia malayi]
Length = 789
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y A+ G+R+R+A+KLLQ+N++ + LQ +R +VDL ++PG W QVA +
Sbjct: 7 IGKQRRDKYYHLAKEAGYRSRAAFKLLQLNKRFEFLQKSRAVVDLCAAPGGWLQVAIQNM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-IRQAIGGNPDLVLSDMAYPTI 148
++ V + ++PI + D + + ++ G D VL D A
Sbjct: 67 PVSSICIGVDLV---PIKPINKCVTLQGDITTEKTRQMVRKELHGWEADCVLHDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+ D + L +A A ++L G F+ K F+ ++ + +K F++V KP
Sbjct: 124 RNWVQDAFQQNCLTLSALRLATQILTKNGIFVTKIFRSSDYCHLISVFEKLFKQVHVWKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ + +
Sbjct: 184 AASRLESAEIFVVCEKY 200
>gi|321251839|ref|XP_003192196.1| RNA methyltransferase [Cryptococcus gattii WM276]
gi|317458664|gb|ADV20409.1| RNA methyltransferase, putative [Cryptococcus gattii WM276]
Length = 907
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RARSA+KL+ +N K+ +L R +DL ++PG W QVA +
Sbjct: 14 DKFYRLAKEQGYRARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEKYMPKG--- 70
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+ ++P+ V F D + + DLVL D A D
Sbjct: 71 SLIIGVDLNAIKPLPHVTTFVSDITTPHCRQTLRQHMHDWKADLVLHDGAPNVGSAWVQD 130
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + + F+ V KP +SR
Sbjct: 131 AFTQNELVLQSLKLATEFLAKGGSFVTKVFRSQDYNSLLWVFGQLFKSVEATKPPSSRNV 190
Query: 215 SVEMFLLAKGF 225
S E+F++ + F
Sbjct: 191 SAEIFVVCRDF 201
>gi|320037455|gb|EFW19392.1| rRNA methyltransferase Spb1 [Coccidioides posadasii str. Silveira]
Length = 712
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+ + +V +D+ ++PI V F+ D IRQ D VL D A
Sbjct: 65 CMPTE---SLIVGVDLAPIKPIPRVITFQSDITTDKCRATIRQHLKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGTAWVQDAFSQAELALQSLKLATEFLVAGGTFVTKVFRSKDYNSLLWVFKQLFTSVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|317032331|ref|XP_001394644.2| transfer RNA methyltransferase [Aspergillus niger CBS 513.88]
Length = 396
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 36/233 (15%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPDKVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSN--------ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
GSWSQV +R+ + N ++V+ID+ M P+ G+ K D + + +
Sbjct: 58 GSWSQVLSRVLIKDTDMAELKPRKNVKIVSIDLQPMAPLEGITTLKADITHPSTIPLLLR 117
Query: 131 A------------------IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEM 172
A DLV+SD A G +D L +A AL +
Sbjct: 118 ALDPEAYDSSTSSTPSAIRPPHPVDLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGV 177
Query: 173 LNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L GG F+ K F+G + + L+ F+KV KP +SRA S+E F++ +GF
Sbjct: 178 LRPGGKFVAKIFRGRDVDLLYAQLRTVFEKVSVAKPRSSRASSLEAFVVCEGF 230
>gi|289621680|emb|CBI51591.1| unnamed protein product [Sordaria macrospora]
Length = 833
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ +DL ++PGSW QV A
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVALDLCAAPGSWCQVCAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYP 146
+N + ++ +D+ ++PI V F+ D IR D+VL D A
Sbjct: 65 TMPTN---SIIIGVDLAPIKPIPKVITFQSDITTEKCRATIRTHLKTWKADVVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + + F KV
Sbjct: 122 VGTAWVQDSYNQAELALHSLKLATEFLVEGGTFVTKVFRSKDYNSLLWVCNQLFAKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|268571471|ref|XP_002641056.1| Hypothetical protein CBG22467 [Caenorhabditis briggsae]
Length = 827
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 113/216 (52%), Gaps = 15/216 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +KVK + + D Y + A+ G+R+R+A+KL+Q+N++ + L+ +R V
Sbjct: 1 MGKKVK-----------IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATV 49
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QA 131
DL ++PG W QVA++ + + +V +D+ ++PI + D ++ I+ +
Sbjct: 50 DLCAAPGGWMQVASQFMPVS---SLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKEL 106
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+ D VL D A + D + L +A A ++L GG F+ K F+ +
Sbjct: 107 KTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSC 166
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ + +K F++V KP ASR ES E+F++ + ++K
Sbjct: 167 LIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQK 202
>gi|159119934|ref|XP_001710185.1| FtsJ-like protein [Giardia lamblia ATCC 50803]
gi|157438303|gb|EDO82511.1| FtsJ-like protein [Giardia lamblia ATCC 50803]
Length = 268
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 5/198 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+++ D Y + A+ EGWRARSAYKLLQ++E++ + + R VDL ++PGSWSQV +
Sbjct: 1 MSKDKRDIYYRLAKDEGWRARSAYKLLQLDEQYDLFRGVTRAVDLCAAPGSWSQVLSHKL 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLVLSDMAYPTI 148
++A ++++D+ M P+ V + D + + I + G LV+ D A
Sbjct: 61 PADA---IIISVDLAPMAPLPRVTQIQGDITRKEVADKIIELCHGEMCQLVVCDGAPDVT 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL-LKKHFQKVIHVK 207
G +D L + A A ++L GG F+ K F+G +L F+ V K
Sbjct: 118 GVHDLDEYVQAGLVDHAMTLARQILAPGGTFVSKVFRGECLESLLRRNALSFFKTVDISK 177
Query: 208 PVASRAESVEMFLLAKGF 225
P ASRA S+E F++ +
Sbjct: 178 PDASRASSMECFMVCADY 195
>gi|326481598|gb|EGE05608.1| rRNA methyltransferase Spb1 [Trichophyton equinum CBS 127.97]
Length = 791
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA S
Sbjct: 13 DKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPS---Q 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ +V +D+ ++PI V F+ D + D VL D A D
Sbjct: 70 SLIVGVDLSPIKPIPKVITFQSDITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFSQAELVLQSLKLATEFLVPGGSFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ GF+
Sbjct: 190 SAEIFVVCLGFK 201
>gi|296809876|ref|XP_002845276.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma otae CBS
113480]
gi|238842664|gb|EEQ32326.1| AdoMet-dependent rRNA methyltransferase spb1 [Arthroderma otae CBS
113480]
Length = 804
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA S
Sbjct: 13 DKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPS---Q 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ +V +D+ ++ I V F+ D + D VL D A D
Sbjct: 70 SLIVGVDLSPIKAIPKVITFQSDITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFSQAELVLQSLKLATEFLIPGGTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ GF+
Sbjct: 190 SAEIFVVCLGFK 201
>gi|309355312|emb|CAP39049.2| hypothetical protein CBG_22467 [Caenorhabditis briggsae AF16]
Length = 856
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 113/216 (52%), Gaps = 15/216 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +KVK + + D Y + A+ G+R+R+A+KL+Q+N++ + L+ +R V
Sbjct: 1 MGKKVK-----------IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATV 49
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QA 131
DL ++PG W QVA++ + + +V +D+ ++PI + D ++ I+ +
Sbjct: 50 DLCAAPGGWMQVASQFMPVS---SLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKEL 106
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+ D VL D A + D + L +A A ++L GG F+ K F+ +
Sbjct: 107 KTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSC 166
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ + +K F++V KP ASR ES E+F++ + ++K
Sbjct: 167 LIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQK 202
>gi|323306102|gb|EGA59836.1| Trm7p [Saccharomyces cerevisiae FostersB]
Length = 233
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ--SNRRIVDLGSSPGSW 81
SS+D D Y ++A+ +G+RARSA+KLLQ+N++ L + +R+VDL ++PGSW
Sbjct: 3 KSSKD-----KRDLYYRKAKEQGYRARSAFKLLQLNDQFHFLDDPNLKRVVDLCAAPGSW 57
Query: 82 SQVAARIT-----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
SQV +R S+ + ++V++D+ M PI V + D + I + G
Sbjct: 58 SQVLSRKLFDESPSSDKEDRKIVSVDLQPMSPIPHVTTLQADITHPKTLARILKLFGNEK 117
Query: 137 -DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D V SD A G +D L +A +L GG F+ K F+G + +
Sbjct: 118 ADFVCSDGAPDVTGLHDLDEYVQQQLIMSALQLTACILKKGGTFVAKIFRGRDIDMLYSQ 177
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L F K++ KP +SR S+E F++ G+
Sbjct: 178 LGYLFDKIVCAKPRSSRGTSLEAFIVCLGY 207
>gi|317154308|ref|YP_004122356.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio
aespoeensis Aspo-2]
gi|316944559|gb|ADU63610.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio
aespoeensis Aspo-2]
Length = 199
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 66/194 (34%), Positives = 99/194 (51%), Gaps = 1/194 (0%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +RA+ E + ARS YKL +++++ + + + ++DLG++PGSW+Q A G
Sbjct: 2 KQYQDKYFKRAKKENYAARSVYKLKEMDKRFGLFKKGQTVLDLGAAPGSWTQYAGERVGP 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ V D V F + D DLV+SDMA T G +
Sbjct: 62 EGHVLAVDIQDTKHTFA-ANVTFLQADVFSDSPELLAAMEPLAPFDLVISDMAPKTTGIK 120
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D ++ LCE A A + L GG F VK F+ G T L+ HF+K+ H KP +S
Sbjct: 121 FADQANSLELCERAFEVAAKRLKRGGHFAVKIFESGETKAYTDSLRPHFEKIKHFKPYSS 180
Query: 212 RAESVEMFLLAKGF 225
R+ES E+F++A GF
Sbjct: 181 RSESKEIFIVALGF 194
>gi|115949002|ref|XP_001176916.1| PREDICTED: similar to MGC140597 protein, partial
[Strongylocentrotus purpuratus]
Length = 443
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y A+ G+R+RSA+KL+Q+N K LQ +R +DL ++PG W+
Sbjct: 7 IGKQRKDRYYHLAKETGYRSRSAFKLIQLNRKFSFLQESRVCIDLCAAPGGWN------- 59
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
++ ++ +D+ ++PI V F D + ++ D VL D A
Sbjct: 60 --MPISSMIIGVDLFPIKPIPNVVSFTCDITTTKCRMQLRKEMKTWKADCVLHDGAPNVG 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+D L A A+E LN GG F+ K F+ +L + + F+KV KP
Sbjct: 118 TSWVLDAFTQAQLTLHALKLAVEFLNKGGWFITKVFRSKDYQPLLWVFHQMFRKVHVTKP 177
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ +GF
Sbjct: 178 QASRNESAEIFVVCQGF 194
>gi|283853680|ref|ZP_06370911.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio sp.
FW1012B]
gi|283570921|gb|EFC18950.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio sp.
FW1012B]
Length = 201
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 73/191 (38%), Positives = 102/191 (53%), Gaps = 1/191 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y +A+LE + ARS YKL +I ++ ++L +++DLG+ PGSW+ A+ G
Sbjct: 5 RDHYFNKAKLENYPARSVYKLQEIEKQSRLLVPGAKVLDLGACPGSWTLFTAKRIGPQGR 64
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ ++ E V + D LD A G D+V+SDMA T G + D
Sbjct: 65 VLAID-LNPAGTEFPDNVTYLLGDMLDPGPDILEAFAAFGPFDVVISDMAPQTTGIKFTD 123
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ LCEAA A E L GG F+VK FQG L L++ FQKV KP +SRAE
Sbjct: 124 QCRSLELCEAALSVARERLRPGGGFVVKIFQGPDAPAYLKGLREFFQKVRVAKPQSSRAE 183
Query: 215 SVEMFLLAKGF 225
S E+F +A GF
Sbjct: 184 SKEIFYVATGF 194
>gi|39946040|ref|XP_362557.1| hypothetical protein MGG_08140 [Magnaporthe oryzae 70-15]
gi|73621941|sp|Q52C47|SPB1_MAGO7 RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|145019391|gb|EDK03619.1| hypothetical protein MGG_08140 [Magnaporthe oryzae 70-15]
Length = 884
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+ + + +V +D+ ++PI V F+ D IRQ D VL D A
Sbjct: 65 VMPVS---SLIVGVDLAPIKPIPKVITFQSDITTEKCRATIRQHLKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L A A E L GG F+ K F+ N +L + + F+KV
Sbjct: 122 VGTAWVQDSFNQAELTLQAMKLATEFLVEGGTFVTKVFRSKDYNSMLWVFNQLFKKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|301778303|ref|XP_002924561.1| PREDICTED: putative rRNA methyltransferase 3-like [Ailuropoda
melanoleuca]
gi|281351660|gb|EFB27244.1| hypothetical protein PANDA_013937 [Ailuropoda melanoleuca]
Length = 831
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|302416843|ref|XP_003006253.1| AdoMet-dependent rRNA methyltransferase SPB1 [Verticillium
albo-atrum VaMs.102]
gi|261355669|gb|EEY18097.1| AdoMet-dependent rRNA methyltransferase SPB1 [Verticillium
albo-atrum VaMs.102]
Length = 718
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLIDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYP 146
N + +V +D+ ++ I F+ D + D VL D A
Sbjct: 65 TMPVN---SLIVGVDLAPIKAIPKCITFQSDITTDKCRATLRQHLKTWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + + F KV
Sbjct: 122 VGTAWNQDSFNQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNPLLWVFNQLFTKVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +G++
Sbjct: 182 KPPSSRNVSAEIFVVCRGYK 201
>gi|291406359|ref|XP_002719522.1| PREDICTED: FtsJ homolog 3 [Oryctolagus cuniculus]
Length = 836
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGYFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F++V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRRVQATKPQASRHESAEIFVVCQGF 200
>gi|242280349|ref|YP_002992478.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio salexigens
DSM 2638]
gi|259494562|sp|C6C068|RLME_DESAD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|242123243|gb|ACS80939.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio salexigens
DSM 2638]
Length = 199
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 1/195 (0%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +RA+ E + ARS YKL +++++ ++ + ++DLG++PGSW+ AA+ G
Sbjct: 2 KQYRDHYFKRAKKENYPARSVYKLQELDKRFKVFAKGQNVMDLGAAPGSWTLFAAKKVGD 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
V I D F + D + DL++SDMA T G +
Sbjct: 62 TGRVLAVD-IQSTDTAFPDNATFLQADVFEDSPELLAAMDKQLPYDLIISDMAPKTTGVK 120
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D ++ LCE A L GG F+VK F G + + L+K F KV KP +
Sbjct: 121 FADQANSLELCERARDIVPSRLKQGGHFIVKIFDGPDVKEYIDSLRKMFSKVKRFKPKSC 180
Query: 212 RAESVEMFLLAKGFR 226
R ES E F++ GFR
Sbjct: 181 REESKEFFIVGLGFR 195
>gi|148702027|gb|EDL33974.1| Ftsj homolog 1 (E. coli), isoform CRA_c [Mus musculus]
Length = 310
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 14/195 (7%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ + +R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
+ +VVA+D+ M P+ GV + D L + + I Q G P ++ P
Sbjct: 65 -GQGSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPDGKC 123
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
AA A +L +GG F+ K F+G + L+ F V+ KP +
Sbjct: 124 -------------AALNIATHVLKLGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKS 170
Query: 211 SRAESVEMFLLAKGF 225
SR S+E F + +G+
Sbjct: 171 SRNSSIEAFAVCQGY 185
>gi|167527299|ref|XP_001747982.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773731|gb|EDQ87369.1| predicted protein [Monosiga brevicollis MX1]
Length = 1021
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 15/214 (7%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +KVK D + A+ G RARSA+KL+Q+N K LQ ++ +
Sbjct: 89 MGKKVKTGK-----------DRRDKFYHLAKETGLRARSAFKLVQLNRKFNFLQQSKVCI 137
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQA 131
DL ++PG W QVAA+ + + ++ +D++ ++PI G D + ++
Sbjct: 138 DLCAAPGGWMQVAAQNMPPS---SLIIGVDLVPIKPIKGCIGLVADITTERCRQMLRKEM 194
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+VL D A D SL + A E L G F+ K F+ +
Sbjct: 195 KHLKADVVLHDGAPNVGTSWIQDAFTQASLVLKSLKLATEFLVEKGTFVTKVFRSRDYHA 254
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ + K+ F+KV KP +SR S E+F++ +GF
Sbjct: 255 LMWVFKQLFRKVQATKPTSSRNVSAEIFVVCQGF 288
>gi|303249142|ref|ZP_07335382.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio
fructosovorans JJ]
gi|302489467|gb|EFL49414.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio
fructosovorans JJ]
Length = 222
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 71/192 (36%), Positives = 97/192 (50%), Gaps = 1/192 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y ++A+ + + ARS YKL +I ++ +L ++DLG+ PGSW+ AA G
Sbjct: 5 RDHYFKKAKQDNYPARSVYKLEEIEKQSHLLFPGAAVLDLGACPGSWTLFAASRVGEKGR 64
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ + P V + D LD A G D+VLSDMA T G + D
Sbjct: 65 VLSIDLNEAGTAFP-GNVTYLTGDMLDPGPEILAAFARLGPFDVVLSDMAPKTTGVKFAD 123
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ LCEAA A L GG F+VK FQG L+ +F KV KP +SRAE
Sbjct: 124 QARSLELCEAALSVAFTRLKPGGAFVVKIFQGPDAPAFQKGLRDYFDKVRVAKPKSSRAE 183
Query: 215 SVEMFLLAKGFR 226
S E+F +A GFR
Sbjct: 184 SKEIFYVATGFR 195
>gi|71987561|ref|NP_001022635.1| hypothetical protein H06I04.3 [Caenorhabditis elegans]
gi|60543538|gb|AAX22287.1| Hypothetical protein H06I04.3c [Caenorhabditis elegans]
Length = 786
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 113/216 (52%), Gaps = 15/216 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +KVK + + D Y + A+ G+R+R+A+KL+Q+N++ + L+ +R V
Sbjct: 1 MGKKVK-----------IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATV 49
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QA 131
DL ++PG W QVA++ + + +V +D+ ++PI + D ++ I+ +
Sbjct: 50 DLCAAPGGWMQVASQFMPVS---SLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKEL 106
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+ D VL D A + D + L +A A ++L GG F+ K F+ +
Sbjct: 107 KTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSC 166
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ + +K F++V KP ASR ES E+F++ + ++K
Sbjct: 167 LIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQK 202
>gi|195113347|ref|XP_002001229.1| GI10674 [Drosophila mojavensis]
gi|193917823|gb|EDW16690.1| GI10674 [Drosophila mojavensis]
Length = 305
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 10/206 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR--- 87
++ D Y ++A+ EGWRARSA+KL+ IN++ +L + +R VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDVYYRQAKEEGWRARSAFKLMHINDQFGVLDNVQRAVDLCAAPGSWSQVLSRKLY 64
Query: 88 ---ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG----GNPDLVL 140
+T + ++VA+D+ M PI GV + D + + I LV+
Sbjct: 65 DCCLTDDQKSEVKIVAVDLQAMAPIRGVVQLQGDITKQSTAKAIISHFNYGDDKKAQLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G ++D L +A A +L GG F+ K F+G + L F
Sbjct: 125 CDGAPDVTGVHEMDEYMQSQLIISALSIATFVLESGGKFVAKIFKGNANCMLESRLLSFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFR 226
KP +SR S E F++ FR
Sbjct: 185 NNFQIYKPPSSRPSSNEAFVVCCDFR 210
>gi|58263807|ref|XP_569180.1| RNA methyltransferase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108256|ref|XP_777079.1| hypothetical protein CNBB3110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|73621937|sp|Q5KM86|SPB1_CRYNE RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|50259764|gb|EAL22432.1| hypothetical protein CNBB3110 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223830|gb|AAW41873.1| RNA methyltransferase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 908
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RARSA+KL+ +N K+ +L R +DL ++PG W QVA +
Sbjct: 14 DKFYRLAKEQGYRARSAFKLVHLNRKYDLLSKARCCIDLCAAPGGWLQVAEKYMPKG--- 70
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+ ++P+ V F D + + DLVL D A D
Sbjct: 71 SLIIGVDLNAIKPLPHVTTFVADITTPHCRQTLRQHMHDWKADLVLHDGAPNVGSAWVQD 130
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + + F+ V KP +SR
Sbjct: 131 AFTQNELVLQSLKLATEFLAKGGSFVTKVFRSQDYNSLLWVFGQLFKSVEATKPPSSRNV 190
Query: 215 SVEMFLLAKGF 225
S E+F++ + F
Sbjct: 191 SAEIFVVCRDF 201
>gi|326430676|gb|EGD76246.1| FtsJ cell division protein [Salpingoeca sp. ATCC 50818]
Length = 934
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 59/214 (27%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +K K D + A+ G RARSA+KLLQ+N ++ L +
Sbjct: 1 MGKKSKTGKA-----------RRDKFYHLAKESGLRARSAFKLLQLNRQYDFLTGASVCI 49
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQA 131
DL ++PG W QVA N+N T V+ +D++ ++PI G + D + +
Sbjct: 50 DLCAAPGGWMQVAKEAMTKNSNTT-VIGVDLVPIQPIKGCISIQADITTEHCRAQLRKNM 108
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+VL D A D L + A + L GG F+ K F+
Sbjct: 109 NHRKADVVLHDGAPNVGTSWIQDAFTQAELVLQSLKLATQFLRKGGTFVTKVFRSRDYPK 168
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+L + K F+KV KP +SR S E+F++ + +
Sbjct: 169 LLYVFGKLFEKVHATKPSSSRNVSAEIFVVCQRY 202
>gi|71891885|ref|YP_277615.1| ribosomal RNA large subunit (23S) methyltransferase J [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|83305654|sp|Q493U3|RLME_BLOPB RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|71795991|gb|AAZ40742.1| Ribosomal RNA large subunit (23S) methyltransferase J [Candidatus
Blochmannia pennsylvanicus str. BPEN]
Length = 208
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 4/209 (1%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
N S WL +H D YV+ AQ + R+RS +KL IN + + ++DLGS+P
Sbjct: 3 NSKYSMCSSGWLQKHFKDQYVKAAQRQKLRSRSWFKLDAINRIDALFSTGMTVIDLGSAP 62
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPD 137
G W+ G R+VA DIL M I GV F K D + + + + +
Sbjct: 63 GGWALYVKSKIG---KTGRIVACDILSMRNISGVNFLKGDCSNPNISKILYKWVGQKQVN 119
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
+VLSDMA T G ID R++ L A +L G FLVK FQG + LC +
Sbjct: 120 VVLSDMAPNTTGISIIDVSRSIHLGNLALNICRNVLMHRGAFLVKVFQGKGLDKYLCDVH 179
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP ASR+ S E++++AK +
Sbjct: 180 SLFNIVRIRKPDASRSHSREVYIVAKERK 208
>gi|320582207|gb|EFW96425.1| rRNA methyltransferase, putative [Pichia angusta DL-1]
Length = 824
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 5/193 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y A+ +G+RARS++K+LQIN+K+ L+ ++ ++DL ++PGSW QVAA++ N
Sbjct: 14 DRYYHLAKEKGYRARSSFKILQINQKYGHFLEKSKVVIDLCAAPGSWCQVAAQLCPVN-- 71
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGHRKI 153
+ +V +DI+ ++PI F+ D D +R D VL D A +
Sbjct: 72 -SLIVGVDIVPIKPIPNCITFQSDITTEDCKSKLRGHLKTWKADTVLHDGAPNVGLNWVQ 130
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
D L A A+E L GG F+ K F+ N+++ + ++ F KV KP ASR
Sbjct: 131 DAYTQSHLTLQALRLAVEHLAAGGTFVTKVFRSRDYNNLVWVFRQLFDKVEATKPPASRN 190
Query: 214 ESVEMFLLAKGFR 226
S E+F++ KGF+
Sbjct: 191 VSAEIFVVCKGFK 203
>gi|284163460|ref|YP_003401739.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Haloterrigena turkmenica
DSM 5511]
gi|284013115|gb|ADB59066.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Haloterrigena turkmenica
DSM 5511]
Length = 261
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 3/194 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y RA+ +G+R+R+AYKL Q+++ ++ + +VDLG++PG W QVAA G
Sbjct: 3 RKDDYYNRAKQQGYRSRAAYKLKQLDDLENVISGHDTVVDLGAAPGGWLQVAAEKVGPQG 62
Query: 94 NNTRVVAI---DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
V D+ D V+ + D + + + + A GG+ D+V+SDMA G
Sbjct: 63 TVIGVDLQRIKDLEDETLNERVETIRGDMTEEKTRDRVTDAAGGSVDVVVSDMAPNMSGE 122
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
+D R++ L A ALE+L GG+F+VK F+G +D+ + FQ V P A
Sbjct: 123 YSLDQARSLYLARQAFETALELLESGGNFVVKVFEGPDVDDLRADIDDEFQYVRATAPKA 182
Query: 211 SRAESVEMFLLAKG 224
SR ES E++L+ KG
Sbjct: 183 SREESSEIYLIGKG 196
>gi|91090288|ref|XP_971422.1| PREDICTED: similar to CG8939 CG8939-PA [Tribolium castaneum]
gi|270013436|gb|EFA09884.1| hypothetical protein TcasGA2_TC012032 [Tribolium castaneum]
Length = 805
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y Q A+ G+R+R+A+KL+Q+N K + LQ +R +DL ++PG W QVA +
Sbjct: 7 IGKQRKDKYYQLAKETGFRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVAKQNM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
+ + ++ ID+ ++PI G D ++ D+VL D A
Sbjct: 67 PVS---SVIIGIDLFPIKPIPGCISLTEDITTEKCRVSLKKELQTWKADVVLHDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+ D + L ++ A E L GG F+ K F+ + ++ +LK+ F+KV KP
Sbjct: 124 KNWLHDAYQQACLTLSSLKLASEFLKKGGWFITKVFRSKDYHSLIWVLKQFFKKVHATKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ + +
Sbjct: 184 QASRNESAEIFVVCQHY 200
>gi|73965375|ref|XP_548033.2| PREDICTED: similar to FtsJ homolog 3 (E. coli) (predicted) [Canis
familiaris]
Length = 834
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F +V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFHRVQATKPQASRHESAEIFVVCQGF 200
>gi|316973066|gb|EFV56698.1| putative ribosomal RNA large subunit methyltransferase J
[Trichinella spiralis]
Length = 633
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 11/203 (5%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y A+ G+R+R+A+KL+ +N+K Q L+ + +VDL ++PG W QVA++
Sbjct: 8 KQRRDKYYNLAKQAGYRSRAAFKLVHLNKKFQFLEKSTCLVDLCAAPGGWLQVASQYMPV 67
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGH 150
+ ++ +D++ ++ + V + D + R+ D VL D + +
Sbjct: 68 SR---LIIGVDLVSIKALHNVITLQNDITTESCLSQIKRELKTWTADCVLHDGSPNVGKN 124
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF-------QKV 203
D + L A A +L GG F+ K F+ ++ ++KK F +KV
Sbjct: 125 WNHDAFQQAQLTLHALRLASAILRPGGWFVTKLFRSKDHPTLVNVMKKLFNKVKLAGKKV 184
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
KP ASR ES E++ + +GF+
Sbjct: 185 HVTKPQASRQESAEIYAVCQGFK 207
>gi|72157695|ref|XP_787153.1| PREDICTED: similar to MGC140597 protein, partial
[Strongylocentrotus purpuratus]
Length = 415
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 10/197 (5%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y A+ G+R+RSA+KL+Q+N K LQ +R +DL ++PG W+
Sbjct: 7 IGKQRKDRYYHLAKETGYRSRSAFKLIQLNRKFSFLQESRVCIDLCAAPGGWN------- 59
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
++ ++ +D+ ++PI V F D + ++ D VL D A
Sbjct: 60 --MPISSMIIGVDLFPIKPIPNVVSFTCDITTTKCRMQLRKEMKTWKADCVLHDGAPNVG 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+D L A A+E LN GG F+ K F+ +L + + F+KV KP
Sbjct: 118 TSWVLDAFTQAQLTLHALKLAVEFLNKGGWFITKVFRSKDYQPLLWVFHQMFRKVHVTKP 177
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ +GF
Sbjct: 178 QASRNESAEIFVVCQGF 194
>gi|47225726|emb|CAG08069.1| unnamed protein product [Tetraodon nigroviridis]
Length = 842
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + A+ G+R+RS++KL+Q+N K Q LQ R +VDL ++PG W QVA++ +
Sbjct: 11 RRDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQVASKFMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ ++ +D++ ++PI V + D + ++ D+VL+D A + +
Sbjct: 70 --SLIIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGANWQ 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D L A A E L GG F+ K F+ ++ + ++ F KV KP ASR
Sbjct: 128 HDAFSQAHLTLMALKLACEFLTKGGTFVTKVFRSKDYQPLIWIFQQFFNKVQSTKPQASR 187
Query: 213 AESVEMFLLAKG 224
ES E+F++ +G
Sbjct: 188 NESAEIFVVCQG 199
>gi|307199137|gb|EFN79847.1| Putative rRNA methyltransferase 3 [Harpegnathos saltator]
Length = 853
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y Q A+ G+R+R+A+KL+Q+N K++ LQ +R +DL ++PG W QVA +
Sbjct: 7 IGKQRKDKYYQLAKETGYRSRAAFKLIQLNRKYEFLQKSRVCIDLCAAPGGWMQVARQNM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
+ + VV +D+ ++PI G D R+ D+VL+D A
Sbjct: 67 PVS---SIVVGVDLFPIKPIPGCINLTEDITTDKCRIAITRELKTWKADVVLNDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+ D + L AA A + L GG F+ K F+ + ++ +LK+ F+KV KP
Sbjct: 124 KNWLHDAYQQAVLTLAAIKLAAQFLRAGGWFVTKIFRSKDYHPLIWVLKQLFKKVHATKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ + +
Sbjct: 184 QASRNESAEIFVVCQYY 200
>gi|270009490|gb|EFA05938.1| hypothetical protein TcasGA2_TC008754 [Tribolium castaneum]
Length = 460
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 71/243 (29%), Positives = 107/243 (44%), Gaps = 47/243 (19%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI-- 88
+R D + ++A+ +GWRARSA+KLLQI+EK IL+ + VDL ++PGSWSQV +R
Sbjct: 5 SRDRRDIFYRKAKEQGWRARSAFKLLQIDEKFNILEGVTKAVDLCAAPGSWSQVLSRRLY 64
Query: 89 --------------------------------------------TGSNANNTRVVAIDIL 104
T + ++VA+D+
Sbjct: 65 LGEKINIKPKCKLFYTENEDYMSEDMVECSTSKIVEPKKEEVTETPQKNKDVKIVAVDLQ 124
Query: 105 DMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCE 163
M P+ GV + D + + E I G+ DLV+ D A G ID L
Sbjct: 125 PMSPLPGVIQLQGDITEYKTAEAIISHFEGDHADLVVCDGAPDVTGLHCIDIYIQAQLLL 184
Query: 164 AATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
A +L GG F+ K F+ + + L F+ VI VKP +SR S+E F++ +
Sbjct: 185 GALHITCNVLKPGGTFVAKIFRAKDCDLLTQQLLMLFEDVITVKPTSSRNSSIEAFVVCR 244
Query: 224 GFR 226
F+
Sbjct: 245 KFK 247
>gi|193690534|ref|XP_001942837.1| PREDICTED: putative rRNA methyltransferase 3-like [Acyrthosiphon
pisum]
Length = 834
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 6/203 (2%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
S+ + + D + A+ G+R+R+A+KLLQ+N K + LQ R ++DL ++PG W Q
Sbjct: 3 KKSK--IGKQRKDKFYHLAKETGFRSRAAFKLLQLNRKFEFLQKARVLIDLCAAPGGWMQ 60
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSD 142
VA + + + VV +D+ ++P+ G D ++ D+VL+D
Sbjct: 61 VAKQNMPVS---SIVVGVDLYPIKPVPGCICLTEDITTPQCQSALNKELQTYKADVVLND 117
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A + D L +A L GG F+ K F+ N ++ + K+ F+K
Sbjct: 118 GAPNVGQNWIYDAYTQSCLTLSALKLCCHNLREGGWFITKVFRSKDYNALMWVFKQLFRK 177
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
V KP ASR+ES E+F++ + +
Sbjct: 178 VHATKPQASRSESAEIFVVCQYY 200
>gi|242763691|ref|XP_002340625.1| rRNA methyltransferase Spb1, putative [Talaromyces stipitatus ATCC
10500]
gi|218723821|gb|EED23238.1| rRNA methyltransferase Spb1, putative [Talaromyces stipitatus ATCC
10500]
Length = 798
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYP 146
+ + +V +D+ ++PI V F+ D +R + D VL D A
Sbjct: 65 CMPAG---SLIVGVDLAPIKPIPRVITFQSDITTDKCRSTLRSHVKHLKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGTAWVQDAFTQAELVLQSMKLATEFLREGGTFVTKVFRSKDYNPLLWVFKQLFTSVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +GF+
Sbjct: 182 KPPSSRNVSAEIFVVCRGFK 201
>gi|167378804|ref|XP_001734938.1| ribosomal RNA methyltransferase [Entamoeba dispar SAW760]
gi|165903298|gb|EDR28886.1| ribosomal RNA methyltransferase, putative [Entamoeba dispar SAW760]
Length = 231
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 4/191 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + ++A+ EG+RARSA+KL+ + I +VDL ++PGSWSQV ++ N
Sbjct: 6 DKFHRQAKQEGYRARSAFKLIDVERDFHIFDGVHNVVDLCAAPGSWSQVLSKTIKEPKN- 64
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGHRKID 154
+V++D+ D+ PI GVK K D + + + G DL++ D A G ID
Sbjct: 65 --IVSVDLQDIAPIEGVKLVKGDITKGSTAKEVMSHFTDGKADLIICDGAPDVTGIHDID 122
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L +AA +L GG F+ K F + K F+ V KP +SR+
Sbjct: 123 EANQWILMQAAFSIMAVVLKQGGSFVAKIFVENEYPHLYFQFKSVFESVTIYKPESSRSS 182
Query: 215 SVEMFLLAKGF 225
S E F++ KGF
Sbjct: 183 SYEHFVVCKGF 193
>gi|328771243|gb|EGF81283.1| hypothetical protein BATDEDRAFT_10491 [Batrachochytrium
dendrobatidis JAM81]
Length = 283
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KLLQI+E++ I + + +VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDIYYRLAKEQGWRARSAFKLLQIDEEYNIFEDVKNVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNA--NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
V +R S +++VA+D+ M P+ GV + D + E I G DLV+
Sbjct: 58 VLSRRLASTDSTKQSKIVAVDLQAMAPLPGVIQIQGDITKKSTAELITSHFDGEKADLVI 117
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L GG F+ K F+G + + ++ F
Sbjct: 118 CDGAPDVTGLHDMDEYIQAQLLLAAFNITSHVLRNGGTFIAKIFRGKDISLLFAQMRLFF 177
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
V KP R F++ + +
Sbjct: 178 PLVDVAKP---RKS----FIVCRNY 195
>gi|331214017|ref|XP_003319690.1| 23S rRNA methylase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309298680|gb|EFP75271.1| 23S rRNA methylase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 299
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 9/204 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS----NRRIVDLGSSPGSWSQVAA 86
++ D Y + + EG+RARSAYKL+ ++E + + R++DL ++PGSWSQV
Sbjct: 5 SKDKRDIYYRLGKSEGYRARSAYKLIHLDELYGLFNHPSQAVDRVIDLCAAPGSWSQVLV 64
Query: 87 RITGS----NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
+ ++VA+D+ M PI GV D L++ I G DLV+
Sbjct: 65 KKLNETRSAEEEPAKIVAVDLQPMAPIDGVVQIVGDITKLETATSILSHFEGQKADLVVC 124
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA L +L GG F+ K F+G N I L F
Sbjct: 125 DGAPDVTGLHDLDEFVQSQLLLAALNITLSVLKPGGTFVAKIFRGRDVNMIYDQLLNFFG 184
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
+V KP +SR+ S+E F++ + +
Sbjct: 185 EVDCAKPRSSRSSSIEAFVVCRNY 208
>gi|154283311|ref|XP_001542451.1| hypothetical protein HCAG_02622 [Ajellomyces capsulatus NAm1]
gi|150410631|gb|EDN06019.1| hypothetical protein HCAG_02622 [Ajellomyces capsulatus NAm1]
Length = 620
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA S
Sbjct: 13 DKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVIDLCAAPGSWCQVAAECMPS---Q 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+ ++PI V F+ D IRQ D VL D A D
Sbjct: 70 SLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLKSWKADTVLHDGAPNVGVAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFNTVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ +GF+
Sbjct: 190 SAEIFVVCQGFK 201
>gi|326472373|gb|EGD96382.1| rRNA methyltransferase [Trichophyton tonsurans CBS 112818]
Length = 812
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVA S
Sbjct: 13 DKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVATECMPS---Q 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ +V +D+ ++PI V F+ D + D VL D A D
Sbjct: 70 SLIVGVDLSPIKPIPKVITFQSDITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFSQAELVLQSLKLATEFLVPGGSFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ GF+
Sbjct: 190 SAEIFVVCLGFK 201
>gi|169618599|ref|XP_001802713.1| hypothetical protein SNOG_12491 [Phaeosphaeria nodorum SN15]
gi|160703646|gb|EAT80304.2| hypothetical protein SNOG_12491 [Phaeosphaeria nodorum SN15]
Length = 377
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 75/255 (29%), Positives = 110/255 (43%), Gaps = 58/255 (22%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ EGWRARSAYKLLQ++E+ + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEEGWRARSAYKLLQLDEEFNLFDGVTRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNTR-----------------------------------------VVAID 102
V +R+ R +VAID
Sbjct: 58 VLSRVLIKGEKFGRAGWQEKQAATRNYVLGVKPIEKSLEKLEIKEEAPKPREGVRIVAID 117
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL------------VLSDMAYPTIGH 150
+ M P+ GV + D + + +A+ + V+SD A G
Sbjct: 118 LQPMSPLEGVTTLRADITHPSTIPLMLKALDPDTYDPSATTASSPVDLVISDGAPDVTGL 177
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
+D L AA AL +L GG F+ K F+G + + LK F++V KP +
Sbjct: 178 HDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLLFAQLKIVFERVRVAKPRS 237
Query: 211 SRAESVEMFLLAKGF 225
SRA S+E F++ +GF
Sbjct: 238 SRASSIEAFVVCEGF 252
>gi|240995616|ref|XP_002404632.1| ribosomal RNA methyltransferase, putative [Ixodes scapularis]
gi|215491634|gb|EEC01275.1| ribosomal RNA methyltransferase, putative [Ixodes scapularis]
Length = 817
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D + A+ G+R+R+A+KL+Q+N K + LQ +R ++DL ++PG W QVA +
Sbjct: 7 IGKQRKDKFYHLAKETGYRSRAAFKLIQLNRKFEFLQKSRVLIDLCAAPGGWLQVAQKYM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
+ + +V +D++ + I V + D + ++ D+VL+D A
Sbjct: 67 PVS---SVIVGVDLVPIRAIPNVITIQDDITTGSCRFKLKKELKTWKADIVLNDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
D L A A E L GG F+ K F+ ++ +LKK F+K+ KP
Sbjct: 124 KSWVHDAYGQNVLTLHAVKLATEFLTKGGWFITKVFRSKDYQALMWVLKKLFRKISATKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ + +
Sbjct: 184 QASRHESAEIFVVCQYY 200
>gi|212529376|ref|XP_002144845.1| rRNA methyltransferase Spb1, putative [Penicillium marneffei ATCC
18224]
gi|210074243|gb|EEA28330.1| rRNA methyltransferase Spb1, putative [Penicillium marneffei ATCC
18224]
Length = 794
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA +
Sbjct: 13 DKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPAG--- 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKID 154
+ +V +D+ ++PI V F+ D +R + D VL D A D
Sbjct: 70 SLIVGVDLAPIKPIPRVITFQSDITTDKCRSTLRSHVKHLKADTVLHDGAPNVGTAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFTQAELVLQSMKLATEFLREGGTFVTKVFRSKDYNPLLWVFKQLFTSVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ +GF+
Sbjct: 190 SAEIFVVCRGFK 201
>gi|58865606|ref|NP_001012014.1| putative rRNA methyltransferase 3 [Rattus norvegicus]
gi|73621846|sp|Q5RJT2|RRMJ3_RAT RecName: Full=Putative rRNA methyltransferase 3; AltName:
Full=Protein ftsJ homolog 3; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|55778366|gb|AAH86512.1| FtsJ homolog 3 (E. coli) [Rattus norvegicus]
Length = 829
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG W QVAA+ + + +V +D++ ++P+ V + D + ++
Sbjct: 54 APGGWLQVAAKFMPVS---SLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F +V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFHRVQATKPQASRHESAEIFVVCQGF 200
>gi|195498417|ref|XP_002096514.1| GE25011 [Drosophila yakuba]
gi|194182615|gb|EDW96226.1| GE25011 [Drosophila yakuba]
Length = 318
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 67/201 (33%), Positives = 103/201 (51%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D + + A+ +GWRARSA+KLLQ E Q+L R VDL ++PGSWSQV A+
Sbjct: 5 SKDKRDIFYRLAKEQGWRARSAFKLLQAEETFQLLDGLTRAVDLCAAPGSWSQVLAKRMY 64
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+++A+D+ M I GV + D + E I + GG +V+SD A
Sbjct: 65 DPLPPEERERVKIIAVDLQGMASIEGVTQLRADISKESTAEAIIEFFGGEKAQIVVSDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
+ G D L +A + +L GG F+ K ++ T+ + LK+ F+ V
Sbjct: 125 PDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRADKTSRLYTQLKRFFKDVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR S+E F++A+ F
Sbjct: 185 VFKPSASRNSSIEAFVVAQKF 205
>gi|150400217|ref|YP_001323984.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus vannielii
SB]
gi|189040315|sp|A6USA0|RLME_METVS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|150012920|gb|ABR55372.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanococcus vannielii
SB]
Length = 259
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 1/202 (0%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
+ W+ + DPY A+ + +R+R+ YKL Q+NEK I++ +VDLG +PG W Q
Sbjct: 3 KKDKRWVLQRKKDPYYNLAKRKNYRSRATYKLFQLNEKFNIIKEKNVVVDLGCAPGGWLQ 62
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM 143
A +TG + I + V K D D ++ + I+ + PD+++ D
Sbjct: 63 AARDMTGEEGFIVGIDLQQIKPLPY-ENVIAVKGDMTDEETLKKIQDILPEKPDVIICDA 121
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
+ G +DH R++ L A A +ML GG+F+VK FQG + L+ ++F K
Sbjct: 122 SPNISGVWDVDHTRSLELTTMALMTATKMLKKGGNFVVKVFQGDLFYKYVELVSEYFDKA 181
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP ASR ES E++++AK +
Sbjct: 182 FTTKPRASREESAEVYVIAKHY 203
>gi|317142766|ref|XP_001819081.2| transfer RNA methyltransferase [Aspergillus oryzae RIB40]
Length = 393
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 75/232 (32%), Positives = 113/232 (48%), Gaps = 35/232 (15%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-----SNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + + R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
GSWSQV +R+ +A N ++V+ID+ M P+ G+ K D + + +
Sbjct: 58 GSWSQVLSRVLIKDAAMEELKPRKNVKIVSIDLQPMAPLEGITTLKADITHPSTIPLLLR 117
Query: 131 A-----------------IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML 173
A DLV+SD A G +D L AA AL +L
Sbjct: 118 ALDPEAYDSTTSSPSSLRQPHPVDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLALGVL 177
Query: 174 NIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
GG F+ K F+G + I L+ F+KV KP +SRA S+E F++ +GF
Sbjct: 178 RPGGKFVAKIFRGRDVDLIYAQLRTVFEKVSVAKPRSSRASSLEAFVVCEGF 229
>gi|323698443|ref|ZP_08110355.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio sp. ND132]
gi|323458375|gb|EGB14240.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfovibrio
desulfuricans ND132]
Length = 199
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 102/195 (52%), Gaps = 1/195 (0%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +RA+ E + ARS YKL +++++ QI + + ++DLG++PGSWSQ A G
Sbjct: 2 KQYQDKYFKRAKKENYAARSVYKLKEMDKRFQIFKKGQTVLDLGAAPGSWSQFAGERVGP 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ V + F + D D+++SDMA T G +
Sbjct: 62 EGHVLGVDLQTTKHSFA-GNITFLQADVFSDSPELLAAVEPLAPFDVIISDMAPKTTGIK 120
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D ++ LCE A AL+ L GG F VK F+GG ND ++ +F ++ + KP +S
Sbjct: 121 FADQANSLELCERAFEVALKYLKKGGSFAVKIFEGGEINDYRDAIRPYFARIKNFKPYSS 180
Query: 212 RAESVEMFLLAKGFR 226
R+ES E+F++A GF+
Sbjct: 181 RSESKEIFIVALGFK 195
>gi|194899566|ref|XP_001979330.1| GG14838 [Drosophila erecta]
gi|190651033|gb|EDV48288.1| GG14838 [Drosophila erecta]
Length = 321
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 106/201 (52%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D + + A+ +GWRARSA+KLLQ E Q+L+ R VDL ++PGSWSQV A+
Sbjct: 5 SKDKRDIFYRLAKEQGWRARSAFKLLQAEETFQLLEGLTRAVDLCAAPGSWSQVLAKRMY 64
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+++A+D+ M PI GVK + D + E I + GG +V+SD A
Sbjct: 65 EPLPPEEREKVKIIAVDLQGMAPIEGVKQLRADISKESTAEAIIEFFGGEKAQIVVSDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
+ G D L +A + +L GG F+ K ++ T+ + LK+ F+ V
Sbjct: 125 PDSTGMHDFDSYVQGELLLSALSISTFILEEGGSFVSKIYRSDRTSRLYIQLKRFFKDVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR S+E F++A+ F
Sbjct: 185 VFKPSASRNSSIEAFVVARKF 205
>gi|126308657|ref|XP_001376931.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 839
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+R+RSA+KL+Q+N + Q LQ R ++DL +
Sbjct: 1 MGKKGKVGKSRR-------DKFYHLAKETGFRSRSAFKLIQLNRRFQFLQKARALLDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGN 135
+PG W QVA++ + + +V +D++ ++PI V + D ++
Sbjct: 54 APGGWLQVASKFMPVS---SLIVGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELKTWK 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L A A + L GG F+ K F+ +L +
Sbjct: 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWI 170
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F+ V KP ASR ES E+F++ +GF
Sbjct: 171 FQQLFRHVQATKPQASRQESAEIFVICQGF 200
>gi|83767093|dbj|BAE57233.1| unnamed protein product [Aspergillus oryzae]
Length = 296
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 54/275 (19%)
Query: 7 SSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S S+R L SS+ W R + D + + A +G ++R+A+KL+QI+ K++I +
Sbjct: 11 SRSQRALAFSPFTPKRPSSSKRWQARQLKDHFTREATAQGLKSRAAFKLIQIDAKYRIFR 70
Query: 67 SNRRIVDLGSSPGSWSQV---AARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
+ + +VDLG +PGSWSQV A +T N RV+ +DI+ +P GV + +FLD
Sbjct: 71 NGQTVVDLGYAPGSWSQVRQLAINLTLRTGPNGRVLGVDIIPAQPPKGVFTIQGNFLDPS 130
Query: 124 SWEFIRQAIGGNPDL--------------------------------------------V 139
+++ + V
Sbjct: 131 IQAYVQNFLHNPTRDQQHRPGISPHVSLSHETSEDTKNPIHNCKEMEELCLTGKRTVDVV 190
Query: 140 LSDM-------AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
LSD+ T G DH +M LC AA F+ E+L GG F+ K +QG D+
Sbjct: 191 LSDILSDLCNRMMNTSGMSFRDHAGSMDLCRAALQFSFEVLKAGGHFVCKFYQGAEDKDL 250
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
LK+ FQKV +KP +SR ES E + + ++
Sbjct: 251 EKQLKRLFQKVHRLKPESSRNESKEAYFIGLARKQ 285
>gi|225629924|ref|YP_002726715.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia sp. wRi]
gi|225591905|gb|ACN94924.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia sp. wRi]
Length = 192
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 80/191 (41%), Positives = 119/191 (62%), Gaps = 7/191 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
ND YVQ+ +G+R+RSAYKL++++ K ++ Q ++I+DLG+SPG W QVA++
Sbjct: 2 NDQYVQKTSKDGYRSRSAYKLVEMDNKFKLFQEGQKIIDLGASPGGWLQVASQ------K 55
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
VVA+D+ M I GV+F + D ++ + D++LSDMA + G + +D
Sbjct: 56 GANVVALDVKPMNAINGVEFIQCDIINEFEI-LREKFKDQKFDVILSDMAPESCGLKSLD 114
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
H+R M LCEAA FA L+ GG F+VK FQG + D LKK F+ V + KP +SR+E
Sbjct: 115 HIRIMLLCEAALNFAKHFLSHGGTFVVKIFQGESDKDFCNELKKMFKTVKYFKPKSSRSE 174
Query: 215 SVEMFLLAKGF 225
S EM+L++ GF
Sbjct: 175 STEMYLVSLGF 185
>gi|17553860|ref|NP_497655.1| hypothetical protein H06I04.3 [Caenorhabditis elegans]
gi|7206709|gb|AAF39868.1| Hypothetical protein H06I04.3a [Caenorhabditis elegans]
Length = 833
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 113/216 (52%), Gaps = 15/216 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +KVK + + D Y + A+ G+R+R+A+KL+Q+N++ + L+ +R V
Sbjct: 1 MGKKVK-----------IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATV 49
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QA 131
DL ++PG W QVA++ + + +V +D+ ++PI + D ++ I+ +
Sbjct: 50 DLCAAPGGWMQVASQFMPVS---SLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKEL 106
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+ D VL D A + D + L +A A ++L GG F+ K F+ +
Sbjct: 107 KTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSC 166
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ + +K F++V KP ASR ES E+F++ + ++K
Sbjct: 167 LIRVFEKLFKRVHVWKPAASRLESAEIFVVCEVYQK 202
>gi|253742114|gb|EES98965.1| FtsJ-like protein [Giardia intestinalis ATCC 50581]
Length = 268
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 5/198 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+++ D Y + A+ EGWRARSAYKLLQ++ ++ + R VDL ++PGSWSQV +R
Sbjct: 1 MSKDKRDIYYRLAKDEGWRARSAYKLLQLDAQYDLFSGVTRAVDLCAAPGSWSQVLSRKL 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLVLSDMAYPTI 148
++ ++++D+ M P+ V + D + + I + G LV+ D A
Sbjct: 61 P---DDAIIISVDLAPMAPLPRVIQIQGDITRKEVADKIIELCRGEMCQLVVCDGAPDVT 117
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL-LKKHFQKVIHVK 207
G +D L + A A +L GG F+ K F+G +L F+ V K
Sbjct: 118 GVHDLDEYVQAGLVDHAMTLARRILAPGGTFVSKVFRGECLESLLRRNALSFFKHVDVSK 177
Query: 208 PVASRAESVEMFLLAKGF 225
P ASRA S+E FL+ +
Sbjct: 178 PDASRASSMECFLVCTEY 195
>gi|294654333|ref|XP_456377.2| DEHA2A00902p [Debaryomyces hansenii CBS767]
gi|199428798|emb|CAG84324.2| DEHA2A00902p [Debaryomyces hansenii]
Length = 252
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/227 (30%), Positives = 122/227 (53%), Gaps = 13/227 (5%)
Query: 11 RGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-QSNR 69
R L + K++ SS WLNR D + + ++L+ +R+R+A+KL++I++K+++ + ++
Sbjct: 17 RKLGSRWKSK--SVSSSRWLNRQKKDSHTKESKLQNFRSRAAFKLIEIDDKYRLFNRKSK 74
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
IVDLG +PG+W+QVA T S N ++ +D+++ P G F + + L + I+
Sbjct: 75 NIVDLGFAPGAWTQVAIERTKSLNINANIIGVDLINCSPPEGASFIQGNILSKQTHNNIK 134
Query: 130 QAIGGNPDL----------VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+ N + ++SDM T G + DH +M LC+ A A +LN G
Sbjct: 135 EFFNNNKNHSECEEKPVDLIISDMMANTSGIKDNDHYASMELCDGALILASALLNKNGSM 194
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++K + G + + L+K F KV +KP A R ES EM+ + +
Sbjct: 195 VMKFYTGKEDSLLKEKLQKMFHKVFKMKPSACRDESREMYYIGVRKK 241
>gi|291278455|ref|YP_003495290.1| cell division protein methyltransferase FtsJ [Deferribacter
desulfuricans SSM1]
gi|290753157|dbj|BAI79534.1| cell division protein methyltransferase FtsJ [Deferribacter
desulfuricans SSM1]
Length = 195
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 65/194 (33%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y ++A+ EG+R+R+AYKL +IN K++I++ +++D G +PG WSQ A I G
Sbjct: 4 RKDGYYKKAKHEGFRSRAAYKLSEINNKYRIIKKGDKVLDAGCAPGGWSQAAISIVGDKG 63
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+ +DI +E F K + LD ++ + + D V+SD A T G++
Sbjct: 64 LVVGIDILDISPIEA-KNFYFIKGNLLDKETLKKSAEIC-KEYDTVISDAAPNTTGNKLT 121
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH+ ++ L FA E+L G+FL K F G D + L+ F+KV ++P A+R
Sbjct: 122 DHVNSLELVSTVFNFAKEVLKPEGNFLFKLFDGEDREDFIKQLRTSFKKVKIIRPDATRK 181
Query: 214 ESVEMFLLAKGFRK 227
S E++++ +GF+K
Sbjct: 182 NSFEIYVVCQGFKK 195
>gi|194227880|ref|XP_001493665.2| PREDICTED: similar to Putative ribosomal RNA methyltransferase 1
(rRNA (uridine-2-O-)-methyltransferase) [Equus caballus]
Length = 301
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 69/186 (37%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I + G P DLV+ D A G
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAQEIIRHFEGCPADLVVCDGAPDVTG 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA A +L GG F+ K F+G I L+ F V+ KP
Sbjct: 124 LHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLIYSQLRVFFSSVLCAKPR 183
Query: 210 ASRAES 215
+SR S
Sbjct: 184 SSRNSS 189
>gi|292654359|ref|YP_003534256.1| ribosomal RNA large subunit methyltransferase J [Haloferax volcanii
DS2]
gi|291372926|gb|ADE05153.1| ribosomal RNA large subunit methyltransferase J [Haloferax volcanii
DS2]
Length = 259
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 2/193 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y +A+ EG+RARSAYKL Q++ + +VDLG++PG W QV + G +
Sbjct: 3 RKDHYYNKAKQEGYRARSAYKLKQLDGDAGLFGPGNTVVDLGAAPGGWLQVVSEEVGDHG 62
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-AIGGNPDLVLSDMAYPTIGHRK 152
V + + V+ + D + ++ E + D V+SDMA G
Sbjct: 63 KVVGVD-LQRIRGIDRDNVQTIRGDMTEDETKEELTAVIGERGADAVVSDMAPNMTGEYS 121
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+DH R++ L A A E+L GGDF VK F G D+ +++ FQ V ++P ASR
Sbjct: 122 LDHARSVYLARQAFEVAQELLATGGDFAVKVFDGPDVADLRADMEREFQYVRSMRPDASR 181
Query: 213 AESVEMFLLAKGF 225
S E +L+ K F
Sbjct: 182 DSSSEQYLVGKHF 194
>gi|308474701|ref|XP_003099571.1| hypothetical protein CRE_29065 [Caenorhabditis remanei]
gi|308266583|gb|EFP10536.1| hypothetical protein CRE_29065 [Caenorhabditis remanei]
Length = 784
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 58/211 (27%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +KVK + + D Y + A+ G+R+R+A+KL+Q+N++ + L+ +R V
Sbjct: 1 MGKKVK-----------IGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATV 49
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QA 131
DL ++PG W QVA++ + + +V +D+ ++PI + D ++ I+ +
Sbjct: 50 DLCAAPGGWMQVASQFMPVS---SLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKEL 106
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
+ D VL D A + D + L +A A ++L GG F+ K F+ +
Sbjct: 107 KTWSADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSC 166
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
++ + +K F++V KP ASR ES E+F++
Sbjct: 167 LIRVFEKLFKRVHVWKPAASRLESAEIFVVC 197
>gi|198424890|ref|XP_002122891.1| PREDICTED: similar to Putative rRNA methyltransferase 3 (rRNA
(uridine-2-O-)-methyltransferase 3) [Ciona intestinalis]
Length = 744
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
+ + + D Y A+ G+RARSA+KLLQ+N+K LQS++ VDL ++PG W QVA+
Sbjct: 4 KKQVAKARKDKYYHLAKETGYRARSAFKLLQLNKKFNFLQSSQACVDLCAAPGGWLQVAS 63
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
++ V + I + V F + + R+ D L D A
Sbjct: 64 EHMPMSSIIVGVDLVPIRPVP--KCVTFQDDITKESCRTQLRRELHKWKVDCFLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
+ D L AA A E L GG F+ K F+ ++ + + F KV
Sbjct: 122 VGKNWLHDAYSQSVLTLAALKLASEFLCKGGWFITKVFRSKDYQALMWIFGQLFNKVHAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP ASR S E+F++ +GF+
Sbjct: 182 KPQASRNVSAEIFVVCQGFK 201
>gi|225677266|ref|ZP_03788249.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia endosymbiont of Muscidifurax uniraptor]
gi|225590686|gb|EEH11930.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia endosymbiont of Muscidifurax uniraptor]
Length = 192
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/191 (42%), Positives = 121/191 (63%), Gaps = 7/191 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
ND YVQ+ +G+R+RSAYKL++++ K ++ Q ++I+DLG+SPG WSQVA++
Sbjct: 2 NDQYVQKTSKDGYRSRSAYKLVEMDNKFKLFQEGQKIIDLGASPGGWSQVASQ------K 55
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ VVA+D+ M I GV+F + D ++ + D++LSDMA + G + +D
Sbjct: 56 DANVVALDVKPMNAINGVEFIQCDIINELEI-LREKFKDQKFDVILSDMAPESCGLKSLD 114
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
H+R M LCEAA FA L+ GG F+VK FQG + D LKK F+ V + KP +SR+E
Sbjct: 115 HIRIMLLCEAALNFAKHFLSHGGTFVVKIFQGESDKDFCNELKKMFKTVKYFKPKSSRSE 174
Query: 215 SVEMFLLAKGF 225
S EM+L++ GF
Sbjct: 175 STEMYLVSLGF 185
>gi|170580731|ref|XP_001895384.1| ribosomal RNA methyltransferase [Brugia malayi]
gi|158597684|gb|EDP35763.1| ribosomal RNA methyltransferase, putative [Brugia malayi]
Length = 238
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 8/221 (3%)
Query: 13 LTQKVKNRSCQGSSR-DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRI 71
L + ++ + ++ +L++ +D + ++A+ +RARSAYKLL+INEK++I++ +
Sbjct: 16 LPVRCFSKGKKSTATLKYLHKQWSDEFSKKAREHSYRARSAYKLLEINEKYKIIKPGMVV 75
Query: 72 VDLGSSPGSWSQVAARITGSN-ANNTRVVAIDILDMEPILGVKFFK-FDFLDLDSWEFIR 129
VD+G++PGSW QV A I N +N ++ ID+ + PI GV F D + E I+
Sbjct: 76 VDVGAAPGSWCQVVADIVQPNVYDNALILGIDLQPILPISGVNFLDLSDITAQKTHENIK 135
Query: 130 QAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLC----EAATFFALEMLNIGGDFLVKTF 184
Q + G D+V+SDMA G IDH R +SLC E + ++ L G FL K +
Sbjct: 136 QILNGRSVDVVISDMAPNPTGDGGIDHERILSLCATVLELSVRKSVIPLVKNGTFLCKIW 195
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G + + LK+ F+ V VKP ASR S E++LLA
Sbjct: 196 DGPRREEFIERLKQDFRNVYTVKPKASRDHSAEIYLLAMKK 236
>gi|254573574|ref|XP_002493896.1| AdoMet-dependent methyltransferase involved in rRNA processing and
60S ribosomal subunit maturation [Pichia pastoris GS115]
gi|238033695|emb|CAY71717.1| AdoMet-dependent methyltransferase involved in rRNA processing and
60S ribosomal subunit maturation [Pichia pastoris GS115]
gi|328354283|emb|CCA40680.1| hypothetical protein PP7435_Chr4-0516 [Pichia pastoris CBS 7435]
Length = 828
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 69/212 (32%), Positives = 114/212 (53%), Gaps = 10/212 (4%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLG 75
+ ++ + +S+ L D Y A+ +G+RARS++KLLQINEK+ L+ +R ++DL
Sbjct: 1 MGTKTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKLLQINEKYGHFLEKSRVVIDLC 55
Query: 76 SSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-G 134
++PGSW QVA+++ NA ++ +DI+ ++P+ F+ D D +R +
Sbjct: 56 AAPGSWCQVASQVCPVNA---LIIGVDIVQIKPLPNCLTFQSDITTEDCRSKLRGHMKTW 112
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D VL D A D L A A+E L +GG F+ K F+ N+++
Sbjct: 113 KADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLGVGGTFVTKIFRSKDYNNLMW 172
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ F KV KP ASR S E+F++ KGF+
Sbjct: 173 IFQQLFDKVEATKPPASRNVSAEIFVVCKGFK 204
>gi|260824435|ref|XP_002607173.1| hypothetical protein BRAFLDRAFT_68032 [Branchiostoma floridae]
gi|229292519|gb|EEN63183.1| hypothetical protein BRAFLDRAFT_68032 [Branchiostoma floridae]
Length = 207
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 111/202 (54%), Gaps = 4/202 (1%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ R ++DPYVQ+A ++ +R RSAYKL+++++K + L+ +VD G+ PGSW+QVA
Sbjct: 1 MVRQLSDPYVQKAAVDNFRCRSAYKLIEMDDKFRFLKPGLAVVDCGACPGSWTQVAVNRV 60
Query: 90 GSNANNTR--VVAIDILDMEPILGVKFFKFDFLDLDSWEFI--RQAIGGNPDLVLSDMAY 145
+ R VV +D+ M PI G K L+ + + G D+VLSDMA
Sbjct: 61 NAAEGFPRGMVVGVDLQHMSPIPGAKLLSNCDFTLEETQEHIRKHLPNGKADVVLSDMAP 120
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
G +DH + +SL +A F+ +L G F+ K + G ++ F+ V
Sbjct: 121 NATGLASLDHDQIVSLQLSAFKFSKVVLREDGVFVCKLWDGSHCKKFQSVVGDVFKFVKV 180
Query: 206 VKPVASRAESVEMFLLAKGFRK 227
VKP +SR+ S E+F+ A+G++K
Sbjct: 181 VKPQSSRSNSAELFVFARGYKK 202
>gi|71028686|ref|XP_763986.1| ribosomal RNA methyltransferase [Theileria parva strain Muguga]
gi|68350940|gb|EAN31703.1| ribosomal RNA methyltransferase, putative [Theileria parva]
Length = 247
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/224 (33%), Positives = 124/224 (55%), Gaps = 12/224 (5%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
++ N + SS +W+ R I+D Y+ + ++ +R+RSAYKL+++++K+ I + N+ +V
Sbjct: 2 RGARLVNIASTHSS-EWVRRQISDRYLIQKHIDNYRSRSAYKLIELDDKYFIFRKNQTVV 60
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
+LG PG W+QVA T + A+++RV+ ID ++PI F K + D ++ + +
Sbjct: 61 ELGCYPGGWAQVALERTLTGASSSRVIGIDKTQIDPIPNYDFIKGEINDQETHNKLLTLL 120
Query: 133 GGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
G D+VLSD+A G + DHL + LC AT +++ +GG F+VK F GG +
Sbjct: 121 DGVKADVVLSDLAPNCTGIKMDDHLNSAELCLQATSLMEKVITVGGTFVVKIFMGGQLDR 180
Query: 192 ILCLLKKHFQKVIHVKPV----------ASRAESVEMFLLAKGF 225
L+ F +V KP A R+ES EM+ + K F
Sbjct: 181 YKTYLRSLFSEVRSSKPKLVDFHFTFCRACRSESKEMYFVCKKF 224
>gi|145254616|ref|XP_001398682.1| AdoMet-dependent rRNA methyltransferase spb1 [Aspergillus niger CBS
513.88]
gi|134084264|emb|CAK47295.1| unnamed protein product [Aspergillus niger]
Length = 801
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA +
Sbjct: 13 DKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVVLDLCAAPGSWCQVAAECMPA---Q 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKID 154
+ +V +D+ ++PI V F+ D IRQ D VL D A D
Sbjct: 70 SIIVGVDLAPIKPIPRVITFQSDITTEKCRTTIRQHLKHWKADTVLHDGAPNVGTAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFSQAELVLQSLKLATEFLAEGGTFVTKVFRSKDYNPLLWVFKQLFASVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ + ++
Sbjct: 190 SAEIFVVCRNYK 201
>gi|149236601|ref|XP_001524178.1| AdoMet-dependent rRNA methyltransferase SPB1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452554|gb|EDK46810.1| AdoMet-dependent rRNA methyltransferase SPB1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 799
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK L+ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+++ N + ++ +DI+ ++P+ F+ D D +R + D
Sbjct: 58 GSWCQVASQLCPIN---SLIIGVDIVPIKPLPNCITFQSDITTEDCRSKLRGHMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L GG F+ K F+ N+++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKVFRSRDYNNLMWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+KV KP +SR S E+F++ KGF+
Sbjct: 175 QLFEKVEATKPPSSRNVSAEIFVVCKGFK 203
>gi|85103106|ref|XP_961445.1| AdoMet-dependent rRNA methyltransferase spb1 [Neurospora crassa
OR74A]
gi|73621942|sp|Q9P6V8|SPB1_NEUCR RecName: Full=AdoMet-dependent rRNA methyltransferase spb-1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|16415988|emb|CAB88626.2| conserved hypothetical protein [Neurospora crassa]
gi|28922991|gb|EAA32209.1| AdoMet-dependent rRNA methyltransferase spb1 [Neurospora crassa
OR74A]
Length = 831
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ +DL ++PGSW QV A +N
Sbjct: 13 DKWYKLAKEKGYRARAAFKLIQLNKKYGFLEKSKVALDLCAAPGSWCQVCAETMPTN--- 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+ ++PI V F+ D IR D+VL D A D
Sbjct: 70 SIIIGVDLAPIKPIPKVITFQSDITTEKCRATIRSHLKTWKADVVLHDGAPNVGTAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + + F KV KP +SR
Sbjct: 130 SYNQAELALHSLKLATEFLIEGGTFVTKVFRSKDYNSLLWVCNQLFAKVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ +GF+
Sbjct: 190 SAEIFVVCRGFK 201
>gi|238882966|gb|EEQ46604.1| AdoMet-dependent rRNA methyltransferase SPB1 [Candida albicans
WO-1]
Length = 737
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSPGSWSQVAA 86
+H D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++PGSW QVA+
Sbjct: 8 KKHSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVAS 67
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPDLVLSDMAY 145
++ N + ++ +DI+ ++P+ V F+ D D +R + D VL D A
Sbjct: 68 QLCPIN---SLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKADTVLHDGAP 124
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
D L A A+E L GG F+ K F+ N+++ + ++ F+KV
Sbjct: 125 NVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKIFRSRDYNNLMWVFQQLFEKVEA 184
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP ASR S E+F++ KGF+
Sbjct: 185 TKPPASRNVSAEIFVVCKGFK 205
>gi|297744408|emb|CBI37670.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 7/199 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D + A+ G+R+R+A+KL+Q++ K+ L+S+R ++DL ++PG W Q A
Sbjct: 7 KHRLDKFYHLAKEHGYRSRAAWKLVQLDSKYNFLRSSRAVLDLCAAPGGWMQAAVERVPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW----EFIRQAIGGNPDLVLSDMAYPT 147
+ ++ +D+ + P+ G + D + + + D+VL D +
Sbjct: 67 G---SFILGVDLNPIAPVRGAISIEEDITKPACKARVKKLMSEYGCAAFDIVLHDGSPNI 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + +L A A + L G F+ K F+ N +L LK+ F+KV K
Sbjct: 124 GGAWTQEATAQNALVIDALRLATQFLAPKGAFVTKVFRSQDYNSVLYCLKQLFEKVEVDK 183
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASR+ S E+F+L ++
Sbjct: 184 PAASRSTSAEIFVLGLKYK 202
>gi|194764569|ref|XP_001964401.1| GF23069 [Drosophila ananassae]
gi|190614673|gb|EDV30197.1| GF23069 [Drosophila ananassae]
Length = 405
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D + + A+ +GWRARSA+KLLQ +E +L R VDL ++PGSWSQV A+
Sbjct: 5 SKDKRDIFYRLAKEQGWRARSAFKLLQADETFHLLDGLHRAVDLCAAPGSWSQVLAKHMY 64
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+ +++A+D+ M PI GV + D + E I G +V+ D A
Sbjct: 65 EPLSEEDKKKVKIIAVDMQGMAPIEGVTQMREDISKESTAEAIINFFEGEKAQIVVCDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
+ G D + L A A +L GG F+ K ++ T+ +K+ F+ V
Sbjct: 125 PDSTGMHDFDSYVQIELVITAISIATYILEEGGSFVSKIYRCDKTSKAYTQMKRFFKDVC 184
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP ASR S+E F++ + F
Sbjct: 185 VFKPSASRNSSIEAFVIGRQF 205
>gi|42519983|ref|NP_965898.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia endosymbiont of Drosophila melanogaster]
gi|81652913|sp|Q73IS9|RLME_WOLPM RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|42409720|gb|AAS13832.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia endosymbiont of Drosophila melanogaster]
Length = 192
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 120/191 (62%), Gaps = 7/191 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
ND YVQ+ +G+R+RSAYKL++++ K ++ Q ++I+DLG+SPG WSQVA++
Sbjct: 2 NDQYVQKTSKDGYRSRSAYKLVEMDNKFKLFQEGQKIIDLGASPGGWSQVASQ------K 55
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
VVA+DI M I GV+F + D ++ + D++LSDMA + G + +D
Sbjct: 56 GANVVALDIKPMNAINGVEFIQCDIINEFEI-LREKFKDQKFDVILSDMAPESCGLKSLD 114
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
H+R M LCEAA FA L+ GG F+VK FQG + D LKK F+ V + KP +SR+E
Sbjct: 115 HIRIMLLCEAALNFAKHFLSHGGTFVVKIFQGESDKDFCNELKKMFKTVKYFKPKSSRSE 174
Query: 215 SVEMFLLAKGF 225
S EM+L++ GF
Sbjct: 175 STEMYLVSLGF 185
>gi|110760837|ref|XP_391900.3| PREDICTED: putative rRNA methyltransferase 3-like isoform 2 [Apis
mellifera]
Length = 817
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D + Q A+ G+R+R+A+KL+Q+N K + LQ +R +DL ++PG W QVA +
Sbjct: 7 IGKQRKDKFYQLAKETGYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVARQNM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
+ + V+ +D+ ++PI G D R+ D+VL D A
Sbjct: 67 PVS---SIVIGVDLFPIKPIPGCISLIEDITTDKCRVSITRELKTWKADVVLHDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+ D + + L +A A L GG F+ K F+ + ++ +LK+ F+KV KP
Sbjct: 124 KNWLHDAYQQIVLTLSALKMATHFLRSGGWFITKVFRSKDYHPLIWVLKQLFKKVHATKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ + +
Sbjct: 184 QASRTESAEIFVVCQYY 200
>gi|281211427|gb|EFA85591.1| rRNA methyltransferase [Polysphondylium pallidum PN500]
Length = 830
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
G + L + D + A+ +G+R+R+A+KL+Q+N+K+ L S + +DL ++PG
Sbjct: 9 KRMGQKKKKLAKGRLDKFYYLAKEQGYRSRAAFKLIQLNKKYNFLGSAKACLDLCAAPGG 68
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLV 139
W QVA++ + +V +D+ + PI + D E + D+
Sbjct: 69 WMQVASKYMPV---QSLIVGVDLDPIRPIKNCIGLQEDITTQKCRTEIKKSLKTWKVDIC 125
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
L D A D + L A A E L GG F+ K F+G N +L + +
Sbjct: 126 LHDGAPNMGTSWIQDAYQQAELTLHALKLATEFLVAGGWFVTKVFRGPDYNALLWVFHQL 185
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KV KP ASR S E+F++ +GF
Sbjct: 186 FKKVDSTKPQASRNASAEIFVVCQGF 211
>gi|328784537|ref|XP_003250462.1| PREDICTED: putative rRNA methyltransferase 3-like isoform 1 [Apis
mellifera]
Length = 844
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D + Q A+ G+R+R+A+KL+Q+N K + LQ +R +DL ++PG W QVA +
Sbjct: 7 IGKQRKDKFYQLAKETGYRSRAAFKLIQLNRKFEFLQKSRVCIDLCAAPGGWMQVARQNM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
+ + V+ +D+ ++PI G D R+ D+VL D A
Sbjct: 67 PVS---SIVIGVDLFPIKPIPGCISLIEDITTDKCRVSITRELKTWKADVVLHDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+ D + + L +A A L GG F+ K F+ + ++ +LK+ F+KV KP
Sbjct: 124 KNWLHDAYQQIVLTLSALKMATHFLRSGGWFITKVFRSKDYHPLIWVLKQLFKKVHATKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ + +
Sbjct: 184 QASRTESAEIFVVCQYY 200
>gi|115387475|ref|XP_001211243.1| AdoMet-dependent rRNA methyltransferase spb-1 [Aspergillus terreus
NIH2624]
gi|114195327|gb|EAU37027.1| AdoMet-dependent rRNA methyltransferase spb-1 [Aspergillus terreus
NIH2624]
Length = 806
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA +
Sbjct: 13 DKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPA---Q 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+ ++PI V F+ D IR D VL D A D
Sbjct: 70 SIIIGVDLAPIKPIPRVISFQSDITTEKCRATIRSHLKTWKADTVLHDGAPNVGTAWVQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 130 AFSQAELVLQSMKLATEFLVEGGTFVTKVFRSKDYNALLWVFKQLFTSVEATKPPSSRNV 189
Query: 215 SVEMFLLAKGFR 226
S E+F++ +GF+
Sbjct: 190 SAEIFVVCRGFK 201
>gi|325114247|emb|CBZ49804.1| putative ftsJ-like methyltransferase domain-containing protein
[Neospora caninum Liverpool]
Length = 988
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 15/218 (6%)
Query: 12 GLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-QSNRR 70
G Q+ K + + D + A+ +G+RARSA+KLLQ++++ + ++ R
Sbjct: 3 GGDQRKKKKGKE----------RLDKFYHLAKEQGYRARSAFKLLQLSQRFNLFQKNCSR 52
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
+VDL ++PG W QVAA+ + +V +D++ ++PI GV+ F D +R+
Sbjct: 53 VVDLCAAPGGWLQVAAKHCPVA---STIVGVDLVPIQPIRGVETFTGDITTAACAAKLRK 109
Query: 131 A-IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
G DLVL D + +D L +A A ++L G F+ K F+ G
Sbjct: 110 LVKFGEVDLVLHDGSPNMGTDWSVDAFNQNVLVLSAARLACQLLAAGATFVSKVFRSGDY 169
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+L +L+ F +V KP ASRA S E+F++ +GF+K
Sbjct: 170 AALLYVLQTLFDRVDATKPQASRAVSAEIFVVCRGFKK 207
>gi|159115593|ref|XP_001708019.1| FtsJ cell division protein, putative [Giardia lamblia ATCC 50803]
gi|157436128|gb|EDO80345.1| FtsJ cell division protein, putative [Giardia lamblia ATCC 50803]
Length = 1084
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 4/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
++ D Y + A+ G+R+R+AYKL+Q++ ++ L S + ++DL ++PGSWSQVAA
Sbjct: 10 KNRKDEYYRLAREAGYRSRAAYKLIQLDAQYGFLSSTKCLIDLCAAPGSWSQVAAMKMPV 69
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGH 150
+ +V++D+ ++PI GV F D + G D V+ D A
Sbjct: 70 G---SLIVSVDLDPIKPINGVVSFCSDITTAACRNALTEKLKGWAVDTVIHDGAPNMGTA 126
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
+D +L AA A E L + G F+ K F+ + +L +L++ F+KV KP A
Sbjct: 127 WGVDAFGQNTLVLAACKLATEFLRMHGTFITKIFRSADHDALLYVLRQLFEKVEITKPRA 186
Query: 211 SRAESVEMFLLAKGFR 226
SR S E F + ++
Sbjct: 187 SRDNSSECFAVCLRYK 202
>gi|290998754|ref|XP_002681945.1| rRNA (uridine-2'-O-)-methyltransferase [Naegleria gruberi]
gi|284095571|gb|EFC49201.1| rRNA (uridine-2'-O-)-methyltransferase [Naegleria gruberi]
Length = 823
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
LN D Y A+ +G+R+R+A+KL+Q+N+K+ L + R ++DL ++PG W QVA +
Sbjct: 7 LNNERLDKYYHMAKEQGYRSRAAFKLVQLNKKYDFLGTARVMLDLCAAPGGWLQVAKKFM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTI 148
N+ V ++ I V + D + ++ + G D+VL D A
Sbjct: 67 PVNSTLVGVDLC---PIKAIPHVTTIQGDITTKKTMTMVKNVLRGQKCDVVLHDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+ D LC A A E L G F+ K F+ ++ +L + F KV KP
Sbjct: 124 ANWLKDAFSQSELCLFALKMATEFLKPEGLFITKVFRSKDYTSLMWVLNQFFTKVEATKP 183
Query: 209 VASRAESVEMFLLAKGFR 226
ASR S E+F++ G++
Sbjct: 184 KASRDASAEIFVVCFGYK 201
>gi|99034839|ref|ZP_01314753.1| hypothetical protein Wendoof_01000429 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 192
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 120/191 (62%), Gaps = 7/191 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
ND YVQ+ +G+R+RSAYKL++++ K ++ Q ++I+DLG+SPG WSQVA++
Sbjct: 2 NDQYVQKTSKDGYRSRSAYKLVEMDNKFKLFQEGQKIIDLGASPGGWSQVASQ------K 55
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
VVA+DI M I GV+F + D ++ + D++LSDMA + G + +D
Sbjct: 56 GANVVALDIKPMNAINGVEFIQCDIINEFEI-LREKFKDQKFDVILSDMAPESCGLKSLD 114
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
H+R M LCEAA FA L+ GG F+VK FQG + D LKK F+ V + KP +SR+E
Sbjct: 115 HIRIMLLCEAALNFAKHFLSHGGTFVVKIFQGESDKDFCNELKKMFKTVKYFKPKSSRSE 174
Query: 215 SVEMFLLAKGF 225
S EM+L++ GF
Sbjct: 175 STEMYLVSLGF 185
>gi|254584860|ref|XP_002497998.1| ZYRO0F18304p [Zygosaccharomyces rouxii]
gi|186928984|emb|CAQ43309.1| AdoMet-dependent rRNA methyltransferase SPB1 [Zygosaccharomyces
rouxii]
gi|238940891|emb|CAR29065.1| ZYRO0F18304p [Zygosaccharomyces rouxii]
Length = 839
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 111/209 (53%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK L+ ++ ++DL ++P
Sbjct: 3 KTDKKNSKGRL-----DKYYHLAKEKGYRARSSFKVIQINEKFGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+++ N + ++ +DI+ M P+ V F+ D D +R + D
Sbjct: 58 GSWCQVASKLCPVN---SLILGVDIVPMRPMPNVITFQSDITTEDCRSKLRGYMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L + G F+ K F+ N ++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFSQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLMWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+KV KP ASR S E+F++ +GF+
Sbjct: 175 QLFEKVEATKPPASRNVSAEIFVVCRGFK 203
>gi|294657864|ref|XP_460162.2| DEHA2E19690p [Debaryomyces hansenii CBS767]
gi|218511801|sp|Q6BNQ8|SPB1_DEBHA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|199433005|emb|CAG88435.2| DEHA2E19690p [Debaryomyces hansenii]
Length = 831
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+++ N + ++ +DI+ ++ + F+ D D +R + D
Sbjct: 58 GSWCQVASQLCPIN---SLIIGVDIVPIKALPNCITFQSDITTEDCRSQLRGHMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E LN GG F+ K F+ N+++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFTQSHLTLQALKLAVENLNTGGTFVTKIFRSRDYNNLMWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+KV KP ASR S E+F++ KG++
Sbjct: 175 QLFEKVEATKPPASRNVSAEIFVVCKGYK 203
>gi|50285125|ref|XP_444991.1| hypothetical protein [Candida glabrata CBS 138]
gi|73621936|sp|Q6FX63|SPB1_CANGA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|49524294|emb|CAG57891.1| unnamed protein product [Candida glabrata]
Length = 837
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK L+ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+++ N + ++ +DI+ M+P+ V F+ D D +R + D
Sbjct: 58 GSWCQVASKLCPVN---SLIIGVDIVPMKPMPNVITFQSDITTEDCRSRLRGYMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L + G F+ K F+ N ++ + +
Sbjct: 115 TVLHDGAPNVGLGWAQDAFTQSHLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+KV KP ASR S E+F++ KGF+
Sbjct: 175 QLFEKVEATKPPASRNVSAEIFVVCKGFK 203
>gi|67515621|ref|XP_657696.1| hypothetical protein AN0092.2 [Aspergillus nidulans FGSC A4]
gi|73621939|sp|Q5BH88|SPB1_EMENI RecName: Full=AdoMet-dependent rRNA methyltransferase spb1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|40746114|gb|EAA65270.1| hypothetical protein AN0092.2 [Aspergillus nidulans FGSC A4]
gi|259489716|tpe|CBF90216.1| TPA: AdoMet-dependent rRNA methyltransferase spb1 (EC
2.1.1.-)(2'-O-ribose RNA
methyltransferase)(S-adenosyl-L-methionine-dependent
methyltransferase)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BH88] [Aspergillus
nidulans FGSC A4]
Length = 806
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+H D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++PGSW QVAA
Sbjct: 5 KKHGKGRLDKWYRLAKEKGYRARAAFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAE 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYP 146
+ + +V +D+ ++PI V F+ D IR D VL D A
Sbjct: 65 CMPA---QSLIVGVDLAPIKPIPRVITFQQDITTEKCRATIRSHLKHWKADTVLHDGAPN 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
D L + A E L GG F+ K F+ N +L + K+ F V
Sbjct: 122 VGTAWVQDAFSQAELVLESLKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFMSVEAT 181
Query: 207 KPVASRAESVEMFLLAKGFR 226
KP +SR S E+F++ +G++
Sbjct: 182 KPPSSRNVSAEIFVVCRGYK 201
>gi|242088869|ref|XP_002440267.1| hypothetical protein SORBIDRAFT_09g028780 [Sorghum bicolor]
gi|241945552|gb|EES18697.1| hypothetical protein SORBIDRAFT_09g028780 [Sorghum bicolor]
Length = 819
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + A+ +G+R+R+A+KLLQ++ + + L + R ++DL ++PG W QVA
Sbjct: 7 KQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARSVLDLCAAPGGWVQVAVNHAPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN----PDLVLSDMAYPT 147
A VV +D++ + PI G D +R+ + N D+VL D +
Sbjct: 67 GA---FVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDSNGVSAFDVVLHDGSPNV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + +L A A L G F+ K F+ N I+ LK+ F+KV K
Sbjct: 124 GGAWAQEATSQSALVIDALRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQFFEKVEATK 183
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASR+ S E++++ + ++
Sbjct: 184 PSASRSTSAEIYIICQKYK 202
>gi|115465501|ref|NP_001056350.1| Os05g0567400 [Oryza sativa Japonica Group]
gi|113579901|dbj|BAF18264.1| Os05g0567400 [Oryza sativa Japonica Group]
Length = 819
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 7/199 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + A+ +G+R+R+A+KLLQ++ + + L + R ++DL ++PG W QVA
Sbjct: 7 KQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVAVNHAPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN----PDLVLSDMAYPT 147
A VV +D++ + PI G D +R+ + N D+VL D +
Sbjct: 67 GA---FVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDSNGVAAFDVVLHDGSPNV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + SL A A L G F+ K F+ N I+ LK+ F+KV K
Sbjct: 124 GGAWAQEATAQSSLVIDAVRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQLFEKVEVTK 183
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASR+ S E++++ ++
Sbjct: 184 PTASRSTSAEIYIICLRYK 202
>gi|190571015|ref|YP_001975373.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia endosymbiont of Culex quinquefasciatus Pel]
gi|213019536|ref|ZP_03335342.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia endosymbiont of Culex quinquefasciatus JHB]
gi|190357287|emb|CAQ54715.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia endosymbiont of Culex quinquefasciatus Pel]
gi|212994958|gb|EEB55600.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia endosymbiont of Culex quinquefasciatus JHB]
Length = 192
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 80/191 (41%), Positives = 118/191 (61%), Gaps = 7/191 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
ND YVQ+ +G+R+RSAYKL++I++K ++LQ ++I+DLG+ PG WSQVA++
Sbjct: 2 NDQYVQKTNKDGYRSRSAYKLIEIDDKFKLLQQGQKIIDLGAFPGGWSQVASK------K 55
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V+A+DI + I GV+ + D + + D++LSDMA + G + +D
Sbjct: 56 GASVIAVDIKPINAISGVECIQCDIISELEI-LREKFKDHKFDVILSDMAPESCGLKSLD 114
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
H+R M LCEAA FA LN G F+VK FQG + D LKK F+ V + KP +SR+E
Sbjct: 115 HIRIMLLCEAALNFAKHFLNHDGKFVVKIFQGESDKDFCNELKKMFKTVRYFKPKSSRSE 174
Query: 215 SVEMFLLAKGF 225
S EM+L++ GF
Sbjct: 175 STEMYLVSLGF 185
>gi|209876181|ref|XP_002139533.1| tRNA (uridine-2'-O-)-methyltransferase protein [Cryptosporidium
muris RN66]
gi|209555139|gb|EEA05184.1| tRNA (uridine-2'-O-)-methyltransferase protein, putative
[Cryptosporidium muris RN66]
Length = 264
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 2/186 (1%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN-ANNTRVVA 100
A+ EG+RARSAYKLLQ+++ + I + R VDL ++PGSWSQV ++ N NN +V+
Sbjct: 16 AKQEGYRARSAYKLLQVDQYYPIFKGVNRAVDLCAAPGSWSQVLSQKLNCNENNNALIVS 75
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTM 159
+D+ DM PI GV K D ++ + I GG DLVL D A G ID
Sbjct: 76 VDLQDMAPIEGVNIIKGDITSQNTVDIILDYFGGEKADLVLCDGAPDVTGFHDIDEFIQN 135
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
L +A ++L GG F+ K F+G I + +F+ V KP +SR S+E F
Sbjct: 136 QLLLSALSITTKLLCDGGSFVAKIFRGENIAFIYQQMFYYFEYVDCCKPASSRNSSLEAF 195
Query: 220 LLAKGF 225
++ + F
Sbjct: 196 IVCRNF 201
>gi|324504254|gb|ADY41837.1| RRNA methyltransferase 3 [Ascaris suum]
Length = 800
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + A+ G+R+R+A+KL+Q+N++ + LQ +R ++DL ++PG W QVAA+
Sbjct: 9 KQRKDKFYHLAKEAGYRSRAAFKLIQLNKRFEFLQKSRALIDLCAAPGGWLQVAAQNMPV 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGH 150
++ + + ++PI + D + + I+ + D VL D A +
Sbjct: 69 SSVRIGIDLV---PIKPINSCITLQGDITTEKARQMIKKELQTWEADCVLHDGAPNVGLN 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D + L +A A ++L G F+ K F+ + ++ + +K F+KV KP A
Sbjct: 126 WLHDAFQQNCLTLSALRLATQVLAKNGCFVTKVFRSNDYHSLISVFEKLFKKVHVWKPAA 185
Query: 211 SRAESVEMFLLAKGF 225
SR ES E+F++ + +
Sbjct: 186 SRLESAEIFVVCEKY 200
>gi|11499633|ref|NP_070875.1| cell division protein (ftsJ) [Archaeoglobus fulgidus DSM 4304]
gi|9911012|sp|O28228|RLME_ARCFU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|2648490|gb|AAB89203.1| cell division protein (ftsJ) [Archaeoglobus fulgidus DSM 4304]
Length = 191
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 76/196 (38%), Positives = 112/196 (57%), Gaps = 7/196 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +A+ EG+R+R+AYKLLQ+N ++++ ++DLG++PG WSQVAA +
Sbjct: 2 KDRQDYYYWKAKKEGYRSRAAYKLLQMNRTFKLIREGDLVLDLGATPGGWSQVAALL--- 58
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
RVVA+DI M+P+ V F + D ++ E IR+ D+V+SD + G
Sbjct: 59 ---GARVVAVDINPMKPLENVTFIRGDITLPETLEKIREISPD-YDVVMSDASPKISGKW 114
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
IDHLR++ L A+ A E+L GG+F+VK FQG LK HF+ P AS
Sbjct: 115 TIDHLRSIDLARASFSIAKEVLKPGGNFVVKVFQGEEIQKFFNELKPHFRFKKFHSPQAS 174
Query: 212 RAESVEMFLLAKGFRK 227
R S E++ + K FRK
Sbjct: 175 RKRSAEVYFIGKRFRK 190
>gi|116202349|ref|XP_001226986.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88177577|gb|EAQ85045.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 399
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 110/263 (41%), Gaps = 65/263 (24%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KLLQ++E+ + + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEEFNLFEDVTRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT----------------------------------------------- 96
V +R+
Sbjct: 58 VLSRVLIKGEKFGRCAWQDREAKFRQHMLNVVPSDTTPDQEKPISKDEVPQAQLKPRKDV 117
Query: 97 RVVAIDILDMEPILGVKFFKFDFLDLDS-------------WEFIRQAIGGNPDLVLSDM 143
++V+ID+ + P+ G+ + D + E + Q DLV+SD
Sbjct: 118 KIVSIDLQPISPLPGIITLRADITHPATVPLLLKALDPDYDPETMNQQASQPVDLVISDG 177
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
A G +D L AA AL +L GG F+ K F+G + + LK F+KV
Sbjct: 178 APDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQLKIFFEKV 237
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
KP +SRA SVE F++ F+
Sbjct: 238 YVAKPRSSRASSVEAFIVCINFQ 260
>gi|322795549|gb|EFZ18245.1| hypothetical protein SINV_12039 [Solenopsis invicta]
Length = 833
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y Q A+ G+R+R+A+KL+Q+N K Q LQ +R +DL ++PG W QVA +
Sbjct: 7 IGKQRKDKYYQLAKDTGYRSRAAFKLIQLNRKFQFLQKSRVCIDLCAAPGGWMQVARQNM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTI 148
+ + VV +D+ ++PI G D R+ D+VL+D A
Sbjct: 67 PVS---SVVVGVDLFPIKPIPGCFSLVEDITTDKCKAALSRELKTWKADVVLNDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+ D + L +A A + L GG F+ K F+ + ++ +LK+ F+KV KP
Sbjct: 124 KNWLHDAFQQSVLTLSALKLATQFLRPGGWFITKVFRSKDYHPLIWVLKQLFEKVHATKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ + +
Sbjct: 184 QASRIESAEIFVVCQYY 200
>gi|147919157|ref|YP_687110.1| 23S rRNA methyltransferase J [uncultured methanogenic archaeon
RC-I]
gi|121685265|sp|Q0W1F9|RLME_UNCMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|110622506|emb|CAJ37784.1| 23S rRNA methyltransferase J [uncultured methanogenic archaeon
RC-I]
Length = 256
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y +A+ G+R+R+++KL IN+KH I++ +VDLG++PG W QVA + G
Sbjct: 5 KRDHYYNKAKQMGYRSRASFKLQFINKKHHIIKKGDTVVDLGAAPGGWLQVAKELNG--- 61
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+V+ +D+ +EPI GV+ K D ++ I + D V+ D A G+ +
Sbjct: 62 -GGKVIGVDLQRIEPIEGVETIKGDMTSPETQARIFEI-VDEVDTVICDAAPNLSGNWAL 119
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH R++ L A A ++L GG+F+VK FQG + + + K F K ASR
Sbjct: 120 DHARSIDLATVALDVATKLLKKGGNFVVKVFQGDLYENYVKEVGKRFSYATTYKSQASRQ 179
Query: 214 ESVEMFLLAKGF 225
+S E++++ KGF
Sbjct: 180 QSAEIYVIGKGF 191
>gi|6319796|ref|NP_009877.1| Spb1p [Saccharomyces cerevisiae S288c]
gi|6226708|sp|P25582|SPB1_YEAST RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase; AltName: Full=Suppressor of PAB1
protein 1
gi|1907120|emb|CAA42391.1| putative methylase [Saccharomyces cerevisiae]
gi|151943780|gb|EDN62080.1| AdoMet-dependent rRNA methyltransferase [Saccharomyces cerevisiae
YJM789]
gi|285810648|tpg|DAA07432.1| TPA: Spb1p [Saccharomyces cerevisiae S288c]
Length = 841
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+++ N + ++ +DI+ M+P+ V F+ D D +R + D
Sbjct: 58 GSWCQVASKLCPVN---SLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L + G F+ K F+ N ++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+KV KP ASR S E+F++ KGF+
Sbjct: 175 QLFEKVEATKPPASRNVSAEIFVVCKGFK 203
>gi|256270950|gb|EEU06076.1| Spb1p [Saccharomyces cerevisiae JAY291]
Length = 841
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+++ N + ++ +DI+ M+P+ V F+ D D +R + D
Sbjct: 58 GSWCQVASKLCPVN---SLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L + G F+ K F+ N ++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+KV KP ASR S E+F++ KGF+
Sbjct: 175 QLFEKVEATKPPASRNVSAEIFVVCKGFK 203
>gi|153003960|ref|YP_001378285.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaeromyxobacter sp.
Fw109-5]
gi|189044084|sp|A7H9A5|RLME_ANADF RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|152027533|gb|ABS25301.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaeromyxobacter sp.
Fw109-5]
Length = 276
Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 1/191 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y ++A+ EG RARSA+K+ +I +H++L+ + ++DLG++PG + Q+ A G
Sbjct: 8 KDFYYRKAKKEGLRARSAFKIDEILRRHRLLRKGQAVLDLGAAPGGFLQILADEVGETGV 67
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V ++ + VK D L + + IR G LV SDMA TIG + D
Sbjct: 68 AVGVD-LEPVRRLGKPWVKTAIVDLLSPGALDQIRTLHAGPFQLVTSDMAPKTIGVKITD 126
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ L A A + L GG F+ K F GG + L+ F +V ++P A R
Sbjct: 127 EARSLELVRMALDVAEKTLAPGGAFVAKVFMGGEFPVLKKELQARFDEVHVIRPEAVRES 186
Query: 215 SVEMFLLAKGF 225
S E+++L KG
Sbjct: 187 SYEVYVLGKGL 197
>gi|313673338|ref|YP_004051449.1| 23S rRNA um-2552 2'-o-methyltransferase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940094|gb|ADR19286.1| 23S rRNA Um-2552 2'-O-methyltransferase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 196
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 113/193 (58%), Gaps = 2/193 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + ++A+LEG+R+R++YKLL++N+K+++ + N ++D+G++PG WSQVA ++ G
Sbjct: 4 RKDSFYKKAKLEGYRSRASYKLLELNQKYKLFRKNDAVLDVGAAPGGWSQVALQLLGEKG 63
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
V +DI + F K D D ++ I + + D+V+SD+A T G + +
Sbjct: 64 IVVAVDILDINPLND-KRFHFIKGDIRDENTLSEITKY-ASSFDIVISDIAPNTTGQKFV 121
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH +++L + F ++ L G FL K F G ++ LK+ F+ + ++P A+R
Sbjct: 122 DHQNSINLIKTVMNFIMKTLKKNGIFLFKLFDGEERESLVKDLKELFEDIKIIRPDATRK 181
Query: 214 ESVEMFLLAKGFR 226
S E++++ KG++
Sbjct: 182 NSFEIYIICKGYK 194
>gi|116515168|ref|YP_802797.1| hypothetical protein BCc_236 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285436|sp|Q057J5|RLME_BUCCC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|116257022|gb|ABJ90704.1| ribosomal methytransferase [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 209
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 63/209 (30%), Positives = 109/209 (52%), Gaps = 4/209 (1%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
+ SS++WL R+ NDPY++ + R+RS +KL +I+E +I + ++DLGS+PG
Sbjct: 4 KKRSKSSKNWLKRNFNDPYIKERNKKKLRSRSWFKLKEIDESEKIFKKGMNVIDLGSNPG 63
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDL 138
WS+ + G + ++ A DIL M + + FF D + D + I + ++
Sbjct: 64 GWSEYTLKKIG---KSGKIFACDILPMRFLKDIVFFCGDISNSDFLKKIFLFLDKYSWNV 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SD++ G+ ID+ L + +L+ G ++K FQG N + ++
Sbjct: 121 VMSDISPNICGYSVIDNSNMFKLSNIVLKISRHVLSNNGYLIIKLFQGYGFNKYMKKIRN 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
F+ V KP ASR S E+F++A G +K
Sbjct: 181 IFELVKIYKPNASRVNSREVFIIAYGCKK 209
>gi|171682198|ref|XP_001906042.1| hypothetical protein [Podospora anserina S mat+]
gi|170941058|emb|CAP66708.1| unnamed protein product [Podospora anserina S mat+]
Length = 385
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 110/268 (41%), Gaps = 70/268 (26%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KLLQ++E+ + ++ R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEEFNLFENVTRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT----------------------------------------------- 96
V +R+ N
Sbjct: 58 VLSRVLIKNEKFGRCAWEDREAQFRQRMLNLIPSASSQEDSQQETKQDVEMANTQDETTA 117
Query: 97 ----RVVAIDILDMEPILGVKFFKFDFLDLDSWEF--------------IRQAIGGNPDL 138
++V+ID+ + P+ GV + D + Q DL
Sbjct: 118 RPDVKIVSIDLQPISPLPGVITLRADITHPATVPLLLKALDPSYDPETSTNQQAQHPVDL 177
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SD A G +D L AA AL +L GG F+ K F+G + + LK
Sbjct: 178 VISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQLKV 237
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+KV KP +SRA SVE F++ F+
Sbjct: 238 FFEKVHVAKPRSSRASSVEAFIVCINFQ 265
>gi|258405869|ref|YP_003198611.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfohalobium
retbaense DSM 5692]
gi|257798096|gb|ACV69033.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfohalobium
retbaense DSM 5692]
Length = 199
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 2/196 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +RA+ + + ARS YKL +++++ Q L +RI+DLG++PGSW+ AA+ TG+
Sbjct: 2 KKYRDHYFKRAKQDNYPARSVYKLQELDKRFQFLAKGQRILDLGAAPGSWTLFAAKKTGA 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
V + +D+E V + D L D+VLSDMA T G +
Sbjct: 62 AGRVVAVD-LQAIDIELPDHVTALQDDLLHPSPRFAEVMGSQAPFDVVLSDMAPKTTGVK 120
Query: 152 KIDHLRTMSLCEAATFFALEM-LNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D R++ L E A AL+ GG F+VK F+G + L+++F+KV KP +
Sbjct: 121 ITDQARSLELAEMARDVALDTLKTPGGTFVVKIFEGPDVPQYVSDLRQYFKKVKTAKPKS 180
Query: 211 SRAESVEMFLLAKGFR 226
SRAES E+F++ GF+
Sbjct: 181 SRAESKEIFVMGFGFK 196
>gi|118575756|ref|YP_875499.1| 23S rRNA methylase [Cenarchaeum symbiosum A]
gi|158512513|sp|A0RV28|RLME_CENSY RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|118194277|gb|ABK77195.1| 23S rRNA methylase [Cenarchaeum symbiosum A]
Length = 196
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y + A+ +G+R+R+AYKL ++N+ ++I+ + ++DLG +PGSW QVAA G
Sbjct: 7 KKDHYRKMAREQGYRSRAAYKLKELNKAYRIIGAGFTVLDLGCAPGSWMQVAASAAG--- 63
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
N V+ +D+ E + + + D D S G D V+ D++ G+ +
Sbjct: 64 NRGTVLGVDLEYAEELNHAESMRGDVEDE-SLAETVAERLGRADAVICDLSPQVSGNWSV 122
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH R +SL AA +L G+ + K F G + + F K KP ASR
Sbjct: 123 DHARQISLNYAAARIMGRVLAPKGNAVFKVFDGEYAAEFREHMGHMFSKTKSTKPQASRK 182
Query: 214 ESVEMFLLAKGFR 226
+S E++L+ GFR
Sbjct: 183 QSSELYLVCLGFR 195
>gi|134282690|ref|ZP_01769393.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 305]
gi|226196146|ref|ZP_03791731.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei Pakistan 9]
gi|134245776|gb|EBA45867.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 305]
gi|225931732|gb|EEH27734.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei Pakistan 9]
Length = 199
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 41 RAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI---------TGS 91
AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 1 MAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYARNKLAQGKRRDAVRE 60
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGH 150
+ ++A+D+L MEP+ V F + DF + + + + G DLV+SDMA G
Sbjct: 61 GGIDGTIIALDMLPMEPVADVHFIQGDFREESVLHQLEEVLAGRAVDLVISDMAPNLSGV 120
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D R +C+ A FA L G LVK F G + I+ K F+ V KP A
Sbjct: 121 AVADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEKFKHQFKTVAPRKPKA 180
Query: 211 SRAESVEMFLLAKGFRK 227
SR +S E F+L + ++
Sbjct: 181 SRDKSSETFILGRHLKQ 197
>gi|330801002|ref|XP_003288520.1| hypothetical protein DICPUDRAFT_10143 [Dictyostelium purpureum]
gi|325081423|gb|EGC34939.1| hypothetical protein DICPUDRAFT_10143 [Dictyostelium purpureum]
Length = 191
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
W+ RH+ D YV+ A+ +R+A+KL+ IN++ ++L+ +VDLG+SPGSW+Q+A
Sbjct: 1 WMKRHLTDIYVKEAKALSLVSRAAFKLININKQLRLLKPGMIVVDLGASPGSWTQIARAE 60
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTI 148
N V + + F + DF ++ + I + D +LSDMA
Sbjct: 61 VKDNGLVISVDINS--NFQLTEKAPFIQGDFTKKETQDKILEFA----DSILSDMAPHYC 114
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G ++DH R + L A FAL++L GG F+ K +GG + LL+K F V +KP
Sbjct: 115 GIPQVDHSRLIELQTTALNFALQVLKPGGSFVCKVSRGGEEKEFFKLLEKDFASVKTMKP 174
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E++ +AK F
Sbjct: 175 DASRKESTEIYYIAKDF 191
>gi|85086230|ref|XP_957655.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Neurospora crassa
OR74A]
gi|28918749|gb|EAA28419.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Neurospora crassa
OR74A]
Length = 387
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/262 (27%), Positives = 109/262 (41%), Gaps = 64/262 (24%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KLLQ++E+ + ++ R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEEFNLFENVTRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT----------------------------------------------R 97
V +R+ +
Sbjct: 58 VLSRVLIKGEKFGRCAWQDREAKFRQQMLNVFPEKQDAQDEVQRVQATQESTPAPREQVK 117
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWEF-------------IRQAIGGNPDLVLSDMA 144
+V+ID+ + P+ G+ + D + + DLV+SD A
Sbjct: 118 IVSIDLQPISPLPGIITLRADITHPATVPLLLKALDPDFDPSTMNPQASHPVDLVISDGA 177
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G +D L AA AL +L GG F+ K F+G + + LK F+KV
Sbjct: 178 PDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQLKVFFEKVY 237
Query: 205 HVKPVASRAESVEMFLLAKGFR 226
KP +SRA SVE F++ F+
Sbjct: 238 VAKPRSSRASSVEAFIVCINFQ 259
>gi|330813886|ref|YP_004358125.1| cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase J [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486981|gb|AEA81386.1| cell division protein FtsJ / Ribosomal RNA large subunit
methyltransferase J [Candidatus Pelagibacter sp.
IMCC9063]
Length = 208
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 125/209 (59%), Gaps = 5/209 (2%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
+K + ++ SS+ WL R +NDP V A+ + +R+R+ +K L+INEKHQ L++N I+DL
Sbjct: 2 KKFQKKNLSHSSKLWLTRQLNDPLVAEAKKQNYRSRAIFKFLEINEKHQFLKNNLNIIDL 61
Query: 75 GSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG 134
G++PGSWSQ ++I N +A+D+LD +PI K K DF + + + G
Sbjct: 62 GAAPGSWSQHTSKINKDGVN----IALDLLDTKPINNCKIIKGDFTSDEVQNKLVNLLEG 117
Query: 135 -NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDIL 193
D+VLSD+A + G+R +D +R+ + F+L+ L G L+KTF G +++
Sbjct: 118 KKFDIVLSDIAENSTGNRSLDSMRSNIITVEVMKFSLKHLKKNGKILIKTFSGVGNEEVV 177
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ KK+F K I +KP +SR +S E++L
Sbjct: 178 DMAKKNFSKHIFIKPKSSRKDSKELYLYC 206
>gi|282164555|ref|YP_003356940.1| ribosomal RNA large subunit methyltransferase J [Methanocella
paludicola SANAE]
gi|282156869|dbj|BAI61957.1| ribosomal RNA large subunit methyltransferase J [Methanocella
paludicola SANAE]
Length = 254
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 104/192 (54%), Gaps = 6/192 (3%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y +A+ G+R+R+A+KL INEK +++ +VDLG++PG W QVA I+
Sbjct: 5 KRDFYYNKAKQMGYRSRAAFKLKFINEKFGLIKKGDAVVDLGAAPGGWLQVAKEIS---- 60
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
V+ +D+ +EP+ G K D ++ I + + + V+ D A G+ +
Sbjct: 61 -EGTVIGVDLQRIEPVEGAVTIKGDMTSPETQAKIFEKVEKV-NAVICDAAPNLSGNWAL 118
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH R++ L + A A ++L GG+FLVK FQG + + + F +V K ASR
Sbjct: 119 DHARSIDLSKTALDVAAKILAPGGNFLVKVFQGDLYQGFVDEVGRRFSRVYTYKSPASRQ 178
Query: 214 ESVEMFLLAKGF 225
+S E++++ KGF
Sbjct: 179 QSAEIYVIGKGF 190
>gi|327400140|ref|YP_004340979.1| Ribosomal RNA large subunit methyltransferase E [Archaeoglobus
veneficus SNP6]
gi|327315648|gb|AEA46264.1| Ribosomal RNA large subunit methyltransferase E [Archaeoglobus
veneficus SNP6]
Length = 209
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 108/194 (55%), Gaps = 7/194 (3%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y A+ +G+R+R+A+KLLQ+N+ ++++ +++DLG+SPG WSQVA +
Sbjct: 10 RQDYYYWEAKKKGYRSRAAFKLLQMNKTFKLIKKGSKVLDLGASPGGWSQVAVEL----- 64
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
VVA+DI M PI GV F + D ++ E +A+ D V+ D + GH I
Sbjct: 65 -GAEVVAVDINPMPPIEGVTFIQGDITKEETLEK-IKAVSREYDAVICDASPKITGHWSI 122
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DHL +M L AA A ++L GG+F+VK FQG + K +F+ P ASR
Sbjct: 123 DHLISMDLARAAFNIARQVLKPGGNFVVKMFQGEEIQKVFNEFKPYFRFKKLHSPPASRK 182
Query: 214 ESVEMFLLAKGFRK 227
S E++ + K F+K
Sbjct: 183 RSAEIYFIGKRFKK 196
>gi|73621933|sp|Q751U1|SPB1_ASHGO RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
Length = 845
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
R+ + +S+ L D Y A+ +G+RARS++K++QINEK L+ ++ ++DL ++P
Sbjct: 3 RTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+ + N + ++ +DI+ M+P+ V F+ D D +R + D
Sbjct: 58 GSWCQVASNLCPVN---SLIIGVDIVPMQPMPNVITFQSDITTEDCRSKLRGYMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A + D L A A+E L +GG F+ K F+ N ++ + +
Sbjct: 115 TVLHDGAPNVGLNWVQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLMWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F KV KP ASR S E+F++ KGF+
Sbjct: 175 QLFDKVEATKPPASRNVSAEIFVVCKGFK 203
>gi|241956944|ref|XP_002421192.1| 2'-O-ribose RNA methyltransferase, putative; AdoMet-dependent rRNA
methyltransferase, putative;
S-adenosyl-L-methionine-dependent methyltransferase,
putative [Candida dubliniensis CD36]
gi|223644535|emb|CAX41353.1| 2'-O-ribose RNA methyltransferase, putative [Candida dubliniensis
CD36]
Length = 830
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSPGSWSQVAA 86
+H D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++PGSW QVA+
Sbjct: 6 KKHSKGRLDRYYYLAKEKGYRARSSFKIVQINEKYGHFLEKSKVVIDLCAAPGSWCQVAS 65
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPDLVLSDMAY 145
++ N + ++ +DI+ ++P+ V F+ D D +R + D VL D A
Sbjct: 66 QLCPVN---SLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKADTVLHDGAP 122
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
D L A A+E L GG F+ K F+ N+++ + ++ F+KV
Sbjct: 123 NVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKIFRSRDYNNLMWVFQQLFEKVEA 182
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP ASR S E+F++ KGF+
Sbjct: 183 TKPPASRNVSAEIFVVCKGFK 203
>gi|55379460|ref|YP_137310.1| ribosomal RNA large subunit methyltransferase J [Haloarcula
marismortui ATCC 43049]
gi|74516619|sp|Q5UYP9|RLME_HALMA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|55232185|gb|AAV47604.1| ribosomal RNA large subunit methyltransferase J [Haloarcula
marismortui ATCC 43049]
Length = 263
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 7/196 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y RA+ EG+RARSAYKL Q+++ +L R +VDLG++PG W QVAA G
Sbjct: 4 KDDYYNRAKQEGYRARSAYKLQQLDDTAGLLGEGRTVVDLGAAPGGWMQVAAERIGERGT 63
Query: 95 NTRVVAIDILDMEPI-LGVKFFKFDFLDLDSWEFIRQAIG------GNPDLVLSDMAYPT 147
V I D+E V++ + D + + + IR+ +G G D+V+SDMA
Sbjct: 64 LVGVDRQTIDDLEDPEPTVEYVRGDMTEDSTKDEIREIVGESDGSGGPVDVVISDMAPNM 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G +DH R++ L A A ++L+ GGDF K F G +D++ ++ F+ V V+
Sbjct: 124 TGQYDLDHARSVHLVRQAFEVATDLLDAGGDFCAKVFDGQDLDDLIADIEPEFEYVREVR 183
Query: 208 PVASRAESVEMFLLAK 223
P ASR S E++L+AK
Sbjct: 184 PDASRDSSSELYLVAK 199
>gi|219110463|ref|XP_002176983.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411518|gb|EEC51446.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 315
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 36/233 (15%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ---------------SNRRIVDL 74
L+R D + + A+ +G+RARSA+KLLQ++ + I +R VDL
Sbjct: 4 LSRDKRDVFYRLAKEKGYRARSAFKLLQVDAEFDIFGARGAPASLGNTIEPLRVQRAVDL 63
Query: 75 GSSPGSWSQVAARI--------------------TGSNANNTRVVAIDILDMEPILGVKF 114
++PGSWSQV + +VA+D+ M PI GV
Sbjct: 64 CAAPGSWSQVLSDKLYELNHATGDAGANSDQALDIDEQPEEPSIVAVDLQPMAPIDGVLC 123
Query: 115 FKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML 173
+ D + + I+ G +LV+ D A G +D L +A +L
Sbjct: 124 LQGDITAQSTAQDIIKHFQGNRAELVVCDGAPDVTGLHDVDEYLQGQLLLSAMMITTHVL 183
Query: 174 NIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G F+ K F+G + L+ F++V KP +SR S+E F++ + F+
Sbjct: 184 CERGTFVAKIFRGRNVGFLYAQLRLLFERVSIAKPTSSRNSSMESFVVCQRFK 236
>gi|312216350|emb|CBX96301.1| similar to tRNA (uridine-2'-O-)-methyltransferase TRM7
[Leptosphaeria maculans]
Length = 388
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 77/260 (29%), Positives = 110/260 (42%), Gaps = 63/260 (24%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ EGWRARSAYKLLQ++E+ + + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEEGWRARSAYKLLQLDEEFNLFEGVTRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNTR---------------------------------------------- 97
V +R+ R
Sbjct: 58 VLSRVLIKGEKFGRAGWQEKQAAARNYVLGLDNTKTPAPAEEEKKDIQPAERPRPREGVR 117
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA------------IGGNPDLVLSDMAY 145
+VAID+ M P+ GV + D + + +A DLV+SD A
Sbjct: 118 IVAIDLQPMSPLEGVTTMRADITHPSTIPLMLKALDPDTYDPTTPQTSSPVDLVISDGAP 177
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
G +D L AA AL +L GG F+ K F+G + + LK F +V
Sbjct: 178 DVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLLFAQLKTVFDRVRV 237
Query: 206 VKPVASRAESVEMFLLAKGF 225
KP +SRA S+E F++ +GF
Sbjct: 238 AKPRSSRASSIEAFVVCEGF 257
>gi|332025804|gb|EGI65961.1| Putative rRNA methyltransferase 3 [Acromyrmex echinatior]
Length = 836
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 104/197 (52%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y Q A+ G+R+R+A+KL+Q+N K + Q +R +DL ++PG W QVA +
Sbjct: 7 IGKQRKDKYYQLAKETGYRSRAAFKLIQLNRKFEFFQKSRVCIDLCAAPGGWMQVARQ-- 64
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
+ + ++ V+ +D+ ++PI G D + R+ D+VL+D A
Sbjct: 65 -NMSISSIVIGVDLFPIKPIPGCLSLVEDIMTDKCRVAISRELKTWKADVVLNDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
D + + L +A A + L GG F+ K F+ N ++ +LK+ F+KV KP
Sbjct: 124 KSWLHDAYQQVVLTLSALKLATQFLKAGGWFVTKVFRSKDYNPLIWVLKQLFKKVHATKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E+F++ + +
Sbjct: 184 QASRNESAEIFVVCQYY 200
>gi|320352800|ref|YP_004194139.1| 23S rRNA Um-2552 2'-O-methyltransferase [Desulfobulbus propionicus
DSM 2032]
gi|320121302|gb|ADW16848.1| 23S rRNA Um-2552 2'-O-methyltransferase [Desulfobulbus propionicus
DSM 2032]
Length = 200
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
R D Y ++A+ + + ARS YKL + K++ L+ +R++DLG PGSWS A I G
Sbjct: 2 RKEQDYYFKKAKKDNYPARSVYKLEEAQLKYKFLKGGQRVLDLGCHPGSWSLYTAGIVGE 61
Query: 92 NANNT--RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
+ +IL +P + + +D + ++++Q G +VLSDMA T G
Sbjct: 62 KGTVVAADLQRTEILTQKPHAEIHWLCYDVFSEEFVDYLKQHWPG-FHVVLSDMAPRTTG 120
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+ DH +++ L ++ L+ G K FQG L K F V +KP
Sbjct: 121 SQYADHQQSLLLARRVLELSVLFLHENGTLYCKVFQGEDFPAFLQECKPLFATVKVMKPK 180
Query: 210 ASRAESVEMFLLAKGFRK 227
+SR ES E+F+L +GFR+
Sbjct: 181 SSRLESREVFVLGRGFRR 198
>gi|308159656|gb|EFO62181.1| FtsJ cell division protein, putative [Giardia lamblia P15]
Length = 1084
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ ++ D Y + A+ G+R+R+AYKL+Q++ ++ L S + ++DL ++PGSWSQVAA
Sbjct: 8 IGKNRKDEYYRLAREAGYRSRAAYKLIQLDAQYGFLSSTKCLIDLCAAPGSWSQVAAMKM 67
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTI 148
+ +V++D+ ++PI GV F D + G D V+ D A
Sbjct: 68 PVG---SLIVSVDLDPIKPINGVVSFCSDITTAACRNALTEKLKGWAVDTVIHDGAPNMG 124
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+D +L AA A E L + G F+ K F+ + +L +L++ F+KV KP
Sbjct: 125 TAWGVDAFGQNTLVLAACKLATEFLRMHGTFITKIFRSADHDALLYVLRQLFEKVEITKP 184
Query: 209 VASRAESVEMFLLAKGFR 226
ASR S E F + ++
Sbjct: 185 RASRDNSSECFAVCLRYK 202
>gi|313124823|ref|YP_004035087.1| 23S rRNA um-2552 2'-o-methyltransferase [Halogeometricum
borinquense DSM 11551]
gi|312291188|gb|ADQ65648.1| 23S rRNA Um-2552 2'-O-methyltransferase [Halogeometricum
borinquense DSM 11551]
Length = 256
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 2/190 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y +A+ EG+R RSAYKL Q++E+ + +VDLG++PG W QVAA +
Sbjct: 3 RDHYYNKAKQEGYRTRSAYKLKQLDEETGLFGPGNTVVDLGAAPGGWLQVAAEEVSDHGT 62
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKI 153
V + + V+ + D D ++ E + D+V+SDMA G +
Sbjct: 63 VVGVD-LQRIRDIDADNVETIRGDMTDEETKESLRERIGEEGADVVISDMAPNMTGEYSL 121
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH R++ L A AL++L GGDF VK F G D +++ FQ V ++P ASR
Sbjct: 122 DHARSIHLARQAFEVALDLLPAGGDFAVKVFDGQDLADFRADVEEEFQYVRSIRPDASRD 181
Query: 214 ESVEMFLLAK 223
ES E +L+ K
Sbjct: 182 ESSEQYLVGK 191
>gi|302309076|ref|NP_986282.2| AFR734Cp [Ashbya gossypii ATCC 10895]
gi|299790933|gb|AAS54106.2| AFR734Cp [Ashbya gossypii ATCC 10895]
Length = 830
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
R+ + +S+ L D Y A+ +G+RARS++K++QINEK L+ ++ ++DL ++P
Sbjct: 3 RTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+ + N + ++ +DI+ M+P+ V F+ D D +R + D
Sbjct: 58 GSWCQVASNLCPVN---SLIIGVDIVPMQPMPNVITFQSDITTEDCRSKLRGYMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A + D L A A+E L +GG F+ K F+ N ++ + +
Sbjct: 115 TVLHDGAPNVGLNWVQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLMWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F KV KP ASR S E+F++ KGF+
Sbjct: 175 QLFDKVEATKPPASRNVSAEIFVVCKGFK 203
>gi|255715916|ref|XP_002554239.1| KLTH0F00704p [Lachancea thermotolerans]
gi|238935622|emb|CAR23802.1| KLTH0F00704p [Lachancea thermotolerans]
Length = 830
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK ++ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKIIQINEKFGHFMEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+ + N + ++ +DI+ M+P+ V F+ D D +R + D
Sbjct: 58 GSWCQVASNLCPVN---SLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L +GG F+ K F+ N ++ +
Sbjct: 115 TVLHDGAPNVGLGWAQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLIWVFS 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F KV KP ASR S E+F++ KGF+
Sbjct: 175 QLFDKVEATKPPASRNVSAEIFVVCKGFK 203
>gi|332526116|ref|ZP_08402254.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rubrivivax
benzoatilyticus JA2]
gi|332109959|gb|EGJ10587.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Rubrivivax
benzoatilyticus JA2]
Length = 204
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 6/191 (3%)
Query: 40 QRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN----- 94
+ AQ +G+R+R+AYKL +I+E +++ + VDLG++PG+WSQ R
Sbjct: 2 KAAQRDGYRSRAAYKLKEIDEALGLIKPGQVAVDLGATPGAWSQYLRRRFAPEGAAAGAL 61
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+ ++A+DILD EPI GV F + DF + + + G D+V+SDMA G
Sbjct: 62 DGTIIALDILDFEPIEGVTFLQGDFREDEVAARLAAELAGRPVDIVVSDMAPNLSGIPVS 121
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
D R L E A FAL+ L G + K F G + ++ L K F+ V +KP ASR
Sbjct: 122 DAARIAHLVELAVEFALQHLKPEGALVCKAFHGSGYSQLVKLFKDSFRVVKPIKPKASRD 181
Query: 214 ESVEMFLLAKG 224
+S E FL+ G
Sbjct: 182 KSAETFLVGIG 192
>gi|146180987|ref|XP_001021884.2| FtsJ-like methyltransferase family protein [Tetrahymena
thermophila]
gi|146144344|gb|EAS01639.2| FtsJ-like methyltransferase family protein [Tetrahymena thermophila
SB210]
Length = 329
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 8/203 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
+ D Y ++A+ + +RARSAYKLLQI+E I ++ R++DL ++PGSWSQV ++
Sbjct: 70 TKDKRDIYYRKAKEDCFRARSAYKLLQIDEVFGIFENAERVIDLCAAPGSWSQVVSKKLT 129
Query: 90 ------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSD 142
SN + R+++ID+ +M PI V + D ++ + I GN +LV+ D
Sbjct: 130 EKGLFKDSNGEDVRIISIDLQEMAPIDNVVQLQGDITKKETVDEILHKFKGNKANLVIDD 189
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A G ID L AA E L GG F+ K F+G + K F+
Sbjct: 190 GAPDVTGFHDIDQYLQSQLMVAALNICNETLKKGGHFVAKIFKGTDIKFLYSQFKLFFKS 249
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
V VKP +SRA SVE FL+ +
Sbjct: 250 VYVVKPKSSRASSVENFLVCLQY 272
>gi|325187807|emb|CCA22351.1| ribosomal RNA large subunit methyltransferase J puta [Albugo
laibachii Nc14]
Length = 233
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 6/218 (2%)
Query: 12 GLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRI 71
+K K + + S W++R NDPYV++A+ E R+R+A+KL +N+K I++ +
Sbjct: 15 KRCEKEKKHTAKAS---WIHRQWNDPYVKQARRENLRSRAAFKLRDLNKKFDIIRHGDTV 71
Query: 72 VDLGSSPGSWSQVAARITGSNANNT--RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
+DLG++PG W+Q+AA + + RV+A+D++ M+ + G DF D + I
Sbjct: 72 LDLGAAPGGWTQIAAMESCGEYDRDRRRVIAVDLVPMQIVEGASIVMGDFRDSSTRNEIG 131
Query: 130 QAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
Q + G D+VLSDMA GH D + + LC A A L +GG+F+ K Q
Sbjct: 132 QLLEGRMVDVVLSDMAPRFTGHFLKDSQQQLRLCYNALLMAELYLKVGGNFVTKVLQSED 191
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
D +K F+ V KP +SR+ES E+F + K +R
Sbjct: 192 LEDFRGQMKTQFKSVKGYKPSSSRSESTELFFIGKEYR 229
>gi|269861051|ref|XP_002650241.1| 23S rRNA methylase [Enterocytozoon bieneusi H348]
gi|220066331|gb|EED43817.1| 23S rRNA methylase [Enterocytozoon bieneusi H348]
Length = 556
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 2/197 (1%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y + A+ G+R+R+A+KLL++N+K+ L+ R +DL ++PG W Q+ +
Sbjct: 4 VKKQRIDEYYRLAKERGYRSRAAFKLLELNKKYNFLKDCRIAIDLCAAPGGWLQILMQEM 63
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
+ I F E I D+V+ D A
Sbjct: 64 PPTRKIIGIDLDKIERCG--DCHTFQSDITTQECRRELICLLDNNKADIVVHDGAPNFGN 121
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
D L +A A E L G F+ K + IL LL+ F+ V KP+
Sbjct: 122 DPSKDIFIQNDLVLSALKLATEFLKTNGIFVTKIHRSENFVKILNLLRSLFKHVTITKPL 181
Query: 210 ASRAESVEMFLLAKGFR 226
+SR S E + + + ++
Sbjct: 182 SSRTTSAETYAVCRLYK 198
>gi|145354875|ref|XP_001421700.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581938|gb|ABO99993.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 376
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 98/197 (49%), Gaps = 5/197 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
R I D Y A+ +G+R+R+A+KL+Q+N K+ L R +DL ++PG W QVA +
Sbjct: 87 ARSIADKYYYLAKEQGFRSRAAFKLVQLNRKYDFLSKARACMDLCAAPGGWLQVAQKYMP 146
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG--NPDLVLSDMAYPTI 148
++ +V +D+ + PI GV D +++ D+V+ D A
Sbjct: 147 ---MSSTIVGVDLAPIRPIRGVTTLVEDITTQSCRAALKRVTPQGLKYDVVIHDGAPNVG 203
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+ + +L + A E L GG F+ K F+ + +L ++ F+KV KP
Sbjct: 204 GNFAKESYTQAALTLDSLRLATEFLGPGGWFVTKVFRSVEYHALLYAFQQLFKKVESTKP 263
Query: 209 VASRAESVEMFLLAKGF 225
VASR S E++++ G+
Sbjct: 264 VASRGTSAEIYVVCSGY 280
>gi|325114439|emb|CBZ49995.1| putative ribosomal RNA large subunit methyltransferase J [Neospora
caninum Liverpool]
Length = 467
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 20/221 (9%)
Query: 6 GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
G S G +++N++ + +S +W+ R I D YV RAQ R+R+A+KL Q++++
Sbjct: 243 GRRSYSG-EPRIRNKNSRHTS-EWIKRQITDRYVLRAQERNLRSRAAFKLEQLDDEFLFF 300
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+ N+ +VDLG+ PG WSQVA + RVVA+D + M+P+ F + +
Sbjct: 301 RKNQVVVDLGAYPGGWSQVALDRIRAGGGEGRVVAVDPVAMDPLPHHTFIQGSVGQAGTL 360
Query: 126 EFIRQ-AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
+ + + D+VLSDMA IG ++ DHL LC A+
Sbjct: 361 QALLEGLGESKADVVLSDMAPACIGVKQDDHLNCAELCLHASDLM--------------- 405
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
TN+ L+ F++V KP A R ES EM+ + + F
Sbjct: 406 --EQTNNFKIYLRTRFKRVSSAKPRACRPESREMYFVCQHF 444
>gi|50303355|ref|XP_451619.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640751|emb|CAH02012.1| KLLA0B01980p [Kluyveromyces lactis]
Length = 289
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/258 (28%), Positives = 118/258 (45%), Gaps = 53/258 (20%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
R + WL R ND + + A+ + +R+R+A+KL+ I++K++ + N++++DLG +P
Sbjct: 23 VRYNSNAQNRWLARQKNDHFTKAAKEQQFRSRAAFKLMDIDDKYRFFKQNQKVLDLGFAP 82
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR--------- 129
G+WSQVA + GS ++ +D+L P GV + + L + E IR
Sbjct: 83 GAWSQVARKRIGSGGM---IMGVDLLRCTPPKGVYSLQANILSKKTHELIRLCFARHIQL 139
Query: 130 -----------------------------------------QAIGGNPDLVLSDMAYPTI 148
D+VLSDM T
Sbjct: 140 NKHDQLHKDHGYLQHMLEEELNHLKETEEYKELFSQTDISQNIERYPVDVVLSDMMANTT 199
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G + DH +M LC+AA A+++L GG F K + G + LKK F+KV KP
Sbjct: 200 GIQSKDHYMSMDLCDAALIVAIDLLKPGGSFTCKLYAGSEDTLLEKRLKKVFKKVDRFKP 259
Query: 209 VASRAESVEMFLLAKGFR 226
ASR ES E++ +A+G +
Sbjct: 260 NASRNESKELYFVARGKK 277
>gi|242014003|ref|XP_002427688.1| cell division protein ftsj, putative [Pediculus humanus corporis]
gi|212512118|gb|EEB14950.1| cell division protein ftsj, putative [Pediculus humanus corporis]
Length = 228
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 80/217 (36%), Positives = 120/217 (55%), Gaps = 8/217 (3%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
V R +S +WL RH ND YV++A+ E +R RSA+KLL+IN+K+ +++ ++D+G+
Sbjct: 9 VGRRCKSFNSTEWLKRHNNDIYVEKAKKENYRCRSAFKLLEINDKYNLVKPGDVVLDVGA 68
Query: 77 SPGSWSQVAARITGSNANNTR-----VVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQ 130
SPGSWSQV A T SN + V+AIDI + PI GV DF + S E I+
Sbjct: 69 SPGSWSQVLASKTNSNGKIDKSPKGTVIAIDISPIFPIEGVTILSNLDFTNESSQEKIKG 128
Query: 131 AIGG-NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
G D + SDMA + G + +D + L + FF++ L GG L+K + G
Sbjct: 129 ITNGEKFDFIFSDMAPKSTGVKSLDQENIIKLLYSVLFFSVNNLKGGGGILLKIWDGQH- 187
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ +KK F + +KP AS S E +LL + F+
Sbjct: 188 ERLVNDIKKFFNLLHFIKPKASYKSSSESYLLGREFK 224
>gi|67480103|ref|XP_655413.1| ribosomal RNA methyltransferase [Entamoeba histolytica HM-1:IMSS]
gi|56472547|gb|EAL50027.1| ribosomal RNA methyltransferase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 829
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 4/195 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y A+ G+RARSA+KL+Q+N+++ L S ++DL ++PG W QVA +
Sbjct: 9 KERLDKYYHLAKQYGYRARSAFKLVQMNKRYDFLSSAHILIDLCAAPGGWCQVATKEMPV 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGH 150
+++ +D+ + PI + D + +++ + G D+VL D +
Sbjct: 69 E---SKIFGVDLEPILPIPRCTTYVGDITTGMCFAEMKKLMKGEHADVVLHDGSPNMGKS 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D LC AA FA+ L GG F+ K F+ IL + +K F+ VI KP A
Sbjct: 126 WIQDAYTQSELCIAALKFAVTFLKKGGWFISKVFRSQDYYAILFVFEKFFKSVIATKPPA 185
Query: 211 SRAESVEMFLLAKGF 225
SR S E++L+ K F
Sbjct: 186 SRNTSAEVYLVCKDF 200
>gi|302672597|ref|XP_003025986.1| hypothetical protein SCHCODRAFT_62536 [Schizophyllum commune H4-8]
gi|300099666|gb|EFI91083.1| hypothetical protein SCHCODRAFT_62536 [Schizophyllum commune H4-8]
Length = 251
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 79/226 (34%), Positives = 116/226 (51%), Gaps = 22/226 (9%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS--NRRIVDLGSSP 78
SS+ W++R + DPYV+ R+RSA+KLL+I +H + R +VDLG++P
Sbjct: 10 GSTPSSKAWVSRQLRDPYVK--HRLDLRSRSAFKLLEIEAQHNFIDKPHVRGVVDLGAAP 67
Query: 79 GSWSQVAARITGSNAN---NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR------ 129
G WSQ+ +R G +VA+D+L M PI GV+ K DFL + + +R
Sbjct: 68 GGWSQIVSRKLGCTRKARGRGTIVAVDLLPMVPIPGVRTLKGDFLAPSTVQKVRTLLATS 127
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN--------IGGDFLV 181
+ GG D++LSDMA G D ++ +CE+ FA L GG L+
Sbjct: 128 ENPGGKADIILSDMAANASGTGVRDIQSSLDICESVYSFAARNLRSMQETGDSWGGVLLI 187
Query: 182 KTFQGGTTNDI-LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F D L+ +F+KV VKP ASR++S E + L GF+
Sbjct: 188 KYFAHPLLEDFSRENLQPNFRKVHLVKPPASRSDSRETYFLCMGFK 233
>gi|223997678|ref|XP_002288512.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975620|gb|EED93948.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 208
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-VA 100
A+ +G+R+R+A+KL QIN K IL++ + I+DL ++PG W+QV AR +N++ T + V
Sbjct: 5 AKEQGFRSRAAFKLTQINRKFNILKNAQTIIDLCAAPGGWTQVCARSLPNNSSTTILAVD 64
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTM 159
I + V D IR + G D+VL D A D
Sbjct: 65 ILPIRNLNSKNVITLIGDITTEKCKAAIRSEMQGAGADVVLCDGAPNVGASYDRDAYMQN 124
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
L A A E L G F+ K ++ + L + K+ F V VKP ASR++S E+F
Sbjct: 125 ELALHALKCACEHLRKKGTFVTKLYRSSDYSAYLWVAKQFFHTVQAVKPSASRSQSAEIF 184
Query: 220 LLAKGF 225
L+ +G+
Sbjct: 185 LVCEGY 190
>gi|146416169|ref|XP_001484054.1| hypothetical protein PGUG_03435 [Meyerozyma guilliermondii ATCC
6260]
Length = 819
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DKYYFLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+ + N + ++ +DI+ ++P+ F+ D D +R + D
Sbjct: 58 GSWCQVASNLCPIN---SLIIGVDIVPIKPLPNCITFQSDITTEDCRSRLRGHMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L +GG F+ K F+ N+++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTLGGTFVTKIFRSRDYNNLMWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+KV KP ASR S E+F++ KGF+
Sbjct: 175 QLFEKVEATKPPASRNVSAEIFVVCKGFK 203
>gi|68491995|ref|XP_710224.1| potential rRNA methyltransferase [Candida albicans SC5314]
gi|73621935|sp|Q59KF3|SPB1_CANAL RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|46431386|gb|EAK90959.1| potential rRNA methyltransferase [Candida albicans SC5314]
Length = 845
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSPGSWSQVAA 86
+H D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++PGSW QVA+
Sbjct: 6 KKHSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVAS 65
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPDLVLSDMAY 145
++ N + ++ +DI+ ++P+ V F+ D D +R + D VL D A
Sbjct: 66 QLCPIN---SLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKADTVLHDGAP 122
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
D L A A+E L GG F+ K F+ N+++ + ++ F+KV
Sbjct: 123 NVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKIFRSRDYNNLMWVFQQLFEKVEA 182
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP ASR S E+F++ KGF+
Sbjct: 183 TKPPASRNVSAEIFVVCKGFK 203
>gi|308273424|emb|CBX30026.1| Ribosomal RNA large subunit methyltransferase J [uncultured
Desulfobacterium sp.]
Length = 208
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 8/208 (3%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
+ + W D Y + A+ E + ARS YKL ++ ++++++ R++DLG P
Sbjct: 9 MKRLSPKANRW-----EDHYSRLAKKENYPARSVYKLQELQSRYKLIKKGGRVLDLGCYP 63
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL 138
GSW+ A+ + G VV ID+ ++ + + L+ + +IG D+
Sbjct: 64 GSWTIYASDLVGQKGT---VVGIDLKKLDIKIPSNALVYQCDILNIDNSMLLSIGNKFDI 120
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA T G++ +D +R+ LC AA A +L G FL K FQG N L ++K
Sbjct: 121 VISDMAPATTGNKSVDAVRSYDLCLAALDVANNVLLHNGSFLCKIFQGEDFNKFLEMVKA 180
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F KP +SR S E++++ G +
Sbjct: 181 AFNTYKIFKPQSSRKLSKEIYIIGLGKK 208
>gi|68491984|ref|XP_710229.1| potential rRNA methyltransferase [Candida albicans SC5314]
gi|46431392|gb|EAK90964.1| potential rRNA methyltransferase [Candida albicans SC5314]
Length = 853
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSPGSWSQVAA 86
+H D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++PGSW QVA+
Sbjct: 6 KKHSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVAS 65
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPDLVLSDMAY 145
++ N + ++ +DI+ ++P+ V F+ D D +R + D VL D A
Sbjct: 66 QLCPIN---SLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKADTVLHDGAP 122
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
D L A A+E L GG F+ K F+ N+++ + ++ F+KV
Sbjct: 123 NVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKIFRSRDYNNLMWVFQQLFEKVEA 182
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP ASR S E+F++ KGF+
Sbjct: 183 TKPPASRNVSAEIFVVCKGFK 203
>gi|255732365|ref|XP_002551106.1| hypothetical protein CTRG_05404 [Candida tropicalis MYA-3404]
gi|240131392|gb|EER30952.1| hypothetical protein CTRG_05404 [Candida tropicalis MYA-3404]
Length = 632
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 8/201 (3%)
Query: 31 NRHIN---DPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSPGSWSQVAA 86
+H D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++PGSW QVA+
Sbjct: 6 KKHSKGRLDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAPGSWCQVAS 65
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPDLVLSDMAY 145
++ N + ++ +DI+ ++P+ V F+ D D +R + D VL D A
Sbjct: 66 QLCPVN---SLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKADTVLHDGAP 122
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
D L A A+E L GG F+ K F+ N+++ + ++ F+KV
Sbjct: 123 NVGLGWVQDAFTQSQLTLQALKLAVENLAAGGTFVTKIFRSRDYNNLMWVFQQLFEKVEA 182
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP ASR S E+F++ KGF+
Sbjct: 183 TKPPASRNVSAEIFVVCKGFK 203
>gi|260941558|ref|XP_002614945.1| hypothetical protein CLUG_04960 [Clavispora lusitaniae ATCC 42720]
gi|238851368|gb|EEQ40832.1| hypothetical protein CLUG_04960 [Clavispora lusitaniae ATCC 42720]
Length = 825
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPD 137
GSW QVA+ + N + ++ +DI+ ++P+ F+ D D +R D
Sbjct: 58 GSWCQVASNLCPIN---SLIIGVDIVPIKPLPNCITFQSDITTEDCRSKLRGHLKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A E L GG F+ K F+ N+++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFTQSQLVLKALKLACENLTQGGTFVTKVFRSKDYNNLMWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F KV KP ASR S E+F++ KGF+
Sbjct: 175 QLFDKVEATKPPASRNVSAEIFVVCKGFK 203
>gi|190347121|gb|EDK39337.2| hypothetical protein PGUG_03435 [Meyerozyma guilliermondii ATCC
6260]
Length = 819
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 113/209 (54%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DKYYFLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+ + N + ++ +DI+ ++P+ F+ D D +R + D
Sbjct: 58 GSWCQVASNLCPIN---SLIIGVDIVPIKPLPNCITFQSDITTEDCRSRLRGHMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L +GG F+ K F+ N+++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTLGGTFVTKIFRSRDYNNLMWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+KV KP ASR S E+F++ KGF+
Sbjct: 175 QLFEKVEATKPPASRNVSAEIFVVCKGFK 203
>gi|171318232|ref|ZP_02907395.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia ambifaria
MEX-5]
gi|171096576|gb|EDT41470.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Burkholderia ambifaria
MEX-5]
Length = 199
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 41 RAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN----- 95
AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 1 MAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGATPGSWSQYARNKLAQGKKRDTQRE 60
Query: 96 ----TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGH 150
++A+D+L MEPI V F + DF + D + + G DLV+SDMA G
Sbjct: 61 GGIDGTIIALDLLPMEPIADVHFIQGDFREDDVLRQLEDLLEGRAVDLVISDMAPNLSGV 120
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D R LC+ A FA L G LVK F G + I+ K+ F+ V KP A
Sbjct: 121 ASADAARIEHLCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEKFKQQFKVVAPRKPKA 180
Query: 211 SRAESVEMFLLAKGFRK 227
SR +S E F+L + ++
Sbjct: 181 SRDKSSETFILGRQLKQ 197
>gi|126138018|ref|XP_001385532.1| AdoMet-dependent rRNA methyltransferase SPB1 (2'-O-ribose RNA
methyltransferase) (S-adenosyl-L-methionine-dependent
methyltransferase) [Scheffersomyces stipitis CBS 6054]
gi|126092810|gb|ABN67503.1| AdoMet-dependent rRNA methyltransferase SPB1 (2'-O-ribose RNA
methyltransferase) (S-adenosyl-L-methionine-dependent
methyltransferase) [Scheffersomyces stipitis CBS 6054]
Length = 831
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+++ N + ++ +DI+ ++P+ F+ D D +R + D
Sbjct: 58 GSWCQVASQLCPIN---SLIIGVDIVPIKPLPNCITFQSDITTEDCRSRLRGHMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L GG F+ K F+ N+++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLAAGGTFVTKIFRSRDYNNLMWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F KV KP ASR S E+F++ KGF+
Sbjct: 175 QLFDKVEATKPPASRTVSAEIFVVCKGFK 203
>gi|298529995|ref|ZP_07017397.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509369|gb|EFI33273.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfonatronospira
thiodismutans ASO3-1]
Length = 198
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 2/194 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ I D Y ++A+ + + ARS YKL +++ + +L+ ++++DLG+SPGSW AA+ S
Sbjct: 2 KKIRDHYSRQARQDNYPARSVYKLKEMDRRFSLLRPGQKVLDLGASPGSWCSFAAQKVQS 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
V + + V F + D ++ ++ DLVLSDMA T G +
Sbjct: 62 RGFVLAVDLKEP-TLSFPQHVVFIQGDIINDNAAREQV-RDFAPFDLVLSDMAPKTTGIK 119
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D R+ L A A EML GG +VK F+G ++ +K F++V H KP +S
Sbjct: 120 ITDQARSHELAREAFDLAREMLGPGGSMVVKIFEGPDVQELGREMKACFKRVKHFKPKSS 179
Query: 212 RAESVEMFLLAKGF 225
RAES E+FL+
Sbjct: 180 RAESKEIFLVGMEL 193
>gi|167388553|ref|XP_001738607.1| ribosomal RNA methyltransferase [Entamoeba dispar SAW760]
gi|165898080|gb|EDR25052.1| ribosomal RNA methyltransferase, putative [Entamoeba dispar SAW760]
Length = 829
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 4/195 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y A+ G+RARSA+KL+Q+N+++ L S ++DL ++PG W QVA +
Sbjct: 9 KERLDKYYHLAKQYGYRARSAFKLVQMNKRYDFLSSAHILIDLCAAPGGWCQVATKEMPV 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGH 150
+++ +D+ + PI + D + +++ + G D+VL D +
Sbjct: 69 E---SKIFGVDLEPILPIPRCTTYVGDITTGMCFAEMKKLMKGEHADVVLHDGSPNMGKS 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D LC AA FA+ L GG F+ K F+ IL + +K F+ VI KP A
Sbjct: 126 WIQDAYTQSELCIAALKFAVTFLKKGGWFISKVFRSQDYYAILFVFEKFFKSVIATKPPA 185
Query: 211 SRAESVEMFLLAKGF 225
SR S E++L+ K F
Sbjct: 186 SRNTSAEVYLVCKDF 200
>gi|302659743|ref|XP_003021559.1| hypothetical protein TRV_04406 [Trichophyton verrucosum HKI 0517]
gi|291185462|gb|EFE40941.1| hypothetical protein TRV_04406 [Trichophyton verrucosum HKI 0517]
Length = 309
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+ ++E+ + S RR+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNT------------------------RVVAIDILDMEPILGVKF 114
GSWSQV +R+ + ++V++D+ M P+ G+
Sbjct: 58 GSWSQVLSRVLIRGESFGRRQYELDRGGTGGVAEEVRPRRDVKIVSVDLQPMAPLEGITT 117
Query: 115 FKFDFLDLDSW-----EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
+ D + + DLVLSD A G +D L AA A
Sbjct: 118 LQADITHPSTVPLLLNALNDEGEEEKVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLA 177
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ GG F+ K F+G + + LK F +V+ KP +SRA S+E F++ + ++
Sbjct: 178 MGIIRPGGTFVAKIFRGRDVDVLYAQLKSVFGRVVVAKPRSSRASSLEAFVVCRDYK 234
>gi|308804277|ref|XP_003079451.1| FtsJ-like methyltransferase family protein (ISS) [Ostreococcus
tauri]
gi|116057906|emb|CAL54109.1| FtsJ-like methyltransferase family protein (ISS) [Ostreococcus
tauri]
Length = 328
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y ++A+ EGWRARSA+KLLQI+E I + + VDL ++PGSWSQ
Sbjct: 22 KSSKD-----KRDIYYRKAKEEGWRARSAFKLLQIDESFDIFRGVKHAVDLCAAPGSWSQ 76
Query: 84 VAARITG--------SNANNTRVVAIDILDMEPILGVKFFKFDFLD-LDSWEFIRQAIGG 134
V +R S + ++VAID+ M PI GV + D E + G
Sbjct: 77 VLSRKLYLPAVRAGVSESELPKIVAIDLQPMAPIEGVTTIQGDITSLDKVLEVLSHFDGK 136
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
DL++ D A G +D L A A +L GG F+ K F+G + +
Sbjct: 137 QADLIVGDGAPDVTGLHDLDEFMQAQLILAGLTVATHILKPGGTFIAKIFRGKDVSLLYS 196
Query: 195 LLKKHFQKVIHVKPVASRAES 215
LK F V KP +SR S
Sbjct: 197 QLKIFFPDVTCAKPKSSRNSS 217
>gi|242010550|ref|XP_002426028.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
gi|212510038|gb|EEB13290.1| ribosomal RNA methyltransferase, putative [Pediculus humanus
corporis]
Length = 839
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ + D Y + A+ G+R+R+A+KLLQ+N K L+S++ ++DL ++PG W QVA +
Sbjct: 7 IGKQRKDRYYKLAKETGFRSRAAFKLLQLNRKFGFLESSKVLIDLCAAPGGWMQVAKQNM 66
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTI 148
+ + +V +D+ ++PI G D + D+VL D A
Sbjct: 67 PVS---SVIVGVDLFPIKPIPGCISLVEDITTSKCKSSLTKALQTWKADVVLHDGAPNVG 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
+ D + + L +A E L GG F+ K F+ N +L + K+ F+KV KP
Sbjct: 124 TNWIHDAYQQVCLTLSALKLGTEFLREGGWFITKVFRSSDYNSLLWVFKQLFKKVQATKP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR+ES E+F+ K F
Sbjct: 184 QASRSESAEIFVACKHF 200
>gi|326475211|gb|EGD99220.1| tRNA methyltransferase [Trichophyton tonsurans CBS 112818]
Length = 309
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+ ++E+ + S RR+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNT------------------------RVVAIDILDMEPILGVKF 114
GSWSQV +R+ + ++V++D+ M P+ G+
Sbjct: 58 GSWSQVLSRVLIRGESFGRRQYELDRGGAGNVAEEVRPRRDVKIVSVDLQPMAPLEGITT 117
Query: 115 FKFDFLDLDSW-----EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
+ D + + DLVLSD A G +D L AA A
Sbjct: 118 LQADITHPSTVPLLLNALNDEGEEEKVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLA 177
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +L GG F+ K F+G + + LK F +V+ KP +SRA S+E F++ + ++
Sbjct: 178 MGILRPGGTFVAKIFRGRDVDVLYAQLKSVFGRVVVAKPRSSRASSLEAFVVCRDYK 234
>gi|302510170|ref|XP_003017045.1| hypothetical protein ARB_05339 [Arthroderma benhamiae CBS 112371]
gi|291180615|gb|EFE36400.1| hypothetical protein ARB_05339 [Arthroderma benhamiae CBS 112371]
Length = 309
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+ ++E+ + S RR+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNT------------------------RVVAIDILDMEPILGVKF 114
GSWSQV +R+ + ++V++D+ M P+ G+
Sbjct: 58 GSWSQVLSRVLIRGESFGRRQYELDRGGTGDVAEEVRPRRDVKIVSVDLQPMAPLEGITT 117
Query: 115 FKFDFLDLDSW-----EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
+ D + + DLVLSD A G +D L AA A
Sbjct: 118 LQADITHPSTVPLLLNALNDEGEEEKVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLA 177
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +L GG F+ K F+G + + LK F +V+ KP +SRA S+E F++ + ++
Sbjct: 178 MGILRPGGTFVAKIFRGRDVDVLYAQLKSVFGRVVVAKPRSSRASSLEAFVVCRDYK 234
>gi|126179410|ref|YP_001047375.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanoculleus
marisnigri JR1]
gi|158513234|sp|A3CVJ3|RLME_METMJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|125862204|gb|ABN57393.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanoculleus marisnigri
JR1]
Length = 203
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 68/192 (35%), Positives = 109/192 (56%), Gaps = 5/192 (2%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D ++A G+RAR+AYKLL+I +++ I++ + +VDLG++PGSW QV +T
Sbjct: 7 KDSVYRKAMKAGYRARAAYKLLEIQQRNGIIRPDDNVVDLGAAPGSWLQVLRDLT----- 61
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ RV+ +D+ + P+ GV DF D E IR+ GG +V+SD + G + D
Sbjct: 62 DGRVIGVDLNPIAPMEGVTTIVGDFTDPLVQERIREEAGGVVSVVVSDASPKLSGQKSYD 121
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R + L E A FA +L GG+ ++K+FQG +++ +KHF V + ASR
Sbjct: 122 QARAIGLGEDALAFACTVLKPGGNMVIKSFQGELFGELIAETRKHFYSVRGYRTKASRKG 181
Query: 215 SVEMFLLAKGFR 226
S E +++AK F+
Sbjct: 182 SAETYIIAKNFK 193
>gi|85014301|ref|XP_955646.1| ribosomal RNA methyltransferase [Encephalitozoon cuniculi GB-M1]
gi|19171340|emb|CAD27065.1| putative RIBOSOMAL RNA METHYLTRANSFERASE [Encephalitozoon cuniculi
GB-M1]
Length = 237
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 99/195 (50%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y + A+ +RARS YKL+ I+E+H I + +VDL ++PGSWSQ A+
Sbjct: 4 EEKRDVYYRLAKKNKYRARSVYKLMHIDEEHDIFRDVEGVVDLCAAPGSWSQYASEKLLK 63
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
R+V++DI D+ PI GV K D E I + +G DLV+ D A G
Sbjct: 64 RNRGARIVSVDIQDIVPIEGVMCIKDDITSASCLEKILEVLGRPADLVICDGAPDITGIH 123
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
+ID + L ++A +L + G F+ K +G T I +K + V +KP AS
Sbjct: 124 EIDEYLQIELLKSALATSLRVSRPGSSFVGKYLRGECTPYIAGHFRKFYGGVTLLKPKAS 183
Query: 212 RAESVEMFLLAKGFR 226
R +S+E FL G +
Sbjct: 184 RTDSMECFLYCTGMK 198
>gi|224103395|ref|XP_002313039.1| predicted protein [Populus trichocarpa]
gi|222849447|gb|EEE86994.1| predicted protein [Populus trichocarpa]
Length = 840
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 7/199 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D + + A+ G+R+R+++KL+Q++ K + LQS+R ++DL ++PG W QVA +
Sbjct: 7 KHRLDKFYKLAKEHGYRSRASWKLIQLDTKFKFLQSSRAVLDLCAAPGGWMQVAVQRVPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN----PDLVLSDMAYPT 147
+ V+ ID++ + P+ G + D + I++ +G + DLVL D +
Sbjct: 67 ---RSLVLGIDLVKIAPLRGAVSIEQDITKPECRAKIKKIMGEHGVRAFDLVLHDGSPNI 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + + SL + A + L G F+ K F+ + ++ L + F+KV K
Sbjct: 124 GGAWSQEAMAQNSLVIDSVRLATQFLAPKGTFVTKVFRSQDYSSVIYCLNQLFEKVEVDK 183
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASR+ S E+F+L ++
Sbjct: 184 PAASRSASAEIFVLGLRYK 202
>gi|156847842|ref|XP_001646804.1| hypothetical protein Kpol_2002p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156117485|gb|EDO18946.1| hypothetical protein Kpol_2002p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 844
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL ++P
Sbjct: 3 KTQKKNSKGRL-----DKYYYLAKEKGYRARSSFKVIQINEKYGHFLEKSKVVIDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA+++ N + ++ +DI+ M+P+ V F+ D D +R + D
Sbjct: 58 GSWCQVASKLCPVN---SLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L +GG F+ K F+ N ++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLIWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F KV KP ASR S E+F++ K F+
Sbjct: 175 QLFDKVEATKPPASRNVSAEIFVVCKNFK 203
>gi|102139739|gb|ABF69946.1| FtsJ-like methyltransferase family protein [Musa acuminata]
Length = 847
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 7/199 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + A+ +G+R+R+A+KLLQ++ K++ L S R I+DL ++PG W QVA R
Sbjct: 7 KQRQDKFYYLAKEQGYRSRAAFKLLQLDAKYRFLPSARSILDLCAAPGGWLQVAVRHAPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI----GGNPDLVLSDMAYPT 147
+ V+ +D+ + P+ G D I++ + D+VL D +
Sbjct: 67 G---SFVIGVDLFPIRPVRGAHALVEDITTPRCRAAIKRLMDSNGCSAFDVVLHDGSPNV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + SL + A L G F+ K F+ + I+ LK+ F+KV K
Sbjct: 124 GGAWAQEATSQSSLVVDSVRLATNFLAPKGTFVTKVFRSQDYSAIIYCLKQLFEKVEVTK 183
Query: 208 PVASRAESVEMFLLAKGFR 226
PVASR+ S E++++ ++
Sbjct: 184 PVASRSTSAEIYVIGLRYK 202
>gi|50304545|ref|XP_452227.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|73621940|sp|Q6CV12|SPB1_KLULA RecName: Full=AdoMet-dependent rRNA methyltransferase SPB1;
AltName: Full=2'-O-ribose RNA methyltransferase;
AltName: Full=S-adenosyl-L-methionine-dependent
methyltransferase
gi|49641360|emb|CAH01078.1| KLLA0C00737p [Kluyveromyces lactis]
Length = 833
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 65/212 (30%), Positives = 112/212 (52%), Gaps = 10/212 (4%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLG 75
+ ++ + +S+ L D Y A+ +G+RARS++K++QINEK+ L+ ++ ++DL
Sbjct: 1 MGKKTQKKNSKGRL-----DKYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLC 55
Query: 76 SSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-G 134
++PGSW QVA+ + N + ++ +DI+ M+ + V F+ D D +R +
Sbjct: 56 AAPGSWCQVASNLCPVN---SLIIGVDIVPMKTMPNVITFQSDITTEDCRSKLRGYMKTW 112
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D VL D A D L A A+E L +GG F+ K F+ N ++
Sbjct: 113 KADTVLHDGAPNVGLSWAQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLIW 172
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ F+KV KP ASR S E+F++ K F+
Sbjct: 173 VFQQLFEKVEATKPPASRNVSAEIFVVCKNFK 204
>gi|330926680|ref|XP_003301563.1| hypothetical protein PTT_13095 [Pyrenophora teres f. teres 0-1]
gi|311323564|gb|EFQ90356.1| hypothetical protein PTT_13095 [Pyrenophora teres f. teres 0-1]
Length = 386
Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats.
Identities = 77/260 (29%), Positives = 109/260 (41%), Gaps = 63/260 (24%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ EGWRARSAYKLLQ++E+ + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEEGWRARSAYKLLQLDEEFNLFDGVTRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNTR-------------------------------------------VVA 100
V +R+ R +VA
Sbjct: 58 VLSRVLIKGEIFGRGGWQEKQAAMRNQVLGLDNKGSMTEKREDAEVKEAAKPREGVRIVA 117
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQA---------------IGGNPDLVLSDMAY 145
ID+ M P+ GV + D + + A DLV+SD A
Sbjct: 118 IDLQPMSPLEGVTTMRADITHPSTIPLLLAALDPSPTSSTPSANTPTTSPVDLVISDGAP 177
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
G +D L AA AL +L GG F+ K F+G + + LK F++V
Sbjct: 178 DVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLLFAQLKIVFERVRV 237
Query: 206 VKPVASRAESVEMFLLAKGF 225
KP +SRA S+E F++ +GF
Sbjct: 238 AKPRSSRASSIEAFVVCEGF 257
>gi|328876585|gb|EGG24948.1| rRNA methyltransferase [Dictyostelium fasciculatum]
Length = 873
Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ QK K L + D + A+ +G+R+R+A+KL+Q+N+K+ L S + +
Sbjct: 1 MGQKKKK----------LAKGRLDKFYYLAKEQGFRSRAAFKLIQLNKKYNFLGSAKACL 50
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA- 131
DL ++PG W QVA++ + + +V +D+ + PI + D I++A
Sbjct: 51 DLCAAPGGWMQVASKYMPA---QSVIVGVDLDPIRPIRNCIGLQEDITTAKCRAEIKKAL 107
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+ L D A D + L A A E L GG F+ K F+G N
Sbjct: 108 KTWKVDICLHDGAPNMGTSWIQDAFQQAELTLHALKLATEFLTAGGWFVTKVFRGPDYNS 167
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ + + F+KV KP ASR S E+F++ +GF
Sbjct: 168 LMWVFHQLFKKVDSTKPQASRNASAEIFVVCQGF 201
>gi|303283660|ref|XP_003061121.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457472|gb|EEH54771.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 197
Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + A+ +G+R+R+A+KL+Q+N K+ R +DL ++PG W QVA + +
Sbjct: 1 DKFYYLAKEQGFRSRAAFKLVQLNRKYDFFSGARACMDLCAAPGGWLQVAVKYMP---MS 57
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG--NPDLVLSDMAYPTIGHRKI 153
+ +V +D+ ++ I G F D +++ D+V+ D A G+
Sbjct: 58 STIVGVDLAPIKAIRGCTTFVDDITTQSCRAQLKRVTPDGVKYDVVMHDGAPNVGGNFAA 117
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
+ +L + A E L GG F+ K F+ + +L +++ F+KV KPVASR
Sbjct: 118 ESYTQAALTLDSLRLATEFLREGGWFVTKVFRSTEYHALLYSMQQLFKKVESTKPVASRG 177
Query: 214 ESVEMFLLAKGF 225
S E++++ G+
Sbjct: 178 TSAEIYVVCIGY 189
>gi|256079102|ref|XP_002575829.1| ribosomal RNA methyltransferase [Schistosoma mansoni]
gi|238661080|emb|CAZ32064.1| ribosomal RNA methyltransferase, putative [Schistosoma mansoni]
Length = 885
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +K+K D + A+ G+R+R+A+KL+Q+N + + L S++ ++
Sbjct: 1 MGKKIKTGKA-----------RKDKFYFLAKETGFRSRAAFKLIQLNRRFKFLNSSKVLI 49
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQA 131
DL ++PG W QVAA+ + ++ +D++ + PI VK F D + +
Sbjct: 50 DLCAAPGGWLQVAAK---EMPMTSHIIGVDLVPIHPIPKVKTFVADITTDKCKQILRSEL 106
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+VL D A ID L + A E L GG F+ K F+
Sbjct: 107 NDLKADVVLHDGAPNVGAAWSIDEYTQAVLSLNSFAIATEFLRRGGWFVTKVFRSRDYEP 166
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ +L + F+ V +KP ASR ES E+FL+ + +
Sbjct: 167 LKWVLSQFFRTVRAIKPEASRLESAEIFLVGQNY 200
>gi|218780797|ref|YP_002432115.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfatibacillum
alkenivorans AK-01]
gi|254809549|sp|B8FL12|RLME_DESAA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|218762181|gb|ACL04647.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfatibacillum
alkenivorans AK-01]
Length = 207
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 63/208 (30%), Positives = 112/208 (53%), Gaps = 8/208 (3%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
+S + W D Y +AQ G+ ARS +KL ++ ++ +IL+ ++++DLG +P
Sbjct: 1 MKSKKKGKNLW-----RDHYTDKAQKAGFPARSVFKLEEMQKRWKILRPGQKVLDLGCAP 55
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL 138
GSW + A++I G + + +D +F + D +L + IG + D+
Sbjct: 56 GSWLKYASQIVGDSGRVIGLDLK-PMDQPDKPNAQFIQGDAFELT--QEFLDEIGRDFDV 112
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VLSDMA T G + +D L++ +LCE+A A+ +L GG F+ K FQG + + +KK
Sbjct: 113 VLSDMAPNTTGIKNVDALKSAALCESALAAAVTVLKPGGSFVCKIFQGEGFDAFIKDVKK 172
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
+F K KP ++R +S E++++ +
Sbjct: 173 YFTKHKIFKPESTRKQSREIYVVGWSKK 200
>gi|10954014|gb|AAG25705.1| SPB1-like protein [Saccharomyces servazzii]
Length = 842
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 10/209 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSP 78
++ + +S+ L D Y+ A+ +G+RARS++K++QINEK L+ ++ +VDL ++P
Sbjct: 3 KTQKKNSKGRL-----DRYLYLAKEKGYRARSSFKIIQINEKFGHFLEKSKVVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-GNPD 137
GSW QVA ++ N + ++ +DI+ M+P+ V F+ D D +R + D
Sbjct: 58 GSWCQVATKLCPVN---SLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKAD 114
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
VL D A D L A A+E L + G F+ K F+ N ++ + +
Sbjct: 115 TVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQ 174
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F KV KP +SR S E+F++ KGF+
Sbjct: 175 QLFDKVEATKPPSSRNVSAEIFVVCKGFK 203
>gi|302407548|ref|XP_003001609.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Verticillium
albo-atrum VaMs.102]
gi|261359330|gb|EEY21758.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Verticillium
albo-atrum VaMs.102]
Length = 398
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 56/252 (22%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ +GWRARSA+KLLQ++E+ + R+VDL ++PGSWSQV +R+
Sbjct: 5 SKDKRDAYYRLAKEQGWRARSAFKLLQLDEEFDLFHGVTRVVDLCAAPGSWSQVLSRVLI 64
Query: 91 SNANNT-------------------------------------------RVVAIDILDME 107
++V+ID+ +
Sbjct: 65 KGEKFGRTAWQDREASFRQQMLKIFPSGASDTDQPMTTPASATSPRDDVKIVSIDLQPIS 124
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDL-------------VLSDMAYPTIGHRKID 154
P+ GV + D + + +A+ + D V+SD A G +D
Sbjct: 125 PLPGVVTLRADITHPATVPLLLKALDPDYDATSQSKNAAHPVDLVISDGAPDVTGLHDLD 184
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA AL +L GG F+ K F+G + + LK F+KVI KP +SRA
Sbjct: 185 IYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQLKVFFEKVIVAKPRSSRAS 244
Query: 215 SVEMFLLAKGFR 226
SVE F++ F+
Sbjct: 245 SVEAFIVCINFQ 256
>gi|262199868|ref|YP_003271077.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Haliangium ochraceum DSM
14365]
gi|262083215|gb|ACY19184.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Haliangium ochraceum DSM
14365]
Length = 199
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 66/201 (32%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
S+ R+ +D Y QRA+ G+ AR+ +KL +I++K + + R++DLG +PGSW Q
Sbjct: 2 SKLSDRRNRHDVYHQRARKRGFLARAVFKLEEIDDKLDLFRRGDRVLDLGCAPGSWLQYC 61
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
G + I G + D + Q D+VLSDMA
Sbjct: 62 RTRVGPTGELVGIDR--GPLDAEIPGARLLSGDVFE--VAPETLQGPLEAFDVVLSDMAP 117
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
T G R +D R+ SL E A A +L GG+F+ K FQG +D++ ++ F V
Sbjct: 118 DTTGIRHLDQARSESLFERALDIADAVLAPGGNFVGKLFQGPAFSDLVKRCRRDFDAVKI 177
Query: 206 VKPVASRAESVEMFLLAKGFR 226
VKP SR S+E +++A+G R
Sbjct: 178 VKPKGSRQRSIEQYVVARGRR 198
>gi|168007294|ref|XP_001756343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692382|gb|EDQ78739.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 844
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + A+ +G+R+R+++KL+Q++ K Q L S R ++DL ++PG W QV ++
Sbjct: 13 DRFYYLAKEQGFRSRASFKLVQLDRKFQFLSSARSVLDLCAAPGGWMQVCSKNMPVG--- 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR----QAIGGNPDLVLSDMAYPTIGHR 151
+ ++ ID++ + PI G + D I+ + +VL D + G
Sbjct: 70 SLIIGIDLVPIRPIRGCVTLQEDITTPQCRAAIKKVLKEKKHDMVQVVLHDGSPNVGGAW 129
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
+ +L + A ++L GG F+ K F+ N +L K+ F+KV KP+AS
Sbjct: 130 SSESSAQTALVLDSLKLATDVLCPGGTFVTKIFRSQDYNALLFAFKQLFEKVEVTKPIAS 189
Query: 212 RAESVEMFLLAKGFR 226
RA S E++++ + +R
Sbjct: 190 RATSAEIYVICQKYR 204
>gi|324523982|gb|ADY48339.1| Ribosomal RNA methyltransferase [Ascaris suum]
Length = 248
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 8/224 (3%)
Query: 11 RGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR 70
R K + + ++ R + D +V +A+ +RARSA+KL++IN +++ +
Sbjct: 25 RRFANNTKTAKKRAVTTKYIRRQLRDEFVLKAREHSYRARSAFKLIEINNRYKFINRGAV 84
Query: 71 IVDLGSSPGSWSQVAARIT-GSNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFI 128
+VD+GS+PGSW QV A + + + V+ ID+ M P+ GV D ++ I
Sbjct: 85 VVDVGSAPGSWCQVIAELVHKEHHKDAYVLGIDLQPMVPLAGVDLITMADITSPETHRRI 144
Query: 129 RQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML-----NIGGDFLVK 182
+Q + G D V+SDMA G + +DH R ++LCE F GG FL K
Sbjct: 145 KQYLSGRSVDAVVSDMAPNPSGDKTVDHERIIALCEQLLSFCCGNAAVIPLKKGGTFLCK 204
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ G ++ LK +F V ++KP ASR S E++LLA +
Sbjct: 205 IWDGQRRLQLIESLKGYFHIVHNIKPDASRDHSAELYLLAMKRK 248
>gi|308812406|ref|XP_003083510.1| Putative SAM-dependent rRNA methyltransferase SPB1 (ISS)
[Ostreococcus tauri]
gi|116055391|emb|CAL58059.1| Putative SAM-dependent rRNA methyltransferase SPB1 (ISS)
[Ostreococcus tauri]
Length = 948
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 5/196 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D Y A+ +G+R+R+A+KL+Q+N K+ L R +DL ++PG W QVA +
Sbjct: 8 KHRLDKYYYLAKEQGFRSRAAFKLVQLNRKYDFLSKARACMDLCAAPGGWLQVAQKYMPM 67
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG--NPDLVLSDMAYPTIG 149
N + +V +D+ + PI GV F D +R+A D+V+ D A G
Sbjct: 68 N---SLIVGVDLAPIRPIRGVTTFVEDITTQSCRAALRRATPKGTQYDVVIHDGAPNVGG 124
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+ + +L + A E L GG F+ K F+ + +L ++ F+KV KPV
Sbjct: 125 NFAKESYTQAALTLDSLRLATEFLGQGGWFVTKVFRSVEYHALLYACRQLFKKVESTKPV 184
Query: 210 ASRAESVEMFLLAKGF 225
ASR S E++++ G+
Sbjct: 185 ASRGTSAEIYVVCSGY 200
>gi|288932082|ref|YP_003436142.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ferroglobus placidus DSM
10642]
gi|288894330|gb|ADC65867.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ferroglobus placidus DSM
10642]
Length = 197
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 110/194 (56%), Gaps = 7/194 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y +A+ EG+R+R+AYKL QIN K +I++ ++DLG+SPG WSQVA +
Sbjct: 2 KDRQDYYYWKAKKEGYRSRAAYKLKQINAKFEIIKKGYHVLDLGASPGGWSQVAVEL--- 58
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
VVA+D+ M+PI GV F K D ++ E IR+ D+VL D + G
Sbjct: 59 ---GADVVAVDLNPMKPIEGVVFIKGDITKEETKEEIRKIRDK-FDVVLCDASPKITGKW 114
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
+DH +M L +AA A E L GG+F+VK FQG +++ KK+F+ P AS
Sbjct: 115 DLDHFLSMELAKAAFDIAKEFLKPGGNFVVKLFQGAELEEVVREFKKYFRFKKLHAPPAS 174
Query: 212 RAESVEMFLLAKGF 225
R S E++ + KGF
Sbjct: 175 RKRSAEIYFIGKGF 188
>gi|51246761|ref|YP_066645.1| ribosomal RNA methyltransferase (FtsJ) [Desulfotalea psychrophila
LSv54]
gi|81641141|sp|Q6AJ42|RLME_DESPS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|50877798|emb|CAG37638.1| related to ribosomal RNA methyltransferase (FtsJ) [Desulfotalea
psychrophila LSv54]
Length = 201
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 3/198 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
R IND Y ++A+ + + ARS YKL + +K+ I+ I+DLG PGSWS A+ + G
Sbjct: 2 RKINDYYAKKAKKDNYPARSIYKLEEAQKKYDIISRGDSILDLGCFPGSWSIYASELAGP 61
Query: 92 NANNTRVVAIDILDMEPIL--GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
V + + + D + E +R+ +++SDMA T G
Sbjct: 62 KGIVVGVDLQQAVGGGRADAAPIHWICEDIREPAMLEAVRRIRPS-FRVLISDMAPKTTG 120
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+R D ++++LC A ++L G+++ K FQGG D + +KK F+ +KP
Sbjct: 121 NRWTDAQQSLNLCYQTLEIAEQVLLNKGNYICKVFQGGDFPDFVDAVKKRFESARVIKPQ 180
Query: 210 ASRAESVEMFLLAKGFRK 227
+SR ES E+F+L +RK
Sbjct: 181 SSRIESREVFVLGLNYRK 198
>gi|108757449|ref|YP_631182.1| ribosomal RNA large subunit methyltransferase J [Myxococcus xanthus
DK 1622]
gi|123247821|sp|Q1D841|RLME_MYXXD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|108461329|gb|ABF86514.1| ribosomal RNA large subunit methyltransferase J [Myxococcus xanthus
DK 1622]
Length = 213
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y Q+A+ EG RARSA+K+ ++ ++ +++ ++DLG++PG + Q+ A G
Sbjct: 15 KDHYFQKAKQEGLRARSAFKVDELIKRFPMVKKGHVVLDLGAAPGGFLQILADAVGPKGR 74
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V + I V+ D L D + + G D V+SDMA T G + D
Sbjct: 75 VIGVDIVAIRPFSQ-PFVQTAVLDVLADDFDAKLTELHAGPFDAVISDMAPKTSGIKATD 133
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ L A A G F+ K F G D ++ F++V V+P A+R
Sbjct: 134 EARSLRLAGKALELAAARGRPGSSFVAKVFMGRDFEDFRNQIRALFEEVKVVRPEATRGA 193
Query: 215 SVEMFLLAKGFR 226
S+E++L+ R
Sbjct: 194 SMEVYLVGLRRR 205
>gi|94986714|ref|YP_594647.1| 23S rRNA methylase [Lawsonia intracellularis PHE/MN1-00]
gi|143460425|sp|Q1MRQ0|RLME_LAWIP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|94730963|emb|CAJ54326.1| 23S rRNA methylase [Lawsonia intracellularis PHE/MN1-00]
Length = 200
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 1/193 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y +A+ E + ARS YKL +I+ + + Q ++DLG+SPGSWS AA G
Sbjct: 5 RDYYFLKAKHEKYPARSIYKLKEIDNRFCLFQKGMSVLDLGASPGSWSLGAAEKVGKTGR 64
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
I + + V FF+ D G +++SDMA T G + D
Sbjct: 65 VVSCD-IQTITIPLPSNVSFFQEDIFHRSDSFNNILIKEGPFHVIMSDMAPQTTGVKITD 123
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
H R++ LC A A L G F+VK F G T +++ +++HF++V KP +SR +
Sbjct: 124 HSRSLELCLEALAIAKCYLLQQGSFIVKIFMGADTIELVKEMRQHFERVTSFKPCSSRTK 183
Query: 215 SVEMFLLAKGFRK 227
S E+F + GF++
Sbjct: 184 SKEIFYVGLGFKR 196
>gi|86157470|ref|YP_464255.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaeromyxobacter
dehalogenans 2CP-C]
gi|123499845|sp|Q2IPT3|RLME_ANADE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|85773981|gb|ABC80818.1| 23S rRNA Um-2552 2'-O-methyltransferase [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 267
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y ++A+ +G RARSA+K+ +I +H++L ++DLG++PG + Q+ A G
Sbjct: 8 KDFYYRKAKKQGLRARSAFKIEEILHRHRLLGRGDAVLDLGAAPGGFLQILAEAVGEKGV 67
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V ++ + V+ D L D+ + IR G LV SDMA TIG + D
Sbjct: 68 AVGVD-LEPIRNLGKRWVRTAIVDLLAPDALDKIRLLHDGRFRLVTSDMAPKTIGIKVTD 126
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ L A A ++L GG F+ K F GG + L+ F + ++P A R
Sbjct: 127 EARSLELVRMALSVAEQVLVPGGAFVAKVFMGGDFPALKRELQGRFAAMHVIRPEAVRES 186
Query: 215 SVEMFLLAKGFR 226
S E+++L GFR
Sbjct: 187 SYEVYVLGTGFR 198
>gi|197121510|ref|YP_002133461.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaeromyxobacter sp. K]
gi|196171359|gb|ACG72332.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaeromyxobacter sp. K]
Length = 318
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y ++A+ +G RARSA+K+ +I +H++L ++DLG++PG + Q+ A G
Sbjct: 8 KDFYYRKAKKQGLRARSAFKIEEILHRHRLLGRGDAVLDLGAAPGGFLQILADAVGEKGV 67
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V ++ + V+ D L D+ + IR G LV SDMA TIG + D
Sbjct: 68 AVGVD-LEPIRNLGKRWVRTAVVDLLAPDALDKIRLLHEGRFRLVTSDMAPKTIGIKVTD 126
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ L A A ++L GG F+ K F GG + L+ F + ++P A R
Sbjct: 127 EARSLELVRMALSVAEQVLVPGGAFVAKVFMGGDFPALKRELQGRFAAMHVIRPEAVRES 186
Query: 215 SVEMFLLAKGFR 226
S E+++L GFR
Sbjct: 187 SYEVYVLGTGFR 198
>gi|315040654|ref|XP_003169704.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Arthroderma gypseum
CBS 118893]
gi|311345666|gb|EFR04869.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Arthroderma gypseum
CBS 118893]
Length = 316
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 46/244 (18%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+ ++E+ + S RR+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIHLDEEFDLFAHSNPDSVRRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNT-------------------------------RVVAIDILDME 107
GSWSQV +R+ + ++V++D+ M
Sbjct: 58 GSWSQVLSRVLIRGESFGRRQYELDRGRGGAGESAAGDAGEDVRPRRDVKIVSVDLQPMA 117
Query: 108 PILGVKFFKFDFLDLDSW-----EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
P+ G+ + D + + DLVLSD A G +D L
Sbjct: 118 PLEGITTLQADITHPSTAPLLLNALNDEGEEEKVDLVLSDGAPDVTGLHDLDIYVQSQLL 177
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
AA A+ +L GG F+ K F+G + + LK F +V+ KP +SRA S+E F++
Sbjct: 178 YAALNLAMGILRPGGTFVAKIFRGRDVDVLYAQLKSVFGRVVVAKPRSSRASSLEAFVVC 237
Query: 223 KGFR 226
+ ++
Sbjct: 238 RDYK 241
>gi|308464733|ref|XP_003094631.1| hypothetical protein CRE_31467 [Caenorhabditis remanei]
gi|308247098|gb|EFO91050.1| hypothetical protein CRE_31467 [Caenorhabditis remanei]
Length = 227
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
+ +G+ ++ R +D + +A+ +RARSA+KL++I+EK + L+ ++D+G +P
Sbjct: 18 TKKAKGNLNRYIQRQSSDEFAVKAREHNYRARSAFKLMEIDEKFKFLKPESTVIDIGCAP 77
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD--FLDLDSWEFIRQAIGGNP 136
GSW QV + V+ +D+ ++ PI G + + +
Sbjct: 78 GSWIQVVVEKCPN----GYVLGVDLQNVLPIRGAEILSQSDVTSPEVHLKIREKLKNRQL 133
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAAT----FFALEMLNIGGDFLVKTFQGGTTNDI 192
D+VLSDMA G DHLR + LC L G FL K + G D
Sbjct: 134 DVVLSDMAPNPTGDNATDHLRLIELCRTVFRLFSEENCIELKRNGVFLCKIWDGAARGDF 193
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ L + F V VKP A R S EM+L +GF+
Sbjct: 194 IRELSERFATVKTVKPTACRDNSAEMYLFCRGFK 227
>gi|220916277|ref|YP_002491581.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219954131|gb|ACL64515.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 298
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y ++A+ +G RARSA+K+ +I +H++L ++DLG++PG + Q+ A G
Sbjct: 8 KDFYYRKAKKQGLRARSAFKIEEILHRHRLLGRGDAVLDLGAAPGGFLQILADAVGEKGV 67
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V ++ + V+ D L D+ + IR G LV SDMA TIG + D
Sbjct: 68 AVGVD-LEPIRNLGKRWVRTAVVDLLAPDALDKIRLLHEGRFRLVTSDMAPKTIGIKVTD 126
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ L A A ++L GG F+ K F GG + L+ F + ++P A R
Sbjct: 127 EARSLELVRMALSVAEQVLVPGGAFVAKVFMGGDFPALKRELQGRFAAMHVIRPEAVRES 186
Query: 215 SVEMFLLAKGFR 226
S E+++L GFR
Sbjct: 187 SYEVYVLGTGFR 198
>gi|302895811|ref|XP_003046786.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727713|gb|EEU41073.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 73/261 (27%), Positives = 109/261 (41%), Gaps = 63/261 (24%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KLLQ++E+ + + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEEFDLFSNVTRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT---------------------------------------------RV 98
V +R+ ++
Sbjct: 58 VLSRVLIKGEKFGRAAWQDKEAKFRQQMLGILPKDDEAIITEQDGEKQEEALKPRDDVKI 117
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIR-------------QAIGGNPDLVLSDMAY 145
V+ID+ + P+ G+ + D + + DLVLSD A
Sbjct: 118 VSIDLQPISPLAGITTLRADITHPATVPLLLSALDPSYDAKTAGNQASHPVDLVLSDGAP 177
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
G +D L AA AL +L GG F+ K F+G + + LK F+KVI
Sbjct: 178 DVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQLKIFFEKVIV 237
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP +SRA SVE F++ F+
Sbjct: 238 AKPRSSRASSVEAFIVCINFQ 258
>gi|257052864|ref|YP_003130697.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halorhabdus utahensis
DSM 12940]
gi|256691627|gb|ACV11964.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halorhabdus utahensis
DSM 12940]
Length = 256
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 74/190 (38%), Positives = 107/190 (56%), Gaps = 2/190 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y RA+ +G+RARSA+KL Q++E +L + R +VDLG++PG W QVAA G
Sbjct: 4 KDKYYNRAKQQGYRARSAFKLRQLDETADLLGAERTVVDLGAAPGGWLQVAAERLGDGGR 63
Query: 95 NTRVVAIDILDMEPIL-GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
V I D+E V+ + D D + E I A G +LVLSDMA G +
Sbjct: 64 VVGVDRQRIDDLEEPDVPVETIRGDITDESTVEAITDA-VGEANLVLSDMAPNVTGEYDL 122
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH R++ L A +L++L GGD +VK F G +D+ +++ F+ V V+P ASR
Sbjct: 123 DHARSVHLARQAFEVSLDVLGAGGDLVVKVFDGRDLDDLKTDIEEEFEYVREVRPDASRD 182
Query: 214 ESVEMFLLAK 223
S E++L+AK
Sbjct: 183 SSSELYLVAK 192
>gi|322710895|gb|EFZ02469.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Metarhizium anisopliae
ARSEF 23]
Length = 417
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 109/269 (40%), Gaps = 71/269 (26%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KLLQ++E+ + + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEEFNLFANVSRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT----------------------------------------------- 96
V +R+ N
Sbjct: 58 VLSRVLIKNEQFGLKSWQDGEAHLRRSMLSVLPASTTPGGTSAVEAAIAAQHAASRPRDD 117
Query: 97 -RVVAIDILDMEPILGVKFFKFDFLDLDSWEF------------------IRQAIGGNPD 137
++VAID+ + P+ G+ + D + D
Sbjct: 118 VKIVAIDLQPISPLAGITTLQADITHPATVPLLLGALDPGRDAQRAAEGAAEGKASHPVD 177
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
LVLSD A G +D L AA AL +L GG F+ K F+G + + LK
Sbjct: 178 LVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQLK 237
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+KV+ KP +SRA S+E F++ FR
Sbjct: 238 IFFEKVVVAKPRSSRASSMEAFIVCLNFR 266
>gi|66811534|ref|XP_639947.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
gi|74854041|sp|Q54NX0|RRMJ3_DICDI RecName: Full=rRNA methyltransferase 3 homolog; AltName: Full=rRNA
(uridine-2'-O-)-methyltransferase 3
gi|60466892|gb|EAL64936.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
Length = 833
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
L + D + A+ +G+R+R+A+KL+Q+N+K+ L + + +DL ++PG W QVA++
Sbjct: 8 LAKGRLDKFYYMAKEQGYRSRAAFKLIQLNKKYNFLGTAKACLDLCAAPGGWMQVASKYM 67
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
+ +V +D++ + + D E + D+ L D A
Sbjct: 68 PV---QSLIVGVDLVPIRQVRNCIGLTEDITTQKCRTEIKKALKTWKVDVCLHDGAPNMG 124
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
D + L A A E L GG F+ K F+G N ++ + K F+KV KP
Sbjct: 125 TSWVQDAYQQAELTLHALKLATEFLTTGGWFVTKVFRGSDYNSLIWVFNKLFKKVESTKP 184
Query: 209 VASRAESVEMFLLAKGF 225
+SR S E+F++ +GF
Sbjct: 185 PSSRNASAEIFVVCQGF 201
>gi|302308507|ref|NP_985433.2| AFL117Cp [Ashbya gossypii ATCC 10895]
gi|299790664|gb|AAS53257.2| AFL117Cp [Ashbya gossypii ATCC 10895]
Length = 303
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 69/271 (25%), Positives = 111/271 (40%), Gaps = 65/271 (23%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS WL+R DPY + A+++ R+R+A+KL++I+E+ ++ ++ +R++DLG +PG+W
Sbjct: 23 RFNSSGRWLSRQRRDPYTREAKVQELRSRAAFKLIEIDEQFRLFRAGQRVLDLGFAPGAW 82
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVK--------------FFKFDFLDLDSWEF 127
SQVA + T V + + ++ +F F E
Sbjct: 83 SQVAHQRTQPGGKVMGVDVLPCKPPTGVSSIQANVLSRKTHELVRLYFSRHFQLNMHDEL 142
Query: 128 IRQA------------------------------IGGNPDLVLSDMAYP----------- 146
++ D+VLSDM P
Sbjct: 143 HKKHGYFQHMLEERLEELQKDNSFQPLYGMADPVHEHPLDVVLSDMYEPWPQVTGFWNNF 202
Query: 147 ----------TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
T G DH +M LC+AA A+ +L GG F+ K + G + L
Sbjct: 203 TNAAYSRMANTSGVAVKDHYMSMDLCDAALLCAIALLRPGGSFVCKLYTGKEDQLLERRL 262
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+K F KV KP A R+ES E++ + RK
Sbjct: 263 RKVFTKVRRFKPEACRSESKELYFVGLDKRK 293
>gi|145551003|ref|XP_001461179.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429012|emb|CAK93806.1| unnamed protein product [Paramecium tetraurelia]
Length = 902
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 3/195 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
R D Y A+ +G+R+R+A+KL Q+N K+ L + R +VDL ++PG W QV A+I
Sbjct: 7 ARSRLDKYYNLAKDQGYRSRAAFKLFQLNRKYNFLNNARTVVDLCAAPGGWMQVCAQIMP 66
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
++ + ++ +D++ ++PI G K F D + +++ I D+ L D A
Sbjct: 67 TS---SIIIGLDLVHIKPIPGCKAFTQDITTPQCVQLLKKEIPQKADVFLHDGAPNVGAS 123
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L +A A + L GG F+ K F+ N ++ + K F KV KP+A
Sbjct: 124 WAKDAYNQNDLVLSALRLASQFLKKGGVFVTKVFRSTDYNSLMWVFNKFFSKVEATKPLA 183
Query: 211 SRAESVEMFLLAKGF 225
SR S E+F++ +
Sbjct: 184 SRFVSAEIFVVCLDY 198
>gi|226466768|emb|CAX69519.1| hypothetical protein [Schistosoma japonicum]
Length = 260
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIV 72
+ +K+K D + A+ G+R+R+A+KL+Q+N + + L S++ ++
Sbjct: 1 MGKKIKTGKA-----------RKDKFYYLAKETGFRSRAAFKLIQLNRRFKFLNSSKVLI 49
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQA 131
DL ++PG W QVAA+ ++++ +D++ + PI VK F D + +
Sbjct: 50 DLCAAPGGWLQVAAK---EMPIASQIIGVDLVPIHPIPKVKTFIADITTDKCKQILRNEL 106
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+VL D A ID L + A E L GG F+ K F+
Sbjct: 107 NESKADVVLHDGAPNVGAAWSIDEYSQAVLSLNSFAIATEFLRRGGWFVTKVFRSRDYEP 166
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+L + F+ V +KP ASR ES E+F++ + +
Sbjct: 167 FKWVLSQFFRTVRAIKPEASRLESAEIFIVGQFY 200
>gi|307353428|ref|YP_003894479.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanoplanus
petrolearius DSM 11571]
gi|307156661|gb|ADN36041.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanoplanus
petrolearius DSM 11571]
Length = 199
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 6/192 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y +++ EG+R+R+AYKLL I ++ I++ + IVDLG++PGSW QV +T
Sbjct: 7 KDKYYNKSRSEGYRSRAAYKLLDIQKRFGIIRDDDNIVDLGAAPGSWMQVLRDMT----- 61
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ +V +D+ + PI DF E I I ++V+ D + G + D
Sbjct: 62 SGAIVGVDLNPIAPIENTIQITGDFTTEKIQEKIISHIH-EVNVVVCDASPKLSGSKSYD 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R + L A FA +L GG+F++K+FQG +++L +++ F V + ASR
Sbjct: 121 QARAIGLNHEAFEFARRVLKPGGNFVIKSFQGEMFSELLNDIRESFYSVKVYRTTASRRG 180
Query: 215 SVEMFLLAKGFR 226
S E +++AK FR
Sbjct: 181 STETYIIAKNFR 192
>gi|255079048|ref|XP_002503104.1| predicted protein [Micromonas sp. RCC299]
gi|226518370|gb|ACO64362.1| predicted protein [Micromonas sp. RCC299]
Length = 200
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + A+ +G+R+R+++KL+Q+N K+ R +DL ++PG W QVA +
Sbjct: 2 RTDKFYYLAKEQGFRSRASFKLVQLNRKYDFFSGARACMDLCAAPGGWLQVAQKYMP--- 58
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG--NPDLVLSDMAYPTIGHR 151
++ +V +D+ ++PI G F D +R+ D+V++D A G+
Sbjct: 59 MSSLIVGVDLAPIKPIRGCTTFVDDITTQSCRAQLRRVTPEGTKYDIVMNDGAPNVGGNF 118
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
+ +L + A E L GG F+ K F+ + +L +++ F+KV KPVAS
Sbjct: 119 AAESYTQAALTLDSLRLASEFLREGGWFVTKVFRSTEYHALLYSMQQLFKKVESTKPVAS 178
Query: 212 RAESVEMFLLAKGF 225
R S E++++ G+
Sbjct: 179 RGTSAEIYVVCIGY 192
>gi|33519574|ref|NP_878406.1| cell division protein 23S rRNA methyltransferase FtsJ [Candidatus
Blochmannia floridanus]
gi|81666687|sp|Q7VQM8|RLME_BLOFL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|33517237|emb|CAD83620.1| cell division protein 23S rRNA methyltransferase FtsJ [Candidatus
Blochmannia floridanus]
Length = 206
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 65/192 (33%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y +AQ + R+RS +KL I+ ++L+ ++DLGS+PG WS + +N
Sbjct: 12 DQYALQAQNQKLRSRSWFKLQSIDRLDKLLKQGMTVIDLGSTPGGWSSYVIKQI---SNL 68
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-IRQAIGGNPDLVLSDMAYPTIGHRKID 154
+V+ DIL M+ I GVKF + D +++ + +VLSDM+ T G +D
Sbjct: 69 GTIVSCDILPMKKIAGVKFLQGDCSNINFLNEIDLKIKHKRAQVVLSDMSPNTTGISTVD 128
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
+++ L + A L GG FLVK FQG + L LK F KV KP +SR+
Sbjct: 129 VCKSIYLGKIALNMCCRFLAPGGSFLVKIFQGDGFDQYLYNLKCLFHKVKVRKPSSSRSH 188
Query: 215 SVEMFLLAKGFR 226
S E+++++K F+
Sbjct: 189 SREVYIVSKDFK 200
>gi|110669535|ref|YP_659346.1| ribosomal RNA large subunit methyltransferase J [Haloquadratum
walsbyi DSM 16790]
gi|121692027|sp|Q18E61|RLME_HALWD RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|109627282|emb|CAJ53772.1| ribosomal RNA large subunit methyltransferase J [Haloquadratum
walsbyi DSM 16790]
Length = 256
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 97/190 (51%), Gaps = 2/190 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y RA+ EG+R RSAYKL QI+ + ++DLG++PG W QVAA G +
Sbjct: 4 RDEYYNRAKQEGYRTRSAYKLQQIDADAGVFGPGNTVIDLGAAPGGWLQVAAEAVGPSGT 63
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKI 153
V I D+E + V + D D + +R+ + ++VLSDMA G +
Sbjct: 64 VIGVDFQRIRDLESDI-VDTIRGDMTDESTKNALRKRVNNSSVNVVLSDMAPNMTGEYSV 122
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH R++ L A A ++L GGDF+VK F G D + F+ V ++P ASR
Sbjct: 123 DHARSVHLARQAFSVATDILPAGGDFIVKVFDGRDLADFRQDVDTEFEYVKSIRPDASRD 182
Query: 214 ESVEMFLLAK 223
S E +L+ K
Sbjct: 183 SSSEQYLVGK 192
>gi|225428430|ref|XP_002280414.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 842
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 7/199 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D + A+ G+R+R+A+KL+Q++ K+ L+S+R ++DL ++PG W Q A
Sbjct: 7 KHRLDKFYHLAKEHGYRSRAAWKLVQLDSKYNFLRSSRAVLDLCAAPGGWMQAAVERVPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW----EFIRQAIGGNPDLVLSDMAYPT 147
+ ++ +D+ + P+ G + D + + + D+VL D +
Sbjct: 67 G---SFILGVDLNPIAPVRGAISIEEDITKPACKARVKKLMSEYGCAAFDIVLHDGSPNI 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + +L A A + L G F+ K F+ N +L LK+ F+KV K
Sbjct: 124 GGAWTQEATAQNALVIDALRLATQFLAPKGAFVTKVFRSQDYNSVLYCLKQLFEKVEVDK 183
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASR+ S E+F+L ++
Sbjct: 184 PAASRSTSAEIFVLGLKYK 202
>gi|330840582|ref|XP_003292292.1| hypothetical protein DICPUDRAFT_57851 [Dictyostelium purpureum]
gi|325077462|gb|EGC31172.1| hypothetical protein DICPUDRAFT_57851 [Dictyostelium purpureum]
Length = 817
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
L + D + A+ +G+R+R+A+KL+Q+N+K+ L S + +DL ++PG W QVA++
Sbjct: 8 LAKGRLDKFYYLAKEQGYRSRAAFKLVQLNKKYNFLGSAKACLDLCAAPGGWMQVASKYM 67
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTI 148
+ +V +D++ + + D E + D+ L D A
Sbjct: 68 PV---QSLIVGVDLVPIRQVRNCISLAEDITTQKCRTEIKKALKTWKVDVCLHDGAPNMG 124
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
D + L A A E L GG F+ K F+G N ++ + K F+KV KP
Sbjct: 125 TSWVQDAYQQAELTLHALKLATEFLATGGWFVTKVFRGADYNSLIWVFNKLFRKVESTKP 184
Query: 209 VASRAESVEMFLLAKGF 225
ASR S E+F++ +GF
Sbjct: 185 QASRNASAEIFVVCQGF 201
>gi|284162072|ref|YP_003400695.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Archaeoglobus profundus
DSM 5631]
gi|284012069|gb|ADB58022.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Archaeoglobus profundus
DSM 5631]
Length = 202
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 113/196 (57%), Gaps = 7/196 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
R D Y +A+ G+R+R+++KL+Q+N ++++ ++DLG+SPG WSQVA +
Sbjct: 2 RDRRDYYYWQAKKLGYRSRASFKLIQMNRTFKLIKEGDWVLDLGASPGGWSQVAVEL--- 58
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+VVA+DI MEPI GV F + D ++ E I+ + D+VLSD + G
Sbjct: 59 ---GAKVVAVDINPMEPIEGVHFIRGDITREETLEEIKS-VRRYYDVVLSDASPKISGKW 114
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
IDHL ++ L +A A E+L GG+F+VK FQG ++ K+ F+ P AS
Sbjct: 115 TIDHLLSIDLARSAFKIAREVLKDGGNFVVKVFQGEEIQNLFNEFKRFFRFKKFHSPKAS 174
Query: 212 RAESVEMFLLAKGFRK 227
R +S E++ + KGF++
Sbjct: 175 RKQSAEIYFVGKGFKR 190
>gi|67608071|ref|XP_666854.1| cell division protein [Cryptosporidium hominis TU502]
gi|54657922|gb|EAL36626.1| cell division protein [Cryptosporidium hominis]
Length = 275
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA--------------- 86
A+ EG+RARSAYKL+QI+EK+ I R VDL ++PGSWSQV +
Sbjct: 16 AKQEGFRARSAYKLIQIDEKYNIFDKVTRAVDLCAAPGSWSQVLSTKLLNNSEYNEGQPK 75
Query: 87 ---RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSD 142
+I +N +VA+D+ +M PI GV K D + I + G DLVL D
Sbjct: 76 ETDKIASNNEEAPLIVAVDLQEMAPIYGVNIIKGDITSRLTVSRILEYFQGKKADLVLCD 135
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
+ G ID L ++ +++ GG F+ K F+G + I + +F+
Sbjct: 136 GSPDVTGLHDIDEYIQNQLLISSLSITSKIMRKGGTFVAKIFRGENISRIYQQMFCYFEL 195
Query: 203 VIHVKPVASRAESVEMFLLAKGFR 226
V KP +SR S+E F++ + F+
Sbjct: 196 VDCCKPESSRNSSLEAFIVCRYFK 219
>gi|145546330|ref|XP_001458848.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426670|emb|CAK91451.1| unnamed protein product [Paramecium tetraurelia]
Length = 244
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 10/205 (4%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S Q ++ W HIND YV+ ++ R+R+A+KL+QINEK+ I + N+ ++DLG++PGS
Sbjct: 13 SSQKKTKRWYMEHINDFYVKESKRLQLRSRAAFKLMQINEKYAIYKPNQYVLDLGAAPGS 72
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL 140
WSQV + +V+AID+L++ PI VKF + D +D IRQ D+VL
Sbjct: 73 WSQVVSEK-------GKVMAIDLLEVSPIQNVKFIQGDIMDKQIMNQIRQH---KFDVVL 122
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
SDMA G + DH +L + A + L G+ ++KTF G + F
Sbjct: 123 SDMAPNVSGEHEADHQGITALNQTALLLSTFTLKTNGNLVMKTFVGSEEKLNYDFFRLFF 182
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
++ KP++S+ ES E+F + KGF
Sbjct: 183 KEFYREKPLSSKQESSELFYVGKGF 207
>gi|255543715|ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
gi|223547931|gb|EEF49423.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
Length = 828
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 7/199 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D + + A+ G+R+R+++KL+Q++ K Q L S+R ++DL ++PG W QVA +
Sbjct: 7 KHRLDKFYRLAKEHGYRSRASWKLVQLDSKFQFLHSSRAVLDLCAAPGGWMQVAVQRVPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN----PDLVLSDMAYPT 147
+ V+ ID++ + PI G + D + +++ +G + DLVL D +
Sbjct: 67 G---SLVLGIDLVKIAPIRGATSIEQDITKPECKARVKKIMGEHGVKAFDLVLHDGSPNI 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + + +L A A + L G F+ K F+ N ++ L + F+KV K
Sbjct: 124 GGAWAQEAMSQNALVIDAVRLATQFLAPKGTFVTKVFRSQDYNSVIYCLNQLFEKVEVDK 183
Query: 208 PVASRAESVEMFLLAKGFR 226
P ASR+ S E+F+L ++
Sbjct: 184 PAASRSASAEIFVLGLKYK 202
>gi|310822375|ref|YP_003954733.1| ribosomal RNA large subunit methyltransferase j [Stigmatella
aurantiaca DW4/3-1]
gi|309395447|gb|ADO72906.1| Ribosomal RNA large subunit methyltransferase J [Stigmatella
aurantiaca DW4/3-1]
Length = 215
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y Q+A+ EG RARSA+K+ +I + +++ ++DLG++PG + Q+ A G +
Sbjct: 15 KDHYFQKAKQEGLRARSAFKVDEILRRFPVVKKGGVVLDLGAAPGGFLQILADTVGLSGR 74
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V + I V D L D +R G D V+SDMA T G + D
Sbjct: 75 VIGVDIVAIRPFPQ-KHVTTAVLDVLADDFDARLRALYEGPLDAVISDMAPKTSGIKATD 133
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R++ L A A+E G F+ K F GG ++ + +V V+P A+R
Sbjct: 134 EARSLRLAGKALEVAVERGRPGSSFVAKLFMGGDFEAFRDQVRASYDEVKVVRPEATRGA 193
Query: 215 SVEMFLLAKGFR 226
S+E++L+ +
Sbjct: 194 SMEVYLVGLRLK 205
>gi|269860030|ref|XP_002649738.1| tRNA (Gm34, Gm37) 2'-O-methyltransferase [Enterocytozoon bieneusi
H348]
gi|220066797|gb|EED44268.1| tRNA (Gm34, Gm37) 2'-O-methyltransferase [Enterocytozoon bieneusi
H348]
Length = 264
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS-NRRIVDLGSSPGSWSQVAARIT 89
+R D Y A+ +RARS +KL QI+EK+ + + ++DL ++PGSWSQ + +
Sbjct: 5 SRDKRDVYYFMAKQNNYRARSIFKLKQIDEKYNVFNDTDINVLDLCAAPGSWSQYLSELK 64
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
+ N ++A+D+ DM PI GV +K D + + + V+ D A G
Sbjct: 65 ANRKNINNIIAVDLQDMMPIEGVTIYKDDITNEQFIKK---LSNMQINRVICDGAPDVTG 121
Query: 150 HRKIDHLRTMSLCEAATFFALEMLN--IGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
++D + L +A+ L + N F+ K F+G T I+ K++FQ+VI K
Sbjct: 122 FYELDLYAQIDLLKASLKITLHVCNDYNNVIFISKLFRGKYTKYIIHYFKQYFQEVILTK 181
Query: 208 PVASRAESVEMFLLAKGF 225
P ASR+ S E F++ K
Sbjct: 182 PRASRSTSNEAFIVCKKL 199
>gi|42522939|ref|NP_968319.1| cell division protein FtsJ [Bdellovibrio bacteriovorus HD100]
gi|81617714|sp|Q6MN40|RLME_BDEBA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|39574135|emb|CAE79312.1| cell division protein FtsJ [Bdellovibrio bacteriovorus HD100]
Length = 196
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 3/193 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y ++A+ E + ARS +KL +I++K ++ + + ++DLG+SPGSWSQ A+++ G
Sbjct: 6 RDHYFRKAKQENFAARSVFKLEEIDQKFKMFKPGQVVLDLGASPGSWSQYASKMAGEKGR 65
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTIGHRKI 153
V + F + D DL+ + ++ D+V+SDMA T G R
Sbjct: 66 VLGVDLS--PVTVKLKNAVFIQADLRDLNLEDIFKEHGFVPPFDIVMSDMAPKTTGIRMT 123
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
D R+M LCE A A L G F+ K F + +KK F KV VKP ++R
Sbjct: 124 DQARSMELCELALDVARRFLKKDGHFVCKLFHSDDFGKLRDEMKKTFAKVEAVKPDSTRK 183
Query: 214 ESVEMFLLAKGFR 226
S E+FL+ +
Sbjct: 184 ISKEIFLVGLSKK 196
>gi|145550654|ref|XP_001461005.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428837|emb|CAK93608.1| unnamed protein product [Paramecium tetraurelia]
Length = 954
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 3/195 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
R D Y A+ +G+R+R+A+KL Q+N K+ L + R +VDL ++PG W QV A+I
Sbjct: 59 ARSRLDKYYNLAKDQGYRSRAAFKLFQLNRKYNFLNNARTVVDLCAAPGGWMQVCAQIMP 118
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
++ + ++ +D++ ++PI G K F D + +++ I D+ L D A
Sbjct: 119 TS---STIIGLDLVHIKPIPGCKAFTQDITTPQCVQLLKKEIPQKADVFLHDGAPNVGAS 175
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L +A A + L GG F+ K F+ N ++ + K F KV KP+A
Sbjct: 176 WAKDAYNQNDLVLSALRLASQFLKKGGVFVTKVFRSTDYNSLMWVFNKFFSKVEATKPLA 235
Query: 211 SRAESVEMFLLAKGF 225
SR S E+F++ +
Sbjct: 236 SRFVSAEIFVVCLDY 250
>gi|167823655|ref|ZP_02455126.1| ribosomal RNA large subunit methyltransferase J [Burkholderia
pseudomallei 9]
Length = 256
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 103/191 (53%), Gaps = 10/191 (5%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI- 88
++ HINDPYV+ AQ EG+RAR+AYKL +I+E+ ++++ + IVDLG++PGSWSQ A
Sbjct: 1 MHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYARNKL 60
Query: 89 --------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
+ ++A+D+L MEP+ V F + DF + + + + G DLV
Sbjct: 61 AQGKRRDAVREGGIDGTIIALDMLPMEPVADVHFIQGDFREESVLHQLEEVLAGRAVDLV 120
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SDMA G D R +C+ A FA L G LVK F G + I+ K
Sbjct: 121 ISDMAPNLSGVAVADAARIEHVCDLALEFAQNHLKPDGALLVKCFHGSGYSQIVEKFKHQ 180
Query: 200 FQKVIHVKPVA 210
F+ V KP +
Sbjct: 181 FKTVAPRKPKS 191
>gi|254565435|ref|XP_002489828.1| Mitochondrial 2' O-ribose methyltransferase, required for
methylation of U(2791) in 21S rRNA [Pichia pastoris
GS115]
gi|238029624|emb|CAY67547.1| Mitochondrial 2' O-ribose methyltransferase, required for
methylation of U(2791) in 21S rRNA [Pichia pastoris
GS115]
gi|328350243|emb|CCA36643.1| ribosomal RNA large subunit methyltransferase E [Pichia pastoris
CBS 7435]
Length = 298
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 88/292 (30%), Positives = 126/292 (43%), Gaps = 70/292 (23%)
Query: 1 MVKPPGSSSRRGLTQKV---KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQ 57
M++ P S R + K + SSR WL R +DP+ + A + ++R+A+KLLQ
Sbjct: 1 MIQHPSVSLLRRQFARFVSLKVKGKSSSSRKWLERQSSDPFTKEAHAKALKSRAAFKLLQ 60
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
I+EK I + + +VDLG +PG+WSQVAA S N ++ IDIL EP GV +
Sbjct: 61 IHEKFNIFRPGQNVVDLGFAPGAWSQVAADKVTSRGN---ILGIDILACEPPKGVSSMQA 117
Query: 118 DFLDLDSWEFIRQAIGG-----------------------------------------NP 136
+ L + E I+
Sbjct: 118 NILSKTTHEMIKTHFYQLNMDKDLRKLQEIEPIADGPSYFQAEVDDNLEISNKQKQQFPV 177
Query: 137 DLVLSDMAYP---------------------TIGHRKIDHLRTMSLCEAATFFALEMLNI 175
D+V+SDM P T G DHL ++ LC+AA A+++L +
Sbjct: 178 DVVMSDMCEPFFQSSGFGSAITNKPFHRMANTTGMAFKDHLLSIDLCDAALILAIDILKV 237
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
G FL K FQG + LKK F+ V KP ASR ES E + + F+K
Sbjct: 238 NGTFLCKFFQGKEDKLLEARLKKCFKVVQRYKPPASRKESKENYFIC--FQK 287
>gi|123449199|ref|XP_001313321.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
gi|121895200|gb|EAY00392.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
Length = 250
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 69/194 (35%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y + A EGWRARSAYKL+Q+ + L+ + R+VDL S+PGSWSQV A++
Sbjct: 7 RRDVYKKTAVEEGWRARSAYKLIQVESEMHFLKDSTRVVDLCSAPGSWSQVCAKLMPET- 65
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRK 152
+ ++++ID+ + PI GV + D D+ + E + + GN D VL+D A TI +
Sbjct: 66 DARKIISIDLRRIVPIDGVTELRGDITDVKTAENVISLLDGNKADAVLADGAPDTIIRIE 125
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D ++ +A+ A +L GG F+ K F+ + +L + F K+ KP A R
Sbjct: 126 FDEYVQHNIVKASLTIATMVLREGGTFVSKIFRTKSLPKLLAIFGCFFSKITMCKPRACR 185
Query: 213 AESVEMFLLAKGFR 226
SVE F++ +GF+
Sbjct: 186 LSSVESFIVCQGFK 199
>gi|46134619|ref|XP_389476.1| hypothetical protein FG09300.1 [Gibberella zeae PH-1]
Length = 373
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 74/262 (28%), Positives = 111/262 (42%), Gaps = 64/262 (24%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KLLQ++E+ + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEEFDLFADVTRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT----------------------------------------------R 97
V +R+ +
Sbjct: 58 VLSRVLIKGEKFGRAAWQDKEAKFRQQMLGILPKDGDDEQQTTEIQQNEEEPAKPREDVK 117
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPD-------------LVLSDMA 144
+V+ID+ + P+ G+ + D + + A+ + D LVLSD A
Sbjct: 118 IVSIDLQPISPLAGITTLRADITHPATVPLLLSALDSSYDPKAAGTQASHPVDLVLSDGA 177
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G +D L AA AL +L GG F+ K F+G + + LK F+KVI
Sbjct: 178 PDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQLKIFFEKVI 237
Query: 205 HVKPVASRAESVEMFLLAKGFR 226
KP +SRA SVE F++ F+
Sbjct: 238 VAKPRSSRASSVEAFIVCINFQ 259
>gi|154150934|ref|YP_001404552.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Candidatus Methanoregula
boonei 6A8]
gi|189040312|sp|A7I848|RLME_METB6 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|153999486|gb|ABS55909.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanoregula boonei
6A8]
Length = 193
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 109/192 (56%), Gaps = 6/192 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D RA+ EG+R+R++YKL++I EK +++ + I+DLG++PGSW QV +T
Sbjct: 7 RDKVYLRAKHEGFRSRASYKLIEIQEKFAVIRRDDNIIDLGAAPGSWLQVLRTLT----- 61
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ RV+ ID+ + I G++ + D D + ++ + G +V+ D A GH+ D
Sbjct: 62 DGRVLGIDLNPIADIEGIETLEGDLTDPVVQKQAKE-MLGTVCIVVCDAAPKLSGHKSYD 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R ++L E A FA +L GG+F++K+FQG ++L ++ F V A+R
Sbjct: 121 QARAIALGEEALLFACNVLKPGGNFVIKSFQGADFPELLAAIQGQFYAVKTYSTKATRKG 180
Query: 215 SVEMFLLAKGFR 226
S E++++AK F+
Sbjct: 181 STEIYIIAKNFK 192
>gi|66358984|ref|XP_626670.1| ybr061c-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
gi|46228392|gb|EAK89291.1| ybr061c-like, FtsJ methylase [Cryptosporidium parvum Iowa II]
Length = 296
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA--------------- 86
A+ EG+RARSAYKL+QI+EK+ I R VDL ++PGSWSQV +
Sbjct: 37 AKQEGFRARSAYKLIQIDEKYNIFDKVTRAVDLCAAPGSWSQVLSTKLLNNSEYNEGQPK 96
Query: 87 ---RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSD 142
+I +N +VA+D+ +M PI GV K D + I + G DLVL D
Sbjct: 97 ETDQIDSNNGEAPLIVAVDLQEMAPIYGVNIIKGDITSQLTVSRILEYFQGKKADLVLCD 156
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
+ G ID L ++ +++ GG F+ K F+G + I + +F+
Sbjct: 157 GSPDVTGLHDIDEYIQNQLLVSSLSITSKIMRKGGTFVAKIFRGENISRIYQQMFCYFEL 216
Query: 203 VIHVKPVASRAESVEMFLLAKGFR 226
V KP +SR S+E F++ + F+
Sbjct: 217 VDCCKPESSRNSSLEAFIVCRYFK 240
>gi|257387081|ref|YP_003176854.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomicrobium mukohataei
DSM 12286]
gi|257169388|gb|ACV47147.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Halomicrobium mukohataei
DSM 12286]
Length = 262
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 6/197 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y RA+ EG+RARSAYKL Q++E +L NR ++DLG++PG W QVAA G+
Sbjct: 4 KDDYYNRAKQEGYRARSAYKLQQLDETAGLLGQNRTVLDLGAAPGGWMQVAAERVGTGGV 63
Query: 95 NTRVVAIDILDMEPI-LGVKFFKFDFLDLDSWEFIR-----QAIGGNPDLVLSDMAYPTI 148
V I D++ V+ + D D + E +R + D+V+SD+A
Sbjct: 64 VIGVDRQRIDDLDDPDPTVETIRGDMTDESTKEEVRDVVGAEGDERPVDVVISDLAPNMT 123
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G +DH R++ L A A ++L GGDF VK F G D+ ++ F+ V V+P
Sbjct: 124 GQYDLDHARSIHLARQAFAVAEDVLATGGDFAVKVFDGQDLADLEADIESEFEYVRQVRP 183
Query: 209 VASRAESVEMFLLAKGF 225
ASR S E++L+AKGF
Sbjct: 184 DASRDSSSELYLVAKGF 200
>gi|315425613|dbj|BAJ47272.1| ribosomal RNA large subunit methyltransferase E FtsJ [Candidatus
Caldiarchaeum subterraneum]
Length = 224
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
WL R DPY ++A+ G+ +R+A+KLL+I + +I++ +R++DLG++PG + VA+
Sbjct: 5 QWLQRRREDPYWRKAKEMGYPSRAAFKLLEIQSRWKIIREGQRVLDLGAAPGGMAAVASD 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPT 147
I G V + P + V + + + D+V+SD++
Sbjct: 65 IVGEKGLVVAVDRQPLQLTRPNI-VTIQADIYEARLTRDVQTALGEEFCDVVVSDLSPHH 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + + + L EA+ L GG+ + K F+ D + + F KV
Sbjct: 124 SGDYDLLVEQQIDLLEASLNLCHRFLRRGGNAVFKAFEHPRLRDFEKRMMRCFWKVERYV 183
Query: 208 PVASRAESVEMFLLAKGFR 226
P +++ S E+FLL G+R
Sbjct: 184 PRSTKKGSSEIFLLGLGYR 202
>gi|310800597|gb|EFQ35490.1| FtsJ-like methyltransferase [Glomerella graminicola M1.001]
Length = 410
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 109/268 (40%), Gaps = 70/268 (26%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KLLQ++E+ + + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEEFDLFANVTRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT----------------------------------------------- 96
V +R+
Sbjct: 58 VLSRVLIKGEKFGRSAWQDREAKFRQEMLGVFPAAPSEAGASAADKSDAEAAAGEEEIHP 117
Query: 97 ----RVVAIDILDMEPILGVKFFKFDFLDLDSWEF--------------IRQAIGGNPDL 138
++V+ID+ + P+ G+ + D + +Q DL
Sbjct: 118 RKDVKIVSIDLQPISPLPGIVTLRADITHPATVPLLLKALDPDYDANLTAKQQATDRVDL 177
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SD A G +D L AA AL +L GG F+ K F+G + + LK
Sbjct: 178 VISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQLKI 237
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V+ KP +SRA SVE F++ F+
Sbjct: 238 FFETVVVAKPRSSRASSVEAFIVCINFQ 265
>gi|328772897|gb|EGF82934.1| hypothetical protein BATDEDRAFT_831 [Batrachochytrium dendrobatidis
JAM81]
Length = 834
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y A+ +G+RARSA+KL+Q+N+K+ L+ + +VDL ++PG W QVA +
Sbjct: 13 DKYYHMAKEQGFRARSAFKLIQLNKKYSFLEKAKVVVDLCAAPGGWLQVAQKYMP---KP 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-QAIGGNPDLVLSDMAYPTIGHRKID 154
+ ++ +D+ ++PI GV D + IR + D+ L D A D
Sbjct: 70 SLIIGLDLAPIKPISGVITHVEDITTSKCRQTIRSELKDWKVDVFLHDGAPNVGISWLQD 129
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L +A A E L G F+ K F+ N +L + ++ F+KV KP +SR
Sbjct: 130 AFGQSELTLSALKLATEFLMPNGTFVTKVFRSKDYNKLLWVFQQLFRKVEATKPASSRNV 189
Query: 215 SVEMFLLAKGF 225
S E+F++ + +
Sbjct: 190 SAEIFVVCREY 200
>gi|22328933|ref|NP_194303.2| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
gi|332659706|gb|AEE85106.1| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
Length = 821
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D Y + A+ G+R+R++YKLLQ++ K+ +L S ++DL ++PG W QVA
Sbjct: 7 KHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKVPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF----IRQAIGGNPDLVLSDMAYPT 147
+ V+ ID++ + P+ G D + + Q +LVL D +
Sbjct: 67 G---SLVLGIDLVPILPVRGCVTMTQDITRTECKSKIKQVMEQHGVSAFNLVLHDGSPNV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + + +L + A E L G+ + K F+ N +L L + F+KV K
Sbjct: 124 GGAWAQEAMSQNALVIDSVRLATEFLARNGNLVTKVFRSRDYNSVLYCLGRLFEKVEVFK 183
Query: 208 PVASRAESVEMFLLAKGF 225
P ASR+ S E +L+ +
Sbjct: 184 PPASRSASAETYLVGLKY 201
>gi|58698158|ref|ZP_00373080.1| FtsJ-like methyltransferase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58535308|gb|EAL59385.1| FtsJ-like methyltransferase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 187
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 76/186 (40%), Positives = 115/186 (61%), Gaps = 7/186 (3%)
Query: 40 QRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVV 99
Q+ +G+R+RSAYKL++++ K ++ Q ++I+DLG+SPG W QVA++ VV
Sbjct: 2 QKTSKDGYRSRSAYKLVEMDNKFKLFQEGQKIIDLGASPGGWLQVASQ------KGANVV 55
Query: 100 AIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
A+D+ M I GV+F + D ++ + D++LSDMA + G + +DH+R M
Sbjct: 56 ALDVKPMNAINGVEFIQCDIINEFEI-LREKFKDQKFDVILSDMAPESCGLKSLDHIRIM 114
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
LCEAA FA L+ GG F+VK FQG + D LKK F+ V + KP +SR+ES EM+
Sbjct: 115 LLCEAALNFAKHFLSHGGTFVVKIFQGESDKDFCNELKKMFKTVKYFKPKSSRSESTEMY 174
Query: 220 LLAKGF 225
L++ GF
Sbjct: 175 LVSLGF 180
>gi|158520389|ref|YP_001528259.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfococcus oleovorans
Hxd3]
gi|254809550|sp|A8ZT18|RLME_DESOH RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|158509215|gb|ABW66182.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfococcus oleovorans
Hxd3]
Length = 207
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y ++A+ E + ARS YKL +I +KH +L+ ++DLG PGSW AA G
Sbjct: 13 DHYARKAKTEHYPARSVYKLQEIQKKHNVLKPGNAVLDLGCFPGSWMMFAAETVGRG--- 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
+V ID+ + + + + G D+VLSDMA T+G++ D
Sbjct: 70 GKVTGIDLKKVATHMPAQATSLQEDIYEIDREALAGTLGPLDVVLSDMAPDTMGNKFTDA 129
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
R+ L AA AL +L GG F+ K FQG + + ++K F++ KP R +S
Sbjct: 130 ARSFHLAAAALDLALFLLKPGGHFVCKVFQGEDFQNFVNMVKAEFERHKVFKPETCRKDS 189
Query: 216 VEMFLLAKGFRK 227
E +++ ++
Sbjct: 190 KETYVIGFSKKE 201
>gi|315427580|dbj|BAJ49179.1| ribosomal RNA large subunit methyltransferase E FtsJ [Candidatus
Caldiarchaeum subterraneum]
Length = 224
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 1/199 (0%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
WL R DPY ++A+ G+ +R+A+KLL+I + +I++ +R++DLG++PG + VA+
Sbjct: 5 QWLQRRREDPYWRKAKEMGYPSRAAFKLLEIQSRWKIIREGQRVLDLGAAPGGMAAVASD 64
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPT 147
I G V + P + V + + + D+V+SD++
Sbjct: 65 IVGEKGLVVAVDREPLQLTRPNI-VTIQADIYEARLTRDVQTALGEEFCDVVVSDLSPHH 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + + + L EA+ L GG+ + K F+ D + + F KV
Sbjct: 124 SGDYDLLVEQQIDLLEASLNLCHRFLRRGGNAVFKAFEHPRLRDFEKRMMRCFWKVERYV 183
Query: 208 PVASRAESVEMFLLAKGFR 226
P +++ S E+FLL G+R
Sbjct: 184 PRSTKKGSSEIFLLGLGYR 202
>gi|224004992|ref|XP_002296147.1| RNA methyltransferase [Thalassiosira pseudonana CCMP1335]
gi|209586179|gb|ACI64864.1| RNA methyltransferase [Thalassiosira pseudonana CCMP1335]
Length = 282
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 76/255 (29%), Positives = 117/255 (45%), Gaps = 40/255 (15%)
Query: 11 RGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ------I 64
RG + + R+ + SSR WL R DPYV +A+ EG +R+++KL +INE+ +
Sbjct: 28 RGKHSQSQGRNIKQSSRTWLERQQKDPYVHQAKKEGLPSRASFKLKEINEETNTPQPKRL 87
Query: 65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-----------VAIDILDMEPILGVK 113
+ N ++DLG++PG WS A+ ++ V I ++
Sbjct: 88 IAPNMLVLDLGAAPGGWSLYASTQLVASQGGAVVAVDLLPLSTEGDVIGRIENNLHGQFT 147
Query: 114 FFKFDFLDLDSWEFIRQAI------GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
F + DF + + I + P L++SDMA G K D L+T++LCE A
Sbjct: 148 FIQGDFTEKHVRDDIMDSFAQLSGNQTLPGLIVSDMAPHFTGDTKTDALQTINLCEQALT 207
Query: 168 FALEMLNIG---------------GDFLVKTFQGGTTND--ILCLLKKHFQKVIHVKPVA 210
FA+ G FL K F G N+ ++ +K+ F+ V +KP A
Sbjct: 208 FAVGDDCFDNSYSPRDAKGTLASGGSFLCKYFSCGKENELDLMEAIKRAFRSVHVLKPKA 267
Query: 211 SRAESVEMFLLAKGF 225
SR ES EM+LL F
Sbjct: 268 SRKESSEMYLLGLDF 282
>gi|17381234|gb|AAL36036.1| AT4g25730/F14M19_10 [Arabidopsis thaliana]
Length = 821
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D Y + A+ G+R+R++YKLLQ++ K+ +L S ++DL ++PG W QVA
Sbjct: 7 KHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKVPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF----IRQAIGGNPDLVLSDMAYPT 147
+ V+ ID++ + P+ G D + + Q +LVL D +
Sbjct: 67 G---SLVLGIDLVPILPVRGCVTMTQDITRTECKSKIKQVMEQHGVSAFNLVLHDGSPNV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + + +L + A E L G+ + K F+ N +L L + F+KV K
Sbjct: 124 GGAWAQEAMSQNALVIDSVRLATEFLARNGNLVTKVFRSRDYNSVLYCLGRLFEKVEVFK 183
Query: 208 PVASRAESVEMFLLAKGF 225
P ASR+ S E +L+ +
Sbjct: 184 PPASRSASAETYLVGLKY 201
>gi|219117612|ref|XP_002179598.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408651|gb|EEC48584.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 209
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 2/191 (1%)
Query: 38 YVQRAQLEGWRARSAYKLLQINEKHQILQSNRR-IVDLGSSPGSWSQVAARITGSNANNT 96
Y Q A+ +G R+R+A+KL QIN K+ +L+ + ++DL ++PG W+QVAAR +
Sbjct: 1 YSQVAKEQGLRSRAAFKLTQINRKYPVLEKAQNAVLDLCAAPGGWTQVAARTCNKSVPII 60
Query: 97 RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDH 155
V + I + D I+ A+ G P D+VL D A D
Sbjct: 61 AVDILPIRSFANAQNITTLIGDITTDKCKSDIKHALQGRPVDVVLHDGAPNIGADYGKDA 120
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
+ A A + L GG F+ K ++ LL++ FQ V KP ASRA+S
Sbjct: 121 YEQNEIALHALRCATQHLVKGGTFITKVYRSRDYASFQWLLQQLFQGVQAFKPKASRAQS 180
Query: 216 VEMFLLAKGFR 226
E+FL+ + ++
Sbjct: 181 AEIFLVCEKYK 191
>gi|119185034|ref|XP_001243345.1| hypothetical protein CIMG_07241 [Coccidioides immitis RS]
Length = 336
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 102/267 (38%), Gaps = 63/267 (23%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS+ W R D Y + A L G ++R+A+KLLQIN ++I + + +VDLG +PGS
Sbjct: 64 RRFASSKQWQARQFKDIYWREANLRGLKSRAAFKLLQINNHYRIFEPGQTVVDLGYAPGS 123
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPD--- 137
WSQVA +T N RV+ IDI+ +P GV + +FL +IR+ +
Sbjct: 124 WSQVAVDLTHPN---GRVLGIDIIPAQPPKGVSTIQGNFLSPRIQAYIREFLRNPDRGRP 180
Query: 138 ---LVLS------------------------DMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
+ S D++ DH E L
Sbjct: 181 LREELCSRTPQKPRTANEVETFEPGYIDREKDVSERISREPCDDHSPQTEAGEGTVDVVL 240
Query: 171 EMLN------------------------------IGGDFLVKTFQGGTTNDILCLLKKHF 200
+ GG F+ K +QG + LK F
Sbjct: 241 SDMMMNTSGLGFRDHARSMDLCNAAVNFSYDVLKPGGHFICKFYQGNEDQQLELRLKSLF 300
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFRK 227
QKV KP +SR ES E + + ++
Sbjct: 301 QKVHREKPDSSRKESREAYFIGLKRKR 327
>gi|307110257|gb|EFN58493.1| hypothetical protein CHLNCDRAFT_19573 [Chlorella variabilis]
Length = 358
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 97/182 (53%), Gaps = 4/182 (2%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD 105
G+R+R+++KL+Q+N + L R ++DL ++PG W QVA + + V+ +D++
Sbjct: 1 GYRSRASFKLIQLNRTYYFLSGARSLLDLCAAPGGWCQVAVKNMPVG---SLVIGVDLVA 57
Query: 106 MEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
++PI GVK D + I++ GG+ D+VL D A G + L
Sbjct: 58 IKPIRGVKTLVGDITTQKCRQAIKKETGGSLIDVVLHDGAPNVGGAWATEAYSQAWLVLE 117
Query: 165 ATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
A A ++L G F+ K F+ + +L ++ F KV KPVASR+ S E+F++ +G
Sbjct: 118 ALRMATDVLAPKGTFVTKVFRSKDYSPLLYAFQQLFTKVEATKPVASRSTSAEIFVVCRG 177
Query: 225 FR 226
++
Sbjct: 178 YK 179
>gi|121699614|ref|XP_001268080.1| tRNA methyltransferase, putative [Aspergillus clavatus NRRL 1]
gi|119396222|gb|EAW06654.1| tRNA methyltransferase, putative [Aspergillus clavatus NRRL 1]
Length = 428
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 111/269 (41%), Gaps = 72/269 (26%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-----SNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + + R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------------------------------------------- 93
GSWSQV +R+
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWIEKKRKEREALRRIDNAVEGQETVPEEEMEGTAELKPR 117
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-----------------IGGNP 136
N ++V+ID+ M P+ G+ + D + + +A
Sbjct: 118 KNVKIVSIDLQPMAPLEGITTLQADITHPSTIPLLLRALDPEAYNSADPSPSELQQPHPV 177
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLV+SD A G +D L +A AL +L GG F+ K F+G + + L
Sbjct: 178 DLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRGRDVDLLYAQL 237
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ F+KV KP +SRA S+E F++ +GF
Sbjct: 238 RTVFEKVSVAKPRSSRASSLEAFVVCEGF 266
>gi|325972772|ref|YP_004248963.1| ribosomal RNA large subunit methyltransferase E [Spirochaeta sp.
Buddy]
gi|324028010|gb|ADY14769.1| Ribosomal RNA large subunit methyltransferase E [Spirochaeta sp.
Buddy]
Length = 208
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
R D Y +RA EG+ ARS YKL ++ + +++S ++D+G++PGSW+
Sbjct: 5 RRDRADSYTKRAHKEGYPARSVYKLEELQQSFNLIKSGDTVLDVGAAPGSWTLYTHNELI 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
V ++ L + P+ V + G D+++SD A T+G+
Sbjct: 65 KGKGTIIAVDLNPLSLNPVP-VTVTSYVGDAFGKEMRNTLISHGPYDVIISDAAPMTMGN 123
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
R +D R+ +L E + A + L + G+ +VK FQGG ++L L++ F KV KP A
Sbjct: 124 RSVDTSRSENLAEQVIYLAKDHLKVHGNLVVKIFQGGGQVEMLKLMRTLFVKVKPFKPKA 183
Query: 211 SRAESVEMFLLAKGF 225
R +S E++L+
Sbjct: 184 CRDDSFEIYLVGMDK 198
>gi|134079334|emb|CAK96963.1| unnamed protein product [Aspergillus niger]
Length = 365
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 110/269 (40%), Gaps = 72/269 (26%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPDKVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------------------------------------------N 94
GSWSQV +R+
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWVEKKRKEKEALDRVRNGDNTTTVTSSEDTDMAELKPRK 117
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA------------------IGGNP 136
N ++V+ID+ M P+ G+ K D + + +A
Sbjct: 118 NVKIVSIDLQPMAPLEGITTLKADITHPSTIPLLLRALDPEAYDSSTSSTPSAIRPPHPV 177
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLV+SD A G +D L +A AL +L GG F+ K F+G + + L
Sbjct: 178 DLVISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRGRDVDLLYAQL 237
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ F+KV KP +SRA S+E F++ +GF
Sbjct: 238 RTVFEKVSVAKPRSSRASSLEAFVVCEGF 266
>gi|320593423|gb|EFX05832.1| trm7-like tRNA methyltransferase [Grosmannia clavigera kw1407]
Length = 385
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 109/269 (40%), Gaps = 72/269 (26%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KLLQ++E+ + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEEFDLFSGVTRVVDLCAAPGSWSQ 57
Query: 84 VAARITGSNANNT----------------------------------------------R 97
V +R+ +
Sbjct: 58 VLSRVLIKGEKFGRAAWQDREAELRQQMLGVLRMDGGKEREDSRAASTTSLPSTIRSDVK 117
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA---------------------IGGNP 136
+V+ID+ + P+ G+ + D + + QA
Sbjct: 118 IVSIDLQPISPLPGIVTLRADITHPATVPLLLQALDPERQQPDSEDTSDSTAAIVADNPV 177
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLVLSD A G +D L AA AL +L GG F+ K F+G + + L
Sbjct: 178 DLVLSDGAPDVTGLHDLDMYVQSQLLFAALNLALCVLRPGGKFVAKIFRGRNVDLLFAQL 237
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
K F++V+ KP +SRA SVE F++ F
Sbjct: 238 KLFFRRVVVAKPRSSRASSVEAFIVCLDF 266
>gi|303390043|ref|XP_003073253.1| 23S rRNA methyl-transferase [Encephalitozoon intestinalis ATCC
50506]
gi|303302398|gb|ADM11893.1| 23S rRNA methyl-transferase [Encephalitozoon intestinalis ATCC
50506]
Length = 550
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 4/195 (2%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
R D Y A+ +G+RARSA+KLLQIN K+ L+ ++DL ++PGSW QVAA+
Sbjct: 9 RTRLDKYYNLAKEKGYRARSAFKLLQINRKYAFLEKAHVLIDLCAAPGSWCQVAAQEMPL 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGH 150
++VA+D+ ++ + V D + D+VL D A
Sbjct: 69 RR---KIVAVDLEPIKFMGDVDTITADITSDECRLRLREILGTHKADVVLHDGAPNVGTS 125
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
+ D L + E L GG F+ K F+ +L +L + F+ V KP++
Sbjct: 126 WENDAFNQNLLVLHSARLTAEFLKKGGVFVTKVFRSQDYFSLLNILSQLFETVETSKPLS 185
Query: 211 SRAESVEMFLLAKGF 225
SR++S E+FL+ GF
Sbjct: 186 SRSQSAEIFLVCLGF 200
>gi|17553474|ref|NP_499776.1| hypothetical protein F45G2.9 [Caenorhabditis elegans]
gi|9910849|sp|O62251|RRMJ2_CAEEL RecName: Full=Putative ribosomal RNA methyltransferase F45G2.9;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|3877251|emb|CAB07618.1| C. elegans protein F45G2.9, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 214
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 10/215 (4%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
+ QG+ ++ R D + +A+ +RARSA+KL++INEK + L+ ++D+G +P
Sbjct: 4 TKKSQGNLHKYIQRQSTDEFAVKAREHNYRARSAFKLIEINEKFKFLKPESTVIDIGCAP 63
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS--WEFIRQAIGGNP 136
GSW QV + + + +D+ ++ PI G + + + +
Sbjct: 64 GSWLQVVVQKCPNGYASG----VDLQNVLPIRGADILSLSDITDPAVKLKIREKLAHRQV 119
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN----IGGDFLVKTFQGGTTNDI 192
D+VLSDMA G DHLR + LC + G +L K + G +
Sbjct: 120 DVVLSDMAPNPTGDNATDHLRLIELCRSVFRLFSVENEIELVKNGVYLCKIWDGSARAEF 179
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ L F V VKP A R S E++L + F+K
Sbjct: 180 VRELSDRFSTVKTVKPTACRDNSAELYLFCRNFKK 214
>gi|320535785|ref|ZP_08035866.1| ribosomal RNA large subunit methyltransferase J [Treponema
phagedenis F0421]
gi|320147333|gb|EFW38868.1| ribosomal RNA large subunit methyltransferase J [Treponema
phagedenis F0421]
Length = 197
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + ++A EG+ ARS YKL +IN+K ++ + +I+DLG++PGSW+ R NA
Sbjct: 9 DFWTKKAFSEGYPARSVYKLEEINKKFKLFSPSDKILDLGAAPGSWTSFVLRRMTPNAMI 68
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
V + + + FF+ D + +++ G + V+ D A T G++ +D
Sbjct: 69 CAVDLKPLAENIIDERLHFFQGDLYSKQIIQSVKEL--GPYNAVICDAAPATTGNKTVDT 126
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
R++ L E A F+A EML GG+F VK FQGG +L ++ F V KP A R+ S
Sbjct: 127 ARSLGLVELAVFYAQEMLVKGGNFTVKIFQGGDRQQLLKDMRNIFDTVKTFKPQACRSSS 186
Query: 216 VEMFLLAKGFR 226
E +L+ +
Sbjct: 187 FETYLIGLNRK 197
>gi|309355936|emb|CAP38015.2| hypothetical protein CBG_21206 [Caenorhabditis briggsae AF16]
Length = 236
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 70/240 (29%), Positives = 110/240 (45%), Gaps = 18/240 (7%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSC-QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M+K +S G + + +G+ ++ R D + +A+ +RARSA+KL++IN
Sbjct: 1 MLKKLENSGIFGKIRDFSTKKAAKGNLNRYIQRQSTDEFTVKAREHNYRARSAFKLIEIN 60
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDF 119
EK + L+ +VD+G +PGSW QV + + +D+ ++ PI G
Sbjct: 61 EKFKFLRPGITVVDVGCAPGSWLQVVVDKCPN----GYALGLDLQNVLPIRGADILSQSD 116
Query: 120 LDLDSWE----FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC---------EAAT 166
+ + Q G D+VLSDMA G + DHLR + LC E
Sbjct: 117 VTSPEIQAKIREKLQMRQGTVDVVLSDMAPNPTGDSETDHLRLIDLCRTVFRLFSKENTV 176
Query: 167 FFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
A E+ G FL K + G + + L F V +KP+A R S E++L +GFR
Sbjct: 177 ENAFELSRKNGVFLCKIWDGSGRGEFVRELSDRFSMVKTMKPMACRDMSAELYLFCRGFR 236
>gi|297799420|ref|XP_002867594.1| AT4g25730/F14M19_10 [Arabidopsis lyrata subsp. lyrata]
gi|297313430|gb|EFH43853.1| AT4g25730/F14M19_10 [Arabidopsis lyrata subsp. lyrata]
Length = 821
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D Y + A+ G+R+R++YKLLQ++ K+ +L S+ ++DL ++PG W QVA
Sbjct: 7 KHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSSHAVLDLCAAPGGWMQVAVEKVPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF----IRQAIGGNPDLVLSDMAYPT 147
+ V+ ID++ + P+ G D + + Q +LVL D +
Sbjct: 67 G---SLVLGIDLVPILPVRGCVTMTQDITRSECKSKIKQVMEQHGVSAFNLVLHDGSPNV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + + +L + A E L G+ + K F+ N +L L + F+KV K
Sbjct: 124 GGAWAQEAMSQNALVIDSVRLATEFLARNGNLITKVFRSRDYNAVLYCLGRLFEKVEVFK 183
Query: 208 PVASRAESVEMFLLAKGF 225
P ASR+ S E +L+ +
Sbjct: 184 PPASRSASAETYLVGLKY 201
>gi|289597003|ref|YP_003483699.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Aciduliprofundum boonei
T469]
gi|289534790|gb|ADD09137.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Aciduliprofundum boonei
T469]
Length = 195
Score = 141 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 5/192 (2%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D Y A+ G+++R+++KLLQIN++ +++ ++DLG++PG WSQVA +I G
Sbjct: 4 RDYYYWEAKKRGYKSRASFKLLQINDRFYLIRKGYTVLDLGAAPGGWSQVALKIVGREGR 63
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V + + V++ + D ++ + I++ D+VLSDM+ G D
Sbjct: 64 VIAVD----IKPVKLRDVEYIRGDVYSDETLKRIKERAEKV-DVVLSDMSPKISGISSWD 118
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
H R++ L E A F A +L G F+VK FQG N L + F V KP AS E
Sbjct: 119 HARSIDLAERALFIAENVLRERGHFVVKIFQGDMLNAYLKKCRDRFDMVKVHKPKASNRE 178
Query: 215 SVEMFLLAKGFR 226
S E++++ K F+
Sbjct: 179 SPEIYVVCKRFK 190
>gi|71746024|ref|XP_822237.1| FtsJ-like methyltransferase [Leishmania major strain Friedlin]
gi|321438176|emb|CBZ11928.1| putative FtsJ-like methyltransferase [Leishmania major strain
Friedlin]
Length = 459
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 79/250 (31%), Positives = 108/250 (43%), Gaps = 54/250 (21%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR---IVDLGSSPGSWSQVAAR 87
++ D Y ++A+ EG+RARSAYKLLQI+E+ IL VDL ++PGSWSQV A+
Sbjct: 5 SKDKRDIYYRKAKEEGYRARSAYKLLQIHEEFNILDPAEIRTGAVDLCAAPGSWSQVLAQ 64
Query: 88 ITG--------------SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ--- 130
A RVVA+D+ +M PI GV + D + I +
Sbjct: 65 HFKMISANLTAASEGDSLPAQTPRVVAVDLQEMAPIDGVTLLQGDITSEVTAREIIRLLN 124
Query: 131 ----------------------------------AIGGNPDLVLSDMAYPTIGHRKIDHL 156
A D+VL D A G ++D
Sbjct: 125 APTSTGVVRTDDEQQQPQPASSSFSSSAPSPALGASPRKADIVLCDGAPDVTGMHELDEY 184
Query: 157 RTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESV 216
L AA +L GG FL K F+G T ++ + FQ+V VKP +SR S+
Sbjct: 185 LQHHLLLAALHITTFVLRAGGCFLTKIFRGPNTAFLVAKSQLFFQQVRVVKPKSSRNASM 244
Query: 217 EMFLLAKGFR 226
E FLL +GFR
Sbjct: 245 ESFLLCQGFR 254
>gi|297809739|ref|XP_002872753.1| hypothetical protein ARALYDRAFT_911801 [Arabidopsis lyrata subsp.
lyrata]
gi|297318590|gb|EFH49012.1| hypothetical protein ARALYDRAFT_911801 [Arabidopsis lyrata subsp.
lyrata]
Length = 804
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D Y + A+ G R+R++YKLLQ++ K L S+R ++DL ++PG W QVA +
Sbjct: 7 KHRLDTYYRLAKESGLRSRASYKLLQLDAKFNFLHSSRTVLDLCAAPGGWMQVAVQKVPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDL------DSWEFIRQAIGGNPDLVLSDMAY 145
+ V+ ID++ + P+ G + D + DLVL D +
Sbjct: 67 G---SLVLGIDLVKIAPVRGCVTIQQDITRTTECKAKIKKALKKHGTDKTFDLVLHDGSP 123
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
G + + +L + A E L G+F+ K F+ + ++ L + F+ V
Sbjct: 124 NVGGAWSQEAMSQNALVIDSLKLATEFLAPHGNFITKIFRSRDYDSVVYCLGELFENVEV 183
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP+ASR+ S E +LL ++
Sbjct: 184 FKPMASRSTSAETYLLGLNYK 204
>gi|68074303|ref|XP_679066.1| methyltransferase [Plasmodium berghei strain ANKA]
gi|56499717|emb|CAH95392.1| methyltransferase, putative [Plasmodium berghei]
Length = 978
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 3/195 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y + A+ G+RARSA+KL+QI K+ I ++ ++DL ++PG W QVA +
Sbjct: 9 KERIDKYYKLAKSAGYRARSAFKLIQIARKYNIFKNANILIDLCAAPGGWLQVAYKNMNK 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL-SDMAYPTIGH 150
N+ T + + + V K D + + I+ I V+ +D A
Sbjct: 69 NS--TIIGVDLVPIRKIDNNVITIKSDITSAECIKKIKDIIQYEKADVILNDGAPNVGTT 126
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L ++ A + L GG F+ K F+ ++ +L+K F +V H+KP +
Sbjct: 127 YSYDSFNQNILVLSSIKLAYKFLTKGGIFITKVFRNEEYVSLIWVLEKLFGEVKHIKPRS 186
Query: 211 SRAESVEMFLLAKGF 225
SR S E++L+ F
Sbjct: 187 SREISSEIYLIGLNF 201
>gi|328953687|ref|YP_004371021.1| Ribosomal RNA large subunit methyltransferase E [Desulfobacca
acetoxidans DSM 11109]
gi|328454011|gb|AEB09840.1| Ribosomal RNA large subunit methyltransferase E [Desulfobacca
acetoxidans DSM 11109]
Length = 204
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
RH D Y +RA+ E + +R+ YKL I+ K Q+ + + ++DLG +PGSW Q + G
Sbjct: 5 RHKPDYYSRRARQESFASRAVYKLADIDRKFQLFKPGQCVLDLGCAPGSWLQYISSRIGP 64
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ L + ++F + D LD IR + D+V+SD+A T G +
Sbjct: 65 QGLVVGLDR-QALRISSNPSIRFVQVDVAALDPGSLIR--FSASFDVVVSDLAPSTSGIK 121
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
+DH R++ L + +A +L G +LVK FQG +K+HFQ+V +KP S
Sbjct: 122 DVDHQRSLDLARLSWEYANRLLTAAGHYLVKVFQGPDFPPFAQEIKQHFQQVDILKPSGS 181
Query: 212 RAESVEMFLLAK 223
R+ES E++LL +
Sbjct: 182 RSESRELYLLGR 193
>gi|302344658|ref|YP_003809187.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfarculus baarsii
DSM 2075]
gi|301641271|gb|ADK86593.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Desulfarculus baarsii
DSM 2075]
Length = 207
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
+R D Y +RA+ EG+ ARS YKL ++++++ +L+ R++D+G PGSW Q AA G
Sbjct: 3 SRKDQDSYYRRAKQEGFAARSVYKLQEMDQRYGLLRQGMRVLDIGCHPGSWLQYAAGRVG 62
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
V ++ P G +F + D L L E A+ D+VLSD+A T G
Sbjct: 63 PGGLVLGVDIQELAVDLPRWG-RFIQADVLKLTPAE--VLAVAPAFDVVLSDVAPRTTGV 119
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
R D ++++ EA AL +L GG FL K + G + ++ +K F+ KP A
Sbjct: 120 RHADEAASLAMLEAVFDLALAVLRPGGSFLAKVYFGPGVDQLIHQVKGRFKLGKGHKPAA 179
Query: 211 SRAESVEMFLLAKGFR 226
S+A S E+++L + +
Sbjct: 180 SKAASKEIYILGRELK 195
>gi|146075540|ref|XP_001462727.1| FtsJ-like methyltransferase [Leishmania infantum JPCM5]
gi|134066806|emb|CAM65266.1| putative FtsJ-like methyltransferase [Leishmania infantum JPCM5]
gi|322496134|emb|CBZ31205.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 457
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 81/248 (32%), Positives = 111/248 (44%), Gaps = 52/248 (20%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR---IVDLGSSPGSWSQVAA- 86
++ D Y ++A+ EG+RARSAYKLLQI+E+ IL VDL ++PGSWSQV A
Sbjct: 5 SKDKRDIYYRKAKEEGYRARSAYKLLQIHEEFNILDPAEIRTGAVDLCAAPGSWSQVLAQ 64
Query: 87 --RITGSN-----------ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ--- 130
++ G+N A RVVA+D+ +M PI GV + D + I +
Sbjct: 65 HFKMIGANLTAAAEGDSLPAQTPRVVAVDLQEMAPIDGVTLLQGDITSEVTAREIIRLLN 124
Query: 131 --------------------------------AIGGNPDLVLSDMAYPTIGHRKIDHLRT 158
A D+VL D A G ++D
Sbjct: 125 APTPTGVALTDDEQQQPANSSFSSPAPSPALGASPRKADIVLCDGAPDVTGMHELDEYLQ 184
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
L AA +L GG FL K F+G T ++ FQ+V VKP +SR S+E
Sbjct: 185 HHLLLAALHITTFVLRAGGCFLTKMFRGPNTAFLVAKSGLFFQQVRVVKPKSSRNASMES 244
Query: 219 FLLAKGFR 226
FLL +GFR
Sbjct: 245 FLLCQGFR 252
>gi|322491917|emb|CBZ27190.1| ribosomal RNA methyltransferase-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 285
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 64/230 (27%), Positives = 93/230 (40%), Gaps = 29/230 (12%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR--IVDLGSSPG 79
QG+SR W+ R DP+V +A+ +G+ ARSAYKL+ I+++ + +DLG SPG
Sbjct: 8 RQGTSRQWMQRQSQDPFVTKARQDGYVARSAYKLIHIDDRFHLFDRQHTRIAIDLGCSPG 67
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-------- 131
W QV G + + I V + DF D+ + E + Q
Sbjct: 68 GWCQVIRERAG--DRCFLLGVDLLPIKAQIPNVVIVQGDFTDVATQETLVQHLAHHSATL 125
Query: 132 ---------------IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
D+V SDM +G D R L A +L +G
Sbjct: 126 GGGDATTAVASSSSSCFTKVDVVTSDMCPNRMGG-SQDRQRIAQLNLQAINVCAPLLRVG 184
Query: 177 GDFLVKTFQGGT-TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G F+ K ++ C L + F V KP ASR +S E FL+
Sbjct: 185 GHFVCKVLGSRAVYEELWCRLSRLFLTVHTCKPPASRMQSDEAFLVGLDK 234
>gi|238501666|ref|XP_002382067.1| tRNA methyltransferase, putative [Aspergillus flavus NRRL3357]
gi|83766939|dbj|BAE57079.1| unnamed protein product [Aspergillus oryzae]
gi|220692304|gb|EED48651.1| tRNA methyltransferase, putative [Aspergillus flavus NRRL3357]
Length = 427
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 74/266 (27%), Positives = 111/266 (41%), Gaps = 69/266 (25%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-----SNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + + R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA------------------------------------------NNT 96
GSWSQV +R+ N
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWVEKKGKEAAALANANGDATDNNVDGDAAMEELKPRKNV 117
Query: 97 RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-----------------IGGNPDLV 139
++V+ID+ M P+ G+ K D + + +A DLV
Sbjct: 118 KIVSIDLQPMAPLEGITTLKADITHPSTIPLLLRALDPEAYDSTTSSPSSLRQPHPVDLV 177
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
+SD A G +D L AA AL +L GG F+ K F+G + I L+
Sbjct: 178 ISDGAPDVTGLHDLDIYIQSQLLYAALNLALGVLRPGGKFVAKIFRGRDVDLIYAQLRTV 237
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F+KV KP +SRA S+E F++ +GF
Sbjct: 238 FEKVSVAKPRSSRASSLEAFVVCEGF 263
>gi|322487855|emb|CBZ23099.1| putative FtsJ-like methyltransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 454
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 79/248 (31%), Positives = 107/248 (43%), Gaps = 52/248 (20%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR---IVDLGSSPGSWSQVAAR 87
++ D Y +RA+ EG+RARSAYKLLQINE+ IL VDL ++PGSWSQV A+
Sbjct: 5 SKDKRDIYYRRAKEEGYRARSAYKLLQINEEFNILSPAEIRTGAVDLCAAPGSWSQVLAQ 64
Query: 88 ITGSNA---------------NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
RVVA+D+ +M PI GV + D + I + +
Sbjct: 65 HFKMIGANAAAAAAEGDSLLAQTPRVVAVDLQEMAPIDGVTLLQGDITSEVTAREIIRLL 124
Query: 133 GGNP----------------------------------DLVLSDMAYPTIGHRKIDHLRT 158
D+VL D A G ++D
Sbjct: 125 NAPTSTGVTRTDDEPQPASSYFSSSAPSPALGASLRKADIVLCDGAPDVTGMHELDEYLQ 184
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
L AA +L GG FL K F+G T ++ + FQ+V VKP +SR S+E
Sbjct: 185 HHLLLAALHITTFVLRAGGCFLTKMFRGPNTAFLVAKSELFFQQVRVVKPKSSRNASMES 244
Query: 219 FLLAKGFR 226
FLL +GFR
Sbjct: 245 FLLCQGFR 252
>gi|268323180|emb|CBH36768.1| putative ribosomal RNA large subunit methyltransferase J
[uncultured archaeon]
Length = 204
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 8/195 (4%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ G+R+RSA+KLLQIN K ++++ ++DLG++PG WSQVA + G ++
Sbjct: 10 DRFYKSAKELGYRSRSAFKLLQINTKFGLIRAGDVVLDLGAAPGGWSQVAYGLVG---DS 66
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLD-----SWEFIRQAIGGNPDLVLSDMAYPTIGH 150
V+++D+ ME I + K D + + D V+SD++ G
Sbjct: 67 GLVLSVDLQPMENIADIVILKRDIAKEQETLAAIKAVLNRKGHELVDAVISDLSPQLSGT 126
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
R D R+ L +A A +L G+F+ K FQG N+ +K F+ P A
Sbjct: 127 RDYDQFRSSELSTSALNIASALLRNNGNFVAKIFQGAYYNEFYKCVKAKFRYTRAHSPAA 186
Query: 211 SRAESVEMFLLAKGF 225
SR S EM+++ KG+
Sbjct: 187 SRKGSAEMYVIGKGY 201
>gi|330836075|ref|YP_004410716.1| Ribosomal RNA large subunit methyltransferase E [Spirochaeta
coccoides DSM 17374]
gi|329747978|gb|AEC01334.1| Ribosomal RNA large subunit methyltransferase E [Spirochaeta
coccoides DSM 17374]
Length = 206
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 3/198 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA-ARIT 89
R+ D Y RA+ EG+ ARS YKL +I + +I++ +++D+G++PGSW+ I
Sbjct: 5 KRNTADSYTLRARKEGYPARSVYKLEEIQKVFRIIRPGAKVLDVGAAPGSWTLYVHREIL 64
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
+ V + V F D D + + G D ++SD A T G
Sbjct: 65 KGKGSIVAVDLNPLSLNPLPPSVMEFTGDAFSEDIRSLLV--VNGPYDAIISDAAPMTTG 122
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+R +D R+ +L E+ A E L G+ ++K FQGG N +L +KK+F K KP
Sbjct: 123 NRMVDVARSENLAESVLSLAREHLKPHGNLVIKIFQGGGHNAVLADVKKYFIKSKTFKPA 182
Query: 210 ASRAESVEMFLLAKGFRK 227
A R++S E +++ +K
Sbjct: 183 ACRSDSFETYIIGLDLKK 200
>gi|301060192|ref|ZP_07201059.1| ribosomal RNA large subunit methyltransferase J [delta
proteobacterium NaphS2]
gi|300445704|gb|EFK09602.1| ribosomal RNA large subunit methyltransferase J [delta
proteobacterium NaphS2]
Length = 197
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 63/201 (31%), Positives = 90/201 (44%), Gaps = 8/201 (3%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
S W +D Y ++A+ E W ARS YKL +I+ K ++++ N ++DLG PGSWSQ
Sbjct: 2 KSNRW-----DDHYTEKARKEKWLARSVYKLQEIDRKFKLIRRNDTVLDLGCFPGSWSQY 56
Query: 85 AARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMA 144
G N + P F A +LVLSD+A
Sbjct: 57 VIGKVGKGGNVVGIDLQKPKAFNPP---NFTYMKADIETVDPEQLSARIEPRNLVLSDLA 113
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
PT G R D R++ L E A A +L G F+ K F+ D L F ++
Sbjct: 114 PPTTGIRDTDASRSLFLAERAAEIARMLLKPKGHFVCKIFEDEALKDFKKDLGPAFGQIR 173
Query: 205 HVKPVASRAESVEMFLLAKGF 225
+P A+R S E++L+A GF
Sbjct: 174 LFRPKATRKRSREVYLVATGF 194
>gi|70991863|ref|XP_750780.1| tRNA methyltransferase [Aspergillus fumigatus Af293]
gi|66848413|gb|EAL88742.1| tRNA methyltransferase, putative [Aspergillus fumigatus Af293]
gi|159124342|gb|EDP49460.1| tRNA methyltransferase, putative [Aspergillus fumigatus A1163]
Length = 426
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 110/270 (40%), Gaps = 73/270 (27%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPDKVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNT------------------------------------------ 96
GSWSQV +R+ +
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWIEKKRKESEALKRIDHGSESESPAEEERKDDIAQLKPR 117
Query: 97 ---RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA------------------IGGN 135
++V+ID+ M P+ G+ + D + + +A
Sbjct: 118 RNVKIVSIDLQPMAPLEGITTLQADITHPSTIPLLLRALDPEAYDSASSPTPSAIQQPHP 177
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SD A G +D L +A A+ +L GG F+ K F+G + I
Sbjct: 178 VDLVISDGAPDVTGLHDLDIYVQSQLLYSALNLAVGVLRPGGKFVAKIFRGRDVDLIYAQ 237
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L+ F+KV KP +SRA S+E F++ +GF
Sbjct: 238 LRTVFEKVSVAKPRSSRASSLEAFVVCEGF 267
>gi|32490981|ref|NP_871235.1| hypothetical protein WGLp232 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|81741765|sp|Q8D2X0|RLME_WIGBR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|25166187|dbj|BAC24378.1| ftsJ [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 203
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 4/201 (1%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
S WL+ H +D +V+ ++ +R+R+ +K+ +I +K+ I++ ++D+GSSPG WS+ +
Sbjct: 6 SNWWLSEHYSDKFVKESKKCKYRSRAWFKIDEIQKKNNIIKPGMVVLDIGSSPGGWSKYS 65
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
++ G + +V+A DI M PI V F + + + ++L D++
Sbjct: 66 SQKVG---MSGKVIACDIDLMNPIPNVSFILGNI-FEKITIKKIKKVKKKVHIILCDISP 121
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
G IDH R +SL +L G ++K+F + ++ F+K+
Sbjct: 122 NITGLSIIDHSRWISLNNNILNICKYLLLKNGKLIIKSFNSVEIKNFCKKIENSFKKIKI 181
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP++SR+ S E++++A ++
Sbjct: 182 FKPISSRSRSKEIYIVAVNYK 202
>gi|119470072|ref|XP_001258008.1| tRNA methyltransferase, putative [Neosartorya fischeri NRRL 181]
gi|119406160|gb|EAW16111.1| tRNA methyltransferase, putative [Neosartorya fischeri NRRL 181]
Length = 426
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 111/270 (41%), Gaps = 73/270 (27%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-----SNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + + R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNT------------------------------------------ 96
GSWSQV +R+ +
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWIEKKRKESEALRRIDHGSESESPAEEEGKDDVAQLKPR 117
Query: 97 ---RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA------------------IGGN 135
++V+ID+ M P+ G+ + D + + +A
Sbjct: 118 RNVKIVSIDLQPMAPLEGITTLQADITHPSTIPLLLRALDPEAYDSASSSTPSAIQQPHP 177
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
DLV+SD A G +D L +A A+ +L GG F+ K F+G + I
Sbjct: 178 VDLVISDGAPDVTGLHDLDIYVQSQLLYSALNLAVGVLRPGGKFVAKIFRGRDVDLIYAQ 237
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L+ F+KV KP +SRA S+E F++ +GF
Sbjct: 238 LRTVFEKVSVAKPRSSRASSLEAFVVCEGF 267
>gi|322504161|emb|CAM41440.2| putative FtsJ-like methyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 457
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 78/252 (30%), Positives = 106/252 (42%), Gaps = 56/252 (22%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR---IVDLGSSPGSWSQVAAR 87
++ D Y ++A+ EG+RARSAYKLLQI E+ IL VDL ++PGSWSQV A+
Sbjct: 5 SKDKRDIYYRKAKEEGYRARSAYKLLQIEEEFHILDPAEIRTGAVDLCAAPGSWSQVLAQ 64
Query: 88 ITG---------------SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR--- 129
A RVVA+D+ +M PI GV + D + I
Sbjct: 65 CFKTIGANATAAAVAGAALPAQTPRVVAVDLQEMAPIDGVAILQGDITSEVTANEIIRLL 124
Query: 130 -----------------------------------QAIGGNPDLVLSDMAYPTIGHRKID 154
A D+VL D A G ++D
Sbjct: 125 NAPNSTGGPCTDDEQQQQPTSSNPSSSSSSHPPVLCASQRKADIVLCDGAPDVTGMHELD 184
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA +L GG FL K F+G T ++ + F++V VKP +SR
Sbjct: 185 EYLQHHLLLAALHITTFVLRAGGCFLTKMFRGPNTAFLIAKSEIFFEQVRVVKPKSSRNA 244
Query: 215 SVEMFLLAKGFR 226
S+E FLL +GFR
Sbjct: 245 SMESFLLCQGFR 256
>gi|154331472|ref|XP_001561554.1| FtsJ-like methyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 457
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 78/252 (30%), Positives = 106/252 (42%), Gaps = 56/252 (22%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR---IVDLGSSPGSWSQVAAR 87
++ D Y ++A+ EG+RARSAYKLLQI E+ IL VDL ++PGSWSQV A+
Sbjct: 5 SKDKRDIYYRKAKEEGYRARSAYKLLQIEEEFHILDPAEIRTGAVDLCAAPGSWSQVLAQ 64
Query: 88 ITG---------------SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR--- 129
A RVVA+D+ +M PI GV + D + I
Sbjct: 65 CFKTIGANATAAAVAGAALPAQTPRVVAVDLQEMAPIDGVAILQGDITSEVTANEIIRLL 124
Query: 130 -----------------------------------QAIGGNPDLVLSDMAYPTIGHRKID 154
A D+VL D A G ++D
Sbjct: 125 NAPNSTGGPCTDDEQQQQPTSSNPSSSSSSHPPVLCASQRKADIVLCDGAPDVTGMHELD 184
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L AA +L GG FL K F+G T ++ + F++V VKP +SR
Sbjct: 185 EYLQHHLLLAALHITTFVLRAGGCFLTKMFRGPNTAFLIAKSEIFFEQVRVVKPKSSRNA 244
Query: 215 SVEMFLLAKGFR 226
S+E FLL +GFR
Sbjct: 245 SMESFLLCQGFR 256
>gi|319760242|ref|YP_004124180.1| ribosomal RNA large subunit methyltransferase, ftsJ-like protein
[Candidatus Blochmannia vafer str. BVAF]
gi|318038956|gb|ADV33506.1| ribosomal RNA large subunit methyltransferase, ftsJ-like protein
[Candidatus Blochmannia vafer str. BVAF]
Length = 217
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSP 78
N+ C + W ++ D Y A++ R+RS +KL I++ + + ++DLGS+P
Sbjct: 3 NKKCFTRTFKWSKKYYIDKYSNEAKVRKLRSRSWFKLQFIDQIDVLFKKGTTVIDLGSAP 62
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-IRQAIGGNPD 137
G WS AA + ++A DIL M+ I GV F + + DL A
Sbjct: 63 GGWSIYAANKINNTGY---IMACDILPMKTIYGVDFVQGNCADLKVINKICCWAKDKKVQ 119
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
++LSDM+ T G ID ++ L A +L G F+VK FQG L +K
Sbjct: 120 VILSDMSPKTTGISVIDVYNSIHLGNIALNICKYVLVFEGSFVVKIFQGKGFEQYLHNVK 179
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP +SR S E++++AK F+
Sbjct: 180 SLFFDVKIRKPSSSRCNSREVYIVAKKFK 208
>gi|297180940|gb|ADI17143.1| 23S rRNA methylase [uncultured gamma proteobacterium HF0070_08D07]
Length = 209
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 3/207 (1%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S + + W D ++++AQ G +R+ +KL +++ K +L+ + I++LG++PG
Sbjct: 2 SRKKKTGGWRRSQREDFFLKKAQGRGLVSRAYFKLQELDAKFDLLKPKQSILELGAAPGG 61
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLV 139
W + + + +A+D ++ K + E R DLV
Sbjct: 62 WVRYIEDKL--SGDENLYIAVDPSPVKSSGLAKIISGKSNEPWVSQEIERILESKKLDLV 119
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDMA G R +D + + L E A A+ L GG + K FQG + ++
Sbjct: 120 LSDMAPNISGVRVVDDIASRELAEVALNTAVNYLAPGGRMVAKLFQGPEAQSFMEEAQEC 179
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F K + KP ASR ES E+F++A F+
Sbjct: 180 FLKSVLFKPAASRPESREVFVVADSFK 206
>gi|332297375|ref|YP_004439297.1| Ribosomal RNA large subunit methyltransferase E [Treponema
brennaborense DSM 12168]
gi|332180478|gb|AEE16166.1| Ribosomal RNA large subunit methyltransferase E [Treponema
brennaborense DSM 12168]
Length = 198
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + ++A EG+ ARS YKL +I+EK +++ N R++DLG+SPGSW+ R + +
Sbjct: 10 DYWSRKAFSEGYPARSVYKLKEIDEKFGMIRKNYRVLDLGASPGSWTVFVLRALDGSGHV 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
T V + + F + D D D + G DLV+ D A PT G+R +D
Sbjct: 70 TSVDLNPLAKNVKGENLTFIQGDLYDADVRRQAMEL--GPYDLVVCDAAPPTTGNRVVDT 127
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
R+ L E A ++A ML GG+F VK FQGG +L ++ F KP A R+ES
Sbjct: 128 ARSTGLVELAVYYAQTMLKAGGNFAVKVFQGGDQQALLKTMRGMFSSAKGFKPEACRSES 187
Query: 216 VEMFLLAKGFR 226
E +L+ G +
Sbjct: 188 FETYLVGLGKK 198
>gi|154274554|ref|XP_001538128.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces capsulatus
NAm1]
gi|150414568|gb|EDN09930.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces capsulatus
NAm1]
Length = 372
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 109/271 (40%), Gaps = 74/271 (27%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSNPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------------------------------------------- 93
GSWSQV +R+
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWEEKRQREQKQAQRLEGVKKGVETKEQQGEEEKEILKPR 117
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-------------------AIGG 134
N ++VAID+ M P+ G+ K D + + +
Sbjct: 118 KNVKIVAIDLQPMTPLDGITCLKADITHPSTIPLLLEALDPDDYTHNDTPTTTSTSHRLH 177
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
DLVLSD A G +D L AA A+ +L GG F+ K F+G + I
Sbjct: 178 PVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYA 237
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
LK F+ V KP +SRA S+E F++ +GF
Sbjct: 238 QLKTVFETVSVAKPRSSRASSLEAFVVCEGF 268
>gi|323447697|gb|EGB03609.1| hypothetical protein AURANDRAFT_33790 [Aureococcus anophagefferens]
Length = 311
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 99/204 (48%), Gaps = 14/204 (6%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR-----RIVDLGSSPGSWSQVA 85
+R D Y + A+ +RAR+A+KLLQ++ IL + R+ DL ++PG WSQV
Sbjct: 5 SRDKRDIYYRLAKTSNYRARAAFKLLQLDATLGILSTATTHDRLRVADLCAAPGGWSQVV 64
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG----NPDLVLS 141
A RVVA+D+ M PI GV+ D + + A+GG +VL
Sbjct: 65 AERRP----GARVVAVDLKPMAPIAGVEMVLGDITAAATAREVVDALGGGADARRGVVLC 120
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A IG +D L AA+ GG F+ K ++G +L L+KHF+
Sbjct: 121 DGAPDVIGLNDVDEHLQNELARAASGRREPPFL-GGCFVSKVYRGRDATALLESLRKHFR 179
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
V KP SR+ S E F++ +GF
Sbjct: 180 SVFVAKPRCSRSASPEAFVVCRGF 203
>gi|302511111|ref|XP_003017507.1| hypothetical protein ARB_04388 [Arthroderma benhamiae CBS 112371]
gi|291181078|gb|EFE36862.1| hypothetical protein ARB_04388 [Arthroderma benhamiae CBS 112371]
Length = 768
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+ ++ ++DL ++P
Sbjct: 13 DKWYRLAKEKGYRARAAFKLIQLNKKYGFLEKSKVLLDLCAAPVGV-------------- 58
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
D+ ++PI V F+ D + D VL D A D
Sbjct: 59 ------DLSPIKPIPKVITFQSDITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQD 112
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 113 AFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNV 172
Query: 215 SVEMFLLAKGFR 226
S E+F++ GF+
Sbjct: 173 SAEIFVVCLGFK 184
>gi|259487095|tpe|CBF85494.1| TPA: tRNA methyltransferase, putative (AFU_orthologue;
AFUA_6G08910) [Aspergillus nidulans FGSC A4]
Length = 420
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 110/267 (41%), Gaps = 70/267 (26%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-----SNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + + R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA-------------------------------------------NN 95
GSWSQV +R+ N
Sbjct: 58 GSWSQVLSRVLIKGESFGRRSWVEKRRKEQAALENLDGDAPAANQGADITDSTALKPRKN 117
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-----------------IGGNPDL 138
++V+ID+ M P+ G+ + D + + QA DL
Sbjct: 118 VKIVSIDLQPMAPLQGITTLQADITHPSTIPLLLQALDPEAYDSTSSTPHAVRQPHPVDL 177
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SD A G +D L +A AL +L GG F+ K F+ + + L+
Sbjct: 178 VISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRDRDVDLLYSQLRT 237
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGF 225
F++V KP +SRA S+E F++ +GF
Sbjct: 238 VFERVSVAKPRSSRASSLEAFIVCEGF 264
>gi|67522589|ref|XP_659355.1| hypothetical protein AN1751.2 [Aspergillus nidulans FGSC A4]
gi|40744881|gb|EAA64037.1| hypothetical protein AN1751.2 [Aspergillus nidulans FGSC A4]
Length = 420
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 110/267 (41%), Gaps = 70/267 (26%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-----SNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + + R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFEHENPEKVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA-------------------------------------------NN 95
GSWSQV +R+ N
Sbjct: 58 GSWSQVLSRVLIKGESFGRRSWVEKRRKEQAALENLDGDAPAANQGADITDSTALKPRKN 117
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-----------------IGGNPDL 138
++V+ID+ M P+ G+ + D + + QA DL
Sbjct: 118 VKIVSIDLQPMAPLQGITTLQADITHPSTIPLLLQALDPEAYDSTSSTPHAVRQPHPVDL 177
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SD A G +D L +A AL +L GG F+ K F+ + + L+
Sbjct: 178 VISDGAPDVTGLHDLDIYIQSQLLYSALNLALGVLRPGGKFVAKIFRDRDVDLLYSQLRT 237
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGF 225
F++V KP +SRA S+E F++ +GF
Sbjct: 238 VFERVSVAKPRSSRASSLEAFIVCEGF 264
>gi|218461485|ref|ZP_03501576.1| ribosomal RNA methyltransferase/cell division protein [Rhizobium
etli Kim 5]
Length = 126
Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 73/126 (57%), Positives = 96/126 (76%), Gaps = 2/126 (1%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P G+ + R L Q+VKN+ + SSR WL RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKAPIAGNRTGRKLGQRVKNKKMKASSRQWLQRHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+EK+ IL+ RRI+DLG++PGSWSQ+AA++TGS + RV AID L+M + GVK + D
Sbjct: 61 DEKYHILRGARRIIDLGAAPGSWSQIAAKVTGSTDEDIRVAAIDFLEMAQLPGVKILQLD 120
Query: 119 FLDLDS 124
FLD +
Sbjct: 121 FLDPSA 126
>gi|89071362|ref|ZP_01158495.1| cell division protein ftsJ [Oceanicola granulosus HTCC2516]
gi|89043139|gb|EAR49383.1| cell division protein ftsJ [Oceanicola granulosus HTCC2516]
Length = 199
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 86/169 (50%), Positives = 116/169 (68%)
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
+++++++L+ RIVDLG++PG W QVA TGS A + RVV ID L +EP+ G
Sbjct: 1 MDDRYKLLKPGHRIVDLGAAPGGWCQVAVDRTGSTAADVRVVGIDYLTVEPVAGATILLM 60
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
DFLD + + + + +G PD+VLSD+A PT GHR DH+RTM LC+ A FA+ L GG
Sbjct: 61 DFLDDAAPDKLMETLGEAPDIVLSDLAAPTTGHRPTDHIRTMHLCDVAADFAIRTLKPGG 120
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
FL KTFQGGT ++L LLK+HF V HVKP ASR SVE+++LAK F+
Sbjct: 121 HFLAKTFQGGTERELLTLLKRHFVSVHHVKPPASREGSVELYILAKSFK 169
>gi|302758756|ref|XP_002962801.1| hypothetical protein SELMODRAFT_404107 [Selaginella moellendorffii]
gi|300169662|gb|EFJ36264.1| hypothetical protein SELMODRAFT_404107 [Selaginella moellendorffii]
Length = 814
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D + A+ +G+R+R+A+KL+Q++ K+ L S ++DL ++PG W QVA
Sbjct: 8 KHRLDRFYYLAKEQGYRSRAAFKLVQLDRKYGFLSSAHSVLDLCAAPGGWMQVAVEKMPV 67
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW----EFIRQAIGGNPDLVLSDMAYPT 147
+ ++ +D++ + P+ G + D + + Q D+VL D +
Sbjct: 68 ---RSVIIGVDLVPIRPVRGALSLQGDITTPKCASDIGKILDQNGLRMVDVVLHDGSPNV 124
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + + SL + A + L G F+ K F+ N + ++ F KV K
Sbjct: 125 GGAWAKEAMTQSSLVLDSLKLATKFLAPKGTFVTKVFRSQDYNALKYAFEQLFAKVEVTK 184
Query: 208 PVASRAESVEMFLLAKGF 225
P+ASR+ S E++++ +
Sbjct: 185 PIASRSTSAEIYVVGLKY 202
>gi|323445643|gb|EGB02153.1| hypothetical protein AURANDRAFT_8728 [Aureococcus anophagefferens]
Length = 203
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 67/204 (32%), Positives = 99/204 (48%), Gaps = 14/204 (6%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR-----RIVDLGSSPGSWSQVA 85
+R D Y + A+ +RAR+A+KLLQ++ IL + R+ DL ++PG WSQV
Sbjct: 5 SRDKRDIYYRLAKTSNYRARAAFKLLQLDATLGILSTATTHDRLRVADLCAAPGGWSQVV 64
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG----NPDLVLS 141
A RVVA+D+ + PI GV+ D + + A+GG +VL
Sbjct: 65 AERRP----GARVVAVDLKPIAPIAGVEMVLGDITAAATAREVVDALGGGADARRGVVLC 120
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A IG +D L AA+ GG F+ K ++G +L L+KHF+
Sbjct: 121 DGAPDVIGLNDVDEHLQNELARAASGRREPPFL-GGCFVSKVYRGRDATALLESLRKHFR 179
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
V KP SR+ S E F++ +GF
Sbjct: 180 SVFVAKPRCSRSASPEAFVVCRGF 203
>gi|221057686|ref|XP_002261351.1| methyltransferase [Plasmodium knowlesi strain H]
gi|194247356|emb|CAQ40756.1| methyltransferase, putative [Plasmodium knowlesi strain H]
Length = 1009
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y + A+ G+RARSA+KL+QI +K+ I + ++DL ++PG W QVA +
Sbjct: 9 KERIDKYYKLAKSAGYRARSAFKLIQIAQKYNIFKDANILIDLCAAPGGWLQVAYKNMKR 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL-SDMAYPTIGH 150
++ T + + + V K D + I+ I V+ +D A
Sbjct: 69 SS--TIIGVDLVPIRKIDNNVITLKCDITTSACVKQIKNIIKNEKADVILNDGAPNVGTT 126
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L + A L G F+ K F+ ++ +++K F +V H+KP +
Sbjct: 127 YSYDSFNQNVLVLNSIKIANLFLKKKGIFITKVFRNEEYVSLIWVMEKLFGQVKHIKPRS 186
Query: 211 SRAESVEMFLLAKGF 225
SR S E++L+ F
Sbjct: 187 SREISSEIYLVGLNF 201
>gi|295658670|ref|XP_002789895.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Paracoccidioides
brasiliensis Pb01]
gi|226282856|gb|EEH38422.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Paracoccidioides
brasiliensis Pb01]
Length = 395
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 75/279 (26%), Positives = 109/279 (39%), Gaps = 82/279 (29%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------------------------------------------- 93
GSWSQV +R+
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWEEKRRRECSEEPKLENAKRDEHKWEAEGEEGKEEEQVL 117
Query: 94 ---NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF----------------------- 127
N ++VAID+ M P+ G+ K D +
Sbjct: 118 KPRKNVKIVAIDLQPMTPLEGITTLKADITHPSTIPLLLKALDPDDYAVTSDLTTSTTTR 177
Query: 128 -IRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
+ DLVLSD A G +D L AA A+ +L GG F+ K F+G
Sbjct: 178 NMPHHHPHPVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRG 237
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ I LK F++V KP +SRA S+E F++ +GF
Sbjct: 238 RDVDLIYAQLKTVFERVSVAKPRSSRASSLEAFVVCEGF 276
>gi|255722854|ref|XP_002546361.1| hypothetical protein CTRG_05839 [Candida tropicalis MYA-3404]
gi|240130878|gb|EER30440.1| hypothetical protein CTRG_05839 [Candida tropicalis MYA-3404]
Length = 255
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 16/225 (7%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN-RRIVDLG 75
K S ++++NR D +V + + +++R+A+KL +I++K I ++ R IVDLG
Sbjct: 16 FKRFKSDKSLKNYVNRVQGDSFVSQRKTSLYKSRAAFKLEEIDDKLHIFKNGTRNIVDLG 75
Query: 76 SSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
+PG+W+QVA S ++ +DI P+ G + + D + I +
Sbjct: 76 FAPGAWTQVAVNRLESKNLPYNILGVDINPASPVRGCHYIQGDVTKKSTQTKILEFFKRC 135
Query: 133 ------------GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
+ DLV+SDM T G DH ++ LC AA A L G DF+
Sbjct: 136 DVLDKITFEEDEYKHIDLVMSDMMVNTTGSSVNDHYGSIYLCNAALHLAFHQLKPGKDFV 195
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
VK F G + LK F +V VKP AS+ S E++L+ +
Sbjct: 196 VKIFNGSELDSFQARLKLMFAQVHAVKPRASKDVSSELYLVGRKK 240
>gi|19074557|ref|NP_586063.1| rRNA METHYL-TRANSFERASE [Encephalitozoon cuniculi GB-M1]
gi|19069199|emb|CAD25667.1| rRNA METHYL-TRANSFERASE [Encephalitozoon cuniculi GB-M1]
Length = 573
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 96/191 (50%), Gaps = 4/191 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y A+ +G+RARSA+KLLQ+N K+ L+ ++DL ++PGSWSQVAA+
Sbjct: 36 DKYYSLAKEKGYRARSAFKLLQMNRKYGFLEDAHVLIDLCAAPGSWSQVAAQEMPLRR-- 93
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
++VAID+ ++ I V D + + D+VL D A + D
Sbjct: 94 -KIVAIDLEPIKFIGDVDTIVEDITTDECRLKLREILGTHKADVVLHDGAPNVGTSWEND 152
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ +L +L + F V KP++SR++
Sbjct: 153 AFNQNLLVLHSARLAAEFLRKGGVFVTKVFRSQDYFSLLNVLSQLFGSVETSKPLSSRSQ 212
Query: 215 SVEMFLLAKGF 225
S E+FL+ GF
Sbjct: 213 SAEIFLVCLGF 223
>gi|156101269|ref|XP_001616328.1| FtsJ-like methyltransferase [Plasmodium vivax SaI-1]
gi|148805202|gb|EDL46601.1| FtsJ-like methyltransferase, putative [Plasmodium vivax]
Length = 1006
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 3/195 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y + A+ G+RARSA+KL+QI +K+ I + ++DL ++PG W QVA +
Sbjct: 9 KERIDKYYKLAKSAGYRARSAFKLIQIAQKYNIFKDANILIDLCAAPGGWLQVAYKNMKR 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL-SDMAYPTIGH 150
++ T + + + V K D + I+ I V+ +D A
Sbjct: 69 SS--TIIGVDLVPIRKIDNNVITLKCDITTGACIKQIKNIIKNEKADVILNDGAPNVGTT 126
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L + A L G F+ K F+ ++ +++K F +V H+KP +
Sbjct: 127 YSYDSFNQNVLVLNSIKIANLFLKKRGIFITKVFRNEEYVSLIWVMEKLFGQVKHIKPRS 186
Query: 211 SRAESVEMFLLAKGF 225
SR S E++L+ F
Sbjct: 187 SREISSEIYLIGLNF 201
>gi|256080076|ref|XP_002576309.1| cell division protein ftsj [Schistosoma mansoni]
gi|238661574|emb|CAZ32546.1| cell division protein ftsj, putative [Schistosoma mansoni]
Length = 244
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 32/231 (13%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH--QILQSNRRIVDLGSSPGSWSQVA 85
W+ R +DPYV+RA LE +R RSA+KLLQ+N+K I + +VD G++PGSW QVA
Sbjct: 6 KWIARQRSDPYVKRAHLESYRCRSAFKLLQLNDKISGGIFKPGDIVVDCGAAPGSWCQVA 65
Query: 86 ARITGSNA------------NNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-------- 125
+ +T N N V+A D+L+ P+ GV L+ S
Sbjct: 66 SSLTNCNNNNNNNLKASNNQNKGLVIAFDLLNFAPLPGVITHCGVDLNNWSECINLINQS 125
Query: 126 ---EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
F D+VLSD+A G R+ID M L A+ + G F++K
Sbjct: 126 ISSHFNNNNNNDGVDVVLSDIAPNVAGMREIDIPAMMKLAYNILRVAISVSKEGATFVIK 185
Query: 183 TFQGGTTNDILCLLKKHF-------QKVIHVKPVASRAESVEMFLLAKGFR 226
FQ + + + + +KP ASR ES E++L+A+GF+
Sbjct: 186 LFQSQEAEEFKQTVSQFYTLNSKCPSFTRFIKPEASRKESSEIYLVARGFQ 236
>gi|19113236|ref|NP_596444.1| mitochondrial 2' O-ribose methyltransferase Mrm2 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|9911005|sp|P78860|YBOF_SCHPO RecName: Full=Putative ribosomal RNA methyltransferase C2G2.15c;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|2956782|emb|CAA17895.1| mitochondrial 2' O-ribose methyltransferase Mrm2 (predicted)
[Schizosaccharomyces pombe]
Length = 218
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
W + D Y ++++++ +R+R+AYKL+++N K++ + ++D+G +PGSWSQVA ++
Sbjct: 10 WAAKRSKDFYRKKSKIDNFRSRAAYKLIELNSKYRFINKEDVVIDVGFAPGSWSQVAKKL 69
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-------------IGGN 135
G+ +V+ IDI + P GV D D ++ + +A
Sbjct: 70 VGNK---GKVIGIDIQHIAPPEGVLPIYGDIRDPNTLTKLFEALRLLHEPNTNDSIDCRV 126
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D V+SDM + G R DH +M LC +A AL L G F+ K + G D+ L
Sbjct: 127 VDAVISDMLHKATGIRIRDHALSMELCASALHVALTFLKSNGSFICKFYMGDEDADLQNL 186
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LK HF+ V +KP AS ES E + + +
Sbjct: 187 LKSHFRFVQVMKPKASLKESREAYFVCLERK 217
>gi|307111554|gb|EFN59788.1| hypothetical protein CHLNCDRAFT_18395 [Chlorella variabilis]
Length = 205
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + ++A+ G+ ARSAYKLL+I +KH+++ +I+DLG PG+W QVA G +
Sbjct: 2 DTFFKKAKASGYVARSAYKLLEIQQKHKLIPQGGQILDLGCHPGAWLQVACESLGPPSRG 61
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
R++ ID+ L EF ++ D VLSDM + T+G+ D
Sbjct: 62 GRILGIDMQRPAKCDERVTIVQADATLLPPEFWQEQAPDGYDAVLSDMCHFTLGNSMADA 121
Query: 156 LRTMSLCEAATFFAL-------------EMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
+++ L A A +L GG L+K QG T + L++ F K
Sbjct: 122 YKSLELARTAWAIATGGEAAYPNATLSRGVLRPGGTLLMKLLQGPGTQEFAAELRRDFAK 181
Query: 203 VIHVKPVASRAESVEMFLLAKGFR 226
V +P A+R+ES E+FLL +
Sbjct: 182 VAWHRPKATRSESKEVFLLGLKRK 205
>gi|268575662|ref|XP_002642810.1| Hypothetical protein CBG21206 [Caenorhabditis briggsae]
Length = 210
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ R D + +A+ +RARSA+KL++INEK + L+ +VD+G +PGSW QV
Sbjct: 5 IQRQSTDEFTVKAREHNYRARSAFKLIEINEKFKFLRPGITVVDVGCAPGSWLQVVVDKC 64
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE----FIRQAIGGNPDLVLSDMAY 145
+ + +D+ ++ PI G + + Q G D+VLSDMA
Sbjct: 65 PN----GYALGLDLQNVLPIRGADILSQSDVTSPEIQAKIREKLQMRQGTVDVVLSDMAP 120
Query: 146 PTIGHRKIDHLRTMSLC---------EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
G + DHLR + LC E A E+ G FL K + G + + L
Sbjct: 121 NPTGDSETDHLRLIDLCRTVFRLFSKENTVENAFELSRKNGVFLCKIWDGSGRGEFVREL 180
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V +KP+A R S E++L +GFR
Sbjct: 181 SDRFSMVKTMKPMACRDMSAELYLFCRGFR 210
>gi|16082347|ref|NP_394821.1| hypothetical protein Ta1365 [Thermoplasma acidophilum DSM 1728]
gi|74581427|sp|Q9HIH4|RLME_THEAC RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|10640708|emb|CAC12486.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 205
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 107/196 (54%), Gaps = 10/196 (5%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y RA+ + +R+R+AYKL + E++ I++ + ++++GSSPG W+QV
Sbjct: 5 HRDQYYWRAKRDQFRSRAAYKLEFLIERYGIIKDGQAVLEIGSSPGGWTQVLVD------ 58
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG----NPDLVLSDMAYPTIG 149
+ RVVA+DI M+ I GV F K + L D+ E IR+ + D+VLSD T G
Sbjct: 59 HGCRVVAVDIQPMDEIPGVIFLKLNILREDAAERIREEMARSLVQRFDVVLSDAMAKTSG 118
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
R DH ++ + A A++ L GG +VK FQG T D + +F+ KP
Sbjct: 119 IRSSDHAASVMIGNAVMKIAMDTLRRGGVAVVKQFQGDMTGDFIKNWGHYFRDHRITKPP 178
Query: 210 ASRAESVEMFLLAKGF 225
ASR ES E++++ GF
Sbjct: 179 ASRKESSEVYIIFYGF 194
>gi|70944493|ref|XP_742172.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521000|emb|CAH79645.1| hypothetical protein PC000405.03.0 [Plasmodium chabaudi chabaudi]
Length = 284
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 54/195 (27%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y + A+ G+RARSA+KL+QI +K+ I ++ ++DL ++PG W QVA +
Sbjct: 9 KERIDKYYKLAKSAGYRARSAFKLIQIAKKYNIFKNANILIDLCAAPGGWLQVAYKNMSK 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL-SDMAYPTIGH 150
++ T + + + V K D ++ I+ I V+ +D A
Sbjct: 69 SS--TIIGVDLMPIRKIDNNVITIKSDITSVECIRKIKDIIKYEKADVILNDGAPNVGTT 126
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L ++ A + L GG F+ K F+ ++ +L+K F +V H+KP +
Sbjct: 127 YSYDSFNQNILVLSSIKLAYKFLTRGGIFITKVFRNEEYVSLIWVLEKLFTEVKHIKPRS 186
Query: 211 SRAESVEMFLLAKGF 225
SR S E++L+ F
Sbjct: 187 SREISSEIYLIGLNF 201
>gi|302758118|ref|XP_002962482.1| hypothetical protein SELMODRAFT_141188 [Selaginella moellendorffii]
gi|302758956|ref|XP_002962901.1| hypothetical protein SELMODRAFT_78506 [Selaginella moellendorffii]
gi|300169343|gb|EFJ35945.1| hypothetical protein SELMODRAFT_141188 [Selaginella moellendorffii]
gi|300169762|gb|EFJ36364.1| hypothetical protein SELMODRAFT_78506 [Selaginella moellendorffii]
Length = 830
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D + A+ +G+R+R+A+KL+Q++ K+ L S ++DL ++PG W QVA
Sbjct: 8 KHRLDRFYYLAKEQGYRSRAAFKLVQLDRKYGFLSSAHSVLDLCAAPGGWMQVAVEKMPV 67
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW----EFIRQAIGGNPDLVLSDMAYPT 147
+ V+ +D++ + P+ G + D + + Q D+VL D +
Sbjct: 68 ---RSVVIGVDLVPIRPVRGALSLQGDITTPKCASDIGKILDQNGLRMVDVVLHDGSPNV 124
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + + SL + A + L G F+ K F+ N + ++ F KV K
Sbjct: 125 GGAWAKEAMTQSSLVLDSLKLATKFLAPKGTFVTKVFRSQDYNALKYAFEQLFAKVEVTK 184
Query: 208 PVASRAESVEMFLLAKGF 225
P+ASR+ S E++++ +
Sbjct: 185 PIASRSTSAEIYVVGLKY 202
>gi|255932265|ref|XP_002557689.1| Pc12g08590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582308|emb|CAP80486.1| Pc12g08590 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 435
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 111/276 (40%), Gaps = 79/276 (28%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + + R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDERFDLFEHENPDNVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------------------------------------------- 93
GSWSQV +R+
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWLEKKRKELKGLEAAETATADGDKMDCDEVSSSSELKPR 117
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA---------------------- 131
N ++V+ID+ M P+ G+ K D + + +A
Sbjct: 118 KNVKIVSIDLQPMAPLEGITTLKADITHPSTIPLLLRALDPEAYEQPSTPSESPSPATEA 177
Query: 132 --IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
DLV+SD A G +D L AA A+ +L GG F+ K F+G
Sbjct: 178 IRQPHPVDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLAMGVLRPGGKFVAKIFRGRDV 237
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ + L+ F++V KP +SRA S+E F++ +GF
Sbjct: 238 DLLYAQLRTVFERVSVAKPRSSRASSLEAFVVCEGF 273
>gi|325180137|emb|CCA14539.1| ribosomal RNA methyltransferase putative [Albugo laibachii Nc14]
Length = 264
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR-------- 87
D Y +RA+ +RARSA+KLLQ++++ + +R VDL ++PGSWSQV +R
Sbjct: 12 DVYYRRAKELKFRARSAFKLLQLDDQFDLFNDVQRAVDLCAAPGSWSQVLSRKLYSEREL 71
Query: 88 -----ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLS 141
+ + ++V++D+ + PI GVK + D + I + G +V+
Sbjct: 72 LDLKQRNDEDNESLKIVSVDLQETAPIPGVKLIQGDITSEKTVAEIARHFRGRKAQIVVC 131
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA + +L GG F+ K F + F
Sbjct: 132 DGAPDVTGMHDVDEFLQAELLHAALNVSAHVLEEGGTFVAKIFHCKQYELLASQFALFFA 191
Query: 202 KVIHVKPVASRAESVEMFLLAKGFR 226
V KP +SR +S E F++ + FR
Sbjct: 192 NVSRSKPESSRVQSNEAFIIGQQFR 216
>gi|162605884|ref|XP_001713457.1| SAM-dependent methyltransferase [Guillardia theta]
gi|13794389|gb|AAK39766.1|AF083031_123 SAM-dependent methyltransferase [Guillardia theta]
Length = 288
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D + +A+ R+R+A+KLL +N+K + +R I+DL S+PG W Q+ ++ N
Sbjct: 4 KDYWYHQAKKFNLRSRAAFKLLHLNDKFNFFKKSRSILDLCSAPGGWLQMCRILSNEN-- 61
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSW---EFIRQAIGGNPDLVLSDMAYPTIGHR 151
++ +D + PI + F D + E I ++L+D +
Sbjct: 62 -CKIFGVDAQKISPIKKCETFIGDITSPNLIGLLEKIVIKTNRKFCIILNDGSPKMGTFW 120
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
D L L G F+ K F+ N IL ++K F+KV KP +S
Sbjct: 121 NRDAYNQNILVLYCLRIIRLFLKNNGWFITKIFRSENFNKILFVVKNMFEKVFIKKPKSS 180
Query: 212 RAESVEMFLLAKGFR 226
R S E++L+ K F+
Sbjct: 181 RPNSAEIYLICKKFK 195
>gi|156060649|ref|XP_001596247.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154699871|gb|EDN99609.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 367
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 34/232 (14%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE---------------KHQILQSN 68
SS+D D Y + A+ +GWRARSA+KLLQ++E + + +
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEGIEPHYTAAFGRAAWEDKEARMR 57
Query: 69 RRIVDLGSSPGSWSQVAARITGSNAN-NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF 127
+ I+ + + P S Q ++ + ++VAID+ M P+ G+ + D +
Sbjct: 58 QNILGIATQPISEEQQTTGVSELKPKKDVKIVAIDLQPMSPLQGIITLRADITHPATVPL 117
Query: 128 IRQAIGGNPD-------------LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN 174
+ A+ + D LV+SD A G +D L AA AL +L
Sbjct: 118 LLNALDSSYDPKSLSQQASNPVDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLR 177
Query: 175 IGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG F+ K F+G + + LK F++V+ KP +SRA SVE F++ F+
Sbjct: 178 PGGKFVAKIFRGRNVDLLFAQLKIFFERVVVAKPRSSRASSVEAFIVCLNFQ 229
>gi|312076799|ref|XP_003141023.1| ribosomal RNA methyltransferase [Loa loa]
gi|307763813|gb|EFO23047.1| ribosomal RNA methyltransferase [Loa loa]
Length = 244
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 121/218 (55%), Gaps = 14/218 (6%)
Query: 18 KNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN------RRI 71
K++ + + +L + +D + ++A+ +RARSAYKLL+INEK++I++ +
Sbjct: 23 KSKKSTATLK-YLRKQCSDEFSRKAREHSYRARSAYKLLEINEKYKIIEPGEFYFKCMVV 81
Query: 72 VDLGSSPGSWSQVAARITGSN-ANNTRVVAIDILDMEPILGVKFFK-FDFLDLDSWEFIR 129
VD+G++PGSW QV A I N + V+ ID+ + P+ GV F D + E I+
Sbjct: 82 VDVGAAPGSWCQVVADIVQPNVYGDAFVLGIDLQPIMPVSGVNFLDLSDITAQKTHENIK 141
Query: 130 QAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLC----EAATFFALEMLNIGGDFLVKTF 184
Q + G D+V+SDMA G R IDH R +SLC E + ++ L G FL K +
Sbjct: 142 QLLNGRSVDVVISDMAPNPTGDRGIDHERILSLCGIVLELSVKKSVIPLVRNGTFLCKIW 201
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
G + + LK+ F KV VKP ASR S E++LLA
Sbjct: 202 DGPRREEFIERLKREFGKVYTVKPKASRDHSAEIYLLA 239
>gi|240277959|gb|EER41466.1| 2'-O-ribose methyltransferase [Ajellomyces capsulatus H143]
gi|325096021|gb|EGC49331.1| 2-O-ribose methyltransferase [Ajellomyces capsulatus H88]
Length = 379
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 109/278 (39%), Gaps = 81/278 (29%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSNPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------------------------------------------- 93
GSWSQV +R+
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWEEKWRREQKQAQRLERGKKGVETKEQQGEEEEEEGEEE 117
Query: 94 -------NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ---------------- 130
N ++VAID+ M P+ G+ K D + + +
Sbjct: 118 KEILKPRKNVKIVAIDLQPMTPLDGITCLKADITHPSTIPLLLEALDPDDYTHNDTLTTT 177
Query: 131 ---AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
DLVLSD A G +D L AA A+ +L GG F+ K F+G
Sbjct: 178 SISHRLHPVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGR 237
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ I LK F+ V KP +SRA S+E F++ +GF
Sbjct: 238 DVDLIYAQLKTVFETVSVAKPRSSRASSLEAFVVCEGF 275
>gi|146087128|ref|XP_001465733.1| ribosomal RNA methyltransferase-like protein [Leishmania infantum
JPCM5]
gi|134069833|emb|CAM68159.1| ribosomal RNA methyltransferase-like protein [Leishmania infantum
JPCM5]
gi|322499182|emb|CBZ34253.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 285
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/230 (28%), Positives = 93/230 (40%), Gaps = 29/230 (12%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS--NRRIVDLGSSPG 79
QG+SR W+ R DP+V +A+ +G+ ARSAYKL I+++ + R +DLG SPG
Sbjct: 8 RQGASRQWMQRQSQDPFVAKARQDGYVARSAYKLTHIDDRFHLFDRQHTRIAIDLGCSPG 67
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-------- 131
W QV G + + I I + DF D+ + E + +
Sbjct: 68 GWCQVIRERAGDRCFLLGIDLLPIK--AQIPNAVIVQGDFTDVTTQEKLVKCLAHHSATL 125
Query: 132 ---------------IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
D+V SDM +G D R L A +L IG
Sbjct: 126 GRGDATTAVASPSSSCFTKVDVVTSDMCPNRMGG-SQDRQRIAQLNLQAINVCAPLLRIG 184
Query: 177 GDFLVKTFQGG-TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G F+ K ++ C L + F V KP ASR S E FL+A
Sbjct: 185 GHFVCKVLGSRAAYEELWCRLSRLFLTVHACKPPASRMHSDEAFLVALDK 234
>gi|219851444|ref|YP_002465876.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanosphaerula
palustris E1-9c]
gi|254809556|sp|B8GG79|RLME_METPE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|219545703|gb|ACL16153.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanosphaerula
palustris E1-9c]
Length = 203
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 103/191 (53%), Gaps = 6/191 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D +RA EG+R+R+AYKL +I E+ I++ + IVDLG++PGSW QV +T
Sbjct: 7 KDKVYRRAMNEGFRSRAAYKLQEIQERFSIIREDDNIVDLGAAPGSWLQVERTLTK---- 62
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+V+ +D+ + I GV D + + ++ G ++VL D + GH+ D
Sbjct: 63 -GKVLGVDLNPIPSIDGVMTVVGDLTTSEVQQQVKDL-VGVVNVVLCDASPKLSGHKCYD 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R + L E A FA + GG+ +K+FQG +++L +KKHF V ++R
Sbjct: 121 QARAIGLGEDALMFAARTMKQGGNMAMKSFQGEMFHELLEEVKKHFYVVKTFHTKSTRRG 180
Query: 215 SVEMFLLAKGF 225
S E++++AK F
Sbjct: 181 STEIYIVAKNF 191
>gi|4539291|emb|CAB39594.1| putative protein [Arabidopsis thaliana]
gi|7269423|emb|CAB81383.1| putative protein [Arabidopsis thaliana]
Length = 821
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+H D Y + A+ G+R+R++YKLLQ++ K+ +L S ++DL ++PG W QVA
Sbjct: 7 KHRLDKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKVPV 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF----IRQAIGGNPDLVLSDMAYPT 147
+ V+ ID++ + P+ G D + + Q +LVL D +
Sbjct: 67 G---SLVLGIDLVPILPVRGCVTMTQDITRTECKSKIKQVMEQHGVSAFNLVLHDGSPNV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G + + +L + A E L G+ + K + LL + F+KV K
Sbjct: 124 GGAWAQEAMSQNALVIDSVRLATEFLARNGNLVTKMCVPEPFFLLAFLLVQLFEKVEVFK 183
Query: 208 PVASRAESVEMFLLAKGF 225
P ASR+ S E +L+ +
Sbjct: 184 PPASRSASAETYLVGLKY 201
>gi|145603067|ref|XP_362057.2| hypothetical protein MGG_04502 [Magnaporthe oryzae 70-15]
gi|145011391|gb|EDJ96047.1| hypothetical protein MGG_04502 [Magnaporthe oryzae 70-15]
Length = 341
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 97/261 (37%), Gaps = 57/261 (21%)
Query: 23 QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWS 82
S+ W R D + + A+++G ++R+A+KL++++ ++++ + + +VDLG +PGSWS
Sbjct: 62 SSSNSRWKARQGRDYFAREAKVQGLKSRAAFKLIEMDSRYRLFKKGQLVVDLGYAPGSWS 121
Query: 83 QVAARITGSNANNTRVVAI-------------DILDMEPILGVKFFKFDFLDLD------ 123
QVA T + I + L VK F D L
Sbjct: 122 QVAMERTKPGGRVLGIDVIPAQPPPGVATIQGNFLSPVVQGMVKQFVVDVHRLQARDRAR 181
Query: 124 ------------------SWEFIRQAIGGNPDLVLSDMAYPTI----------------- 148
E + I V +
Sbjct: 182 AGGAGAAGDDAGGGEADDCVEEKQSYIDMERHSVAEEEVVRAAISAEDGNDCEGIASPRA 241
Query: 149 ---GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
D LC AA FA + L GG F+ K +QG ++ L+K F KV
Sbjct: 242 ADASKGTQDKKLVDELCHAALRFASDTLRPGGHFVCKFYQGSADKELETQLRKLFTKVHR 301
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP +SR+ES E F +A +
Sbjct: 302 EKPDSSRSESKEAFFVALRRK 322
>gi|213408265|ref|XP_002174903.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Schizosaccharomyces
japonicus yFS275]
gi|212002950|gb|EEB08610.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Schizosaccharomyces
japonicus yFS275]
Length = 217
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL--GSSPGSWSQ 83
SR W +D + + ++ +R+R+AYKL+ +N KH I ++DL G +PGSWSQ
Sbjct: 8 SRTWAKARASDCFSKLSKKNNYRSRAAYKLIDLNRKHHIFNEGDTVIDLVKGFAPGSWSQ 67
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS--------WEFIRQAIGGN 135
VA + G V+ +D+ + P GV D + + +
Sbjct: 68 VALKAVGP---YGMVIGVDVRFVNPPQGVHAIIGDVKNNVTVNGVYQLLKKHYGNTQNNQ 124
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+V+SDM + G DH ++SLC AA F+ +L G + K ++G N
Sbjct: 125 CDVVISDMFHNATGIPFRDHTISISLCRAALEFSEHVLRSKGILICKYYKGIEENRFFKE 184
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L+ HF++VI KP ASR ES E + + +K
Sbjct: 185 LQSHFREVIRAKPKASRKESKENYFVCLDKQK 216
>gi|50289513|ref|XP_447188.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526497|emb|CAG60121.1| unnamed protein product [Candida glabrata]
Length = 281
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 51/249 (20%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN--RRIVDLGSSPG 79
+ SS+ WL+R D Y + ++L+ R+R+ +KL Q+++ + + + +RI+DLG +PG
Sbjct: 22 SRASSKRWLDRQKQDFYTRESKLDNLRSRAGFKLAQLDDVYHVFHKSVPQRILDLGYAPG 81
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI------- 132
+WSQVA + T + + V+ +DIL +P GV + + L + + IRQ
Sbjct: 82 AWSQVARKRTHPD---SIVLGVDILPCDPPFGVSSMQANILSKRTHQLIRQFFMEQIFMN 138
Query: 133 ------------------GGNPDLVLSDMAYP---------------------TIGHRKI 153
+++LSDM P T G
Sbjct: 139 DSQVESMARNDSDTEQQPQFPVNIILSDMYEPFPQLSPSLNNLTNMPYYRMSNTSGLNFK 198
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DHL ++ LC+AA A+++L G F+ K F G T+ +KK F +V KP ASR
Sbjct: 199 DHLNSIDLCDAALITAVDLLEPAGSFICKQFSGAETSLFEKRMKKVFDRVEITKPSASRD 258
Query: 214 ESVEMFLLA 222
ES E++ +
Sbjct: 259 ESKEIYFIG 267
>gi|88602762|ref|YP_502940.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanospirillum
hungatei JF-1]
gi|121697642|sp|Q2FNX6|RLME_METHJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|88188224|gb|ABD41221.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanospirillum hungatei
JF-1]
Length = 207
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 60/191 (31%), Positives = 100/191 (52%), Gaps = 6/191 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D +A+ G+R+R+A KL +I +K+ +++ + I+DLG++PGSW QV +T
Sbjct: 7 KDKAYLKAKQSGYRSRAAMKLKEIIQKNPVIRPDDNILDLGAAPGSWLQVLREMTN---- 62
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+V +D+ + PI GV+ DF D IR+ + +V D + G R D
Sbjct: 63 -GVIVGVDLNPILPIEGVRTIIGDFSDPVVIAQIRELMPEVNGIV-CDASPKLSGQRSFD 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R + L E A A ++L GG+ ++K+FQG + + +K+ F V K +R
Sbjct: 121 QARAIELNEMALGVARQLLKQGGNMIMKSFQGEDFSWLYNRVKQEFYSVRTYKAHTTRKG 180
Query: 215 SVEMFLLAKGF 225
S EM+++AK F
Sbjct: 181 STEMYIIAKNF 191
>gi|303311695|ref|XP_003065859.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105521|gb|EER23714.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320039764|gb|EFW21698.1| FtsJ-like methyltransferase [Coccidioides posadasii str. Silveira]
Length = 380
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 111/280 (39%), Gaps = 83/280 (29%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------------------------------------------- 93
GSWSQV +R+
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWEEKRKKQLRDLRRCEEETGRESFSEETQKKGDIDEDGS 117
Query: 94 ------NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA---------------- 131
N R+VAID+ M P+ G+ K D + + +A
Sbjct: 118 QILKPRKNVRIVAIDLQPMAPLDGITTLKADITHPSTIPLLLKALDPDLYSENENGNTST 177
Query: 132 ------IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
DLVLSD A G +D L AA A+ +L GG F+ K F+
Sbjct: 178 PSPSRPHPHPVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFR 237
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G + I LK F+KV KP +SRA S+E F++ +GF
Sbjct: 238 GRDVDLIYAQLKTVFEKVSVAKPRSSRASSLEAFVVCEGF 277
>gi|119193911|ref|XP_001247559.1| hypothetical protein CIMG_01330 [Coccidioides immitis RS]
Length = 380
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 111/280 (39%), Gaps = 83/280 (29%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------------------------------------------- 93
GSWSQV +R+
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWEEKRKKQLRDLRRCEEETGRESFSEETQKKGDIDEDGS 117
Query: 94 ------NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA---------------- 131
N R+VAID+ M P+ G+ K D + + +A
Sbjct: 118 QILKPRKNVRIVAIDLQPMAPLDGITTLKADITHPSTIPLLLKALDPDLYSENENGNTST 177
Query: 132 ------IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
D+VLSD A G +D L AA A+ +L GG F+ K F+
Sbjct: 178 PSPSRPHPHPVDVVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFR 237
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G + I LK F+KV KP +SRA S+E F++ +GF
Sbjct: 238 GRDVDLIYAQLKTVFEKVSVAKPRSSRASSLEAFVVCEGF 277
>gi|124486074|ref|YP_001030690.1| hypothetical protein Mlab_1254 [Methanocorpusculum labreanum Z]
gi|158512817|sp|A2SSW7|RLME_METLZ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|124363615|gb|ABN07423.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Methanocorpusculum
labreanum Z]
Length = 203
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 104/191 (54%), Gaps = 6/191 (3%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
D ++A +G+RARSAYKL+ INE+ +++ +VDLG++PGSW QV
Sbjct: 7 KDNVYRKAMRDGYRARSAYKLIDINERFNVIRQTDNVVDLGAAPGSWLQVL-----KTMT 61
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
++ +D+ + P+ V DF D IR+A+ ++V+ D + G + D
Sbjct: 62 EGQLCGVDLNPIIPLENVITITGDFTDPAIQAKIREAMP-LVNVVVCDASPHLSGAKAYD 120
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R M L E A FA +L GG+ ++K+FQG N++L L+K+ F V ++ A+R
Sbjct: 121 QARVMGLNEEALNFASNLLKQGGNLVMKSFQGSDFNELLALVKEKFYSVRVIRSTATRRG 180
Query: 215 SVEMFLLAKGF 225
S E +++AK F
Sbjct: 181 STECYIVAKNF 191
>gi|154337806|ref|XP_001565129.1| ribosomal RNA methyltransferase-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134062176|emb|CAM36564.1| ribosomal RNA methyltransferase-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 285
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 65/229 (28%), Positives = 96/229 (41%), Gaps = 29/229 (12%)
Query: 23 QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS--NRRIVDLGSSPGS 80
QG+SR W+ R DP+V +A+ +G+ ARSAYKL+ ++++ + R +VDLG SPG
Sbjct: 9 QGTSRQWMQRQSQDPFVTKARQDGYVARSAYKLIHMDDRFHLFDRQHTRIVVDLGCSPGG 68
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN----- 135
W QV G + + I + DF + + E + + + +
Sbjct: 69 WCQVIRERAG--DRCFLLGVDLLPIKAKIPNAVIVQGDFTEAATEEKLVKRLAHHSATLG 126
Query: 136 ------------------PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
D+V SDM +G D R L A +L GG
Sbjct: 127 RTDTVTAAAASSASRFTGVDIVTSDMCPNRMGG-SQDRQRIAQLNLQAINVCAPLLRTGG 185
Query: 178 DFLVKTFQGG-TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
F+ K ++ CLL + F V KP ASR S E FL+A G
Sbjct: 186 HFVCKVLGSRAAYEELWCLLSRLFLTVHTCKPPASRMHSDEAFLVALGK 234
>gi|27904834|ref|NP_777960.1| ribosomal RNA large subunit methyltransferase J [Buchnera
aphidicola str. Bp (Baizongia pistaciae)]
gi|38605259|sp|Q89AF1|RLME_BUCBP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|27904232|gb|AAO27065.1| ribosomal RNA large subunit methyltransferase J [Buchnera
aphidicola str. Bp (Baizongia pistaciae)]
Length = 210
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 106/201 (52%), Gaps = 6/201 (2%)
Query: 29 WLNRHINDPYVQRAQLE--GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
WLN H D YV++ R+R+ +KL I + L+ +VDLGSSPGSWS A
Sbjct: 12 WLNEHFKDKYVKQVHKNKSDIRSRAWFKLDDIQSSNNFLKVGMTVVDLGSSPGSWSGYAV 71
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDLVLSDMAY 145
+ G RV+A D+ M PI V FF+ + + + FI +++SDMA
Sbjct: 72 KRVG---KKGRVIACDMRPMLPIKDVVFFQGNIKNKCFFNFIETYLCHKKVHVIISDMAP 128
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
GH IDH++ + L + A ++++L+ GG LVK+F G N + + F KV
Sbjct: 129 NMTGHYFIDHIQAILLSKLALKMSIKVLSKGGSLLVKSFYGQEFNSFIQDVHVTFSKVKI 188
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP +SRA S E+++LA G +
Sbjct: 189 CKPNSSRARSREVYILASGRK 209
>gi|281207786|gb|EFA81966.1| rRNA methyltransferase [Polysphondylium pallidum PN500]
Length = 336
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 49/257 (19%)
Query: 11 RGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR 70
R + +K++S +WL R ++DPYV++AQL+ + +R+A+KL ++++K ++L++
Sbjct: 62 RSIASNLKDKS------EWLKRQLSDPYVKQAQLKSYVSRAAFKLEELDDKLKVLKAGSV 115
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
+VDLG++PG W+QVA + G++ V + D + F DF ++ I+
Sbjct: 116 VVDLGATPGGWTQVAQKRVGNSGIVFSVDINE--DGFELARANFIGGDFRSPETKLAIKN 173
Query: 131 A-----------------------------------------IGGNPDLVLSDMAYPTIG 149
A + G D+VLSDMA P G
Sbjct: 174 ALLKERSKRSKRSKSSSSSSKSGTTTTTIATATNDVDNNNIDVNGFVDVVLSDMAPPYCG 233
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+DH R + L A FA+E L GG F+ K +GG+ N++L +++HF +KP
Sbjct: 234 ISNVDHERLIDLAGQALDFAVETLKSGGYFIAKVSRGGSENELLKRIQQHFTTYKSMKPD 293
Query: 210 ASRAESVEMFLLAKGFR 226
ASR ES E++ + F+
Sbjct: 294 ASRQESSEIYYIGVKFK 310
>gi|119390695|pdb|2NYU|A Chain A, Crystal Structure Of Human Ftsj Homolog 2 (E.Coli) Protein
In Complex With S-Adenosylmethionine
gi|119390696|pdb|2NYU|B Chain B, Crystal Structure Of Human Ftsj Homolog 2 (E.Coli) Protein
In Complex With S-Adenosylmethionine
Length = 196
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 7/186 (3%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAI 101
+R+RSA+KLL++NE+HQIL+ R++D G++PG+WSQVA + ++ V+ +
Sbjct: 2 YRSRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGV 61
Query: 102 DILDMEPILGVKFFKF-DFLDLDSWEFIRQAIGGNPDLVL-SDMAYPTIGHRKIDHLRTM 159
D+L + P+ G F D D + + I + + G V+ SDMA G R +DH R +
Sbjct: 62 DLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLI 121
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
SLC ++L GG FL KT+ G + + L + FQ V +KP ASR ES E++
Sbjct: 122 SLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKESSEVY 181
Query: 220 LLAKGF 225
LA +
Sbjct: 182 FLATQY 187
>gi|257456100|ref|ZP_05621301.1| ribosomal RNA large subunit methyltransferase J [Treponema
vincentii ATCC 35580]
gi|257446486|gb|EEV21528.1| ribosomal RNA large subunit methyltransferase J [Treponema
vincentii ATCC 35580]
Length = 200
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 2/191 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + ++A EG+ ARS YKL ++ +K + ++DLG++PGSW+ R
Sbjct: 9 DYWSRKAFSEGYPARSVYKLEEMQKKFNLFGKTDSVLDLGAAPGSWTTFLLRFLSPEGRV 68
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
V + + + FF+ D D ++ G V+ D A T G++ +D
Sbjct: 69 CAVDLQPLSESIRDPRLSFFQGDLTGADMAAAVKS--CGPYRSVICDAAPATTGNKTVDT 126
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
R+ SL E A ++A L G+F VK FQGG+ L ++K F+ KP A R+ S
Sbjct: 127 ARSASLVEMALYYAETQLEAHGNFAVKIFQGGSEQQYLQQMRKMFKSARAFKPEACRSSS 186
Query: 216 VEMFLLAKGFR 226
E +LL F+
Sbjct: 187 FETYLLGLDFK 197
>gi|157869652|ref|XP_001683377.1| ribosomal RNA methyltransferase-like protein [Leishmania major]
gi|68126442|emb|CAJ04191.1| ribosomal RNA methyltransferase-like protein [Leishmania major
strain Friedlin]
Length = 285
Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 90/230 (39%), Gaps = 29/230 (12%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR--IVDLGSSPG 79
QG+SR W+ R DP+V +A+ +G+ ARSAYKL I+++ + +DLG SPG
Sbjct: 8 RQGTSRQWMQRQSQDPFVTKARQDGYVARSAYKLTHIDDRFHLFDRQHTRIAIDLGCSPG 67
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-------- 131
W QV G + + I + DF D+ + E + +
Sbjct: 68 GWCQVIRERAG--DRCFLLGVDLLPIKAQIPDAVIVQGDFTDVATQEKLVKYLAHHSATL 125
Query: 132 ---------------IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
D+V SDM +G D R L A +L +G
Sbjct: 126 GRGDATTAVAASSPSCFTKVDVVTSDMCPNRMGG-SQDRQRIAQLNLQAINVCAPLLRVG 184
Query: 177 GDFLVKTFQGG-TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G F K ++ C L + F V KP ASR S E FL+A
Sbjct: 185 GHFACKVLGSRAAYEELWCRLSRLFLTVHACKPPASRMHSDEAFLVALDK 234
>gi|72392565|ref|XP_847083.1| ribosomal RNA methyltransferase [Trypanosoma brucei TREU927]
gi|62175581|gb|AAX69714.1| ribosomal RNA methyltransferase, putative [Trypanosoma brucei]
gi|70803113|gb|AAZ13017.1| ribosomal RNA methyltransferase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 255
Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR--IVDLGSSPG 79
+ R W+ + DP+V A+ G+ ARSA+KLL++++K + +VD+G SPG
Sbjct: 9 RRHGGRQWMQQQSRDPFVLEARRRGYVARSAFKLLEMDDKFTLFSRGNTRVVVDIGCSPG 68
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-----GG 134
SW QV G + + G + DF + E + + G
Sbjct: 69 SWLQVIRERCG--DKCAVFGVDVLRVASTVTGAVCIQGDFTNPAVREELLARMVTVRAAG 126
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT-TNDIL 193
D+V SDM D + L +A FALE L GG+F+ K T ++
Sbjct: 127 VVDVVTSDMCLNRGTGSTSDRQKQEELNRSALAFALEQLVPGGNFVCKVLGSPTAYEELR 186
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + KP +SR S E F++ +G R+
Sbjct: 187 RDTCRWFVRTDICKPSSSRLTSDEAFMVCRGKRE 220
>gi|322699567|gb|EFY91328.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Metarhizium acridum
CQMa 102]
Length = 430
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 73/285 (25%), Positives = 109/285 (38%), Gaps = 87/285 (30%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE-------------------KHQI 64
SS+D D Y + A+ +GWRARSA+KLLQ++E + +
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEGPSRLPPPSSPVTPRLTSPEFNL 57
Query: 65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNT---------------------------- 96
+ R+VDL ++PGSWSQV +R+ N
Sbjct: 58 FANVSRVVDLCAAPGSWSQVLSRVLIENEQFGLRSWQDGEAHLRRSMLSVLPASTTPGGK 117
Query: 97 --------------------RVVAIDILDMEPILGVKFFKFDFLDLDS------------ 124
++VAID+ + P+ G+ + D +
Sbjct: 118 EAVEAAIAAQHAASRPRDDVKIVAIDLQPISPLAGITTLQADITHPATVPLLLGALDPGY 177
Query: 125 ---WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV 181
DLVLSD A G +D L AA AL +L GG F+
Sbjct: 178 DAQRAAAEGKASHPVDLVLSDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVA 237
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F+G + + LK F++V+ KP +SRA S+E F++ FR
Sbjct: 238 KIFRGRNVDVLYAQLKIFFERVVVAKPRSSRASSMEAFIVCLNFR 282
>gi|226288116|gb|EEH43629.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Paracoccidioides
brasiliensis Pb18]
Length = 397
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 73/281 (25%), Positives = 111/281 (39%), Gaps = 84/281 (29%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------------------------------------------- 93
GSWSQV +R+
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWEEKRRRECSEVRKLENAKREEHKREAEGEEEKEEEQVL 117
Query: 94 ---NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSD-------- 142
N ++VAID+ M P+ G+ K D + + +A+ + V+SD
Sbjct: 118 KPRKNVKIVAIDLQPMTPLEGITTLKADITHPSTIPLLLKALDPDDYAVISDLTTTTTTG 177
Query: 143 ------------------MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
A G +D L AA A+ +L GG F+ K F
Sbjct: 178 NMPHHHPPPHPVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIF 237
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+G + I LK F++V KP +SRA S+E F++ +GF
Sbjct: 238 RGRDVDLIYAQLKTVFERVSVAKPRSSRASSLEAFVVCEGF 278
>gi|225679098|gb|EEH17382.1| 2'-O-ribose methyltransferase [Paracoccidioides brasiliensis Pb03]
Length = 397
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 73/281 (25%), Positives = 111/281 (39%), Gaps = 84/281 (29%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNA--------------------------------------------- 93
GSWSQV +R+
Sbjct: 58 GSWSQVLSRVLIKGESFGRRAWEEKRRRECSEVRKLENAKREEHKREAEGEEEKEEEQVL 117
Query: 94 ---NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSD-------- 142
N ++VAID+ M P+ G+ K D + + +A+ + V+SD
Sbjct: 118 KPRKNVKIVAIDLQPMTPLEGITTLKADITHPSTIPLLLKALDPDDYAVISDLTTTTTTG 177
Query: 143 ------------------MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
A G +D L AA A+ +L GG F+ K F
Sbjct: 178 NMPHHHPHPHPVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIF 237
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+G + I LK F++V KP +SRA S+E F++ +GF
Sbjct: 238 RGRDVDLIYAQLKTVFERVSVAKPRSSRASSLEAFVVCEGF 278
>gi|242764601|ref|XP_002340808.1| tRNA methyltransferase, putative [Talaromyces stipitatus ATCC
10500]
gi|218724004|gb|EED23421.1| tRNA methyltransferase, putative [Talaromyces stipitatus ATCC
10500]
Length = 425
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 69/277 (24%), Positives = 106/277 (38%), Gaps = 82/277 (29%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSPGSWSQVA 85
++ D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++PGSWSQV
Sbjct: 5 SKDKRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHADPDSVTRVVDLCAAPGSWSQVL 64
Query: 86 A-------------------------RITGSNA-----------------------NNTR 97
+ G + N +
Sbjct: 65 SRVLIKGESFGRRAWLEKRRRDKKALEKVGKESENTQEGEQDDDDTEDESIILKPRKNVK 124
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWE-----------------------------FI 128
+VAID+ M P+ G+ K D + +
Sbjct: 125 IVAIDLQPMAPLEGITMMKADITHPSTIPLLLRALDPEYYEEGSEKRDTPQSNTTTSTKL 184
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
DLV+SD A G +D L AA + +L GG F+ K F+G
Sbjct: 185 PSRHPHPVDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLTIGVLRPGGKFVAKIFRGRD 244
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ + L+ F+KV KP +SRA S+E F++ +GF
Sbjct: 245 VDLLYAQLRTVFEKVSVAKPRSSRASSLEAFVVCEGF 281
>gi|124513798|ref|XP_001350255.1| methyltransferase, putative [Plasmodium falciparum 3D7]
gi|23615672|emb|CAD52664.1| methyltransferase, putative [Plasmodium falciparum 3D7]
Length = 1019
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y + A+ G+RARSA+KL+QI +K + ++ ++DL ++PG W QVA +
Sbjct: 9 KERIDKYYKLAKTAGYRARSAFKLIQIAQKFNVFKNANILIDLCAAPGGWLQVAYKNM-- 66
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL-SDMAYPTIGH 150
+ +T + + + V K D D + I+ I + V+ +D A
Sbjct: 67 SKQSTIIGVDLVPIRKIDDNVITIKSDITTSDCIKKIKNIIKMDKADVILNDGAPNVGTT 126
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L + A L G F+ K F+ ++ +L+K F V H+KP +
Sbjct: 127 YSYDSFNQNVLVLNSIKIAYIFLKKNGIFITKVFRNEEYISLIWVLEKLFGDVKHIKPRS 186
Query: 211 SRAESVEMFLLAKGF 225
SR S E++L+ F
Sbjct: 187 SREISSEIYLVGLNF 201
>gi|198453132|ref|XP_001359081.2| GA18746 [Drosophila pseudoobscura pseudoobscura]
gi|198132224|gb|EAL28224.2| GA18746 [Drosophila pseudoobscura pseudoobscura]
Length = 304
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KLL I++ + IL RR VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRQAKEEGWRARSAFKLLHIHDAYGILNGVRRAVDLCAAPGSWSQVLSRKLY 64
Query: 90 -----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI----GGNPDLVL 140
+ + T+++A+D+ M PI GV + D + E I LV+
Sbjct: 65 DTCQNDAEKSATKIIAVDLQAMAPIRGVLQLQGDITKESTAEAIISHFSADGQEKAQLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G ++D L +A A +L GG F+ K FQG T + +K F
Sbjct: 125 CDGAPDVTGVHEMDEYMQHQLLVSALSIATVVLETGGSFVAKIFQGNATGLLSTQMKIFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
K KP +SR+ S+E F++ F
Sbjct: 185 NKFDIYKPPSSRSSSIESFVVCSDF 209
>gi|303313694|ref|XP_003066856.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106523|gb|EER24711.1| FtsJ-like methyltransferase family protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 300
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 63/264 (23%), Positives = 97/264 (36%), Gaps = 57/264 (21%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR----------- 69
SS+ W R D Y + A L G ++R+A+KLLQIN ++I + +
Sbjct: 28 RRFASSKQWQARQFKDIYWREANLRGLKSRAAFKLLQINNHYRIFEPGQTVVDLGYAPGS 87
Query: 70 -------------RIVDLGSSPGSWSQVAARITGS------------------------- 91
R++ + P + + I G+
Sbjct: 88 WSQVAVDLTHPNGRVLGIDIIPAQPPKGVSTIQGNFLSPRIQAYIREFLRNPDRGRPLRE 147
Query: 92 ------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF--IRQAIGGNPDLVLSDM 143
++ + I + E +A G D+VLSDM
Sbjct: 148 ELCSRTPQKTWTANEVETFEPGYIDRERDVSERISREPCDEHSPQTEAGEGTVDVVLSDM 207
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH R+M LC AA F+ ++L GG F+ K +QG + LK FQKV
Sbjct: 208 MMNTSGLGFRDHARSMDLCNAAVNFSYDVLKPGGHFICKFYQGNEDQQLELRLKSLFQKV 267
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
KP +SR ES E + + ++
Sbjct: 268 HREKPDSSRKESREAYFIGLKRKR 291
>gi|195146443|ref|XP_002014194.1| GL24549 [Drosophila persimilis]
gi|194103137|gb|EDW25180.1| GL24549 [Drosophila persimilis]
Length = 304
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 10/205 (4%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KLL I++ + IL RR VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRQAKEEGWRARSAFKLLHIHDAYGILNGVRRAVDLCAAPGSWSQVLSRKLY 64
Query: 90 -----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI----GGNPDLVL 140
+ + T+++A+D+ M PI GV + D + E I LV+
Sbjct: 65 DTCQNDAEKSATKIIAVDLQAMAPIRGVLQLQGDITKESTAEAIISHFSADGEEKAQLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G ++D L +A A +L GG F+ K FQG T + +K F
Sbjct: 125 CDGAPDVTGVHEMDEYMQHQLLVSALSIATVVLESGGSFVAKIFQGNATGLLSTQMKIFF 184
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
K KP +SR+ S+E F++ F
Sbjct: 185 NKFDIYKPPSSRSSSIESFVVCSDF 209
>gi|291288275|ref|YP_003505091.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Denitrovibrio
acetiphilus DSM 12809]
gi|290885435|gb|ADD69135.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Denitrovibrio
acetiphilus DSM 12809]
Length = 197
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 57/193 (29%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + ++A+LEG+++R+AYKL+++N+KH + +S ++D+G +PG W QV +
Sbjct: 4 RKDAFYKKAKLEGFKSRAAYKLIELNKKHALFRSGDAVLDVGCAPGGWIQVVLQQKKCTV 63
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
++ + L F + D + ++ + + A G D V+SD A T G + +
Sbjct: 64 VGVDLLEVLNLTDTRF---TFIQGDITEQETVDKVLDACDG-YDCVISDAAPNTSGSKLL 119
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH+ ++ L +FA +L GG+F K F+G + ++ +KK F ++P A+R
Sbjct: 120 DHVNSVDLVRLIFYFAKTVLKKGGNFACKVFEGEDRDALVKEIKKDFDFCKMLRPEATRK 179
Query: 214 ESVEMFLLAKGFR 226
S EM+++ KGF+
Sbjct: 180 NSFEMYIVFKGFK 192
>gi|118369700|ref|XP_001018053.1| FtsJ-like methyltransferase family protein [Tetrahymena
thermophila]
gi|89299820|gb|EAR97808.1| FtsJ-like methyltransferase family protein [Tetrahymena thermophila
SB210]
Length = 947
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 101/191 (52%), Gaps = 4/191 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + A+ G+R+R+ +KL+QIN+K+ L+ ++DL ++PG W QVAA+
Sbjct: 11 RKDVHYYMAKEYGYRSRACFKLIQINKKYGFLEKANAVIDLCAAPGGWLQVAAKFCPVTC 70
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-IRQAIGGNPDLVLSDMAYPTIGHRK 152
+ +D++ ++PI GVK + D +++ R+ GG D+VL+D A + +
Sbjct: 71 TK---IGLDLVPIKPIPGVKTYVQDITAPVTYQLLKRELKGGKADVVLNDGAPNVGANWQ 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
D + L AA A+ L GG F+ K F+ N ++ + K F+K+ KP ASR
Sbjct: 128 KDAFNQIELTLAALKLAVNFLRRGGTFVTKVFRSKDYNALIWVCNKFFRKIEANKPKASR 187
Query: 213 AESVEMFLLAK 223
S E+F++
Sbjct: 188 FTSAEIFIVCT 198
>gi|225619180|ref|YP_002720406.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Brachyspira
hyodysenteriae WA1]
gi|259494561|sp|C0QX75|RLME_BRAHW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|225213999|gb|ACN82733.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Brachyspira
hyodysenteriae WA1]
Length = 193
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 6/196 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ + D Y ++A+ E ++ARS +KL + K + ++++ ++D+G SPGS+SQ
Sbjct: 2 KKVQDFYFKKAKEENYKARSVFKLEEAQNKFKFIKASDNVLDVGCSPGSFSQYMLNKILK 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ + V + + F D D+D D+V+SD T R
Sbjct: 62 SG--SVVGVDILPNSFAHQRFTFILGDIKDMDV----TTFNNTLFDVVVSDAMPNTTSDR 115
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
+ +H R++SLC + A E+L G+F +K F G D L ++F V KP +S
Sbjct: 116 ETNHFRSISLCRSIFDLAKEVLKENGNFFIKVFDGKDLQDFKKELSEYFNSVNVFKPKSS 175
Query: 212 RAESVEMFLLAKGFRK 227
R ES E+FL K F+K
Sbjct: 176 RDESREIFLFCKNFKK 191
>gi|323450630|gb|EGB06510.1| hypothetical protein AURANDRAFT_5019 [Aureococcus anophagefferens]
Length = 180
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 63/183 (34%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
++A+ E +RARSAYKL+ ++++ +L + R+VDL ++PGSW QV R + A V
Sbjct: 1 YRKAKEEKFRARSAYKLMDVDDEFHLLANAARVVDLCAAPGSWCQVLRRRCPAGAA---V 57
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRT 158
VA+D+ M P+ GV + D ++ + A GG D+V+ D A G +D
Sbjct: 58 VAVDLQPMAPLDGVVVLRGDITTPETAAAVVAAAGGPADVVVCDGAPEVTGVHDVDEFAH 117
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
SL AA A +L GG F+ K F+ + L+ F V KP +SR SVE
Sbjct: 118 ASLMAAAAALAARLLRPGGAFVAKLFRCTDAALVEAQLRCLFVDVDVRKPASSRDRSVEA 177
Query: 219 FLL 221
F++
Sbjct: 178 FVV 180
>gi|42527473|ref|NP_972571.1| cell division protein FtsJ [Treponema denticola ATCC 35405]
gi|81831375|sp|Q73L97|RLME_TREDE RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|41818058|gb|AAS12482.1| cell division protein FtsJ [Treponema denticola ATCC 35405]
gi|325473730|gb|EGC76919.1| ribosomal RNA large subunit methyltransferase J [Treponema
denticola F0402]
Length = 199
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 62/191 (32%), Positives = 97/191 (50%), Gaps = 2/191 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + ++A E + ARS YKL ++N+K + N +++DLG++PGSW+ R
Sbjct: 10 DYWSKKAFAENYPARSVYKLEEMNKKFNLFSPNDKVLDLGAAPGSWTVYVLRFLNKEGRV 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
T V + + FF+ D D + +++ G D V+ D A T G++ +D
Sbjct: 70 TAVDLKPLDSSVYDERLNFFQGDMFDKGIIKSVKEL--GPYDAVICDAAPATTGNKTVDT 127
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
R+ L E A ++A E L GG F+VK FQGG L L+K F+ KP A R+ S
Sbjct: 128 ARSSGLVELALYYAQEQLKQGGSFVVKIFQGGDQQIHLNNLRKCFKTARAFKPEACRSSS 187
Query: 216 VEMFLLAKGFR 226
E +L+ F+
Sbjct: 188 FETYLIGLDFK 198
>gi|323456843|gb|EGB12709.1| hypothetical protein AURANDRAFT_52052 [Aureococcus anophagefferens]
Length = 947
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-SNRRIVDLGSSPGSWSQVAARITGSN 92
ND + A+ +G+R+R+A+KL IN++ I+ R ++DL ++PG W+QVAA+ +
Sbjct: 13 RNDKWYVLAKEQGYRSRAAFKLAHINKEFDIIGAKTRVVLDLCAAPGGWAQVAAK---AA 69
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG----------------GNP 136
V+A+D+L + PI V+ D + + +++ +
Sbjct: 70 GRGAAVIAVDLLPIRPIPNVRTIVGDITMDTTHQHVKREAREALAKFRDDDGEGRAGRHV 129
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML-NIGGDFLVKTFQGGTTNDILCL 195
D+VL D A D + A +E GG F+ K ++G N +
Sbjct: 130 DVVLCDGAPNVGAAYNKDAFVQNEIALLALKCGVECGLRRGGSFVTKVYRGQDYNALTWA 189
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ F++V KP +SRA+S E+F++ G+
Sbjct: 190 FGRLFERVRATKPASSRAQSAEIFVVCSGY 219
>gi|302336841|ref|YP_003802047.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Spirochaeta smaragdinae
DSM 11293]
gi|301634026|gb|ADK79453.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Spirochaeta smaragdinae
DSM 11293]
Length = 203
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
R D Y Q A+ EG+ ARS YKL +I ++ ++ + I+D+G++PGSWS +R+
Sbjct: 5 KRATADYYSQLAKKEGYPARSIYKLEEIEKRFGVINTELPILDVGAAPGSWSLFISRLIK 64
Query: 91 SNANNTRVVAIDILDMEPIL--GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTI 148
+ +V++D+ +M G+ D D+++ IR G ++SD A T
Sbjct: 65 AKGLQPTIVSVDLKEMTVSKKSGITVITGDAFAGDAYQSIRGM--GPYGTIVSDAAPATT 122
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G+R +D R+ SL + A E+L GG+ +VK FQGG +++ +++ F ++ +KP
Sbjct: 123 GNRIVDTGRSFSLASSVITLAEELLAPGGNLVVKIFQGGDEQELMEMVRSRFSQLKTLKP 182
Query: 209 VASRAESVEMFLLAKGFR 226
A R +S E +L+ +
Sbjct: 183 KACRKDSFETYLIGLRKK 200
>gi|254796904|ref|YP_003081741.1| ribosomal RNA large subunit methyltransferase J [Neorickettsia
risticii str. Illinois]
gi|254590140|gb|ACT69502.1| ribosomal RNA large subunit methyltransferase J [Neorickettsia
risticii str. Illinois]
Length = 186
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 5/187 (2%)
Query: 40 QRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVV 99
++A+ E +R+R+AYK L+IN+K +++ +++LGS+PG WSQV A R++
Sbjct: 2 KKAKAEQYRSRAAYKFLEINKKFNLIREGSVVLELGSAPGGWSQVIANALN---GTGRLI 58
Query: 100 AIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
A+D+ DM+PI GV+ K D E G D+++SD+A G R D + ++
Sbjct: 59 AVDLADMDPIPGVEVIKLDIELQR-KELYEYISGVELDVIVSDLAPSASGSRVTDSISSI 117
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTN-DILCLLKKHFQKVIHVKPVASRAESVEM 218
L E +A L G ++K +G + LKK F+K+ + KP ASR S E+
Sbjct: 118 RLAELVLEYAKSSLKKFGTVVIKILRGSEDEYRFVNSLKKKFKKIEYFKPDASRKASREI 177
Query: 219 FLLAKGF 225
+L+ G
Sbjct: 178 YLIFLGK 184
>gi|296127776|ref|YP_003635028.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Brachyspira murdochii
DSM 12563]
gi|296019592|gb|ADG72829.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Brachyspira murdochii
DSM 12563]
Length = 193
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ + D Y ++A+ E ++ARS +KL + K + ++S+ ++D+G SPGS+SQ
Sbjct: 2 KKVQDFYFKKAKEENYKARSVFKLEEAQNKFKFIKSSDTVLDVGCSPGSFSQYMLNKILK 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ V + + F D D+D+ D+V+SD T R
Sbjct: 62 TG--SVVGVDILPNSFAHQRFTFMLGDIKDMDA----SSFNNTLFDVVVSDAMPNTTSDR 115
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
+ +H R++SLC A A ++L G F +K F G L +F+ V KP +S
Sbjct: 116 ETNHFRSVSLCRAIFNLAKDVLKENGHFFIKVFDGKDLQMFKKELSGYFESVNVFKPKSS 175
Query: 212 RAESVEMFLLAKGFRK 227
R ES E+FL K F+K
Sbjct: 176 RDESREVFLFCKNFKK 191
>gi|312076873|ref|XP_003141055.1| hypothetical protein LOAG_05470 [Loa loa]
gi|307763781|gb|EFO23015.1| hypothetical protein LOAG_05470 [Loa loa]
Length = 335
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y + A+ EGWRAR + R+VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIYYRLAKEEGWRAR----------------NVHRVVDLCAAPGSWSQVLSKKVY 48
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
+ R+VA+D+ M P+ GV + D + + E I G DLV+ D A
Sbjct: 49 FAEDEGRRKDIRIVAVDLQPMSPLPGVIQLQGDITETSTAEKIISYFEGLKADLVVCDGA 108
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G +D L AA A +L G F+ K F+ + LK F++V
Sbjct: 109 PDVTGLHALDEYMQSQLVLAALNIATFVLKETGTFVAKVFRARDITLLYAQLKIFFKEVY 168
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP +SR S E F++ K F
Sbjct: 169 CAKPRSSRQSSCEAFVVCKEF 189
>gi|159466440|ref|XP_001691417.1| hypothetical protein CHLREDRAFT_183158 [Chlamydomonas reinhardtii]
gi|158279389|gb|EDP05150.1| predicted protein [Chlamydomonas reinhardtii]
Length = 254
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 22/220 (10%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
W + +D Y + A+ G+ +R+AYKLL+I +KH+I++ ++DLG SPG+W QVA +
Sbjct: 28 WTKKVQHDHYFKEAKKAGYVSRAAYKLLEIQDKHKIIKQGGTVLDLGCSPGAWLQVACQQ 87
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI----RQAIGGNPDLVLSDMA 144
G V+ +DI + + + D+ + G D VLSDM
Sbjct: 88 IGPRERGGTVLGVDIQPVTVPERFCDARVRVMQADARTLPPSLLAEYAPGGFDTVLSDML 147
Query: 145 YPTIGHRKID------------------HLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
T G ++ + + + F L GG ++K ++G
Sbjct: 148 QFTSGVNDVELSLELAGTALHIATGYHFDVYGEAYVQQVGFRHTGFLRPGGALVMKVYEG 207
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ + ++++F KV+ ++ ASR+ S E + + G +
Sbjct: 208 TGVTEFVRDMQRYFTKVVRMRVDASRSMSREFYAVGLGRK 247
>gi|296416047|ref|XP_002837692.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633575|emb|CAZ81883.1| unnamed protein product [Tuber melanosporum]
Length = 354
Score = 131 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 69/253 (27%), Positives = 103/253 (40%), Gaps = 55/253 (21%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
W R I D + A+ + ++R+ YKL++++ KH I + +VDLG +PG+WSQVA
Sbjct: 92 NQWKRRQIRDVFATAAKRDDMKSRAGYKLIELDYKHGIFGPGQTVVDLGFAPGAWSQVAI 151
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA--------------- 131
RV+ +DIL P GV F+ E +++
Sbjct: 152 DKVTPE---GRVIGVDILPANPPPGVSTFQGSMKSPGVRELLKKFLMDPSRGKMRENRYL 208
Query: 132 -------------------------------------IGGNPDLVLSDMAYPTIGHRKID 154
G D+VLSDM T G D
Sbjct: 209 RKGDVDEEELEEMERGYLDRERDAEREEKFEGVGEDDTRGPVDVVLSDMLMNTSGIPVRD 268
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
H ++ LC A FA+++L G F+ K + G ++ LK F V KP ASR E
Sbjct: 269 HAYSIDLCYTAMSFAMDVLKTSGVFVCKVYSGDQECELKAKLKLMFSTVYCDKPEASRTE 328
Query: 215 SVEMFLLAKGFRK 227
S E++ ++K RK
Sbjct: 329 SREVYYVSKLLRK 341
>gi|15240727|ref|NP_196887.1| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
gi|5821280|dbj|BAA83750.1| FtsJ [Arabidopsis thaliana]
gi|10177649|dbj|BAB11111.1| FtsJ [Arabidopsis thaliana]
gi|332004564|gb|AED91947.1| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
Length = 224
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 26/217 (11%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + AQ G+ ARSA+KLLQI +++++++ ++DLG +PG+W QVA + G +
Sbjct: 8 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLRSG 67
Query: 96 TRVVAIDILDMEPILG----VKFFKFDFLDLDSWEFIRQAIGG-NPDLVLSDMAYPTIGH 150
VV +DI ++ V+ D L+ + + ++LSDM + G
Sbjct: 68 GIVVGMDIKKVKVPPQCDSRVQTIAADVLNFPRQKIRELSPQQLGFSVILSDMCHSVSGI 127
Query: 151 RKIDHLRTMSLCEAATFFALEML---------------------NIGGDFLVKTFQGGTT 189
D + L A A+ GG ++K +
Sbjct: 128 TTRDAALSAELGMRALDLAVGQAAISQSPNDDDGGPNESRPGVLRHGGHLVIKLLESEDA 187
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
D + K F K ++P A+R S E++L+ +GFR
Sbjct: 188 QDFARICKPIFNKASWLRPKATRPSSREIYLICQGFR 224
>gi|312136699|ref|YP_004004036.1| 23S rRNA um-2552 2'-o-methyltransferase [Methanothermus fervidus
DSM 2088]
gi|311224418|gb|ADP77274.1| 23S rRNA Um-2552 2'-O-methyltransferase [Methanothermus fervidus
DSM 2088]
Length = 203
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/199 (31%), Positives = 112/199 (56%), Gaps = 1/199 (0%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
+ W + D Y + A+ E + +R+AYKL+Q+N+K ++++ ++DLG++PG WSQVA
Sbjct: 3 KRWWRQRKKDYYYRLAKKEKYYSRAAYKLIQLNKKFKLIRRGNVVLDLGAAPGGWSQVAI 62
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
++ GS V + ++ F + DF D + I++ G D+++SD +
Sbjct: 63 KLVGSKGKVVAVDIKKMKPLKY-ENFSFIQGDFTDPKIQKKIKEITEGGVDVIISDASPS 121
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G + +DH+R++ LC++ A +L GG+ +VK FQG ++L LK F+ V
Sbjct: 122 LSGIKDLDHIRSIELCKSVINIAKNVLKRGGNLVVKVFQGPEFKNLLDELKNEFKYVKAS 181
Query: 207 KPVASRAESVEMFLLAKGF 225
KP +S S E++++AK F
Sbjct: 182 KPPSSEKSSAEIYVVAKYF 200
>gi|262277409|ref|ZP_06055202.1| ribosomal RNA large subunit methyltransferase J [alpha
proteobacterium HIMB114]
gi|262224512|gb|EEY74971.1| ribosomal RNA large subunit methyltransferase J [alpha
proteobacterium HIMB114]
Length = 205
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 6/197 (3%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
W+ RH ND V +A+ G+R+R+ +KL +IN K L N+ I+DLG++PGSWSQ ++
Sbjct: 15 RWIQRHHNDDLVNKARKLGYRSRAIFKLEEINNKFLFLNKNKNILDLGAAPGSWSQYLSK 74
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPT 147
+++AID+L+M + VKF DF + D + I + + +SD+A T
Sbjct: 75 Q-----GFKKIIAIDVLEMNNVSNVKFILGDFTNEDIKKKIFEQFKKIDII-ISDIATNT 128
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
G++K+D +T S+C FA + G L K F G DI+ + +F K +K
Sbjct: 129 TGNKKLDSFKTNSICLDVLDFANKNFENDGCVLAKYFNGELDKDIIEFSRNNFSKSKIIK 188
Query: 208 PVASRAESVEMFLLAKG 224
P +SR +S EM++ A+
Sbjct: 189 PKSSRKDSKEMYVFAQK 205
>gi|308801797|ref|XP_003078212.1| elongation factor P (ISS) [Ostreococcus tauri]
gi|116056663|emb|CAL52952.1| elongation factor P (ISS) [Ostreococcus tauri]
Length = 475
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ + DP + A+ G+ ARSA KL+Q++EK ++L++ R ++DLG +PG+W QV T
Sbjct: 265 SKRLIDPIAREAKRLGYVARSALKLVQLDEKFRLLRNKRSVLDLGCAPGAWIQVVHERTR 324
Query: 90 GSNANNTRVVAIDILDMEP--ILGVKFFKFDFLDLDSWEFIR----QAIGGNPDLVLSDM 143
RV+ ID+ +++ + G++ + + D VLSDM
Sbjct: 325 RQGGTCARVLGIDLKEIDRGTLAGLRHVDAARASTMTLDATEARASDLGVETFDAVLSDM 384
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEM----LNIGGDFLVKTFQGGTT-NDILCLLKK 198
T G +D ++ L E A A+ L GD +VK +G + ++ K
Sbjct: 385 MVNTRGLASVDAAASLELAECAVDLAVVRDGGVLAARGDLVVKILEGSGSVEELAKHCKP 444
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
HF KV KP A+R+ES E++L+A+G +
Sbjct: 445 HFDKVNWFKPNATRSESREIYLVARGRK 472
>gi|307719842|ref|YP_003875374.1| hypothetical protein STHERM_c21720 [Spirochaeta thermophila DSM
6192]
gi|306533567|gb|ADN03101.1| hypothetical protein STHERM_c21720 [Spirochaeta thermophila DSM
6192]
Length = 194
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 103/192 (53%), Gaps = 3/192 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
+D Y ++A+ EG+ ARS YKL++I +K++I+ R++DLG++PGSWS+ G
Sbjct: 5 DDYYTRKAKREGYPARSVYKLMEIQQKYRIVSPGDRVLDLGAAPGSWSKYLLSCVGEKGL 64
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V + L + + F++ DF + E + +++SD A T G+R +D
Sbjct: 65 VVAVD-LLPLVIGSHERLVFYQGDFTSDEVQERVDVHAP--FQVIVSDAAPSTSGNRGLD 121
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R+ +L E A L GG+ + K FQG +I +++ +++ V+P A+R +
Sbjct: 122 TARSEALVEGILSLAGRWLVPGGNLVAKLFQGSGAQEIFRAVREGWERAYFVRPRATRRQ 181
Query: 215 SVEMFLLAKGFR 226
S E+F++ G R
Sbjct: 182 SFEVFVVGVGRR 193
>gi|261330264|emb|CBH13248.1| ribosomal RNA methyltransferase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 255
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR--IVDLGSSPG 79
+ R W+ + DP+V A+ G+ ARSA+KLL++++K + +VD+G SPG
Sbjct: 9 RRHGGRQWMQQQSRDPFVLEARRRGYVARSAFKLLEMDDKFTLFSRGNTRVVVDIGCSPG 68
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-----GG 134
SW QV G + + G + DF + E + + G
Sbjct: 69 SWLQVIRERCG--DKCAVFGVDVLRVASTVTGAVCIQGDFTNPAVREELLARMLTVRAVG 126
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT-TNDIL 193
D+V SDM D + L +A FALE L GG+F+ K T D+
Sbjct: 127 VVDVVTSDMCLNRGTGSTSDRQKQEELNRSALAFALEQLVPGGNFVCKVLGSPTAYEDLR 186
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ F + KP +SR S E F++ +G R+
Sbjct: 187 RDTCRWFVRTDICKPSSSRLTSDEAFMVCRGKRE 220
>gi|322827301|gb|EFZ31545.1| ribosomal RNA methyltransferase, putative [Trypanosoma cruzi]
Length = 253
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 8/215 (3%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN--RRIVDLGSS 77
+ + R W+ + DP+V A+ G+ ARSA+KLL++++K + N R +VD+G S
Sbjct: 7 KYLRQGGRQWMEKQARDPFVLEARRRGYVARSAFKLLEMDDKFGLFARNHTRVVVDIGCS 66
Query: 78 PGSWSQVAARITGSNANNTRVVAIDILDM----EPILGVKFFKFDFLDLDSWEFIRQAIG 133
PG W QVA G V + + I G F
Sbjct: 67 PGGWLQVARERCGDRCALFGVDLLHVSPTVTGAVCIQG-DFTDMAIQQQLLLRMENVHAN 125
Query: 134 GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT-TNDI 192
G D+V+SDM D + M L A FA L GG+F+ K T ++
Sbjct: 126 GLVDVVMSDMCLNRGSGGTDDRQKQMQLNMEALAFATSQLRTGGNFVCKVLGTPTAFEEL 185
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L++ F + KP +SR S E F++ R+
Sbjct: 186 RGELQRWFVRSTLCKPFSSRRGSDEAFMVCLAKRE 220
>gi|134107752|ref|XP_777487.1| hypothetical protein CNBB0610 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260179|gb|EAL22840.1| hypothetical protein CNBB0610 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 254
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 82/234 (35%), Positives = 118/234 (50%), Gaps = 34/234 (14%)
Query: 27 RDWLNRHINDPYVQRA-------QLEGWRARSAYKLLQINEKHQIL-QSNRRIVDLGSSP 78
WL R DPYV++ +R+RS++KL+ + + H IL + + +VDLG++P
Sbjct: 15 NRWLTRQSRDPYVRQRTGTSSSPSQPSYRSRSSFKLVSLAKSHPILSRETKSVVDLGAAP 74
Query: 79 GSWSQVAARITGSNANNT---RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-- 133
G WSQVAA + G + T RV AIDIL M+PI V+ + DFL E ++ +G
Sbjct: 75 GGWSQVAAHLLGVDKKPTSKPRVWAIDILPMDPIPAVQTLQGDFLSSSVRETLQSLVGTP 134
Query: 134 ---GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN---------------- 174
G D VLSDM P G R D ++ LC AAT FA +L
Sbjct: 135 ESGGGVDTVLSDMMAPMTGVRTRDVGLSLELCAAATVFARGVLKQASKEDEVKVVKGKKV 194
Query: 175 -IGGDFLVKTFQGGTTNDILCL-LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG+ ++K F ++ L L + F KV+ KP SR+ES E + + GF+
Sbjct: 195 WPGGNLVMKFFAHPDLDEFRKLELDRWFGKVVVEKPKESRSESSEAYWVCLGFK 248
>gi|149243225|pdb|2PLW|A Chain A, Crystal Structure Of A Ribosomal Rna Methyltransferase,
Putative, From Plasmodium Falciparum (Pf13_0052)
Length = 201
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 20/198 (10%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD 105
+R+R+AYKL++++ K+ L+ N+ I+D+G PGSW QV T + N +++ ID
Sbjct: 1 NYRSRAAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKN--KIIGIDKKI 58
Query: 106 MEPILGVKFFKFDFLDLDS------------------WEFIRQAIGGNPDLVLSDMAYPT 147
M+PI V F + + + ++ D++LSD A P
Sbjct: 59 MDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPC 118
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
IG++ DHL + L + T F + +NIGG ++VK + G TN++ LK FQ V K
Sbjct: 119 IGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGMFQLVHTTK 178
Query: 208 PVASRAESVEMFLLAKGF 225
P ASR ES E++L+ K F
Sbjct: 179 PKASRNESREIYLVCKNF 196
>gi|13541120|ref|NP_110808.1| methyltransferase involved in cell division [Thermoplasma volcanium
GSS1]
gi|74576058|sp|Q97C13|RLME_THEVO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|14324507|dbj|BAB59434.1| cell division protein [FtsJ] [Thermoplasma volcanium GSS1]
Length = 197
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y +A+ E R+R+A+KL + +++++++ ++++GSSPG W+QV +
Sbjct: 5 RRDEYYWKAKKEQLRSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLAR--- 61
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI----RQAIGGNPDLVLSDMAYPTIG 149
++++ID+ +ME I GV+F + D ++ I R+ D V+SD G
Sbjct: 62 ---KIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSG 118
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
DH + + + A+ L GG+ L+K FQG TND + + +K+F KP
Sbjct: 119 IPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNFSSYKISKPP 178
Query: 210 ASRAESVEMFLLAKGFR 226
ASR S E++++ GF+
Sbjct: 179 ASRGSSSEIYIMFFGFK 195
>gi|212529056|ref|XP_002144685.1| tRNA methyltransferase, putative [Penicillium marneffei ATCC 18224]
gi|210074083|gb|EEA28170.1| tRNA methyltransferase, putative [Penicillium marneffei ATCC 18224]
Length = 429
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 63/276 (22%), Positives = 99/276 (35%), Gaps = 81/276 (29%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP------- 78
++ D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 5 SKDKRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHADPDSVTRVVDLCAAPGSWSQVL 64
Query: 79 ---------GSWSQVAARITGSNA---------------------------------NNT 96
+ N
Sbjct: 65 SRVLIKGESFGRRAWLEKRRRDKKALEKLEKESKNTETTTEEDSDDTEDESAILKPRKNV 124
Query: 97 RVVAIDILDMEPILGVKFFKFDFLDLDSWE---------------------------FIR 129
++VAID+ M P+ G+ K D + +
Sbjct: 125 KIVAIDLQPMAPLEGITMMKADITHPSTIPLLLRALDPEYYEGESGKQDPTIEPTTTKLP 184
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
DLV+SD A G +D L AA A+ +L GG F+ K F+G
Sbjct: 185 SRHPHPVDLVISDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDV 244
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ + L+ F+KV KP +SRA S+E F++ +GF
Sbjct: 245 DLLYAQLRTVFEKVSVAKPRSSRASSLEAFVVCEGF 280
>gi|300869923|ref|YP_003784794.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Brachyspira pilosicoli
95/1000]
gi|300687622|gb|ADK30293.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Brachyspira pilosicoli
95/1000]
Length = 194
Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 6/196 (3%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ + D Y ++A+ E ++ARS +KL + K + ++S+ ++D+G SPGS+SQ
Sbjct: 2 KKVQDFYFKKAKEENYKARSVFKLEEAQNKFKFIKSSDNVLDVGCSPGSFSQYMLNKIIK 61
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ V + +D +++ I D+V+SD T R
Sbjct: 62 TGSVVGVDILPNNFSHQRFKFILGDIKEMDASTFDNIE------FDVVVSDAMPNTTSDR 115
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVAS 211
+ +HLR++ LCE + A ++L G+F +K F G + L +F V KP +S
Sbjct: 116 ETNHLRSIGLCEKIFYLAKDVLKDNGNFFIKVFDGKDLPNFKKELNDYFDSVTVFKPKSS 175
Query: 212 RAESVEMFLLAKGFRK 227
R ES E+FL AKGF+K
Sbjct: 176 RDESREVFLFAKGFKK 191
>gi|328873742|gb|EGG22109.1| rRNA methyltransferase [Dictyostelium fasciculatum]
Length = 366
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 47/266 (17%)
Query: 6 GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL 65
+++ RG+ + ++ + S + W+ R + D +V A+ E + +R+A+KL +I++K +IL
Sbjct: 66 SAAATRGILPRSIAKNLRTSDK-WVKRQMCDRFVSMAREENYVSRAAFKLEEIDDKFKIL 124
Query: 66 QSNRRIVDLGSSPGSWSQVAARITG----------------------------------- 90
+ I+DLG+SPG +SQVA +
Sbjct: 125 KYGSTIIDLGASPGGFSQVAQKRCYFQTINTTLKSSTTNKNNQQNNQNQLKKRKGLVISV 184
Query: 91 --SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL-------VLS 141
+ + + F DF + + IRQ + N V+S
Sbjct: 185 DINGEKFELYQSEEEGIAIEDRYTNFICGDFKLASTKQQIRQLLALNNKKTIASVDAVIS 244
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFAL--EMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
DMA G + +DH R +SL A FA+ +L GG F+ K +GG N + +K H
Sbjct: 245 DMAPSYCGVQSLDHDRLISLASDAFEFAISGNILKKGGSFVCKVSRGGQENLLFQRIKSH 304
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
FQ V KP ASR ES E+F +A F
Sbjct: 305 FQTVKSFKPKASRQESTEIFFVALNF 330
>gi|71403252|ref|XP_804446.1| ribosomal RNA methyltransferase [Trypanosoma cruzi strain CL
Brener]
gi|70867422|gb|EAN82595.1| ribosomal RNA methyltransferase, putative [Trypanosoma cruzi]
Length = 296
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 67/261 (25%), Positives = 108/261 (41%), Gaps = 65/261 (24%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR---IVDLGSSPGSWSQVAAR 87
++ D Y ++A+ EG+RARSAYKLLQ++E+ IL + +VDL ++PGSWSQ+ AR
Sbjct: 5 SKDKRDIYYRKAKEEGYRARSAYKLLQLHEEFNILNRDDIQTGVVDLCAAPGSWSQLLAR 64
Query: 88 IT---------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF----------- 127
++ R+VA+D+ +M PI GV+ + D +
Sbjct: 65 HLREEVGGRTEKRSSGAPRIVAVDLQEMMPIEGVQLLQGDITSEATAREIIRLLNIKEDT 124
Query: 128 ------------------------------------------IRQAIGGNPDLVLSDMAY 145
+ DLV+ D A
Sbjct: 125 ASVNDAYVDSEEDKFAIQTDKGGRSTARRPSLAPGGRKSYSDHTNSCEKKADLVVCDGAP 184
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
G ++D L AA +L GG F+ K F+G T ++ + F+ VI
Sbjct: 185 DVTGMHELDEYLQHHLLLAALNITTFVLRCGGTFVTKIFRGPNTPFLVAKSEVFFRHVII 244
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 245 AKPRSSRNASMEAFMVCQDYQ 265
>gi|328949039|ref|YP_004366376.1| ribosomal RNA large subunit methyltransferase E [Treponema
succinifaciens DSM 2489]
gi|328449363|gb|AEB15079.1| Ribosomal RNA large subunit methyltransferase E [Treponema
succinifaciens DSM 2489]
Length = 220
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 101/191 (52%), Gaps = 2/191 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + Q+A EG+ ARS YKL +I+EK +L+ + I+DLG++PGSW+ R +
Sbjct: 31 DYWSQKAFKEGYPARSVYKLQEIDEKFGMLKKSSIILDLGAAPGSWTVWLLRNIKQSGKV 90
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
V + + FF+ D L + I++ G DLV+ D A T G+R ID
Sbjct: 91 VSVDLNPLSKDVKAENLVFFQGDLLSEEIRNLIKE--QGPYDLVVCDAAPLTTGNRTIDT 148
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
LR+ +L E A ++A ML GG+F VK FQ G +L +++ F + KP A R ES
Sbjct: 149 LRSKALVEMAIWYAGAMLKTGGNFCVKIFQNGDQQKLLMKMREIFTQAKGFKPEACRTES 208
Query: 216 VEMFLLAKGFR 226
E +L+ +
Sbjct: 209 FETYLIGLNKK 219
>gi|327302420|ref|XP_003235902.1| tRNA methyltransferase [Trichophyton rubrum CBS 118892]
gi|326461244|gb|EGD86697.1| tRNA methyltransferase [Trichophyton rubrum CBS 118892]
Length = 341
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 33/216 (15%)
Query: 44 LEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSPGSWSQVAARITGSNANNT-- 96
+ WRARSA+KL+ ++E+ + S RR+VDL ++PGSWSQV +R+ +
Sbjct: 51 EQNWRARSAFKLIHLDEEFDLFAHSDPDSVRRVVDLCAAPGSWSQVLSRVLIRGESFGRR 110
Query: 97 ---------------------RVVAIDILDMEPILGVKFFKFDFLDLDSW-----EFIRQ 130
++V++D+ M P+ G+ + D + +
Sbjct: 111 QYELDRGAGCVDEDVQPRRDVKIVSVDLQPMAPLEGIITLQADITHPSTVPLLLNALNDE 170
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
DLVLSD A G +D L AA A+ +L GG F+ K F+G +
Sbjct: 171 GEEEKVDLVLSDGAPDVTGLHDLDIYVQSQLLYAALNLAMGILRPGGTFVAKIFRGRDVD 230
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ LK F +V+ KP +SRA S+E F++ + ++
Sbjct: 231 VLYAQLKSVFGRVVVAKPRSSRASSLEAFVVCRDYK 266
>gi|71668248|ref|XP_821060.1| ribosomal RNA methyltransferase [Trypanosoma cruzi strain CL
Brener]
gi|70886427|gb|EAN99209.1| ribosomal RNA methyltransferase, putative [Trypanosoma cruzi]
Length = 390
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 66/261 (25%), Positives = 106/261 (40%), Gaps = 65/261 (24%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR---IVDLGSSPGSWSQVAAR 87
++ D Y ++A+ EG+RARSAYKLLQ++E+ IL + +V L ++PGSWSQ+ AR
Sbjct: 5 SKDKRDIYYRKAKEEGYRARSAYKLLQLHEEFNILNRDEIQTGVVVLCAAPGSWSQLLAR 64
Query: 88 IT---------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF----------- 127
+ R+VA+D+ +M PI GV+ + D +
Sbjct: 65 HLREEVGGRTEKQSLGAPRIVAVDLQEMMPIEGVQLLQGDITSEATAREIIRLLNIKEDT 124
Query: 128 ------------------------------------------IRQAIGGNPDLVLSDMAY 145
+ DLV+ D A
Sbjct: 125 ASVNDAYVDSEEDKSAIQTDKGGRSTARRPSLAPGGRNSYSDHTNSCEKKADLVVCDGAP 184
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
G ++D L AA +L GG F+ K F+G T ++ + F+ VI
Sbjct: 185 DVTGMHELDEYLQHHLLLAALNITTFVLRCGGTFVTKIFRGPNTPFLVAKSEVFFRHVII 244
Query: 206 VKPVASRAESVEMFLLAKGFR 226
KP +SR S+E F++ + ++
Sbjct: 245 AKPRSSRNASMEAFMVCQDYQ 265
>gi|48477697|ref|YP_023403.1| FtsJ-like methyltransferase [Picrophilus torridus DSM 9790]
gi|74567879|sp|Q6L1E2|RLME_PICTO RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|48430345|gb|AAT43210.1| FtsJ-like methyltransferase [Picrophilus torridus DSM 9790]
Length = 194
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 9/195 (4%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y RA+ E +R+R++YK+++IN K+ I+ +++ GSSPG W+QV IT
Sbjct: 3 RKDKYYIRAKRENYRSRASYKIIEINNKYNIVSRGDNVLEFGSSPGGWTQVIENIT---- 58
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE----FIRQAIGGNPDLVLSDMAYPTIG 149
+ ++A+DI M+P+ F K + D D ++ + + N D +LSD T G
Sbjct: 59 -QSVIIAVDINRMDPVKNTVFIKMNIFDDDIFKSIDHAMAENNIKNFDSILSDAMSRTSG 117
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
DH + +CE ++ L GG+ ++K FQG TN+ + +F KP
Sbjct: 118 IEDRDHYNSYKICERVMDISIPRLKNGGNIILKQFQGDMTNEFIKKWSGYFNYYKITKPK 177
Query: 210 ASRAESVEMFLLAKG 224
ASR S E++++
Sbjct: 178 ASRQHSREIYIIFLN 192
>gi|71665009|ref|XP_819479.1| ribosomal RNA methyltransferase [Trypanosoma cruzi strain CL
Brener]
gi|70884782|gb|EAN97628.1| ribosomal RNA methyltransferase, putative [Trypanosoma cruzi]
Length = 253
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 10/216 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN--RRIVDLGSS 77
+ + R W+ + DP+V A+ G+ ARSA+KLL++++K + N R +VD+G S
Sbjct: 7 KYLRQGGRQWMEKQARDPFVLEARRRGYVARSAFKLLEMDDKFGLFARNHTRVVVDIGCS 66
Query: 78 PGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
PG W QVA G + + G + DF D+ + + +
Sbjct: 67 PGGWLQVARERCG--DRCALFGVDLLHVSPAVTGAVCIQGDFTDMAIQQQLLSRMENVHA 124
Query: 137 ----DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT-TND 191
D+V+SDM D + M L A FA L GG+F+ K T +
Sbjct: 125 NGLVDVVMSDMCLNRGSGGTDDRQKQMQLNMEALAFATSQLRTGGNFVCKVLGTPTAFEE 184
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ L++ F + KP +SR S E F++ R+
Sbjct: 185 LRGELQRWFVRSTLCKPFSSRRGSDEAFMVCLAKRE 220
>gi|149919181|ref|ZP_01907664.1| cell division protein FtsJ [Plesiocystis pacifica SIR-1]
gi|149819895|gb|EDM79317.1| cell division protein FtsJ [Plesiocystis pacifica SIR-1]
Length = 209
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 3/196 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ +DP RA+ E + R+ YKL +I+++ ++++ R++DLG PGSW Q A + G
Sbjct: 4 KKNRHDPNYLRAKRENFAGRAIYKLEEIDKRFRLIKPGARVLDLGCWPGSWLQYAVKRAG 63
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
++A V + ++ VK F D L + + + G D+VLSDMA T G+
Sbjct: 64 TDATLVGVDLKAV-ELALPSNVKTFVGDVNKLKLDKMVERF--GRFDVVLSDMAPNTTGN 120
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
+ D + L A A IGG F K FQG ++++ +++ +Q+ +
Sbjct: 121 KDFDIPVSEDLFLRALDIATGCSRIGGHFCAKVFQGARFHELIREVERRYQQAKPYRSAH 180
Query: 211 SRAESVEMFLLAKGFR 226
+R +S E +++ +G +
Sbjct: 181 TRKQSREQYIIGRGLK 196
>gi|171677887|ref|XP_001903894.1| hypothetical protein [Podospora anserina S mat+]
gi|170937012|emb|CAP61670.1| unnamed protein product [Podospora anserina S mat+]
Length = 336
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 75/257 (29%), Positives = 114/257 (44%), Gaps = 61/257 (23%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS--NRRIVDLGSSPGSWSQVAA 86
W R D + A+++G R+R+A+KLL++ EK+ + + N+ +VDLG +PGSWSQVA
Sbjct: 59 WKQRQSRDRFALAARVQGLRSRAAFKLLEMQEKYSLFRPRRNQIVVDLGYAPGSWSQVAL 118
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDL------------------------ 122
T + +V+ ID+L +P GV + +FL
Sbjct: 119 DATAPD---GKVIGIDLLPAQPPKGVSTIQGNFLSKAVQEMCKNFVLEADLKRRKMERRR 175
Query: 123 -DSWEFIRQAIGGNPDL-------------------------------VLSDMAYPTIGH 150
+ + + G + VLSDM T G
Sbjct: 176 EWAAKKSIEIDEGEVEERGSYIDLERRSAQQEEELEQEKGMNMRVVDVVLSDMLMNTSGI 235
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
DH +M LC+AA FA E L G F+ K ++G +++ +LKK F KV KP++
Sbjct: 236 SLRDHAGSMELCKAALTFASETLKPDGHFVCKYYEGSGDDELKMVLKKMFAKVHREKPMS 295
Query: 211 SRAESVEMFLLAKGFRK 227
SR ES E F +A R+
Sbjct: 296 SRKESREAFYVALRRRE 312
>gi|71656457|ref|XP_816775.1| ribosomal RNA methyltransferase [Trypanosoma cruzi strain CL
Brener]
gi|70881926|gb|EAN94924.1| ribosomal RNA methyltransferase, putative [Trypanosoma cruzi]
Length = 253
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 10/216 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN--RRIVDLGSS 77
+ + R W+ + DP+V A+ G+ ARSA+KLL++++K + N R +VD+G S
Sbjct: 7 KYLRQGGRQWMEKQARDPFVLEARRRGYVARSAFKLLEMDDKFGLFARNHTRVVVDIGCS 66
Query: 78 PGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
PG W QVA G V + + + G + DF D+ + + +
Sbjct: 67 PGGWLQVARERCGDRCALFGVDLLHVS--PTVTGAVCIQGDFTDMAIQQQLLSRMENVHA 124
Query: 137 ----DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT-TND 191
D+V+SDM D + M L A FA L GG+F+ K T +
Sbjct: 125 NGLVDVVMSDMCLNRGSGGTDDRQKQMQLNMEALAFATSQLRTGGNFVCKVLGTPTAFEE 184
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ L++ F + KP +SR S E F++ R+
Sbjct: 185 LRGELQRWFVRSSLCKPFSSRRGSDEAFMVCLAKRE 220
>gi|297807411|ref|XP_002871589.1| hypothetical protein ARALYDRAFT_325857 [Arabidopsis lyrata subsp.
lyrata]
gi|297317426|gb|EFH47848.1| hypothetical protein ARALYDRAFT_325857 [Arabidopsis lyrata subsp.
lyrata]
Length = 229
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 52/222 (23%), Positives = 89/222 (40%), Gaps = 31/222 (13%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + AQ G+ ARSA+KLLQI +++++++ ++DLG +PG+W QVA + G +
Sbjct: 8 DFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLKSG 67
Query: 96 TRVVAIDILDMEPILGV-----KFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
VV +DI ++ ++LSDM + G
Sbjct: 68 GIVVGMDIKKVKVPPQCDSRVQTIAADVLNFPRQTIRELSPQQLGFSVILSDMCHSVSGI 127
Query: 151 RKIDHLRTMSLCEAAT--------------------------FFALEMLNIGGDFLVKTF 184
D + L A +L GG ++K
Sbjct: 128 TTRDAALSAELGMRALDLAVGQAAISQSPDDDNDGGDEVPSNESRRGVLRHGGHLVIKLL 187
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ D + K F K ++P A+R+ S E++L+ +GFR
Sbjct: 188 ESEDAQDFARICKPIFNKASWLRPKATRSSSREIYLICQGFR 229
>gi|73667119|ref|YP_303135.1| ribosomal RNA methyl transferase RrmJ/FtsJ [Ehrlichia canis str.
Jake]
gi|83305659|sp|Q3YRW8|RLME_EHRCJ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|72394260|gb|AAZ68537.1| 23S rRNA Um-2552 2'-O-methyltransferase [Ehrlichia canis str. Jake]
Length = 171
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
++ K I + + ++DLGS PG WSQ AA+ S+ NN V ++DI +M+ I V F K
Sbjct: 1 MDNKFSIFKKGQYVLDLGSFPGGWSQFAAQKV-SHGNNNLVFSVDIQNMDAIPNVIFIKC 59
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
D + + D++LSDMA G++++DH ++LCE + ++ G
Sbjct: 60 DISNEIEI-LNDKFHNKKFDVILSDMAPKACGNKQVDHANIINLCEMSLDIVIKFARENG 118
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
F+ K QG + +K +F+ V + KP ASR +S E++L+ GF+K
Sbjct: 119 TFITKILQGEYEKEFYQSMKSNFKLVKYFKPKASRKDSSEIYLVGLGFKK 168
>gi|255581527|ref|XP_002531569.1| ftsj, putative [Ricinus communis]
gi|223528799|gb|EEF30805.1| ftsj, putative [Ricinus communis]
Length = 228
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 30/221 (13%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + AQ G+ ARSA+KLLQI ++H+++ ++DLG +PG+W QVA + G N
Sbjct: 8 DFFYREAQRLGYVARSAFKLLQIQKQHKLITPGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
Query: 96 TRVVAIDIL-----DMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIG 149
VV ID+ + VK D ++L + +VLSDM P G
Sbjct: 68 GSVVGIDLKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSDMCPPVSG 127
Query: 150 HRKIDHLRTMSLCEAATFFAL------------------------EMLNIGGDFLVKTFQ 185
D +M L A A+ +L GG ++K +
Sbjct: 128 ITTKDAALSMELGMQALDIAIGGAASAHPDDENQNDDSTSGENDNGVLQAGGHLVIKLLE 187
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ + K F+K ++P A+R+ S E++L+ +G +
Sbjct: 188 SEDIQEFTRICKPLFRKASWLRPKATRSSSREIYLICQGLK 228
>gi|170591144|ref|XP_001900330.1| protein R74.7 [Brugia malayi]
gi|158591942|gb|EDP30544.1| protein R74.7, putative [Brugia malayi]
Length = 207
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 91/184 (49%), Gaps = 7/184 (3%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y + A+ EGWRARSA+KL+QI+++ I + R+VDL ++PGSWSQV ++
Sbjct: 5 SKDKRDIYYRLAKEEGWRARSAFKLMQIDDEFNIFEGVHRVVDLCAAPGSWSQVLSKKVY 64
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMA 144
R+VA+D+ M P+ G+ + D + + + I + G+ DLV+ D A
Sbjct: 65 FAQDEKERKAVRIVAVDLQPMSPLPGIIQLQGDITEACTAKKIISYLEGSKADLVICDGA 124
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G +D L A A +L G F+ K F+ + LK ++V
Sbjct: 125 PDVTGLHALDEYMQSQLVLAPLNIATFVLKEAGTFVAK-FRTRDITLLYAQLKIFSKEVY 183
Query: 205 HVKP 208
KP
Sbjct: 184 CTKP 187
>gi|221126837|ref|XP_002156038.1| PREDICTED: similar to predicted protein, partial [Hydra
magnipapillata]
Length = 188
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + G SR D + A+ G+RARSA+KL+Q+N K LQ +R ++DL +
Sbjct: 1 MGKKGKVGKSR-------KDKFYHLAKETGYRARSAFKLIQLNRKFAFLQESRVLIDLCA 53
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-IRQAIGGN 135
+PG W QVA+ ++ ++ ID++ ++PI V + D + ++ +
Sbjct: 54 APGGWLQVASNFMP---MSSVIIGIDLVPIKPIKNVTTIQADITTDKCRQLVRKELKTWS 110
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL 195
D+VL+D A D L +A A E L GG F+ K F+ +L +
Sbjct: 111 ADVVLNDGAPNVGAAWVQDAFSQAQLALSALKLASEHLKRGGWFITKVFRSKDYTALLWV 170
Query: 196 LKKHFQKVIHVKPVAS 211
++ F+KV KP S
Sbjct: 171 FQQLFKKVHATKPQVS 186
>gi|327301813|ref|XP_003235599.1| cell division protein ftsj [Trichophyton rubrum CBS 118892]
gi|326462951|gb|EGD88404.1| cell division protein ftsj [Trichophyton rubrum CBS 118892]
Length = 291
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 67/284 (23%), Positives = 109/284 (38%), Gaps = 58/284 (20%)
Query: 1 MVKPP-GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M +P + + VK S SS+ W R D Y + A ++G ++R+A+KLLQIN
Sbjct: 1 MFRPALQNRGSPSCSSFVKVLSRTISSKQWQARQGKDAYTKEASIQGLKSRAAFKLLQIN 60
Query: 60 EKHQILQSNR------------------------RIVDLGSSPGSWSQVAARITG----- 90
+++++ +S + R+V + P + + I G
Sbjct: 61 DRYRLFKSGQTVVDLGYAPGSWSQVAFNLTKPRGRVVGVDIIPAQPPRGVSTIQGNFLSP 120
Query: 91 -----------------SNANNTRVVAIDILDMEPILGVKFFKFDFLDLD---------- 123
+ + + G +
Sbjct: 121 RVQEYVKDFVRDPNRGRPRSQLPALGEQEKPSPPTEPGAETDGGYIDLERSSSAHINKVD 180
Query: 124 -SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
+ +A G+ D++LSDM T G + DHL +M LC AA FA +L GG F+ K
Sbjct: 181 EAAPLPTKAKVGSVDVILSDMLMNTSGTKSRDHLGSMELCNAALDFASNVLKEGGHFVCK 240
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+QG D LK+ F +V KP +SR+ES E + + R
Sbjct: 241 YYQGSGEKDFENDLKRLFHRVYREKPESSRSESKEAYFIGIRRR 284
>gi|162450262|ref|YP_001612629.1| hypothetical protein sce1990 [Sorangium cellulosum 'So ce 56']
gi|189040342|sp|A9FQE4|RLME_SORC5 RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|161160844|emb|CAN92149.1| rrmJ [Sorangium cellulosum 'So ce 56']
Length = 212
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 4/191 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+ ARS +KL +I+ + ++L+ +R++DLG++PGSWS AA+ G+
Sbjct: 20 DAFTKAAKAQGYPARSVFKLEEIDRRVRLLRPGQRVLDLGAAPGSWSMYAAQRIGAGGKL 79
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
V + + + D L L + A D+VLSDMA T G + D
Sbjct: 80 LAVD-LSPITAAFGPQATVVQGDALSLTNEAL---AQFAPYDVVLSDMAPATSGSKIADQ 135
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
R+ L A A +L GG F+ K F L+ ++V ++P +RA S
Sbjct: 136 ARSYELFMRAVAVAEALLAPGGAFVGKIFMSEDFVKARDALRNLCEEVRSIRPEGTRASS 195
Query: 216 VEMFLLAKGFR 226
VE+FL+ +
Sbjct: 196 VEIFLVGLKRK 206
>gi|218506332|ref|ZP_03504210.1| cell division protein [Rhizobium etli Brasil 5]
Length = 106
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 64/106 (60%), Positives = 83/106 (78%), Gaps = 2/106 (1%)
Query: 1 MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
M K P G+ + R L Q+VKN+ + SSR WL RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1 MTKAPIAGNRTGRKLGQRVKNKKMKASSRQWLQRHINDPYVQRAQLEGYRARAAFKLLEI 60
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDIL 104
+EK+ IL+ +RI+DLG++PGSWSQ+AA +TGS + RV AID L
Sbjct: 61 DEKYHILRGAKRIIDLGAAPGSWSQIAANVTGSTDEDIRVAAIDFL 106
>gi|39979231|emb|CAE85601.1| probable tRNA 2'-O-ribose methyltransferase [Neurospora crassa]
Length = 318
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 19/193 (9%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRARSA+KLLQ++E+ + ++ R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEEFNLFENVTRVVDLCAAPGSWSQ 57
Query: 84 VAARI-TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-------------IR 129
V +R T + ++V+ID+ + P+ G+ + D + +
Sbjct: 58 VLSRESTPAPREQVKIVSIDLQPISPLPGIITLRADITHPATVPLLLKALDPDFDPSTMN 117
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
DLV+SD A G +D L AA AL +L GG F+ K F+G
Sbjct: 118 PQASHPVDLVISDGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNV 177
Query: 190 NDILCLLKKHFQK 202
+ + LK F+K
Sbjct: 178 DLLYAQLKVFFEK 190
>gi|39974589|ref|XP_368685.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
gi|145018542|gb|EDK02821.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
Length = 385
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 103/245 (42%), Gaps = 47/245 (19%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE----------------------K 61
SS+D D Y + A+ +GWRARSA+KLLQ++E +
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRARSAFKLLQLDEGSWSQVLSRVLIKGEKFGRTAWQ 57
Query: 62 HQILQSNRRIVDLGSSPGSWSQVAARITGS-------NANNTRVVAIDILDMEPILGVKF 114
+ R+++ + G V + S + ++V+ID+ + P+ G+
Sbjct: 58 DDEAKFRRQMLHIFDGQGQEPVVDGQGDPSVTDAELKPRKDVKIVSIDLQPISPLPGIVT 117
Query: 115 FKFDFLDLDS-------------WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
+ D + + + Q DLVLSD A G +D L
Sbjct: 118 LRADITHPATVPLLLKALDPGYDPKTMSQQASHPVDLVLSDGAPDVTGLHDLDIYVQSQL 177
Query: 162 CEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
AA AL +L GG F+ K F+G + + LK F+KVI KP +SRA SVE F++
Sbjct: 178 LFAALNLALCVLKPGGKFVAKIFRGRNVDVLYAQLKVFFEKVIVAKPRSSRASSVEAFIV 237
Query: 222 AKGFR 226
F+
Sbjct: 238 CLNFQ 242
>gi|301165470|emb|CBW25041.1| 23S rRNA methyltransferase [Bacteriovorax marinus SJ]
Length = 197
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
+ D Y ++A+ + + ARS YKL +I+ K +I+ ++VD G PGSW Q +R G+
Sbjct: 5 VQDHYFKKAKKDDFLARSVYKLEEIDSKFKIINKGDQVVDFGYHPGSWVQYTSRRVGAEG 64
Query: 94 NNTRVVAI-DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ + + V F+ D D+D+ + D+VLSDMA T G R
Sbjct: 65 KVIGIDIRPLNKKLLTLKNVTLFEKDIFDVDTTSQLGA--DNKFDVVLSDMAPNTTGIRS 122
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+D R+++L E L G+ ++K F L K F++ +KP ++R
Sbjct: 123 VDQDRSLNLVEKVFEVLPVFLKENGNMVIKVFDSHQAQKFLKESKGLFKQYDFLKPKSTR 182
Query: 213 AESVEMFLLAKGFR 226
+ S E F++ +G++
Sbjct: 183 SVSKEFFVIGRGYK 196
>gi|257076513|ref|ZP_05570874.1| FtsJ-like methyltransferase [Ferroplasma acidarmanus fer1]
Length = 194
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y RA+ + +R+R++YKLL+I K ++ +++ GSSPG W+QV ++T
Sbjct: 3 RKDRYYTRAKKDNFRSRASYKLLEIQSKFNVIWKTDYVIEFGSSPGGWTQVVQKLTEKP- 61
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG----NPDLVLSDMAYPTIG 149
V+AIDI M+PI V F + + D + E I+ A+ + VLSD T G
Sbjct: 62 ----VIAIDISPMDPIENVTFVQGNINDPELSEKIKIAMDSLGISSVSTVLSDAMIKTSG 117
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+ DH+ + LC+ ++++L+ GG+ ++K FQG +T + K +F KP
Sbjct: 118 NYDRDHMGSYLLCDNVMNLSIDLLSSGGNVVLKQFQGDSTMAFVNKWKVYFNYYKVTKPN 177
Query: 210 ASRAESVEMFLLAKGF 225
ASR S E++++ K
Sbjct: 178 ASRQHSREVYIIFKDK 193
>gi|315056971|ref|XP_003177860.1| ribosomal RNA methyltransferase MRM2 [Arthroderma gypseum CBS
118893]
gi|311339706|gb|EFQ98908.1| ribosomal RNA methyltransferase MRM2 [Arthroderma gypseum CBS
118893]
Length = 292
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 67/285 (23%), Positives = 112/285 (39%), Gaps = 59/285 (20%)
Query: 1 MVKPP-GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M+KP + VK SS+ W +R D Y + A ++G ++R+A+KLLQIN
Sbjct: 1 MLKPALQNRGLPSCGSFVKVFFRSISSKQWQSRQGKDTYTKEAGMQGLKSRAAFKLLQIN 60
Query: 60 EKHQILQSNR------------------------RIVDLGSSPGSWSQVAARITG----- 90
+++++ +S + R+V + P + + I G
Sbjct: 61 DRYRLFKSGQTVVDLGYAPGSWSQVAFNLTKPRGRVVGVDIIPAQPPRGVSTIQGNFLSP 120
Query: 91 -----------------------------SNANNTRVVAIDILDMEPILGVKFFKFDFLD 121
++ T+ + +
Sbjct: 121 RVQEYVKDFVRDPNRGRPRSQLPTSSEQEESSPFTKPDTETDGGYIDLERSSSAHINKEG 180
Query: 122 LDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV 181
+ + +A G+ D+VLSDM T G + DHL +M LC+AA FA +L GG F+
Sbjct: 181 DEVAQPPNKAKVGSVDVVLSDMLMNTSGTKSRDHLGSMELCKAALDFASNVLKQGGHFVC 240
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K +QG + LK+ F +V KP +SR+ES E + + R
Sbjct: 241 KYYQGPGEKEFENELKRLFYRVYREKPDSSRSESKEAYFIGIRRR 285
>gi|6759446|emb|CAB69851.1| cell division-like protein [Arabidopsis thaliana]
Length = 287
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 13/189 (6%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
+R D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQV +R
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ + +VAID+ M PI GV + D + + E + + G DLV+
Sbjct: 65 LPAKSSAESKDGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L A +L GG F+ K F+G T+ + C F
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAGLTIVTHILKEGGKFIAKIFRGKDTSLLYCQA---F 181
Query: 201 QKVIHVKPV 209
+ P
Sbjct: 182 AVCENYSPP 190
>gi|315187256|gb|EFU21012.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Spirochaeta thermophila
DSM 6578]
Length = 194
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 57/192 (29%), Positives = 101/192 (52%), Gaps = 3/192 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
+D Y ++A+ EG+ ARS YKL++I K++++ R++DLG++PGSWS+ G
Sbjct: 5 DDYYTRKARREGYPARSVYKLMEIQRKYRVVSRGDRVLDLGAAPGSWSKYLLSCVGEKGL 64
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V + L + + F++ DF + E I +++SD A T G+R +D
Sbjct: 65 VVAVD-LLPLVIGSHERLVFYQGDFTSDEVQERIDVHAP--FQVIVSDAAPSTSGNRGLD 121
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
R+ +L E A L GG+ + K FQG +I +++ +++ +P A+R +
Sbjct: 122 TARSEALVERILSLAGRWLVPGGNLVAKLFQGSGAQEIFRAVREGWERAYFFRPQATRRQ 181
Query: 215 SVEMFLLAKGFR 226
S E+F++ G R
Sbjct: 182 SFEVFVVGVGKR 193
>gi|302662114|ref|XP_003022716.1| hypothetical protein TRV_03177 [Trichophyton verrucosum HKI 0517]
gi|291186676|gb|EFE42098.1| hypothetical protein TRV_03177 [Trichophyton verrucosum HKI 0517]
Length = 783
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 32/192 (16%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ +G+RAR+A+KL+Q+N+K+ L+
Sbjct: 13 DKWYRLAKEKGYRARAAFKLIQLNKKYGFLEK---------------------------- 44
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ +D+ ++PI V F+ D + D VL D A D
Sbjct: 45 ---IGVDLSPIKPIPKVITFQSDITTDKCRATIRQHFKTWKADTVLHDGAPNVGTAWVQD 101
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
L + A E L GG F+ K F+ N +L + K+ F V KP +SR
Sbjct: 102 AFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPLLWVFKQLFTTVEATKPPSSRNV 161
Query: 215 SVEMFLLAKGFR 226
S E+F++ GF+
Sbjct: 162 SAEIFVVCLGFK 173
>gi|330038977|ref|XP_003239752.1| SAM-dependent methyltransferase [Cryptomonas paramecium]
gi|327206677|gb|AEA38854.1| SAM-dependent methyltransferase [Cryptomonas paramecium]
Length = 297
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 93/190 (48%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + ++ +R+R+A+KL++I+ K + ++DL S+PGSW QV+ ++T +
Sbjct: 10 DFFYFISKKFKFRSRAAFKLIEIDNKFHFFKKAVGVLDLCSAPGSWMQVSRKLTQLHIPI 69
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
+ I + + V + +S I + G +++L D + D
Sbjct: 70 VGIDLCKIKKIHGCVFVNGDITSYYCFNSVLKIIKNFGLTFNIILHDGSPRAEIKWLSDV 129
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
+ L A F +ML G F+ K F+ N +L LK +F K+ +KP+ASR ES
Sbjct: 130 YKQNKLVLYAFKFTHKMLCPNGWFVTKIFKSKYFNGLLFFLKSYFGKIFILKPIASRKES 189
Query: 216 VEMFLLAKGF 225
VE++++ K F
Sbjct: 190 VEIYIICKKF 199
>gi|75400150|sp|Q8KTR0|RLME_TREPR RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|21702591|gb|AAM75988.1|AF481102_24 cell division protein [Candidatus Tremblaya princeps]
Length = 202
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+W RH+ D +V+ ++ G+RAR+A KL +++ K+ ++ +++LGSSPG WSQ +
Sbjct: 6 EWYARHVGDSFVRTSKAWGYRARAACKLKRLDAKYGLMSRQCDVLELGSSPGVWSQYISY 65
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPT 147
+ R V++D M + GV F D + ++ + + L+LSD+
Sbjct: 66 ERRVSGMAWRTVSVDTRAMVRVRGVSFIHGDITEAETMAEVSSRLPSGVGLILSDICPHP 125
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
R +D + T + E + L GG L KTF + I ++++HF V +
Sbjct: 126 SCERYLDSIATAKVAETLLMVSRRFLLDGGALLHKTFVIRAEH-IASVMERHFSSVEVYR 184
Query: 208 PVASRAESVEMFLLAKG 224
+SR+ + E +LL G
Sbjct: 185 DASSRSFNSEAYLLCVG 201
>gi|326474733|gb|EGD98742.1| cell division protein ftsj [Trichophyton tonsurans CBS 112818]
Length = 291
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 106/267 (39%), Gaps = 57/267 (21%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR------- 69
+K S SS+ W R D Y + A ++G ++R+A+KLLQIN+++++ +S +
Sbjct: 18 LKQFSRTISSKQWQARQGKDAYTKEASMQGLKSRAAFKLLQINDRYRLFKSGQTVVDLGY 77
Query: 70 -----------------RIVDLGSSPGSWSQVAARITG---------------------- 90
R+V + P + + I G
Sbjct: 78 APGSWSQVAFNLTKPRGRVVGVDIIPAQPPRGVSTIQGNFLSPRVQEYVKDFVRDPNRGR 137
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDF-----------LDLDSWEFIRQAIGGNPDLV 139
+ + G + D D+ +A G+ D++
Sbjct: 138 PWSQLPTLNEQGKSSPSTEPGAETDGGYIDLERSSSAHINKDDDAAPLPTKAKVGSVDVI 197
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDM T G + DHL +M LC+AA FA +L GG F+ K +QG D LK+
Sbjct: 198 LSDMLMNTSGTKSRDHLGSMELCKAALDFASNVLKEGGHFVCKYYQGPGEKDFENELKRL 257
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F +V KP +SR+ES E + + R
Sbjct: 258 FHRVYREKPESSRSESKEAYFIGIRRR 284
>gi|326484862|gb|EGE08872.1| ribosomal RNA methyltransferase MRM2 [Trichophyton equinum CBS
127.97]
Length = 291
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 106/267 (39%), Gaps = 57/267 (21%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR------- 69
+K S SS+ W R D Y + A ++G ++R+A+KLLQIN+++++ +S +
Sbjct: 18 LKQFSRTISSKQWQARQGKDAYTKEASMQGLKSRAAFKLLQINDRYRLFKSGQTVVDLGY 77
Query: 70 -----------------RIVDLGSSPGSWSQVAARITG---------------------- 90
R+V + P + + I G
Sbjct: 78 APGSWSQVAFNLTKPRGRVVGVDIIPAQPPRGVSTIQGNFLSPRVQEYVKDFVRDPNRGR 137
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDF-----------LDLDSWEFIRQAIGGNPDLV 139
+ + G + D D+ +A G+ D++
Sbjct: 138 PRSQLPTLNEQGKSSPSTEPGAETDGGYIDLERSSSAHINKDDDAAPLPTKAKVGSVDVI 197
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
LSDM T G + DHL +M LC+AA FA +L GG F+ K +QG D LK+
Sbjct: 198 LSDMLMNTSGTKSRDHLGSMELCKAALDFASNVLKEGGHFVCKYYQGPGEKDFENELKRL 257
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F +V KP +SR+ES E + + R
Sbjct: 258 FHRVYREKPESSRSESKEAYFIGIRRR 284
>gi|167044324|gb|ABZ09003.1| putative FtsJ-like methyltransferase [uncultured marine
crenarchaeote HF4000_APKG6B14]
Length = 197
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y + A +EG+R+RS+YKL ++++ ++I+ ++DLG +PG W+QVA ++ G+
Sbjct: 7 RKDHYRKLASVEGYRSRSSYKLKELHKSYRIIGVGHYVLDLGCAPGGWTQVAVQLAGNK- 65
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+V+ +D +E I G K D D + I G ++V+ D++ G+ +
Sbjct: 66 --GKVMGVDTSYVEEIPGAYMLKSDICDGSVTKEILSFFGKKVNVVICDLSPQVTGNWSV 123
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH +S AA ++L G+ L K F G +N+ +KK F KV KP SR
Sbjct: 124 DHSTQISSNYAAAKIMDQVLKKNGNALFKVFDGEYSNEFYQYVKKKFFKVKLKKPKVSRK 183
Query: 214 ESVEMFLLAKGF 225
+S E++ + G+
Sbjct: 184 QSSELYCICLGY 195
>gi|302783825|ref|XP_002973685.1| hypothetical protein SELMODRAFT_99612 [Selaginella moellendorffii]
gi|302787935|ref|XP_002975737.1| hypothetical protein SELMODRAFT_104009 [Selaginella moellendorffii]
gi|300156738|gb|EFJ23366.1| hypothetical protein SELMODRAFT_104009 [Selaginella moellendorffii]
gi|300158723|gb|EFJ25345.1| hypothetical protein SELMODRAFT_99612 [Selaginella moellendorffii]
Length = 223
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
+ H+ D + + A + ARSA+KL++I EKH+IL+ I+DLG +PG+W QVA +
Sbjct: 1 MASHVPDFFYKEALRLRYVARSAFKLVEIQEKHRILKPGAAILDLGCAPGAWLQVACQNL 60
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDF-------LDLDSWEFIRQAIGGNPDLVLSD 142
G+ VV +D + + + ++ + + +++LSD
Sbjct: 61 GTRDQGGVVVGVDTKKINVPGDHTDHRVKAIAADVMKIKPETLAAMTPEVKITYNVILSD 120
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEM---------------LNIGGDFLVKTFQGG 187
M G D + L A AL L G ++K +G
Sbjct: 121 MCPSVSGIGFKDATLSAELGSRALELALGFHPDDERDSTKKVNGLLVPSGSLVIKLLEGE 180
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+ K+F+ V ++P ASR+ S E++L+AKG
Sbjct: 181 ESQGFPDYCNKYFRSVSWLRPKASRSTSREIYLIAKG 217
>gi|241959530|ref|XP_002422484.1| 2'O-ribose methyltransferase, putative; ribosomal RNA
methyltransferase, mitochondrial precursor, putative
[Candida dubliniensis CD36]
gi|223645829|emb|CAX40492.1| 2'O-ribose methyltransferase, putative [Candida dubliniensis CD36]
Length = 319
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 112/227 (49%), Gaps = 21/227 (9%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-QSNRRIVDLG 75
V+N+S Q R +++ ND Y + + +++R+A+KL +I++K++I + + IVDLG
Sbjct: 68 VRNKSKQNV-RKYIDSVSNDTYANKRRQSLFKSRAAFKLEEIDKKYKIFTKKTKNIVDLG 126
Query: 76 SSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN 135
+PG+W+Q A +++ +DI P+ G + + D ++ + IR +
Sbjct: 127 FAPGAWTQFAVHRLEEQDQPHKILGVDINLATPVKGCHYMQGDIMNKSTHAKIRTFFEKS 186
Query: 136 P-------------------DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
DL++SDM G ++DH+ M LC AA + A L
Sbjct: 187 RFQESQNSQIDTNSNEEKQLDLIMSDMMVDCTGSGQVDHIGNMELCTAALYLAYSELRSE 246
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
D ++K + G + F+KVIH+KP AS+ S E++++ +
Sbjct: 247 KDMILKVWSGSELKLFEARMNMMFKKVIHIKPDASKDRSSELYMVGR 293
>gi|160331225|ref|XP_001712320.1| sbp1 [Hemiselmis andersenii]
gi|159765767|gb|ABW97995.1| sbp1 [Hemiselmis andersenii]
Length = 317
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 6/199 (3%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
L + D Y ++ +R+R+A+KL+++N+K + L +R ++DL ++PG W QV ++
Sbjct: 3 LKKERKDLYYFLSKKYFFRSRAAFKLIELNQKFRFLDKSRGVLDLCAAPGGWLQVVQKVV 62
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE---FIRQAIGGNPDLVLSDMAYP 146
+ ++ +D + PI G FK D E ++ D+VL D A
Sbjct: 63 SPG---SLIIGVDAKKILPIKGCNMFKGDITSRGCLEPILKLKNWKNKRLDVVLHDGAPR 119
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
T D L SL A A+ + GG F+ K F G + +L +L+ F+K+
Sbjct: 120 TGTSWVRDALNQNSLSLNAFKLAVNCIEKGGWFVSKIFCSGNFHGLLFVLRFFFKKIKIF 179
Query: 207 KPVASRAESVEMFLLAKGF 225
KP ASR S E +L+ K F
Sbjct: 180 KPRASRLTSAETYLICKDF 198
>gi|167042175|gb|ABZ06908.1| putative FtsJ-like methyltransferase [uncultured marine
crenarchaeote HF4000_ANIW93H17]
Length = 197
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/192 (30%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y + A +EG+R+RS+YKL ++++ ++I+ ++DLG +PG W+QVA ++ G+
Sbjct: 7 RKDHYRKLASVEGYRSRSSYKLKELHKSYRIIGVGHYVLDLGCAPGGWTQVAVQLAGNK- 65
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+V+ +D +E I G K D D + + G ++V+ D++ G+ +
Sbjct: 66 --GKVMGVDTSFVEEIPGAYMLKSDICDGSVTKEVLSFFGKKVNVVICDLSPQVTGNWSV 123
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
DH +S AA ++L G+ L K F G +N+ +KK F KV KP SR
Sbjct: 124 DHSTQISSNYAAAKIMDQVLKKNGNALFKVFDGEYSNEFYQYVKKKFFKVKLKKPKVSRK 183
Query: 214 ESVEMFLLAKGF 225
+S E++ + G+
Sbjct: 184 QSSELYCICLGY 195
>gi|119953113|ref|YP_945321.1| 23S rRNA Um2552 2'-O-methyltransferase [Borrelia turicatae 91E135]
gi|119861884|gb|AAX17652.1| 23S rRNA Um2552 2'-O-methyltransferase [Borrelia turicatae 91E135]
Length = 211
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 93/190 (48%), Gaps = 5/190 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y +RA+ EG+ ARS YKL++I+++ + S I+D+G+SPGS+SQ A
Sbjct: 26 DEYSRRAKKEGYLARSVYKLIEIDKRFSLFSSG-NILDVGASPGSFSQYAYGNLKDGVLV 84
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
+ L+ F K + + + I L++SD A T G+R +D
Sbjct: 85 AVDLNDIDLNFTN--NFYFIKGNIYIDEVCQKIETFAP--YSLIISDAAPKTTGNRLVDT 140
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
+ +L A +L GG+ L+K FQGG + LK F+ V ++P A R S
Sbjct: 141 SNSFNLNMRIIELASRILVKGGNLLLKVFQGGEEEQLFYKLKSCFKIVKKIRPKAVRKNS 200
Query: 216 VEMFLLAKGF 225
E++ L+K F
Sbjct: 201 FEIYFLSKDF 210
>gi|312218785|emb|CBX98730.1| similar to AdoMet-dependent rRNA methyltransferase spb1
[Leptosphaeria maculans]
Length = 840
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 54 KLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVK 113
KL+Q+N+K+ L+ ++ ++DL ++PGSW QVA+ + + + +V +D+ ++ I
Sbjct: 28 KLIQLNKKYNFLEKSKVLIDLCAAPGSWCQVASEVMPAG---SLIVGVDLAPIKAIPRCI 84
Query: 114 FFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEM 172
F+ D + D VL D A D L + A E
Sbjct: 85 TFQSDITTDKCRATLRQHLKHLKADAVLHDGAPNVGTAWVQDAFSQAELVLQSMKLATEF 144
Query: 173 LNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L GG F+ K F+ N +L + + F KV KP +SR S E+F++ +G++
Sbjct: 145 LAEGGTFVTKIFRSKDYNSLLWVFNQLFTKVEATKPPSSRNVSAEIFVVCRGYK 198
>gi|307555273|gb|ADN48048.1| ribosomal RNA large subunit methyltransferase J [Escherichia coli
ABU 83972]
Length = 157
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
+VDLG++PG WSQ G R++A D+L M+PI+GV F + DF D + +
Sbjct: 1 MTVVDLGAAPGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKAL 57
Query: 129 RQAI-GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
+ + +V+SDMA G +D R M L E A ++L GG F+VK FQG
Sbjct: 58 LERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 117
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ L ++ F KV KP +SRA S E++++A G +
Sbjct: 118 GFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRK 156
>gi|58260402|ref|XP_567611.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229692|gb|AAW46094.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1277
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 91/253 (35%), Gaps = 61/253 (24%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y ++ + G+RARSAYKLL ++E+ + + VDL ++PGSWSQV + +
Sbjct: 10 HRDVYYRKGKSAGYRARSAYKLLHLDEEFDLFTNVHTAVDLCAAPGSWSQVLGQKLKPKS 69
Query: 94 NNT----RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTI 148
RVV+ D+ M P+ + + D + + A+GG DLV+ D A
Sbjct: 70 KQGGEGTRVVSCDLQPMAPLPNITTLQTDITLPSTIPLVLDALGGRKADLVVCDGAPDVT 129
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT---NDILCLLKKHFQK--- 202
G +D L AA +L ++ G + K F + L+ F
Sbjct: 130 GVHDLDAYLHSQLLLAALTLSLTLMAPGATLIFKIFLSPLDPRAEFLASQLRCFFSSPLP 189
Query: 203 --------------------------------------------------VIHVKPVASR 212
V KP +SR
Sbjct: 190 EDKEKEDEFGQYAEFEEEGEYAEEAGQDKGDEKKRNVGTKGYDPQGRRGGVWVRKPRSSR 249
Query: 213 AESVEMFLLAKGF 225
S E F++ + F
Sbjct: 250 QGSAEAFIVCRNF 262
>gi|134117409|ref|XP_772598.1| hypothetical protein CNBK3020 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255215|gb|EAL17951.1| hypothetical protein CNBK3020 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1267
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 91/253 (35%), Gaps = 61/253 (24%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y ++ + G+RARSAYKLL ++E+ + + VDL ++PGSWSQV + +
Sbjct: 10 HRDVYYRKGKSAGYRARSAYKLLHLDEEFDLFTNVHTAVDLCAAPGSWSQVLGQKLKPKS 69
Query: 94 NNT----RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTI 148
RVV+ D+ M P+ + + D + + A+GG DLV+ D A
Sbjct: 70 KQGGEGTRVVSCDLQPMAPLPNITTLQTDITLPSTIPLVLDALGGRKADLVVCDGAPDVT 129
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT---NDILCLLKKHFQK--- 202
G +D L AA +L ++ G + K F + L+ F
Sbjct: 130 GVHDLDAYLHSQLLLAALTLSLTLMAPGATLIFKIFLSPLDPRAEFLASQLRCFFSSPLP 189
Query: 203 --------------------------------------------------VIHVKPVASR 212
V KP +SR
Sbjct: 190 EDKEKEDEFGQYAEFEEEGEYAEEAGQDKGDEKKRNVGTKGYDPQGRRGGVWVRKPRSSR 249
Query: 213 AESVEMFLLAKGF 225
S E F++ + F
Sbjct: 250 QGSAEAFIVCRNF 262
>gi|321264303|ref|XP_003196869.1| hypothetical protein CGB_K4110C [Cryptococcus gattii WM276]
gi|317463346|gb|ADV25082.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1315
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 91/246 (36%), Gaps = 54/246 (21%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D Y ++ + G+RARSAYKLL ++E+ + + VDL ++PGSWSQV + +
Sbjct: 10 HRDVYYRKGKSAGYRARSAYKLLHLDEEFDLFSHVQTAVDLCAAPGSWSQVLGQKLKPKS 69
Query: 94 NNT----RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTI 148
+ RVV+ D+ M P+ + + D + + A+GG DLV+ D A
Sbjct: 70 KHGGEGTRVVSCDLQPMAPLPNITTLQTDITLPSTIPLVLDALGGRKADLVVCDGAPDVT 129
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT---NDILCLLKKHFQK--- 202
G +D L AA +L ++ G + K F + L F
Sbjct: 130 GVHDLDAYLHSQLLLAALTLSLTLMAPGATLVFKIFLSPLDPRAEFLASQLTCFFASPLP 189
Query: 203 -------------------------------------------VIHVKPVASRAESVEMF 219
V KP +SR S E F
Sbjct: 190 EDDEDAFGQYEEFDGSVDTERQDMKEMRNEGKEGYDPQGRRGGVWVRKPRSSRQGSAEAF 249
Query: 220 LLAKGF 225
++ + F
Sbjct: 250 IVCRNF 255
>gi|224532294|ref|ZP_03672926.1| ribosomal RNA large subunit methyltransferase J [Borrelia
valaisiana VS116]
gi|224511759|gb|EEF82165.1| ribosomal RNA large subunit methyltransferase J [Borrelia
valaisiana VS116]
Length = 192
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 5/194 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
++D Y Q+A+ EG+ ARS YKL++INEK + S ++D+G++PGS+SQ A +
Sbjct: 4 LDDEYSQKAKREGYLARSVYKLIEINEKFSLFSSG-NVLDIGAAPGSFSQYAYKKLKKGI 62
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+ + L + F K D D+ I G LV+SD+A T G+R +
Sbjct: 63 LVSVDINDIGLKY--VNNFYFVKGDIFLEDTVSKINMF--GPYSLVISDVAPRTTGNRLV 118
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
D + +L +LE+L G+ L+K FQGG I +K+F+ V ++P A R
Sbjct: 119 DTSNSFNLSMRIIDLSLEVLLKKGNLLIKVFQGGDEMQIFKRFEKYFKFVKKIRPKAVRK 178
Query: 214 ESVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 179 NSFEIYFLGKSFGK 192
>gi|187918187|ref|YP_001883750.1| 23S rRNA Um2552 2'-O-methyltransferase [Borrelia hermsii DAH]
gi|119861035|gb|AAX16830.1| 23S rRNA Um2552 2'-O-methyltransferase [Borrelia hermsii DAH]
Length = 205
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 5/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y Q+A+ EG+ ARS YKL++I+++ + S I+D+G+SPGS+SQ A +
Sbjct: 14 DKYSQKAKKEGYLARSVYKLIEIDQRFSLFSSG-NILDIGASPGSFSQYAYNKLKNGVLV 72
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
+ L+ F K + + +E I+ L++SD A+ T G+R +D
Sbjct: 73 AVDLNDINLNFTN--NFYFIKGNIYIDEVFEKIKTFAP--YSLIISDAAFKTTGNRLVDT 128
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
+ +L A ++L GG+ L+K FQGG + LK+ F+ V ++P A R S
Sbjct: 129 SNSFNLNMRIVELASQILIRGGNLLLKVFQGGEEEQLFYKLKRCFKLVKKIRPKAVRKNS 188
Query: 216 VEMFLLAKGFRK 227
E++ L+K F K
Sbjct: 189 FEIYFLSKDFIK 200
>gi|153801759|ref|ZP_01956345.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
MZO-3]
gi|124122724|gb|EAY41467.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
MZO-3]
Length = 152
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 4/155 (2%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV A+ +G+R+R+ +K+ +I K ++L++ +VDLG+
Sbjct: 1 MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA++ G RV+A D+L ME I GV F + DF + + +
Sbjct: 61 APGGWSQFAAKVVGEG---GRVIACDLLPMESIAGVSFLQGDFREEVVLNALLDRIQPDM 117
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
D+V+SDMA G+ +D R M L E A
Sbjct: 118 VDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCR 152
>gi|225449466|ref|XP_002283276.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296086215|emb|CBI31656.3| unnamed protein product [Vitis vinifera]
Length = 233
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + AQ G+ ARSA+KLLQ+ +++++++ ++DLG +PG+W QVA + G N
Sbjct: 8 DFFYREAQRLGYAARSAFKLLQMQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA------IGGNPDLVLSDMAYPTIG 149
VV ID+ ++ + + D + + ++LSDM G
Sbjct: 68 GVVVGIDLKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSDMCPLVSG 127
Query: 150 HRKIDHLRTMSLCEAATFFALE----------------------------MLNIGGDFLV 181
D + + L A A+ +L GG ++
Sbjct: 128 ITTKDAVLSAELGMQALHLAVRGPALAPSGDEIQKGEHHDDSTSGPDDDGILQPGGHLVI 187
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K + + K F+K ++P A+R+ S E++L+ +G R
Sbjct: 188 KLLESEDAQGFSRICKPLFRKASWLRPKATRSSSREIYLICQGLR 232
>gi|293393160|ref|ZP_06637475.1| ribosomal RNA large subunit methyltransferase J [Serratia odorifera
DSM 4582]
gi|291424306|gb|EFE97520.1| ribosomal RNA large subunit methyltransferase J [Serratia odorifera
DSM 4582]
Length = 157
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 60/159 (37%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
+VDLG++PG WSQ G R++A DIL M+PI+GV F + DF D + +
Sbjct: 1 MTVVDLGAAPGGWSQYVVTQIG---GTGRIIACDILPMDPIVGVDFLQGDFRDELVLKAL 57
Query: 129 RQAI-GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
+ +V+SDMA G +D R+M L E A ++L GG FLVK FQG
Sbjct: 58 LDRVGESKVQVVMSDMAPNMSGTPAVDIPRSMYLVELALEMCRDVLAPGGSFLVKVFQGD 117
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ L ++ F KV KP ASRA S E++++A G +
Sbjct: 118 GFDEYLREIRSLFTKVKIRKPDASRARSREVYIVATGRK 156
>gi|154314078|ref|XP_001556364.1| hypothetical protein BC1G_04982 [Botryotinia fuckeliana B05.10]
gi|150849128|gb|EDN24321.1| hypothetical protein BC1G_04982 [Botryotinia fuckeliana B05.10]
Length = 385
Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 100/257 (38%), Gaps = 69/257 (26%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS+D D Y + A+ +GWRAR K + R+VDL ++PGSWSQ
Sbjct: 3 KSSKD-----KRDAYYRLAKEQGWRAR----------KFDLFSDVTRVVDLCAAPGSWSQ 47
Query: 84 VAARITGSNANNT-----------------------------------------RVVAID 102
V +R+ ++VAID
Sbjct: 48 VLSRVLIKGEKFGRAAWEDKEARMRQNILEINTPSSTEEKQLSNETELKPKKDVKIVAID 107
Query: 103 ILDMEPILGVKFFKFDFLDLDS-------------WEFIRQAIGGNPDLVLSDMAYPTIG 149
+ M P+ G+ + D + + + Q DLV+SD A G
Sbjct: 108 LQPMSPLQGIITLRADITHPATVPLLLSALDSSYDPKSLSQQASNPVDLVISDGAPDVTG 167
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
+D L AA AL +L GG F+ K F+G + + LK F++V+ KP
Sbjct: 168 LHDLDIYVQSQLLFAALNLALCVLRPGGKFVAKIFRGRNVDLLFAQLKIFFERVVVAKPR 227
Query: 210 ASRAESVEMFLLAKGFR 226
+SRA SVE F++ F+
Sbjct: 228 SSRASSVEAFIVCLNFQ 244
>gi|203284234|ref|YP_002221974.1| ribosomal RNA methyltransferase [Borrelia duttonii Ly]
gi|203287772|ref|YP_002222787.1| ribosomal RNA methyltransferase [Borrelia recurrentis A1]
gi|259494559|sp|B5RLD9|RLME_BORDL RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|259494560|sp|B5RRD2|RLME_BORRA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|201083677|gb|ACH93268.1| ribosomal RNA methyltransferase [Borrelia duttonii Ly]
gi|201084992|gb|ACH94566.1| ribosomal RNA methyltransferase [Borrelia recurrentis A1]
Length = 193
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 5/192 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Y Q+A+ EG+ ARS YKL++I++K + S I+D+G+SPGS+SQ A +
Sbjct: 6 DEYSQKAKNEGYLARSVYKLIEIDKKFSLFSSG-NILDIGASPGSFSQYAYANLKNGVLV 64
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
+ L+ F K + + ++ I+ L++SD A T G+R +D
Sbjct: 65 AVDLNDVNLNFTS--NFYFIKGNIYLDEVYQKIKIF--SPYSLIVSDAAPSTTGNRLVDT 120
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
+ +L A E L GG+ L+K FQGG I LK F+ V V+P A R S
Sbjct: 121 SNSFNLNIRIFELACESLMRGGNLLIKVFQGGEEEQIFYKLKSCFRVVKKVRPKAVRKNS 180
Query: 216 VEMFLLAKGFRK 227
E++ LAK F K
Sbjct: 181 FEIYFLAKDFAK 192
>gi|224033613|gb|ACN35882.1| unknown [Zea mays]
Length = 190
Score = 121 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 10/176 (5%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KLLQI+++ I + +VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKHVVDLCAAPGSWSQVLSRNLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ +VAID+ M PI GV + D + + + + + G DLV+
Sbjct: 65 VPAKQSSDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTADVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
D A G +D L AA +L +GG F+ K F+G T+ + C +
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAALAIVTHVLKVGGKFVAKIFRGKDTSLLYCQV 180
>gi|169868142|ref|XP_001840645.1| ribosomal RNA large subunit methyltransferase J [Coprinopsis
cinerea okayama7#130]
gi|116498249|gb|EAU81144.1| ribosomal RNA large subunit methyltransferase J [Coprinopsis
cinerea okayama7#130]
Length = 266
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 111/256 (43%), Gaps = 49/256 (19%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLE--GWRARSAYKLLQINEK-HQILQSNRR--IVDL 74
R + SSR WL R D YV++ Q++ +RARSA+KLL+IN++ L + +VDL
Sbjct: 9 RLAKKSSRQWLARQTKDSYVKKRQIDPAAFRARSAFKLLEINDQWDNFLSKSDVNAVVDL 68
Query: 75 GSSPGSWSQVAARITG-----------------------------SNANNTRVVAIDILD 105
G++PG WSQV A+ G ++A+D+L
Sbjct: 69 GAAPGGWSQVVAQKLGWTSESTDSSPTHDSASTFDPLAIDDDISAPAQGRGTIIAVDLLR 128
Query: 106 MEPILGVKFFKFDFLDLDSWE------FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
M PI GV DFL D+ G D++LSDMA G+ D ++
Sbjct: 129 MRPIHGVHDIVADFLAPDTDRVIQELLKREGVNDGKVDVILSDMAANASGNVTRDIECSL 188
Query: 160 SLCEAATFFALEM--------LNIGGDFLVKTFQGGTTNDIL-CLLKKHFQKVIHVKPVA 210
+C+A FA GG L+K F L F V ++KP +
Sbjct: 189 EICQAVMEFAGRHLRTAEKIGRKRGGVVLMKHFAHPELQQFREEELVPKFNLVKYIKPDS 248
Query: 211 SRAESVEMFLLAKGFR 226
SRAES E F L G++
Sbjct: 249 SRAESREGFFLCMGWK 264
>gi|68473115|ref|XP_719363.1| potential mitochondrial rRNA methyltransferase [Candida albicans
SC5314]
gi|46441176|gb|EAL00475.1| potential mitochondrial rRNA methyltransferase [Candida albicans
SC5314]
gi|238880388|gb|EEQ44026.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 271
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-QSNRRIVDLGSSPG 79
+ + R +++ ND Y + + +++R+A+KL +I+ K++I + + IVDLG +PG
Sbjct: 23 KSKQNVRKYIDSVSNDTYSNKRRQSLFKSRAAFKLQEIDSKYRIFTKRTKNIVDLGFAPG 82
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--- 136
+W+Q A + ++ IDI P+ G + + D ++ + IR
Sbjct: 83 AWTQFAVHRLEEQNLSHNILGIDINLATPVKGCHYMQGDIMNKSTHAKIRNFFEKQRLRE 142
Query: 137 ----------------DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
DL++SDM G DH+ M LC AA + A L D +
Sbjct: 143 TQDYQTDTSSDEEKQLDLIMSDMMVDCTGTGSADHIGNMELCTAALYLAYSELKPEKDMI 202
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
+K + G + F+KVIH+KP AS+ S E++++ +
Sbjct: 203 LKVWSGSELKLFETRMNIMFKKVIHIKPDASKDRSSELYMVGR 245
>gi|224112735|ref|XP_002316277.1| predicted protein [Populus trichocarpa]
gi|222865317|gb|EEF02448.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 33/223 (14%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + AQ G+ ARSA+KLLQI +KH+++ ++DLG +PG+W QVA + G N
Sbjct: 8 DFFYREAQRLGYVARSAFKLLQIQKKHKLIAPGSSVLDLGCAPGAWLQVACQSLGPLKNG 67
Query: 96 TRVVAIDILDMEPIL-----GVKFFKFDFLD-LDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
VV ID+ ++ V+ D + + +VLSDM G
Sbjct: 68 GAVVGIDLKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSDMCPLVSG 127
Query: 150 HRKIDHLRTMSLCEA---------------------------ATFFALEMLNIGGDFLVK 182
D + L T +L GG ++K
Sbjct: 128 ITTRDAALSAELGMQALGLAVGRAATAHLDEIRTDRLLNDSVCTADDNGILQPGGHLVIK 187
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ + + K F+K ++P A+R+ S E++L+ +G
Sbjct: 188 LLESEDNKEFSRICKPLFRKASWLRPKATRSSSREIYLICQGL 230
>gi|213622212|ref|ZP_03374995.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 139
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYPTIGHRKID 154
+V+SDMA G +D
Sbjct: 118 VQVVMSDMAPNMSGTPAVD 136
>gi|320032551|gb|EFW14503.1| cell division protein ftsj [Coccidioides posadasii str. Silveira]
Length = 321
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 64/285 (22%), Positives = 96/285 (33%), Gaps = 78/285 (27%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL--------------- 65
SS+ W R D Y + A L G ++R+A+KLLQIN ++I
Sbjct: 28 RRFASSKQWQARQFKDIYWREANLRGLKSRAAFKLLQINNHYRIFEPGQTVVDLGYAPGS 87
Query: 66 ---------QSNRRIVDLGSSPGSWSQVAARITGS------------------------- 91
N R++ + P + + I G+
Sbjct: 88 WSQVAVDLTHPNGRVLGIDIIPAQPPKGVSTIQGNFLSPRIQAYIREFLRNPDRGRPLRE 147
Query: 92 ------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF--IRQAIGGNPDLVLSDM 143
++ + I + E +A G D+VLSDM
Sbjct: 148 ELCSRTPQKTWTANEVETFEPGYIDRERDVSERISREPCDEHSPQTEAGEGTVDVVLSDM 207
Query: 144 ---------------------AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
T G DH R+M LC AA F+ ++L GG F+ K
Sbjct: 208 SAPWKLTTGYWKRSLNDPYNRMMNTSGLGFRDHARSMDLCNAAVNFSYDVLKPGGHFICK 267
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+QG + LK FQKV KP +SR ES E + + ++
Sbjct: 268 FYQGNEDQQLELRLKSLFQKVHREKPDSSRKESREAYFIGLKRKR 312
>gi|168031208|ref|XP_001768113.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680551|gb|EDQ66986.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + A+ + ARSA+KLL+I +KH+I++ ++DLG +PG++ QVA + G
Sbjct: 7 DFFYREARRLKYVARSAFKLLEIQKKHRIIRPGASVLDLGCAPGAFLQVACQNLGPPEKG 66
Query: 96 TRVVAIDILD-----MEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLV-LSDMAYPTIG 149
VV +DI V+ D + + + G V +SDM G
Sbjct: 67 GVVVGVDIKKVKVPADHCDHRVRTIASDVMQMSHAALASFSASGKGYSVLISDMCPSVSG 126
Query: 150 HRKIDHLRTMSLCEAATFFALEMLN-------------IGGDFLVKTFQGGTTNDILCLL 196
D + L A AL GG ++K +G + L L
Sbjct: 127 VGSKDAALSAELGMCALHLALGQSEVDDSIPETGGILLPGGSIVIKLLEGEDSQGFLKLC 186
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAK 223
K FQ++ ++P A+R+ S E++ + K
Sbjct: 187 KGRFQQLHWLRPKATRSTSREIYFIGK 213
>gi|15639669|ref|NP_219119.1| cell division protein (ftsJ) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025907|ref|YP_001933679.1| cell division protein [Treponema pallidum subsp. pallidum SS14]
gi|9910943|sp|O83687|RLME_TREPA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|226705319|sp|B2S3S1|RLME_TREPS RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|3322979|gb|AAC65645.1| cell division protein (ftsJ) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018482|gb|ACD71100.1| cell division protein [Treponema pallidum subsp. pallidum SS14]
gi|291060048|gb|ADD72783.1| ribosomal RNA large subunit methyltransferase J [Treponema pallidum
subsp. pallidum str. Chicago]
Length = 200
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 3/191 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + ++A G+RARS YKL +++K+ +L R++DLG++PGSW+Q + + A
Sbjct: 8 DFWAKKAAAAGYRARSVYKLAALDKKYSLLSRASRVLDLGAAPGSWTQYV--LGTAAACT 65
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
I + + + R A DL+LSD A T G+R +D
Sbjct: 66 AVCAVDVQPIASDIQDARLQRVQGDLCAADTRARVACNAPFDLILSDAAPRTTGNRTVDT 125
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
+ L A + L+ G + K FQG IL L+ HF V KP ASR S
Sbjct: 126 SASACLA-AGVCAYVNFLSSDGGLVFKVFQGSEHLAILTHLRAHFGAVCSFKPPASRPRS 184
Query: 216 VEMFLLAKGFR 226
E++++A+ FR
Sbjct: 185 CELYVVARFFR 195
>gi|71005240|ref|XP_757286.1| hypothetical protein UM01139.1 [Ustilago maydis 521]
gi|46096465|gb|EAK81698.1| hypothetical protein UM01139.1 [Ustilago maydis 521]
Length = 325
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 75/253 (29%), Positives = 110/253 (43%), Gaps = 57/253 (22%)
Query: 30 LNRHINDPYVQR-------------------AQLEGWRARSAYKLLQINEKHQILQSNRR 70
+ R D YV++ A G+ ARSA+KLLQ++++++ L+ R
Sbjct: 69 MQRQKADVYVKQRSRPNSPGKQGNAKDGNSLATSSGYVARSAFKLLQLDDRYRFLRPGRV 128
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
+VDLG++PG WSQ T S A +V A+D+L + I GV + DFLD +RQ
Sbjct: 129 MVDLGAAPGGWSQAIIERTRS-ATTGKVFALDLLPVADIEGVTSIQGDFLDPTIQAKLRQ 187
Query: 131 A-----------------IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML 173
+ G D+V+SDM T GH +D ++ LC AAT FA++ L
Sbjct: 188 LVSDAALGGRSGRDAEPQVDGFVDVVVSDMMANTTGHPIVDTEASLELCRAATNFAIQNL 247
Query: 174 N-------------------IGGDFLVKTFQGGTTNDILCL-LKKHFQKVIHVKPVASRA 213
++K F + L+KHF V K ASR
Sbjct: 248 KHDIQLMQDGERRSPTSLASKASVLVMKYFMSHQADLFRRDVLEKHFHFVKAEKMDASRK 307
Query: 214 ESVEMFLLAKGFR 226
ES E F + G +
Sbjct: 308 ESREQFWICIGLK 320
>gi|261187463|ref|XP_002620155.1| ribosomal RNA large subunit methyltransferase J [Ajellomyces
dermatitidis SLH14081]
gi|239594205|gb|EEQ76786.1| ribosomal RNA large subunit methyltransferase J [Ajellomyces
dermatitidis SLH14081]
gi|327356488|gb|EGE85345.1| ribosomal RNA large subunit methyltransferase J [Ajellomyces
dermatitidis ATCC 18188]
Length = 309
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 63/257 (24%), Positives = 98/257 (38%), Gaps = 59/257 (22%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR------------------- 69
W R D Y + A ++G ++R+A+KL+QINEKH+I + +
Sbjct: 41 WQARQAKDKYSREAAVKGLKSRAAFKLIQINEKHKIFKPGQSVVDLGYAPGSWSQVAVDL 100
Query: 70 -----RIVDLGSSPGSWSQVAARITGS---------------NANNTRVVAIDILDMEPI 109
R+V + P + + I G+ N N R +++ D
Sbjct: 101 TQPNGRVVGVDIIPAQPPKGVSTIQGNFLSPQIQAYVQEFLRNPNRGRAQSLNHFDDADP 160
Query: 110 LG-------VKFFKFDFLDLDSWEFIRQAIGGNPDL-------------VLSDMAYPTIG 149
V+ + S + G + VLSDM T G
Sbjct: 161 RSQPQADSEVEETEGYIDRERSASLHIAQVDGGNEDIPDIAVADKTVDVVLSDMMMNTSG 220
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
DH +M LC AA F+ +L GG F+ K +QG + LK+ FQ V KP
Sbjct: 221 MSFRDHAGSMDLCRAALEFSFNVLKTGGHFVCKFYQGAEDKALERQLKELFQNVHREKPE 280
Query: 210 ASRAESVEMFLLAKGFR 226
+SR+ES E + + +
Sbjct: 281 SSRSESKEAYFIGLRRK 297
>gi|224035899|gb|ACN37025.1| unknown [Zea mays]
Length = 202
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 58/186 (31%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT- 89
++ D Y ++A+ EGWRARSA+KLLQI+++ I + +VDL ++PGSWSQV +R
Sbjct: 5 SKDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKHVVDLCAAPGSWSQVLSRNLY 64
Query: 90 --------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+ +VAID+ M PI GV + D + + + + + G DLV+
Sbjct: 65 VPAKQSSDCKEGDLPLIVAIDLQPMAPIEGVIQVQGDITNARTADVVIRHFDGCKADLVV 124
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
D A G +D L AA +L +GG F+ K F+G T+ + ++
Sbjct: 125 CDGAPDVTGLHDMDEFVQSQLILAALAIVTHVLKVGGKFVAKIFRGKDTSLLY--CQRRL 182
Query: 201 QKVIHV 206
+ V
Sbjct: 183 RSVRTT 188
>gi|58697162|ref|ZP_00372584.1| FtsJ-like methyltransferase [Wolbachia endosymbiont of Drosophila
simulans]
gi|58536531|gb|EAL59899.1| FtsJ-like methyltransferase [Wolbachia endosymbiont of Drosophila
simulans]
Length = 168
Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 7/168 (4%)
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
++ K ++ Q ++I+DLG+SPG W QVA++ VVA+D+ M I GV+F +
Sbjct: 1 MDNKFKLFQEGQKIIDLGASPGGWLQVASQ------KGANVVALDVKPMNAINGVEFIQC 54
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
D ++ + D++LSDMA + G + +DH+R M LCEAA FA L+ GG
Sbjct: 55 DIINEFEI-LREKFKDQKFDVILSDMAPESCGLKSLDHIRIMLLCEAALNFAKHFLSHGG 113
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
F+VK FQG + D LKK F+ V + KP +SR+ES EM+L++ GF
Sbjct: 114 TFVVKIFQGESDKDFCNELKKMFKTVKYFKPKSSRSESTEMYLVSLGF 161
>gi|239609240|gb|EEQ86227.1| ribosomal RNA large subunit methyltransferase J [Ajellomyces
dermatitidis ER-3]
Length = 309
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 63/257 (24%), Positives = 98/257 (38%), Gaps = 59/257 (22%)
Query: 29 WLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR------------------- 69
W R D Y + A ++G ++R+A+KL+QINEKH+I + +
Sbjct: 41 WQARQAKDKYSREAAVKGLKSRAAFKLIQINEKHKIFKPGQSVVDLGYAPGSWSQVAVDL 100
Query: 70 -----RIVDLGSSPGSWSQVAARITGS---------------NANNTRVVAIDILDMEPI 109
R+V + P + + I G+ N N R +++ D
Sbjct: 101 TQPKGRVVGVDIIPAQPPKGVSTIQGNFLSPQIQAYVQEFLRNPNRGRAQSLNHFDDADP 160
Query: 110 LG-------VKFFKFDFLDLDSWEFIRQAIGGNPDL-------------VLSDMAYPTIG 149
V+ + S + G + VLSDM T G
Sbjct: 161 RSQPQADSEVEETEGYIDRERSASLHIAQVDGGNEDIPDIAVADKTVDVVLSDMMMNTSG 220
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
DH +M LC AA F+ +L GG F+ K +QG + LK+ FQ V KP
Sbjct: 221 MSFRDHAGSMDLCRAALEFSFNVLKTGGHFVCKFYQGAEDKALERQLKELFQNVHREKPE 280
Query: 210 ASRAESVEMFLLAKGFR 226
+SR+ES E + + +
Sbjct: 281 SSRSESKEAYFIGLRRK 297
>gi|296828096|ref|XP_002851274.1| ribosomal RNA methyltransferase MRM2 [Arthroderma otae CBS 113480]
gi|238838828|gb|EEQ28490.1| ribosomal RNA methyltransferase MRM2 [Arthroderma otae CBS 113480]
Length = 292
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 103/263 (39%), Gaps = 58/263 (22%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL---------------- 65
SS+ W R D Y + A ++G ++R+A+KLLQIN+++++
Sbjct: 23 RSISSKQWQARQGKDTYTKEAGMQGLKSRAAFKLLQINDRYRLFKSGQTVVDLGYAPGSW 82
Query: 66 --------QSNRRIVDLGSSPGSWSQVAARITGS-------------------NANNTRV 98
+ R+V + P + + I G+ +++
Sbjct: 83 SQVAFNLTKPRGRVVGVDIIPAQPPRGVSTIQGNFLSPRVQEYVKDFVRDPHRGRPRSQL 142
Query: 99 VAIDILDMEPIL-------GVKFFKFDFLDLDSWEFI--------RQAIGGNPDLVLSDM 143
+ G + + E R A G+ D+VLSDM
Sbjct: 143 STFTDQEETAPNPDPENDEGYIDLERSSSAHINKEERGEESNQPLRNARVGSVDVVLSDM 202
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G + DHL +M LC+AA FA +L GG F+ K +QG + LK+ F +V
Sbjct: 203 LMNTSGTKSRDHLGSMELCKAALDFASVVLKQGGHFVCKYYQGSGEKEFENELKRLFYRV 262
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
KP +SR+ES E + + R
Sbjct: 263 YREKPDSSRSESKEAYFIGIRRR 285
>gi|56758278|gb|AAW27279.1| SJCHGC04749 protein [Schistosoma japonicum]
Length = 260
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 34/230 (14%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH--QILQSNRRIVDLGS 76
RS GSS+ W+ R +DPYV+ A+LE +R RSA+KLLQ+NEK + + ++D G+
Sbjct: 29 VRSNHGSSQRWIARQRSDPYVKHARLESYRCRSAFKLLQLNEKIYGGLFKPGDIVIDCGA 88
Query: 77 SPGSWSQVA----ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS-------- 124
+PGSW QVA ++ N ++A D+L+ + GV L+ S
Sbjct: 89 APGSWCQVASSLINSNDNNSNNQGLIIAFDLLNFAQLPGVSIHSGIDLNNWSECINLINQ 148
Query: 125 ------------WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEM 172
Q + D+VLSD+A G R ID M L + +
Sbjct: 149 SISNHFINNNNRQLQDIQKLLPAVDVVLSDIAPNVTGIRDIDIPAMMKLAYNILRVTISV 208
Query: 173 LNIGGDFLVKTFQGGTTNDILCLLKKHF--------QKVIHVKPVASRAE 214
G F++K F+ + + + + +KP ASR
Sbjct: 209 SKQGASFVIKLFESPEAEEFKQTVSQFYTFNSSKYSSFTRFIKPAASRKR 258
>gi|71006594|ref|XP_757963.1| hypothetical protein UM01816.1 [Ustilago maydis 521]
gi|46097464|gb|EAK82697.1| hypothetical protein UM01816.1 [Ustilago maydis 521]
Length = 346
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 100/268 (37%), Gaps = 73/268 (27%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR--------------------- 69
+ D Y ++ + EG+RARSAYKLL +NE++ L
Sbjct: 5 TKDKRDIYYRQGKSEGYRARSAYKLLHLNEQYGFLGGAEDYALDAGAASTCASSSDSANA 64
Query: 70 -------------RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFK 116
R+VDL ++PGSWSQV +R S + +VA+D+ M P+ GV
Sbjct: 65 PKTTSEKRFQTPTRVVDLCAAPGSWSQVLSRRLASVPG-SHLVAVDLQAMAPLPGVTQII 123
Query: 117 FDFLDLDSWE-----------------FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
D + + + L++ D A G +D
Sbjct: 124 GDITTPATADAVSTALSDGPLSNSTCVKGKGKGKARAQLIVCDGAPDVTGLHDLDEYLQS 183
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQ-------GGTTN--------------DILCLLKK 198
L AAT +L IGG F+ K F G + + L+
Sbjct: 184 QLLLAATQITFRLLEIGGTFVAKIFTQHPQAGLGASLGNMDLKAARPATSGALLADQLRT 243
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F +V KP +SR SVE FL+ GF+
Sbjct: 244 FFDRVDIAKPRSSRLGSVEHFLVCLGFK 271
>gi|195567038|ref|XP_002107082.1| GD17262 [Drosophila simulans]
gi|194204479|gb|EDX18055.1| GD17262 [Drosophila simulans]
Length = 204
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
D + Q A+ G R+R+A+KL+Q+N K LQ ++ +DL ++PG W QVA + +
Sbjct: 11 RKDKFYQLAKETGLRSRAAFKLIQLNRKFGFLQQSQVCLDLCAAPGGWMQVAKQNMPVS- 69
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ V+ +D+ + PI G D + ++ D+VL D A +
Sbjct: 70 --SIVIGVDLFPIRPIAGCIGLVEDITTEKCRQSLTKELQSWKADVVLHDGAPNVGRNWL 127
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
D + + L A + + L GG F+ K F+ N +L +LK+ F+K K
Sbjct: 128 YDAYQQICLTLNALKLSTQFLRNGGWFVTKVFRSKDYNALLWVLKQLFKKFQVQK 182
>gi|212528768|ref|XP_002144541.1| cell division protein ftsj, putative [Penicillium marneffei ATCC
18224]
gi|210073939|gb|EEA28026.1| cell division protein ftsj, putative [Penicillium marneffei ATCC
18224]
Length = 846
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 102/273 (37%), Gaps = 67/273 (24%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL--------------- 65
SS+ W +R +D + + A + G ++R+A+KLL+I+E+++I
Sbjct: 562 KRFSSSKRWQSRQRSDMFTREAVVRGLKSRAAFKLLEIDEQYRIFRSGQTVVDLGYAPGS 621
Query: 66 ---------QSNRRIVDLGSSPGSWSQVAARITGS---------------NANNTR---- 97
+ N R++ + P + + I G+ + + R
Sbjct: 622 WSQVAVTRTKPNGRVLGVDIIPAQPPKGVSTIQGNFLSPNIQEYVLEFVRDPDRGRPRLP 681
Query: 98 ---VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM----------- 143
V + L + + + E + D+VLSDM
Sbjct: 682 APPVDEAEHLTADNDATILRESSAAGNDKGKEENGKQKERTVDVVLSDMSAPWAQVQGFS 741
Query: 144 ----------AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDIL 193
T G DH +M LC AA F+ +L GG F+ K +QG
Sbjct: 742 NRSLSNPYRRMMNTSGIAFRDHAGSMDLCRAALQFSFNVLKAGGHFVCKFYQGPEDKLFE 801
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LK F+KV +KP +SR+ES E F +A +
Sbjct: 802 KQLKALFEKVHRLKPESSRSESREAFFVAMARK 834
>gi|196011812|ref|XP_002115769.1| hypothetical protein TRIADDRAFT_59807 [Trichoplax adhaerens]
gi|190581545|gb|EDV21621.1| hypothetical protein TRIADDRAFT_59807 [Trichoplax adhaerens]
Length = 807
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 4/173 (2%)
Query: 38 YVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTR 97
+ + A+ G+RARSA+KL+Q+N K Q L+++R +VDL ++PG W QVA+R + +
Sbjct: 15 FYKLAKETGYRARSAFKLIQLNRKFQFLETSRVLVDLCAAPGGWLQVASRFMPIS---SL 71
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDS-WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHL 156
+V +D++ ++PI V D ++ D VL D A D
Sbjct: 72 IVGVDLVTIKPIPNVITLTGDITTDACKQAIKKELHTWKADSVLHDGAPNVGQAWVQDAF 131
Query: 157 RTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
L +A A ++L GG F+ K F+ ++ + ++ F+KV KP
Sbjct: 132 SQAQLTLSALRLACQLLKRGGCFITKVFRSKDYYSLMWVFQQLFKKVHATKPQ 184
>gi|321248436|ref|XP_003191127.1| cell division protein [Cryptococcus gattii WM276]
gi|317457594|gb|ADV19340.1| cell division protein, putative [Cryptococcus gattii WM276]
Length = 255
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 34/240 (14%)
Query: 21 SCQGSSRDWLNRHINDPYVQR-------AQLEGWRARSAYKLLQINEKHQIL-QSNRRIV 72
SS WL R DPYV++ + +R+RS++KL+ + + H IL + + +V
Sbjct: 9 KSSSSSNRWLARQSRDPYVRQRVGTPSSSSQPSYRSRSSFKLVSLAKSHPILSRETKSVV 68
Query: 73 DLGSSPGSWSQVAARITGSNAN---NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
DLG++PG WSQVAA + G + RV AIDIL M+PI V+ + DFL E ++
Sbjct: 69 DLGAAPGGWSQVAAHLLGVDKKLTSKPRVWAIDILPMDPIPAVRTLQGDFLSSSVRETLQ 128
Query: 130 QAIG-----GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN---------- 174
+G G D VLSDM P G R D ++ LC AAT FA +L
Sbjct: 129 SLVGTPESGGGVDTVLSDMMAPMTGVRTRDVGLSLELCAAATAFARGVLKQASKEDEVKI 188
Query: 175 -------IGGDFLVKTFQGGTTNDILCL-LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG+ ++K F ++ L L + F KV+ KP SR+ES E + + GF+
Sbjct: 189 IKGKKVWPGGNLVMKFFAHPDLDEFRRLELDQWFGKVVVEKPKESRSESSEAYWVCLGFK 248
>gi|213162026|ref|ZP_03347736.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 128
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YVQ+AQ +G R+R+ +KL +I + ++ + +VDLG+
Sbjct: 1 MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-GGN 135
+PG WSQ G R++A D+L M+PI+GV F + DF D + + + +
Sbjct: 61 APGGWSQYVVTQIGGK---GRIIACDLLPMDPIVGVDFLQGDFRDELVMKALLERVGDSK 117
Query: 136 PDLVLSDMAYP 146
+V+SDMA
Sbjct: 118 VQVVMSDMAPN 128
>gi|303286059|ref|XP_003062319.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455836|gb|EEH53138.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 231
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 29/222 (13%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
+ D Y + A+ G+ ARSA+KLL+++++ IL+ ++DLG PG+W+QVA R G
Sbjct: 10 LTDFYAKEAKRLGYVARSAFKLLELSDRFGILRKGAHVLDLGCHPGAWTQVACRALGHPD 69
Query: 94 NNTRVVAIDILD------MEPILGVKFFKFDFLDLDSWEFI------------------- 128
V+ +D+ + +F D L
Sbjct: 70 EGGGVLGVDLRETELGTLRHVDRRARFAVADATTLCEKRLRALRGGDGDGDGDGDGDESI 129
Query: 129 -RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL-EMLNIGGDFLVKTFQG 186
+ +VLSDMA T G +D R+ L EAA AL E GG +VK +G
Sbjct: 130 ATRRRTRPFTVVLSDMAPSTTGAADVDAARSYELAEAAVRIALGERALDGGSLVVKLLEG 189
Query: 187 G--TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
D+ + + F +V +P A+R +S E+FL+A+G R
Sbjct: 190 PGGGKADLQAVCARAFDRVRWYRPRATRRDSSEVFLVARGRR 231
>gi|170096322|ref|XP_001879381.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645749|gb|EDR09996.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 249
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 28/226 (12%)
Query: 29 WLNRHINDPYVQR--AQLEGWRARSAYKLLQINEKHQIL--QSN-RRIVDLGSSPGSWSQ 83
W+ R DPYV++ + +R+RSA+KLL+IN++ + + + +VDLG++PG WSQ
Sbjct: 20 WIARQARDPYVKKRLSDPASYRSRSAFKLLEINDQWDSFLTKPDVKAVVDLGAAPGGWSQ 79
Query: 84 VAARITGSNA--------NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
V + +VA+D+L M+PI GV + DFL ++ I +
Sbjct: 80 VPYDPLNIDDLEPSSALTGRGTIVAVDLLKMQPIHGVHAIQADFLAAETERRIHNLLSVK 139
Query: 133 ---GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEM--------LNIGGDFLV 181
D++LSD+A G+ D ++ +CEA FA + GG L+
Sbjct: 140 GNLECKADIILSDIAANASGNDVHDIESSLEICEAVFCFARQYLRSAERIGRRRGGVLLM 199
Query: 182 KTFQGGTTNDI-LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F+ + L +F V ++KP +SR+ S E + L +G++
Sbjct: 200 KHFEHPLLQKFRVEKLLPNFHDVRYIKPDSSRSASREGYFLCQGWK 245
>gi|325142054|gb|EGC64483.1| FtsJ-like methyltransferase family protein [Neisseria meningitidis
961-5945]
Length = 120
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ WL+ H+ND YV AQ +G+RAR+AYKLL+INEK ++++ + DLGS+PGSW
Sbjct: 4 RSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKDKLIKPGTVLADLGSAPGSW 63
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
SQVAA++TG++ V A+DIL ME I GV F + DF + D
Sbjct: 64 SQVAAKLTGTSGA---VFALDILPMEAIGGVSFIQGDFRENDVLAQFE 108
>gi|167947654|ref|ZP_02534728.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 175
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 68/156 (43%), Positives = 97/156 (62%), Gaps = 4/156 (2%)
Query: 65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
++ R+VDLG++PG WSQVA + G RVVA+DIL+M+PI GV + DF +
Sbjct: 1 IKPGMRVVDLGAAPGGWSQVARDLVGEK---GRVVALDILEMDPIAGVTIIQGDFREEGP 57
Query: 125 WEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+R+ + G P DLV+SDMA G +D R+M LCE A FA E+L GG F+VK
Sbjct: 58 LAQLREQLAGEPVDLVISDMAPNVTGMVTVDQPRSMYLCELALDFAKEVLRPGGGFVVKV 117
Query: 184 FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
FQG +D L +++ F +V+ KP +SRA+S E++
Sbjct: 118 FQGEGFDDYLREMRQAFGRVVSRKPRSSRAKSREIY 153
>gi|27545053|gb|AAO18459.1| putative FtsJ cell division protein [Oryza sativa Japonica Group]
Length = 403
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 34/223 (15%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + AQ G+ ARSA+KL+QI ++H+++ ++DLG +PG+W QVA + G
Sbjct: 9 DFFYREAQRLGYVARSAFKLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKG 68
Query: 96 TRVVAIDILDM-----EPILGVKFFKFDFLDLD-SWEFIRQAIGGNPDLVLSDMAYPTIG 149
+V +D+ + V+ D + L ++LSDM G
Sbjct: 69 GVIVGVDVKKVKVPSAHCDSRVRTVCADVMALMKQQARAMSPQERGFSVILSDMCPVVSG 128
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGG----------------------------DFLV 181
D + L A A+ + ++
Sbjct: 129 ITTKDAAISCELGMRALSLAVGKMKAKDSDCIAILEKFQSSTEPDPDEDGILRRGGSLVI 188
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
K + K+ F+KV ++P A+R+ S E+F++ +G
Sbjct: 189 KFLENEDIPGFGKFCKEKFKKVSLLRPKATRSSSREIFMVCEG 231
>gi|153217144|ref|ZP_01950908.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
1587]
gi|124113837|gb|EAY32657.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
1587]
Length = 162
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D YV A+ +G+R+R+ +K+ +I K ++L++ +VDLG+
Sbjct: 1 MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGN 135
+PG WSQ AA++ G RV+A D+L ME I GV F + DF + + +
Sbjct: 61 APGGWSQFAAKVVGEG---GRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDM 117
Query: 136 PDLVLSDMA 144
D+V+SDMA
Sbjct: 118 VDVVMSDMA 126
>gi|115456267|ref|NP_001051734.1| Os03g0822300 [Oryza sativa Japonica Group]
gi|108711810|gb|ABF99605.1| FtsJ-like methyltransferase family protein, putative, expressed
[Oryza sativa Japonica Group]
gi|113550205|dbj|BAF13648.1| Os03g0822300 [Oryza sativa Japonica Group]
gi|218194004|gb|EEC76431.1| hypothetical protein OsI_14112 [Oryza sativa Indica Group]
gi|222626068|gb|EEE60200.1| hypothetical protein OsJ_13158 [Oryza sativa Japonica Group]
Length = 233
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 34/225 (15%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + AQ G+ ARSA+KL+QI ++H+++ ++DLG +PG+W QVA + G
Sbjct: 9 DFFYREAQRLGYVARSAFKLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKG 68
Query: 96 TRVVAIDILDM-----EPILGVKFFKFDFLDLD-SWEFIRQAIGGNPDLVLSDMAYPTIG 149
+V +D+ + V+ D + L ++LSDM G
Sbjct: 69 GVIVGVDVKKVKVPSAHCDSRVRTVCADVMALMKQQARAMSPQERGFSVILSDMCPVVSG 128
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGG----------------------------DFLV 181
D + L A A+ + ++
Sbjct: 129 ITTKDAAISCELGMRALSLAVGKMKAKDSDCIAILEKFQSSTEPDPDEDGILRRGGSLVI 188
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K + K+ F+KV ++P A+R+ S E+F++ +G R
Sbjct: 189 KFLENEDIPGFGKFCKEKFKKVSLLRPKATRSSSREIFMVCEGLR 233
>gi|297460745|ref|XP_002701220.1| PREDICTED: FtsJ homolog 1-like [Bos taurus]
Length = 291
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/160 (35%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE 126
R VDL ++PGSWSQV ++ G + VVA+D+ M P+ GV + D L + +
Sbjct: 3 GVTRAVDLCAAPGSWSQVLSQKIG-GQGSGHVVAVDLQAMAPLPGVLQIQGDITQLSTAK 61
Query: 127 FIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
I Q G P DLV+ D A G +D L AA A +L GG F+ K F+
Sbjct: 62 EIIQHFEGCPADLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFR 121
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G I L+ F V+ KP +SR S+E F + KG+
Sbjct: 122 GRDVTLIYSQLRVFFSSVLCAKPRSSRNSSIEAFAVCKGY 161
>gi|72044279|ref|XP_798087.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115977311|ref|XP_001185839.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 649
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANN----TRVVAIDILDMEPILGVKFFKFDFLD 121
+S ++VDL ++PGSWSQV +R + T++VA+D+ M P+ GV + D
Sbjct: 4 KSVTKVVDLCAAPGSWSQVLSRKLSRKEDGSYEGTKIVAVDLQAMAPLPGVIQLQGDITK 63
Query: 122 LDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
+ I G DLV+ D A G ID L AA +L G F+
Sbjct: 64 ESTANEIVSHFEGEKADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKPQGTFV 123
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
K F+G + LK F +V KP +SR S+E F++ + +
Sbjct: 124 AKIFRGKDVTLLYSQLKIFFPQVTIAKPRSSRNSSIEAFVVCQRY 168
>gi|241997876|ref|XP_002433581.1| cell division protein FtsJ, putative [Ixodes scapularis]
gi|215495340|gb|EEC04981.1| cell division protein FtsJ, putative [Ixodes scapularis]
Length = 274
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 59 NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
+ ++ ++ VDL ++PGSWSQV +R + + ++VA+D+ M P+ GV + D
Sbjct: 1 DTTFELCPGVKKAVDLCAAPGSWSQVLSRKLRYDYD-VKIVAVDLQAMAPLPGVIQLQGD 59
Query: 119 FLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
++ + I G DLV+ D A G ID L +A +L GG
Sbjct: 60 ITEISTARKIINHFEGEKADLVVCDGAPDVTGLHDIDEYIQAELLLSALNITTHILKDGG 119
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK------GFR 226
++ K F+G T + LK F+ V+ KP +SR S+E F++ + G++
Sbjct: 120 TYVAKIFRGKDTTLLYAQLKLFFKHVVVAKPRSSRNSSIESFVVCQVYSPPEGYK 174
>gi|197725282|pdb|3DOU|A Chain A, Crystal Structure Of Methyltransferase Involved In Cell
Division From Thermoplasma Volcanicum Gss1
Length = 191
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
R+R+A+KL + +++++++ ++++GSSPG W+QV + ++++ID+ +
Sbjct: 5 LRSRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSLAR------KIISIDLQEX 58
Query: 107 EPILGVKFFKFDFLDLDSWEFI----RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
E I GV+F + D ++ I R+ D V+SD G DH + +
Sbjct: 59 EEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAXAKVSGIPSRDHAVSYQIG 118
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ A+ L GG+ L+K FQG TND + + +K+F KP ASR S E+++
Sbjct: 119 QRVXEIAVRYLRNGGNVLLKQFQGDXTNDFIAIWRKNFSSYKISKPPASRGSSSEIYIXF 178
Query: 223 KGFR 226
GF+
Sbjct: 179 FGFK 182
>gi|66824025|ref|XP_645367.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
gi|74860452|sp|Q86AH1|RRMJL_DICDI RecName: Full=Probable ribosomal RNA methyltransferase fsjB;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
fsjB
gi|60473489|gb|EAL71433.1| rRNA methyltransferase [Dictyostelium discoideum AX4]
Length = 640
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 101/253 (39%), Gaps = 57/253 (22%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
DW+ R + DPYV AQ +R+AYK++ I+E+ Q+ + + +VDLG++PG WS+
Sbjct: 388 NDWMKRQMTDPYVAMAQKNDLISRAAYKIINIDEQIQLFKPGQIVVDLGAAPGGWSKYIQ 447
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA--------------- 131
N V+++D + F DF ++ I +
Sbjct: 448 ERV---TNRGLVISVDTSSNFQLDKDCFIHGDFTLTETQNKIFELTKFKSLNDLKLYKHS 504
Query: 132 ----------------------------------IGGNPDLVLSD-----MAYPTIGHRK 152
+ D MA G ++
Sbjct: 505 LIHSDSKIQNLIENGGANGNGSGNGDLQKQPIDNMFKQKSACYVDVVVSDMAPSYSGLQQ 564
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+DH R + L A FFA + L GG F+ K +GG LL+ +F V +KP ASR
Sbjct: 565 VDHSRLIDLQRLALFFAFKTLKKGGTFVCKVSRGGEEKKFFKLLESNFISVKSMKPGASR 624
Query: 213 AESVEMFLLAKGF 225
+ES E++ + K +
Sbjct: 625 SESTEIYYIGKNY 637
>gi|242765533|ref|XP_002340993.1| ftsj, putative [Talaromyces stipitatus ATCC 10500]
gi|218724189|gb|EED23606.1| ftsj, putative [Talaromyces stipitatus ATCC 10500]
Length = 814
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 62/278 (22%), Positives = 99/278 (35%), Gaps = 70/278 (25%)
Query: 19 NRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL------------- 65
N SS+ W +R +D + + A + G ++R+A+KLLQI+E+++I
Sbjct: 525 NFKRFSSSKRWQSRQRSDIFTREAVVRGLKSRAAFKLLQIDEQYRIFRRGQTVVDLGYAP 584
Query: 66 -----------QSNRRIVDLGSSPGSWSQVAARITG-----------------SNANNTR 97
+ N R++ + P + + I G N R
Sbjct: 585 GSWSQVAVTRTKPNGRVLGVDIIPAQPPKGVSTIQGNFLSPDIQEYVLEFVRDPNRGRPR 644
Query: 98 VVAIDILDMEPI---LGVKFFKFDFLDLDSWEFIRQAIGGNPDL-----VLSDM------ 143
+ + + I + + + G VLSDM
Sbjct: 645 LPTLSPEEPGRIAADDDSTVLEALSESAVTASEKGKEENGLQKERTVDVVLSDMSAPWAQ 704
Query: 144 ---------------AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
T G DH +M LC AA F+ +L GG F+ K +QG
Sbjct: 705 VKGFSNRSLSNPYRRMMNTSGISFRDHAGSMDLCRAALQFSFNVLKPGGHFVCKFYQGPE 764
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LK F+KV +KP +SR+ES E F +A +
Sbjct: 765 DKVFEKQLKALFEKVHRLKPESSRSESREAFFVAMTRK 802
>gi|260900673|ref|ZP_05909068.1| ribosomal RNA large subunit methyltransferase J [Vibrio
parahaemolyticus AQ4037]
gi|308110887|gb|EFO48427.1| ribosomal RNA large subunit methyltransferase J [Vibrio
parahaemolyticus AQ4037]
Length = 122
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WL H +D Y A+ +G+R+R+ +K+ +I K ++L+ +VDLG+
Sbjct: 1 MSKQKHSASSGRWLKEHFDDKYANEARKKGYRSRAYFKIDEIQTKDKLLKPGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP 136
+PG WSQ AA+I G ++ +++A D+L M+PI GV F + DF D E + I
Sbjct: 61 APGGWSQYAAKIVG---DSGQIIACDLLPMDPIAGVSFLQGDFRDDAVLEALLDRIQPLM 117
Query: 137 DLVL 140
V+
Sbjct: 118 VDVV 121
>gi|51598573|ref|YP_072761.1| cell division protein [Borrelia garinii PBi]
gi|81610080|sp|Q661V2|RLME_BORGA RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|51573144|gb|AAU07169.1| cell division protein [Borrelia garinii PBi]
Length = 192
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 101/195 (51%), Gaps = 5/195 (2%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
H+ D Y Q+A+ EG+ ARS YKL++INEK + S ++D+G+SPGS+SQ A +
Sbjct: 3 HLGDEYSQKAKREGYLARSVYKLIEINEKFSLFSSG-NVLDIGASPGSFSQYAYKKLKRG 61
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ + L + F K D D+ I + G LV+SD+A T G+R
Sbjct: 62 VLVSVDINDISLRY--VNNFYFIKGDIFSDDTASKINKF--GPYSLVISDVAPKTTGNRL 117
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+D + +L + E+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 118 VDTSNSFNLNMRIIDLSFEVLLKKGNLLVKVFQGGDEMQIFKKFEKYFKFVKKIRPKAVR 177
Query: 213 AESVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 178 KNSFEIYFLGKSFGK 192
>gi|226469918|emb|CAX70240.1| FtsJ homolog 1 [Schistosoma japonicum]
Length = 189
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-----SNRRIVDLGSSPGSWSQVA 85
+R D Y + A+ EGWRARSAYKLLQI++++ IL R+VDL ++PGSWSQV
Sbjct: 5 SRDKRDIYYRLAKEEGWRARSAYKLLQIDDEYGILSSTENIPLERVVDLCAAPGSWSQVL 64
Query: 86 ARIT-----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLV 139
++ + ++VA+D+ M PI GV + D D+ + I + G LV
Sbjct: 65 SKRLWESKSPDDRKFVKIVAVDLQAMAPIPGVIQIQGDITSQDTAQQIIKHFSGKLAQLV 124
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ D A G +D L AA +L +GG F+ K
Sbjct: 125 VCDGAPDVTGLHDLDEYVQSHLILAALTICSRVLELGGTFVAKV 168
>gi|161899253|ref|XP_001712853.1| Sbp1 [Bigelowiella natans]
gi|75756346|gb|ABA27241.1| Sbp1 [Bigelowiella natans]
Length = 286
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 35 NDPYVQRAQLEGW------RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+ + + ++ + R+RSA+KL+QI +K +L+ RI+DL PG W Q+ +
Sbjct: 38 KEKFFRLSKKFKYLYFHSFRSRSAFKLIQIEKKFNLLRFTNRIIDLCCFPGGWLQIIQLL 97
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG-NPDLVLSDMAYPT 147
+ +V +D++ ++P+ V F K + + + G D +L+D +
Sbjct: 98 AKRSY---LIVGVDLVKIKPLQSVIFIKMSIRSPMLYPALNKISKGAYYDCLLNDGSPNV 154
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVK 207
ID L + A+++L GG + K F N + LL+ F+ VI +K
Sbjct: 155 GTENIIDSEMQNGLAFFSFKIAIKVLRDGGSLVSKFFISKNLNIFIYLLRILFKYVIILK 214
Query: 208 PVASRAESVEMFLL---AKGFRK 227
P ASR S E+++L GF+K
Sbjct: 215 PNASRVHSSEVYILNFNFSGFKK 237
>gi|1750389|gb|AAB39254.1| FtsJ homolog [Pseudomonas aeruginosa PAO1]
Length = 106
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+S+ WL H +DPYV+ AQ + +R+R++YKLL+I EK +IL+ +VDLG+ PG W
Sbjct: 3 RSKTSQRWLKEHFDDPYVKMAQRDAYRSRASYKLLEIQEKDRILRPGMTVVDLGAGPGGW 62
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF 127
SQV +R+ G + R++A DIL+M+ I V F + DF + +
Sbjct: 63 SQVTSRVIG---DRGRLIASDILEMDSIPDVTFIQGDFTEDAVFAR 105
>gi|326435959|gb|EGD81529.1| tRNA 2'-O-ribose methyltransferase [Salpingoeca sp. ATCC 50818]
Length = 216
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ +GWRARSA+KLLQ++ + + +++VDL ++PGSWSQV
Sbjct: 4 SSKD-----RRDVYYRLAKEQGWRARSAFKLLQLDTQFDLFSGVKKVVDLCAAPGSWSQV 58
Query: 85 AARITGSNAN-NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSD 142
R + + +VVA+D+ M P+ G+ + D + I G DLV+ D
Sbjct: 59 LQRKLKPQEDEDVKVVAVDLQAMAPLDGIIQMQGDITKESTATAIVDHFEGEKADLVICD 118
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
A G ID L AA +L GG F+ K + T +
Sbjct: 119 GAPDVTGLHDIDEYVQAQLLLAALNITTHVLKPGGTFVAKACEMKRTTAL 168
>gi|216263778|ref|ZP_03435772.1| ribosomal RNA large subunit methyltransferase J [Borrelia afzelii
ACA-1]
gi|215979822|gb|EEC20644.1| ribosomal RNA large subunit methyltransferase J [Borrelia afzelii
ACA-1]
Length = 192
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
+ND Y Q+A+ EG+ ARS YKL++INEK + ++D+G+SPGS+SQ A +
Sbjct: 3 RLNDEYSQKAKREGYLARSVYKLIEINEKFSLFSYG-NVLDIGASPGSFSQYAYKKLKRG 61
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ L + F K D D+ I G LV+SD A T G+R
Sbjct: 62 ILVAVDINDIGLR--HVDNFYFVKGDIFSDDTVFKINTL--GPYSLVISDAAPRTTGNRL 117
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+D + +L +LE+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 118 VDTSNSFNLSMRIIDLSLEVLLKKGNLLVKVFQGGDEIQIFKKFEKYFKFVKKIRPKAVR 177
Query: 213 AESVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 178 KNSFEIYFLGKSFGK 192
>gi|156086912|ref|XP_001610863.1| rRNA methyltransferase [Babesia bovis T2Bo]
gi|154798116|gb|EDO07295.1| rRNA methyltransferase, putative [Babesia bovis]
Length = 339
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 60/289 (20%), Positives = 96/289 (33%), Gaps = 93/289 (32%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN---------------------- 68
+ D Y ++A+ +G+RARS YKL+QI + + I
Sbjct: 5 TKENRDVYYRKAKEDGYRARSVYKLIQIFQAYGIFHPIARIEQVTEILRNAKCKHCCPGD 64
Query: 69 --------------------------RRIVDLGSSPGSWSQ------------------- 83
R +VDL ++PGSW+Q
Sbjct: 65 NLANVRKFDILEQRGNSYDCSSLPRIRNVVDLCAAPGSWTQCIRDFVYNEYFVYKDAAKN 124
Query: 84 ------VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP- 136
+ + S ++A+D+ +M P+ GV+ K D + E I+ N
Sbjct: 125 LAENNTLCVKKVESCNLKPVIIAVDLQEMAPVKGVQILKGDITNEQVMEKIKNLFVENVS 184
Query: 137 -------------------DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
++ D A G + D L AA +L+ G
Sbjct: 185 KRLLETTEDNSELADSSLAQIITCDGAPDVSGVHQTDAYVQSCLIRAAISVCSAILDPNG 244
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K F + I + F KP ASR S E F++A+GF+
Sbjct: 245 LFVCKAFCNDSDAPIYRHVNIFFDDFSIHKPAASRLTSAECFVIARGFK 293
>gi|257471440|ref|ZP_05635439.1| cell division protein FtsJ [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|311086120|gb|ADP66202.1| cell division protein FtsJ [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086693|gb|ADP66774.1| cell division protein FtsJ [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087790|gb|ADP67869.1| cell division protein FtsJ [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 154
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
++DLG++PGSWSQ A+ G R++A DIL + PI GV F+ DF + + +
Sbjct: 1 MNVIDLGAAPGSWSQYASNRIGKK---GRIIACDILPIRPITGVDIFQGDFRNKKTLNLM 57
Query: 129 RQAIGG-NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
LV+SDMA G+ ID R + LC+ A + +L+ G FL+K+FQG
Sbjct: 58 LNTFSNITFHLVMSDMAPNITGNFSIDMPRIIELCKLALKISEHVLSKNGIFLLKSFQGE 117
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
N++ +K F+K+ KP SR S E+F+LA
Sbjct: 118 GFNELYKEIKMLFKKIKICKPKTSRTRSREIFILAT 153
>gi|111115138|ref|YP_709756.1| cell division protein [Borrelia afzelii PKo]
gi|123047013|sp|Q0SNJ8|RLME_BORAP RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|110890412|gb|ABH01580.1| cell division protein [Borrelia afzelii PKo]
Length = 189
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
ND Y Q+A+ EG+ ARS YKL++INEK + ++D+G+SPGS+SQ A +
Sbjct: 2 NDEYSQKAKREGYLARSVYKLIEINEKFSLFSYG-NVLDIGASPGSFSQYAYKKLKRGIL 60
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ L + F K D D+ I G LV+SD A T G+R +D
Sbjct: 61 VAVDINDIGLR--HVDNFYFVKGDIFSDDTVFKINTL--GPYSLVISDAAPRTTGNRLVD 116
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
+ +L +LE+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 117 TSNSFNLSMRIIDLSLEVLIKKGNLLVKVFQGGDEIQIFKKFEKYFKFVKKIRPKAVRKN 176
Query: 215 SVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 177 SFEIYFLGKSFGK 189
>gi|219684632|ref|ZP_03539575.1| ribosomal RNA large subunit methyltransferase J [Borrelia garinii
PBr]
gi|219671994|gb|EED29048.1| ribosomal RNA large subunit methyltransferase J [Borrelia garinii
PBr]
Length = 192
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 66/195 (33%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
+ D Y Q+A+ EG+ ARS YKL++INEK + S ++D+G+SPGS+SQ A +
Sbjct: 3 RLGDEYFQKAKREGYLARSVYKLIEINEKFSLFSSG-NVLDIGASPGSFSQYAYKKLKRG 61
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ + L + F K D D+ I + G LV+SD+A T G+R
Sbjct: 62 VLVSVDINDISLRY--VDNFYFIKGDIFSDDTAYKINKF--GPYSLVISDVAPKTTGNRL 117
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+D + +L + E+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 118 VDTSNSFNLSMRIIDLSFEVLLKKGNLLVKVFQGGDEMQIFKKFEKYFKFVKKIRPKAVR 177
Query: 213 AESVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 178 KNSFEIYFLGKSFGK 192
>gi|15594658|ref|NP_212447.1| cell division protein (ftsJ) [Borrelia burgdorferi B31]
gi|218249912|ref|YP_002374835.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi ZS7]
gi|223889029|ref|ZP_03623620.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 64b]
gi|224533189|ref|ZP_03673789.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi WI91-23]
gi|224533742|ref|ZP_03674330.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi CA-11.2a]
gi|225549132|ref|ZP_03770107.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 94a]
gi|225550187|ref|ZP_03771147.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 118a]
gi|226320614|ref|ZP_03796174.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 29805]
gi|226321630|ref|ZP_03797156.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi Bol26]
gi|9910941|sp|O51293|RLME_BORBU RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|254809547|sp|B7J1P0|RLME_BORBZ RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|2688216|gb|AAC66697.1| cell division protein (ftsJ) [Borrelia burgdorferi B31]
gi|218165100|gb|ACK75161.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi ZS7]
gi|223885845|gb|EEF56944.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 64b]
gi|224511916|gb|EEF82317.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi WI91-23]
gi|224513035|gb|EEF83398.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi CA-11.2a]
gi|225369299|gb|EEG98752.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 118a]
gi|225370358|gb|EEG99796.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 94a]
gi|226232819|gb|EEH31572.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi Bol26]
gi|226234033|gb|EEH32754.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 29805]
Length = 192
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
++D Y ++A+ EG+ ARS YKL++INEK + S ++D+G+SPGS+SQ A +
Sbjct: 3 RLDDEYSKKAKREGYLARSVYKLIEINEKFSLFSSG-NVLDIGASPGSFSQYAYKKLKRG 61
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ + L + F K D D+ I LV+SD+A T G+R
Sbjct: 62 ILVSVDINDIGLRYD--DNFYFIKGDIFLDDTVFKINTF--KPYSLVISDVAPKTTGNRL 117
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+D + +L +LE+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 118 VDTSNSFNLSMRIIDLSLEVLLKKGNLLVKVFQGGDEMQIFKKFEKYFKFVKKIRPKAVR 177
Query: 213 AESVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 178 KNSFEIYFLGKSFGK 192
>gi|225552371|ref|ZP_03773311.1| ribosomal RNA large subunit methyltransferase J [Borrelia sp. SV1]
gi|225371369|gb|EEH00799.1| ribosomal RNA large subunit methyltransferase J [Borrelia sp. SV1]
Length = 192
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
++D Y ++A+ EG+ ARS YKL++INEK + S ++D+G+SPGS+SQ A +
Sbjct: 3 RLDDEYSKKAKREGYLARSVYKLIEINEKFSLFSSG-NVLDIGASPGSFSQYAYKKLKRG 61
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ + L + F K D D+ I LV+SD+A T G+R
Sbjct: 62 ILVSVDINDIGLRYD--DNFYFIKGDIFSDDTVFKINTFRP--YSLVISDVAPKTTGNRL 117
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+D + +L +LE+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 118 VDTSNSFNLSMRIIDLSLEVLLKKGNLLVKVFQGGDEMQIFKKFEKYFKFVKKIRPKAVR 177
Query: 213 AESVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 178 KNSFEIYFLGKSFGK 192
>gi|219685646|ref|ZP_03540461.1| ribosomal RNA large subunit methyltransferase J [Borrelia garinii
Far04]
gi|219672834|gb|EED29858.1| ribosomal RNA large subunit methyltransferase J [Borrelia garinii
Far04]
Length = 192
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
+ D Y Q+A+ EG+ ARS YKL++INEK + S ++D+G+SPGS+SQ A +
Sbjct: 3 RLGDEYFQKAKREGYLARSVYKLIEINEKFSLFSSG-NVLDIGASPGSFSQYAYKKLKRG 61
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ + L + F K D D+ I + G L++SD+A T G+R
Sbjct: 62 VLVSVDINDISLRY--VDNFYFIKGDIFSDDTAYKINKF--GPYSLIISDVAPKTTGNRL 117
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+D + +L + E+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 118 VDTSNSFNLSMRIIDLSFEVLLKKGNLLVKVFQGGDEMQIFKKFEKYFKFVKKIRPKAVR 177
Query: 213 AESVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 178 KNSFEIYFLGKSFGK 192
>gi|216264466|ref|ZP_03436458.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 156a]
gi|221217749|ref|ZP_03589217.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 72a]
gi|215980939|gb|EEC21746.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 156a]
gi|221192426|gb|EEE18645.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi 72a]
Length = 192
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 5/195 (2%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
++D Y ++A+ EG+ ARS YKL++INEK + S ++D+G+SPGS+SQ A +
Sbjct: 3 RLDDEYSKKAKREGYLARSVYKLIEINEKFSLFSSG-NVLDIGASPGSFSQYAYKKLKRG 61
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ + L + F K D D+ I LV+SD+A T G+R
Sbjct: 62 ILVSVDINDIGLRYD--DNFYFIKGDIFSDDTVFKINTF--KPYSLVISDVAPKTTGNRL 117
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+D + +L +LE+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 118 VDTSNSFNLSMRIIDLSLEVLLKKGNLLVKVFQGGDEMQIFKKFEKYFKFVKKIRPKAVR 177
Query: 213 AESVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 178 KNSFEIYFLGKSFGK 192
>gi|224534384|ref|ZP_03674962.1| ribosomal RNA large subunit methyltransferase J [Borrelia
spielmanii A14S]
gi|224514486|gb|EEF84802.1| ribosomal RNA large subunit methyltransferase J [Borrelia
spielmanii A14S]
Length = 192
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 66/195 (33%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
+ND Y Q+A+ EG+ ARS YKL++INEK + ++D+G+SPGS+SQ A +
Sbjct: 3 RLNDEYSQKAKREGYLARSVYKLIEINEKFSLFSYG-NVLDIGASPGSFSQYAYKKLKRG 61
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
+ L + F + D D+ I G LV+SD A T G+R
Sbjct: 62 VLVAVDINDIALRY--VDNFYFIRGDVFSYDTVFKINTL--GPYSLVISDAAPRTSGNRL 117
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
ID + +L + E+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 118 IDTSNSFNLSMRIIDLSFEVLLKKGNLLVKVFQGGDEVQIFKKFEKYFKFVKKIRPKAVR 177
Query: 213 AESVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 178 KNSFEIYFLGKSFGK 192
>gi|195941333|ref|ZP_03086715.1| cell division protein (ftsJ) [Borrelia burgdorferi 80a]
gi|312148291|gb|ADQ30950.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi JD1]
Length = 189
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/193 (33%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
+D Y ++A+ EG+ ARS YKL++INEK + S ++D+G+SPGS+SQ A +
Sbjct: 2 DDEYSKKAKREGYLARSVYKLIEINEKFSLFSSG-NVLDIGASPGSFSQYAYKKLKRGIL 60
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ + L + F K D D+ I LV+SD+A T G+R +D
Sbjct: 61 VSVDINDIGLRYD--DNFYFIKGDIFLDDTVFKINTF--KPYSLVISDVAPKTTGNRLVD 116
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
+ +L +LE+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 117 TSNSFNLSMRIIDLSLEVLLKKGNLLVKVFQGGDEMQIFKKFEKYFKFVKKIRPKAVRKN 176
Query: 215 SVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 177 SFEIYFLGKSFGK 189
>gi|312149324|gb|ADQ29395.1| ribosomal RNA large subunit methyltransferase J [Borrelia
burgdorferi N40]
Length = 189
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/193 (33%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
+D Y ++A+ EG+ ARS YKL++INEK + S ++D+G+SPGS+SQ A +
Sbjct: 2 DDEYSKKAKREGYLARSVYKLIEINEKFSLFSSG-NVLDIGASPGSFSQYAYKKLKRGIL 60
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
+ + L + F K D D+ I LV+SD+A T G+R +D
Sbjct: 61 VSVDINDIGLRYD--DNFYFIKGDIFSDDTVFKINTF--KPYSLVISDVAPKTTGNRLVD 116
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAE 214
+ +L +LE+L G+ LVK FQGG I +K+F+ V ++P A R
Sbjct: 117 TSNSFNLSMRIIDLSLEVLLKKGNLLVKVFQGGDEMQIFKKFEKYFKFVKKIRPKAVRKN 176
Query: 215 SVEMFLLAKGFRK 227
S E++ L K F K
Sbjct: 177 SFEIYFLGKSFGK 189
>gi|121715190|ref|XP_001275204.1| cell division protein ftsj [Aspergillus clavatus NRRL 1]
gi|119403361|gb|EAW13778.1| cell division protein ftsj [Aspergillus clavatus NRRL 1]
Length = 323
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/280 (23%), Positives = 101/280 (36%), Gaps = 75/280 (26%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR----------- 69
SS+ W R + D + + A ++G ++R+A+KLLQI+EK++I ++ +
Sbjct: 24 RRHSSSKRWQARQLRDQFTKAAAVQGLKSRAAFKLLQIDEKYRIFKNGQTVVDLGYAPGS 83
Query: 70 -------------RIVDLGSSPGSWSQVAARITGS------------------------- 91
R++ + P + + I G+
Sbjct: 84 WSQVAATRTQPNGRVLGVDIIPAQPPKGVSTIQGNFLDPEIQAYVQEFLRDPQRGRPRAL 143
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM-------- 143
+ +L I + DL A G D+VLSDM
Sbjct: 144 GQFPAAMHHNQVLISTTINNSLLGERSEADLRIDSQNDHASGRTVDVVLSDMSAPWYQTT 203
Query: 144 -------------AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
T G DH +M LC AA F+ + L GG F+ K +QG
Sbjct: 204 GFWKRSLSDPYNRMMNTSGMSFRDHAGSMDLCRAALRFSYDTLKAGGHFVCKFYQGAEDK 263
Query: 191 DILCLLKKHFQKVIHVKPVASRAES-----VEMFLLAKGF 225
D+ LK FQKV +KP +SR S ++ LL F
Sbjct: 264 DLEKQLKALFQKVHRIKPESSRTVSAQKLQRKLALLCTNF 303
>gi|218197285|gb|EEC79712.1| hypothetical protein OsI_21019 [Oryza sativa Indica Group]
Length = 868
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 7/171 (4%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D + A+ +G+R+R+A+KLLQ++ + + L + R ++DL ++PG W QVA
Sbjct: 7 KQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVA---VNH 63
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN----PDLVLSDMAYPT 147
VV +D++ + PI G D +R+ + N D+VL D +
Sbjct: 64 APVGAFVVGVDLVPIRPIRGAHSLTEDITTTKCRAAVRRLMDSNGVAAFDVVLHDGSPNV 123
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
G + SL A A L G F+ K F+ N I+ LK+
Sbjct: 124 GGAWAQEATAQSSLVIDAVRLATMFLAPKGAFITKVFRSQDYNAIMYCLKQ 174
>gi|119480445|ref|XP_001260251.1| ribosomal RNA large subunit methyltransferase J, putative
[Neosartorya fischeri NRRL 181]
gi|119408405|gb|EAW18354.1| ribosomal RNA large subunit methyltransferase J, putative
[Neosartorya fischeri NRRL 181]
Length = 252
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 3/149 (2%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS+ W R I D + + A ++G ++R+A+KLLQI+EK+ I +S + +VDLG +PGS
Sbjct: 25 KRHSSSKRWQARQIKDHFTRAAAVQGLKSRAAFKLLQIDEKYHIFKSGQTVVDLGYAPGS 84
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL 140
WSQVAA T N RV+ +DI+ +P GV + +FL D ++R+ +
Sbjct: 85 WSQVAATRTQPN---GRVLGVDIIPAQPPKGVSTIQGNFLTPDIQAYVREFLRDPCRGRP 141
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
+ + + E +
Sbjct: 142 RSPSPWDGDEHNNTTFSSTASLEHNSECI 170
>gi|325117088|emb|CBZ52640.1| KLLA0F18414p, related [Neospora caninum Liverpool]
Length = 393
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
G+ P S S VA ++ +VA+D+ ++ PI GV + D + + I
Sbjct: 158 TACDGTQPSSPSSVAESLSPPAP--PLIVAVDLQELAPIPGVYTLQADITHESTVKAILD 215
Query: 131 AIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
P DLV+ D A G ID L AA A ++L GG F+ KTF+G
Sbjct: 216 FFAQQPADLVICDGAPDVTGMHDIDEFIQAQLLFAALKVACKVLKPGGVFVCKTFRGEQI 275
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ LK F V KP ASR S+E FL+ +GFR
Sbjct: 276 PLVYLQLKTLFDAVRCCKPAASRNSSIEAFLVCRGFR 312
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS 67
L++ D Y +RA+ EG+RARSAYKLLQ++++ L
Sbjct: 4 LSKDRRDIYYRRAKEEGYRARSAYKLLQLDDELHFLSP 41
>gi|295674407|ref|XP_002797749.1| ribosomal RNA methyltransferase MRM2 [Paracoccidioides brasiliensis
Pb01]
gi|226280399|gb|EEH35965.1| ribosomal RNA methyltransferase MRM2 [Paracoccidioides brasiliensis
Pb01]
Length = 357
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 64/285 (22%), Positives = 98/285 (34%), Gaps = 80/285 (28%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI---NEKHQ--------------- 63
SS+ W R D Y + A ++G ++R+A+KLLQI ++ +
Sbjct: 62 RHSSSKRWQARQAKDRYSREAIVKGLKSRAAFKLLQINDKHKIFKVGQSVVDLGYAPGSW 121
Query: 64 ------ILQSNRRIVDLGSSPGSWSQVAARITGS---------------NANNTRV---- 98
+ Q N R+V + P + + I G+ N N RV
Sbjct: 122 SQVAVELTQPNGRVVGVDIIPAQPPKGVSTIQGNFLSPQVQAYVQEFLRNPNRGRVQRLN 181
Query: 99 -VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG---------------GNPDLVLSD 142
D + I G + + + D+VLSD
Sbjct: 182 HFENTDPDSQSITGYQIEESEGYIDRERSASSHITQVGGDAEDVSDTAMGDKTVDVVLSD 241
Query: 143 M---------------------AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV 181
M T G DH +M LC AA F+ +L GG F+
Sbjct: 242 MSAPWDQTTGFWKKSLSDPYHRMMNTSGMSFRDHAGSMDLCRAALEFSFNVLKTGGHFVC 301
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K +QG + LK+ FQ V KP +SR+ES E + + +
Sbjct: 302 KFYQGAEDKALERQLKELFQTVHREKPESSRSESKEAYFIGLRRK 346
>gi|90415764|ref|ZP_01223698.1| ribosomal RNA large subunit methyltransferase J [marine gamma
proteobacterium HTCC2207]
gi|90333087|gb|EAS48257.1| ribosomal RNA large subunit methyltransferase J [marine gamma
proteobacterium HTCC2207]
Length = 110
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/106 (40%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ +R W+ +H+ DPYVQ +Q +G+R+R++YKLL+I EK ++++ +VDLG++PG W
Sbjct: 2 AKSKNRSWIKQHVKDPYVQMSQKDGYRSRASYKLLEIIEKDRLIRPGMTVVDLGAAPGGW 61
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF 127
SQVA + G + RV A+D+L M+ I GV F DF + +
Sbjct: 62 SQVAMDLVG---HEGRVHALDLLPMDGIAGVDFILGDFTEDEILHE 104
>gi|325095423|gb|EGC48733.1| cell division cycle protein [Ajellomyces capsulatus H88]
Length = 854
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 4 PPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
P G S R + ++ SS+ W R D Y + A ++G ++R+A+KLLQIN++++
Sbjct: 532 PSGKSLGRKPRELIEISKRYSSSKRWQARQAKDKYSREAGVKGLKSRAAFKLLQINDRYK 591
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
I + + IVDLG +PGSWSQVA +T N RVV +DI+ +P GV + +FL L
Sbjct: 592 IFKPGQSIVDLGYAPGSWSQVAVDLTRPN---GRVVGVDIIPAQPPKGVSTIQGNFLSLQ 648
Query: 124 SWEFIRQAIGGNPD 137
++R+ +
Sbjct: 649 IQAYVREFLRNPNR 662
Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH +M LC AA F+ +L GG F+ K +QG + LK+ FQ V
Sbjct: 752 MMNTSGMGFRDHAGSMDLCRAALEFSFNVLKTGGHFVCKFYQGAEDKALEKQLKELFQTV 811
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
KP +SR+ES E + + ++
Sbjct: 812 HREKPESSRSESKEAYFIGLRRKQ 835
>gi|240274199|gb|EER37717.1| cell division cycle protein [Ajellomyces capsulatus H143]
Length = 355
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 4 PPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
P G S R + ++ SS+ W R D Y + A ++G ++R+A+KLLQIN++++
Sbjct: 33 PSGKSLGRKPRELIEISKRYSSSKRWQARQAKDKYSREAGVKGLKSRAAFKLLQINDRYK 92
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
I + + IVDLG +PGSWSQVA +T N RVV +DI+ +P GV + +FL L
Sbjct: 93 IFKPGQSIVDLGYAPGSWSQVAVDLTRPN---GRVVGVDIIPAQPPKGVSTIQGNFLSLQ 149
Query: 124 SWEFIRQAIGGNPD 137
++R+ +
Sbjct: 150 IQAYVREFLRNPNR 163
Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH +M LC AA F+ +L GG F+ K +QG + LK+ FQ V
Sbjct: 253 MMNTSGMSFRDHAGSMDLCRAALEFSFNVLKTGGHFVCKFYQGAEDKALEKQLKELFQTV 312
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
KP +SR+ES E + + ++
Sbjct: 313 HREKPESSRSESKEAYFIGLRRKQ 336
>gi|255954837|ref|XP_002568171.1| Pc21g11390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589882|emb|CAP96036.1| Pc21g11390 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 278
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 63/262 (24%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR----- 69
++V ++ SS+ W R D + + A ++G ++R+A+KLLQI+EK++I + +
Sbjct: 16 KQVTVQARHASSKRWQARQQKDQFTREAAVQGLKSRAAFKLLQIDEKYRIFKGGQTVVDL 75
Query: 70 -------------------RIVDLGSSPGSWSQVAARITGS---------------NANN 95
R++ + P + + I G+ N +
Sbjct: 76 GYAPGSWSQVAASRTQPHGRVLGVDIIPAQPPKGVSTIQGNFLAPEIQTYIRDFLRNPDR 135
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWE---FIRQAIGGNPDLVLSDM--------- 143
R LD I ++ ++ + + + D+VLSDM
Sbjct: 136 GRPRQSGFLDDSSISPLEPNSDTERTTEAEKGDMRGDKILERTVDVVLSDMSAPWYQTSG 195
Query: 144 ------------AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
T G DH +M LC AA F+ ++L GG F+ K +QG +
Sbjct: 196 FWKRSLSAPYNRMMNTSGVSFRDHAGSMDLCHAALRFSSDVLKAGGHFVCKFYQGAEDKE 255
Query: 192 ILCLLKKHFQKVIHVKPVASRA 213
+ LK+ F++V +KP +SR+
Sbjct: 256 LEQQLKELFKRVHRLKPESSRS 277
>gi|58264212|ref|XP_569262.1| cell division protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57223912|gb|AAW41955.1| cell division protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 237
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 77/221 (34%), Positives = 110/221 (49%), Gaps = 34/221 (15%)
Query: 27 RDWLNRHINDPYVQRA-------QLEGWRARSAYKLLQINEKHQIL-QSNRRIVDLGSSP 78
WL R DPYV++ +R+RS++KL+ + + H IL + + +VDLG++P
Sbjct: 15 NRWLTRQSRDPYVRQRTGTSSSPSQPSYRSRSSFKLVSLAKSHPILSRETKSVVDLGAAP 74
Query: 79 GSWSQVAARITGSNANNT---RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI--- 132
G WSQVAA + G + T RV AIDIL M+PI V+ + DFL E ++ +
Sbjct: 75 GGWSQVAAHLLGVDKKPTSKPRVWAIDILPMDPIPAVQTLQGDFLSSSVRETLQSLVGTP 134
Query: 133 --GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN---------------- 174
GG D VLSDM P G R D ++ LC AAT FA +L
Sbjct: 135 ESGGGVDTVLSDMMAPMTGVRTRDVGLSLELCAAATVFARGVLKQASKEDEVKVVKGKKV 194
Query: 175 -IGGDFLVKTFQGGTTNDILCL-LKKHFQKVIHVKPVASRA 213
GG+ ++K F ++ L L + F KV+ KP SR+
Sbjct: 195 WPGGNLVMKFFAHPDLDEFRKLELDRWFGKVVVEKPKESRS 235
>gi|156043163|ref|XP_001588138.1| hypothetical protein SS1G_10584 [Sclerotinia sclerotiorum 1980]
gi|154694972|gb|EDN94710.1| hypothetical protein SS1G_10584 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 281
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 58/251 (23%), Positives = 89/251 (35%), Gaps = 53/251 (21%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
W R D + + A+++G ++R+A+KLL++ + + RI+ + P + +
Sbjct: 17 TRWKTRQGRDSFSRDAKVQGLKSRAAFKLLEVAVERT--KPGGRILGIDIIPAQPPKGVS 74
Query: 87 RITG---------------SNANNTRVVAIDI---------------LDMEPILGVKFFK 116
I G S+ + R L+
Sbjct: 75 TIQGNFLSTGVQESVKQFLSDPDRGRPRKSLFADDAEDIEPEPSYLELERHMDDNNATAG 134
Query: 117 FDFLDLDSWEFIRQAIGGNPDLVLSDMA---------------------YPTIGHRKIDH 155
Q G D+VLSDM T G + DH
Sbjct: 135 DHVGKKRGRAPEEQDEGKIVDVVLSDMCEPWKQTAGFWKRSLSDPYFRMMNTTGIKFSDH 194
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES 215
+M LC AA FA + L GG F+ K +QG + LKK F V KP +SR+ES
Sbjct: 195 AGSMDLCAAALRFAFDTLKPGGHFVCKFYQGSEDKQLELQLKKLFSAVHREKPESSRSES 254
Query: 216 VEMFLLAKGFR 226
E F +A +
Sbjct: 255 KEAFFVALRRK 265
>gi|46136703|ref|XP_390043.1| hypothetical protein FG09867.1 [Gibberella zeae PH-1]
Length = 301
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 100/243 (41%), Gaps = 63/243 (25%)
Query: 23 QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS-NRRIVDLGSSPGSW 81
S W R D Y + A+++G ++R+A+KLL+++ K+++ + + +VDLG +PGSW
Sbjct: 31 SSSGSRWKQRQGRDSYARGAKVQGLKSRAAFKLLEMDSKYKLFKGSGQTVVDLGYAPGSW 90
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE--------------- 126
SQVA T + RV+ ID++ +P GV F+ DFL D E
Sbjct: 91 SQVAVEKTKP---HGRVIGIDLIPAQPPRGVATFQGDFLSPDVQEMVKNFILESHRRPPP 147
Query: 127 -----------------------FIRQAIGGNPDLVLSDMA------------------- 144
+ ++VLSDM+
Sbjct: 148 LQDEGDPENSTPDEAAALDRPSYLDMERHAAQDEVVLSDMSEPWDQTTGFNVNTLSNPYH 207
Query: 145 --YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
T G+ DH +M LC AA FA + L GG F+ K +QG D L+ F K
Sbjct: 208 RLMNTSGNAFRDHAGSMDLCAAALQFASDTLRSGGHFVCKFYQGSEDRDFEKKLRTLFTK 267
Query: 203 VIH 205
Sbjct: 268 NYI 270
>gi|225557686|gb|EEH05971.1| cell division cycle protein [Ajellomyces capsulatus G186AR]
Length = 337
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 4 PPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
P G S R + ++ SS+ W R D Y + A ++G ++R+A+KLLQIN++++
Sbjct: 15 PSGKSLGRKPRELIEISKRYSSSKRWQARQAKDKYSREAGVKGLKSRAAFKLLQINDRYK 74
Query: 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
I + + +VDLG +PGSWSQVA +T N RVV +DI+ +P GV + +FL L
Sbjct: 75 IFKPGQSVVDLGYAPGSWSQVAVDLTQPN---GRVVGVDIIPAQPPKGVSTIQGNFLSLQ 131
Query: 124 SWEFIRQAIGGNPD 137
++R+ +
Sbjct: 132 IQAYVREFLRNPNR 145
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH +M LC AA F+ +L GG F+ K +QG + LK+ FQ V
Sbjct: 235 MMNTSGMSFRDHAGSMDLCRAALEFSFNVLKTGGHFVCKFYQGAEDKALEKQLKELFQTV 294
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
KP +SR+ES E + + ++
Sbjct: 295 HREKPESSRSESKEAYFIGLRRKQ 318
>gi|323509097|dbj|BAJ77441.1| cgd4_1580 [Cryptosporidium parvum]
Length = 491
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGH 150
+++++ +D++ ++ I GV FK D + I + G P D+VL D A
Sbjct: 1 MGVSSKIIGVDLVAIKGIPGVTTFKCDITTERCRKLIFDELNGIPVDVVLHDGAPNVGTS 60
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D L + A E+L G F+ K F+ N +L +L + F V KP +
Sbjct: 61 WDKDAYIQNELVLHSAELACEILRPNGIFVTKVFRSTDYNSVLWVLSQLFNTVKATKPQS 120
Query: 211 SRAESVEMFLLAKGFR 226
SR S E+FL+ G++
Sbjct: 121 SRNVSAEIFLVCLGYK 136
>gi|225710072|gb|ACO10882.1| ribosomal RNA methyltransferase CG11447 [Caligus rogercresseyi]
Length = 201
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
S W+ R D YV++A+ EG+RARSAYKLL++++K +IL+ N +++ G +PG+W+QV
Sbjct: 49 SSSWIRRQAKDIYVKKARSEGYRARSAYKLLEMDDKLKILRPNMNVMECGGAPGAWTQVL 108
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA--IGGNPDLVLSDM 143
S T + + + DF + + I DLVLSDM
Sbjct: 109 TERVSSG---TIISCDLLDYEPVGRAIILPNSDFTSPSTQDTILSHLGKSSGFDLVLSDM 165
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
A G +++H + ++L AT FAL F
Sbjct: 166 APNASGMAELNHGQILNLSYEATKFALRHSKPEAAF 201
>gi|50554505|ref|XP_504661.1| YALI0E31933p [Yarrowia lipolytica]
gi|49650530|emb|CAG80265.1| YALI0E31933p [Yarrowia lipolytica]
Length = 245
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 16 KVKNRSCQGSSR-DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
++ R + +R W R + D +V A+ +G+R+R+AYKL +++ ++ + +VDL
Sbjct: 16 RIFVRGKKHDARSRWEMRQMKDKHVAMAKADGFRSRAAYKLQELDSMFRLFKPGMTVVDL 75
Query: 75 GSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
G +PG+WSQVAA+ RV+ +DIL P GV + +FL ++ ++
Sbjct: 76 GFAPGAWSQVAAQRVRPG---GRVIGVDILPCIPPPGVSSIQGNFLSKETQNELK 127
>gi|124487850|gb|ABN12008.1| Ftsj homolog 1-like protein [Maconellicoccus hirsutus]
Length = 206
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAY 145
R+ + + ++VA+D+ M P+ GV + D +L + + I +LV+ D A
Sbjct: 6 RLRKNTSVEPKIVAVDLQPMAPVPGVIQIQGDITELSTVKKILSYFENELIELVVFDGAP 65
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
G +D L AA +L GG F+ K F+G + L F+ VI
Sbjct: 66 DVTGIHDLDEFVQGQLLLAAVNITTFLLKPGGSFIGKIFRGSDNALLKSQLLLFFKDVII 125
Query: 206 VKPVASRAESVEMFLLAKGF 225
KP +SR S+E F++ +GF
Sbjct: 126 TKPRSSRNSSMESFVVCRGF 145
>gi|90085359|dbj|BAE91420.1| unnamed protein product [Macaca fascicularis]
Length = 198
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 68 NRRIVDLGSSPGSWSQVAARITG-----SNANNTRVVAIDILDMEPILGVKFFKFDFLDL 122
R++D G++PG+WSQVA + ++ V+ +D+L + P+ G F +
Sbjct: 25 KNRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPIGFVLGVDLLHIFPLEGATFLCPADVTD 84
Query: 123 D--SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
S + GG D++LSDMA G R +DH R +SLC ++L G FL
Sbjct: 85 PRTSQRILEVLPGGRADVILSDMAPNATGFRDLDHDRLISLCLTLLSMTPDILQPRGTFL 144
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
KT+ G ++ + L + FQ V +KP ASR ES E++ LA ++
Sbjct: 145 CKTWAGSQSHRLQRRLTEEFQNVRIIKPEASRKESSEVYFLATQYQ 190
>gi|237832339|ref|XP_002365467.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii ME49]
gi|211963131|gb|EEA98326.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii ME49]
Length = 394
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHL 156
+VA+D+ +M PI GV + D + + I P DLV+ D A G ID
Sbjct: 184 IVAVDLQEMAPIPGVHALQADITHESTVKAILDFFAQQPADLVVCDGAPDVTGMHDIDEF 243
Query: 157 RTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESV 216
L AA A ++L GG F+ K F+G + LK F +V KP ASR S+
Sbjct: 244 IQAQLLFAALRVACKVLKPGGVFVCKAFRGEQIPLVYVQLKTLFAEVRCCKPAASRNSSI 303
Query: 217 EMFLLAKGF 225
E FL+ KGF
Sbjct: 304 EAFLVCKGF 312
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS 67
L++ D Y +RA+ EG+RARSAYKLLQ++++ L
Sbjct: 4 LSKDRRDIYYRRAKEEGYRARSAYKLLQLDDELHFLSP 41
>gi|255075125|ref|XP_002501237.1| predicted protein [Micromonas sp. RCC299]
gi|226516501|gb|ACO62495.1| predicted protein [Micromonas sp. RCC299]
Length = 238
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/236 (23%), Positives = 89/236 (37%), Gaps = 45/236 (19%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI-- 88
+R D + + A+ G+ ARSA KL +I ++ +++ ++DLG PG+W+QVA+
Sbjct: 3 SRKTADFFAREAKKLGYAARSALKLKEIQDRFGVMRPGDAVLDLGCHPGAWTQVASERGA 62
Query: 89 ---TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-------QAIGGNPDL 138
G + TR A+ + LD + + +
Sbjct: 63 GSVVGVDLTTTRSDALGPRVDPRRTTLTVADVFDLDPPALRALCGSGGASPASRSRPFAA 122
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEA-------------------------------ATF 167
VLSDMA T G D + L E
Sbjct: 123 VLSDMAPSTSGDGVKDAALSYELAEQAVRLALGARALAVLDGDDDDDDREGDRDGDGHLE 182
Query: 168 FALEMLNIGGDFLVKTFQGG--TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
+L GG +VK +G +D+ + K F+ V +P A+R ES E+FL+
Sbjct: 183 HDPGVLRKGGSLVVKLLEGPGGGRDDLQRVCKPQFESVKWFRPRATRRESREVFLV 238
>gi|71896315|ref|NP_001026096.1| putative rRNA methyltransferase 3 [Gallus gallus]
gi|53130786|emb|CAG31722.1| hypothetical protein RCJMB04_10b6 [Gallus gallus]
Length = 767
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAIGGNPDLVLSDMAYPTIGH 150
++ V+ +D++ ++PI V + D + ++ D+VL+D A
Sbjct: 1 MPVSSLVIGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELQTWKVDVVLNDGAPNVGAS 60
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
D +L A A E L GG F+ K F+ +L + ++ F KV KP A
Sbjct: 61 WVHDAYSQANLTLMALKLACEFLCKGGWFITKVFRSRDYQPLLWIFQQFFHKVQATKPQA 120
Query: 211 SRAESVEMFLLAKGFR 226
SR ES E+F++ +G++
Sbjct: 121 SRNESAEIFVVCQGYQ 136
>gi|254583025|ref|XP_002499244.1| ZYRO0E07370p [Zygosaccharomyces rouxii]
gi|238942818|emb|CAR30989.1| ZYRO0E07370p [Zygosaccharomyces rouxii]
Length = 311
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ----SNRRIVDLGSS 77
S WL+R ND Y + A+++G R+R+A+KL+++++K + Q ++R++DLG +
Sbjct: 24 RFNSQGRWLDRQSNDHYTKEAKVQGLRSRAAFKLMELDDKFHLFQGDKHKHQRVLDLGFA 83
Query: 78 PGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPD 137
PG+WSQVA R G N V+ +DIL EP GV + + L + E IR +
Sbjct: 84 PGAWSQVAQRRIGPNGM---VLGVDILPCEPPKGVHSIQANILSRKTHELIRLYFSRHFQ 140
Query: 138 LVLSDMAYPTIGHRKIDHLRT 158
L SD + G+ +
Sbjct: 141 LYKSDHLHEHHGYFQHRLEEQ 161
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH +++ L +AA A+++L G+F+ K + G L+K FQ+V
Sbjct: 218 MANTSGVAIRDHYQSIDLADAALVTAIDLLRPRGNFVCKLYTGKEDKLFEKRLRKVFQRV 277
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
KP +SR ES E++ + G +
Sbjct: 278 NRFKPASSRGESKELYFIGLGKK 300
>gi|225717424|gb|ACO14558.1| ribosomal RNA methyltransferase CG11447 [Caligus clemensi]
Length = 171
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 26 SRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
S W+ R D YV++AQ EG+RARSAYKLL+INEK +IL+ +++ G +PGSW+QV
Sbjct: 48 SSSWIRRQSKDIYVKKAQSEGYRARSAYKLLEINEKFKILRPKMTVMECGGAPGSWTQVL 107
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIR-QAIGGNPDLVLSDM 143
+ S V++ D+LD +P+ DF + + I DLVLSDM
Sbjct: 108 TQKVHS----GEVISCDLLDYDPVDHAIILPQSDFTLPQTQDIILGHLKADGFDLVLSDM 163
Query: 144 AYP 146
A
Sbjct: 164 APK 166
>gi|240275390|gb|EER38904.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
capsulatus H143]
Length = 779
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 74 LGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-I 132
+ SW QVAA S + ++ +D+ ++PI V F+ D IRQ
Sbjct: 1 MAIQKKSWCQVAAECMPS---QSIIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLK 57
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D VL D A D L + A E L GG F+ K F+ N +
Sbjct: 58 SWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPL 117
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + K+ F V KP +SR S E+F++ +GF+
Sbjct: 118 LWVFKQLFNTVEATKPPSSRNVSAEIFVVCQGFK 151
>gi|145638914|ref|ZP_01794522.1| cell division protein [Haemophilus influenzae PittII]
gi|145271886|gb|EDK11795.1| cell division protein [Haemophilus influenzae PittII]
Length = 123
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Query: 106 MEPILGVKFFKFDFLDLDSWEFIRQAI-GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
M+PI+GV F + DF D + + + D+V+SDMA G +D R M L E
Sbjct: 1 MDPIVGVDFLQGDFRDENVLNALLARVGEDKVDVVMSDMAPNFSGMPSVDIPRAMYLVEL 60
Query: 165 ATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
A ++L G F+VK FQG ++ L ++ F V KP ASR S E++++A G
Sbjct: 61 ALDMCKQVLANKGSFVVKVFQGEGFDEYLREIRSLFNVVKVRKPEASRGRSREVYIVATG 120
Query: 225 FR 226
++
Sbjct: 121 YK 122
>gi|225561788|gb|EEH10068.1| AdoMet-dependent rRNA methyltransferase spb1 [Ajellomyces
capsulatus G186AR]
Length = 779
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 74 LGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-I 132
+ SW QVAA S + ++ +D+ ++PI V F+ D IRQ
Sbjct: 1 MAIQKKSWCQVAAECMPS---QSLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLK 57
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D VL D A D L + A E L GG F+ K F+ N +
Sbjct: 58 SWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPL 117
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + K+ F V KP +SR S E+F++ +GF+
Sbjct: 118 LWVFKQLFNTVEATKPPSSRNVSAEIFVVCQGFK 151
>gi|113195465|ref|YP_717602.1| Se89-like protein [Clanis bilineata nucleopolyhedrosis virus]
gi|94959006|gb|ABF47406.1| Se89-like protein [Clanis bilineata nucleopolyhedrosis virus]
Length = 280
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 7/183 (3%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R R +KL +I+++ + Q+ +DL PG +++ +
Sbjct: 48 RNRCYHKLREIDQQFNVCQNVNLFLDLCGGPGQFAKYVIDNNPGCKGFGTTLRNSCDYQY 107
Query: 108 PILGVKFFKFDFLDLDSWE-----FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
K + +E I GG DLV++D A G + L
Sbjct: 108 KHEDFKKIYGKHNSGNIFEESLRYEINMWCGGLCDLVMADGAVDVSGRENEQEQIMLPLL 167
Query: 163 EAATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFL 220
+ LE + GG ++K F T +L HF + KP +SRA + E +L
Sbjct: 168 KREIEICLENVRPGGACVLKIFDTYQEDTVALLEYFVSHFSEHTVFKPKSSRAANSEKYL 227
Query: 221 LAK 223
+ +
Sbjct: 228 VCQ 230
>gi|68171915|ref|ZP_00545234.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Ehrlichia chaffeensis
str. Sapulpa]
gi|67998660|gb|EAM85393.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Ehrlichia chaffeensis
str. Sapulpa]
Length = 131
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 106 MEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAA 165
M+ I V F + D ++ + D++LSDMA G++++DH ++LCE +
Sbjct: 1 MDAIPNVIFIQCDIINDIEL-LSDKFHNKKFDVILSDMAPKACGNKQVDHANIINLCEIS 59
Query: 166 TFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ G F+ K QG + +K +FQ V + KP ASR +S EM+L+ GF
Sbjct: 60 LDIVVRFTRENGVFITKILQGEYEKEFYQSMKTYFQSVKYFKPKASRKDSSEMYLVGLGF 119
Query: 226 RK 227
+K
Sbjct: 120 KK 121
>gi|323304989|gb|EGA58743.1| Mrm2p [Saccharomyces cerevisiae FostersB]
Length = 320
Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 16 KVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR---RIV 72
++ R S WLNR + DPY + A+++ R+R+A+KL+QI++K+++ NR RI+
Sbjct: 18 RIHVRYNSNSQNRWLNRQLKDPYTKEAKVQNLRSRAAFKLMQIDDKYRLFSKNRTDQRIL 77
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG +PG+WSQVA + + N + ++ +DIL EP GV + + L + + IR
Sbjct: 78 DLGYAPGAWSQVARQRSXPN---SMILGVDILPCEPPHGVNSIQANILAKRTHDLIRLFF 134
Query: 133 GGNPDLVLSDMAYP 146
+ L D +
Sbjct: 135 SKHFQLNRHDDLHK 148
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 63/177 (35%), Gaps = 6/177 (3%)
Query: 54 KLLQINEKHQILQSN---RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPIL 110
K Q+N + + + + +++ + +++ I S+ L
Sbjct: 136 KHFQLNRHDDLHKDHGYFQNMLEEELTHVKDTELYREIFTSDDIYETPNTNSTLIEREKF 195
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
V D + N T G DH +++ LC+AA A+
Sbjct: 196 PVDVIISDMYEPWPQTTGFWNNITNQAYF---RMANTSGVSIRDHYQSIDLCDAALVTAI 252
Query: 171 EMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++L G F+ K + G N ++ F V KP ASR ES E + + ++
Sbjct: 253 DLLRPLGSFVCKLYTGEEENLFKKRMQAVFTNVHKFKPDASRDESKETYYIGLKKKR 309
>gi|151943675|gb|EDN61985.1| 2'O-ribose methyltransferase [Saccharomyces cerevisiae YJM789]
Length = 320
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 16 KVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR---RIV 72
++ R S WLNR + DPY + A+++ R+R+A+KL+QI++K+++ NR RI+
Sbjct: 18 RIHVRYNSNSQNRWLNRQLKDPYTKEAKVQNLRSRAAFKLMQIDDKYRLFSKNRTDQRIL 77
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG +PG+WSQVA + + N + ++ +DIL EP GV + + L + + IR
Sbjct: 78 DLGYAPGAWSQVARQRSSPN---SMILGVDILPCEPPHGVNSIQANILAKRTHDLIRLFF 134
Query: 133 GGNPDLVLSDMAYP 146
+ L D +
Sbjct: 135 SKHFQLNRHDDLHK 148
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 63/177 (35%), Gaps = 6/177 (3%)
Query: 54 KLLQINEKHQILQSN---RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPIL 110
K Q+N + + + + +++ + +++ I S+ L
Sbjct: 136 KHFQLNRHDDLHKDHGYFQNMLEEELTHVKDTELYREIFTSDDIYETPNTNSTLIEREKF 195
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
V D + N T G DH +++ LC+AA A+
Sbjct: 196 PVDVIISDMYEPWPQTTGFWNNITNQAYF---RMANTSGVSIRDHYQSIDLCDAALVTAI 252
Query: 171 EMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++L G F+ K + G N ++ F V KP ASR ES E + + ++
Sbjct: 253 DLLRPLGSFVCKLYTGEEENLFKKRMQAVFTNVHKFKPDASRDESKETYYIGLKKKR 309
>gi|6321302|ref|NP_011379.1| Mrm2p [Saccharomyces cerevisiae S288c]
gi|1723920|sp|P53123|MRM2_YEAST RecName: Full=Ribosomal RNA methyltransferase MRM2, mitochondrial;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase;
Flags: Precursor
gi|1246842|emb|CAA63360.1| G2830 [Saccharomyces cerevisiae]
gi|1322708|emb|CAA96847.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270890|gb|AAS56826.1| YGL136C [Saccharomyces cerevisiae]
gi|190407085|gb|EDV10352.1| 2'O-ribose methyltransferase [Saccharomyces cerevisiae RM11-1a]
gi|256272222|gb|EEU07213.1| Mrm2p [Saccharomyces cerevisiae JAY291]
gi|259146373|emb|CAY79630.1| Mrm2p [Saccharomyces cerevisiae EC1118]
gi|285812074|tpg|DAA07974.1| TPA: Mrm2p [Saccharomyces cerevisiae S288c]
gi|323309163|gb|EGA62390.1| Mrm2p [Saccharomyces cerevisiae FostersO]
gi|323333646|gb|EGA75039.1| Mrm2p [Saccharomyces cerevisiae AWRI796]
gi|323337562|gb|EGA78807.1| Mrm2p [Saccharomyces cerevisiae Vin13]
gi|323348708|gb|EGA82950.1| Mrm2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355077|gb|EGA86907.1| Mrm2p [Saccharomyces cerevisiae VL3]
Length = 320
Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 16 KVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR---RIV 72
++ R S WLNR + DPY + A+++ R+R+A+KL+QI++K+++ NR RI+
Sbjct: 18 RIHVRYNSNSQNRWLNRQLKDPYTKEAKVQNLRSRAAFKLMQIDDKYRLFSKNRTDQRIL 77
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG +PG+WSQVA + + N + ++ +DIL EP GV + + L + + IR
Sbjct: 78 DLGYAPGAWSQVARQRSSPN---SMILGVDILPCEPPHGVNSIQANILAKRTHDLIRLFF 134
Query: 133 GGNPDLVLSDMAYP 146
+ L D +
Sbjct: 135 SKHFQLNRHDDLHK 148
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 63/177 (35%), Gaps = 6/177 (3%)
Query: 54 KLLQINEKHQILQSN---RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPIL 110
K Q+N + + + + +++ + +++ I S+ L
Sbjct: 136 KHFQLNRHDDLHKDHGYFQNMLEEELTHVKDTELYREIFTSDDIYETPNTNSTLIEREKF 195
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
V D + N T G DH +++ LC+AA A+
Sbjct: 196 PVDVIISDMYEPWPQTTGFWNNITNQAYF---RMANTSGVSIRDHYQSIDLCDAALVTAI 252
Query: 171 EMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++L G F+ K + G N ++ F V KP ASR ES E + + ++
Sbjct: 253 DLLRPLGSFVCKLYTGEEENLFKKRMQAVFTNVHKFKPDASRDESKETYYIGLKKKR 309
>gi|325091232|gb|EGC44542.1| AdoMet-dependent rRNA methyltransferase SPB1 [Ajellomyces
capsulatus H88]
Length = 779
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 74 LGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-I 132
+ SW QVAA S + ++ +D+ ++PI V F+ D IRQ
Sbjct: 1 MAIQKKSWCQVAAECMPS---QSLIIGVDLAPIKPIPKVITFQSDITTDKCRATIRQHLK 57
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D VL D A D L + A E L GG F+ K F+ N +
Sbjct: 58 SWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLVPGGTFVTKVFRSKDYNPL 117
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + K+ F V KP +SR S E+F++ +GF+
Sbjct: 118 LWVFKQLFNTVEATKPPSSRNVSAEIFVVCQGFK 151
>gi|226294107|gb|EEH49527.1| AdoMet-dependent rRNA methyltransferase spb1 [Paracoccidioides
brasiliensis Pb18]
Length = 776
Score = 99.1 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
Query: 74 LGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE-FIRQAI 132
+ SW QVAA S + +V +D+ ++PI V F+ D +
Sbjct: 1 MAIQKKSWCQVAAECMPS---QSLIVGVDLAPIKPIPKVITFQSDITTDKCRATIRQHFK 57
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D VL D A D L + A E L GG F+ K F+ N +
Sbjct: 58 SWKADTVLHDGAPNVGVAWVQDAFSQAELVLQSLKLATEFLAPGGTFVTKVFRSKDYNPL 117
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + K+ F V KP +SR S E+F++ GF+
Sbjct: 118 LWVFKQLFTSVKATKPPSSRNVSAEIFVVCLGFK 151
>gi|207345420|gb|EDZ72247.1| YGL136Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 182
Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 16 KVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR---RIV 72
++ R S WLNR + DPY + A+++ R+R+A+KL+QI++K+++ NR RI+
Sbjct: 18 RIHVRYNSNSQNRWLNRQLKDPYTKEAKVQNLRSRAAFKLMQIDDKYRLFSKNRTDQRIL 77
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
DLG +PG+WSQVA + + N + ++ +DIL EP GV + + L + + IR
Sbjct: 78 DLGYAPGAWSQVARQRSSPN---SMILGVDILPCEPPHGVNSIQANILAKRTHDLIRLFF 134
Query: 133 GGNPDLVLSDMAYP 146
+ L D +
Sbjct: 135 SKHFQLNRHDDLHK 148
>gi|148702025|gb|EDL33972.1| Ftsj homolog 1 (E. coli), isoform CRA_a [Mus musculus]
Length = 131
Score = 98.7 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++E+ Q+ + +R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYP 146
+ +VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A
Sbjct: 65 -GQGSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPD 120
>gi|149028399|gb|EDL83784.1| rCG22889, isoform CRA_a [Rattus norvegicus]
Length = 131
Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/117 (40%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ +GWRARSA+KLLQ++E+ Q+ + +R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKEKGWRARSAFKLLQLDEEFQLFKGVKRAVDLCAAPGSWSQVLSQKVG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYP 146
++ +VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A
Sbjct: 65 -GQSSGQVVAVDLQAMAPLPGVIQIQGDITQLSTAKEIIQHFEGCPADLVVCDGAPD 120
>gi|134057568|emb|CAK37978.1| unnamed protein product [Aspergillus niger]
Length = 230
Score = 98.7 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS+ W R + D + + A ++G ++R+A+KLLQI+EK+ I +S + +VDLG +PGS
Sbjct: 25 KRFSSSKRWQARQLKDRFTREAAVQGLKSRAAFKLLQIDEKYHIFESGQTVVDLGYAPGS 84
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPD 137
WSQVA T + RV+ +DI+ +P GV + +FLD + ++R+ +
Sbjct: 85 WSQVAVARTQP---HGRVLGVDIIPAQPPKGVSTIQGNFLDPNIQAYVREFVRDANR 138
>gi|1749628|dbj|BAA13871.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 173
Score = 98.3 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 16/175 (9%)
Query: 65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDS 124
+ ++D+G +PGSWSQVA ++ G+ +V+ IDI + P GV D D ++
Sbjct: 1 INKEDVVIDVGFAPGSWSQVAKKLVGNK---GKVIGIDIQHIAPPEGVLPIYGDIRDPNT 57
Query: 125 WEFIRQA-------------IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
+ +A D V+SDM + G R DH +M LC +A AL
Sbjct: 58 LTKLFEALRLLHEPNTNDSIDCRVVDAVISDMLHKATGIRIRDHALSMELCASALHVALT 117
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L G F+ K + G D+ LLK HF+ V +KP AS ES E + + +
Sbjct: 118 FLKSNGSFICKFYMGDEDADLQNLLKSHFRFVQVMKPKASLKESREAYFVCLERK 172
>gi|254670625|emb|CBA06622.1| cell division protein [Neisseria meningitidis alpha153]
Length = 127
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTM 159
+DIL ME I GV F + DF + D + P DLV+ DMA G+ D +R+
Sbjct: 1 MDILPMEAIGGVSFIQGDFRENDVLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQVRSF 60
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
LCE A FA + L GG FLVK FQG + + +++ F V KP ASR S E++
Sbjct: 61 YLCELALDFASQHLKTGGSFLVKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIY 120
Query: 220 LLAKGFR 226
LL K R
Sbjct: 121 LLGKNKR 127
>gi|125860210|ref|YP_001036380.1| putative methyltransferase [Spodoptera frugiperda MNPV]
gi|120969355|gb|ABM45798.1| putative methyltransferase [Spodoptera frugiperda MNPV]
gi|167833769|gb|ACA02645.1| MET [Spodoptera frugiperda MNPV]
gi|319997423|gb|ADV91321.1| methyltransferase [Spodoptera frugiperda MNPV]
Length = 266
Score = 98.3 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 91/223 (40%), Gaps = 16/223 (7%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQL--EG---WRARSAYKLLQINEKHQILQSNRRI 71
+ + + ++ L H ++ +V+ A+ EG R R K+ I+EK+ + ++
Sbjct: 2 FRLKKQLDALKNRLGNH-DEHHVRLARQFIEGGVRIRNRCYLKIKDIDEKYNVCKNVETF 60
Query: 72 VDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEP-------ILGVKFFKFDFLDLDS 124
+DL PG +++ + + V + D + G F D D +
Sbjct: 61 LDLCGGPGQFAKYVFDVNNHECSGYGVTLRNHCDYTFDHVLFRKMYGC-FDTGDIFDANV 119
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
+ G DLV++D A+ G+ + L L L GG+ ++K F
Sbjct: 120 VFELMYFCRGKCDLVVADGAFDVKGNENNQESLSYPLIAKECMIILGALRTGGNCVLKIF 179
Query: 185 QG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+T +L HF + KP+ASRA + E +L+ KG
Sbjct: 180 DTFESSTISLLQEFISHFDEHYLYKPLASRAANAEKYLVCKGK 222
>gi|294947674|ref|XP_002785437.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
gi|239899348|gb|EER17233.1| ribosomal RNA methyltransferase, putative [Perkinsus marinus ATCC
50983]
Length = 224
Score = 97.9 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE 126
N+R+VDLG G WSQVA + T +N+ VV +D + M+ + F + D + + +
Sbjct: 35 KNQRVVDLGCYSGGWSQVALKRTRVGESNSMVVGVDKVRMDALQMHTFVQGDITEPSTID 94
Query: 127 FIRQA--IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
+++A ++LSDMA G R DHL L +L + G ++KTF
Sbjct: 95 AVKRALGENKKAHVLLSDMAPNVTGRRADDHLEITELNIKTIDVMESVLGLKGWLVMKTF 154
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G T + L+ F KV +P A+R ES E++L+A G+R
Sbjct: 155 YGPETQKLRTFLESRFYKVRACRPHATRPESREVYLIASGYR 196
>gi|295698487|ref|YP_003603142.1| ribosomal RNA large subunit methyltransferase J [Candidatus Riesia
pediculicola USDA]
gi|291157412|gb|ADD79857.1| ribosomal RNA large subunit methyltransferase J [Candidatus Riesia
pediculicola USDA]
Length = 161
Score = 97.9 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
R++DLGS PG WS +++I G + +++ DI M+PI V FF+ D D + +
Sbjct: 1 MRVIDLGSYPGGWSLYSSKIVGRLGH---IISCDIKPMDPIKNVHFFQGDVFDRSTITRL 57
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
+ ++LSDM G ID + L E ML G ++K F G
Sbjct: 58 SDNLKFPAHVILSDMCPNITGISIIDIPKCFLLTEKVIEICKFMLIPEGSCILKMFYGKN 117
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ ++ F V KP +S +S E++++AK F+
Sbjct: 118 FSNQYQKIRNIFSSVKIRKPHSSIKQSNEIYIIAKRFK 155
>gi|215401486|ref|YP_002332790.1| hypothetical protein SlnV2_gp092 [Spodoptera litura
nucleopolyhedrovirus II]
gi|209484027|gb|ACI47460.1| unknown [Spodoptera litura nucleopolyhedrovirus II]
Length = 294
Score = 97.9 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 69/185 (37%), Gaps = 7/185 (3%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R R K+ I+EK Q+ ++ +DL PG +++ + + D
Sbjct: 44 RNRCYLKMRDIDEKFQLCRNVDVFLDLCGGPGQFAKYIFDVNADCLGYGATLRNDCDYAF 103
Query: 108 PILGVK-----FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
+ F D D + + DLV++D A+ G + +L
Sbjct: 104 DHPNFRKMYGCFDTGDIFDANVLFELMYFCKNKCDLVVADGAFDVRGDENNQETLSFNLI 163
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFL 220
++ L GG+ ++K F T +L HF + KP SRA + E +L
Sbjct: 164 RKECSIIVDALRAGGNCVLKIFDTFERSTISLLEDFVSHFTEHTVYKPPHSRAANSEKYL 223
Query: 221 LAKGF 225
+ KG
Sbjct: 224 VCKGK 228
>gi|258567254|ref|XP_002584371.1| AdoMet-dependent rRNA methyltransferase spb-1 [Uncinocarpus reesii
1704]
gi|237905817|gb|EEP80218.1| AdoMet-dependent rRNA methyltransferase spb-1 [Uncinocarpus reesii
1704]
Length = 768
Score = 97.9 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 4/148 (2%)
Query: 80 SWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-IGGNPDL 138
SW QVAA ++ + +V +D+ ++PI V F+ D IRQ D
Sbjct: 18 SWCQVAAECMPTD---SLIVGVDLSPIKPIPRVITFQSDITTDKCRATIRQHLKTWKADT 74
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VL D A D L + A E L GG F+ K F+ N +L + K+
Sbjct: 75 VLHDGAPNVGTAWVQDAFSQAELVLQSLKLATEFLVPGGSFVTKVFRSKDYNPLLWVFKQ 134
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KP +SR S E+F++ +GF+
Sbjct: 135 LFTSVEATKPPSSRNVSAEIFVVCRGFK 162
>gi|302914138|ref|XP_003051077.1| hypothetical protein NECHADRAFT_41834 [Nectria haematococca mpVI
77-13-4]
gi|256732015|gb|EEU45364.1| hypothetical protein NECHADRAFT_41834 [Nectria haematococca mpVI
77-13-4]
Length = 309
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 88/251 (35%), Gaps = 60/251 (23%)
Query: 23 QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR------------- 69
S W R D Y + A+++G ++R+A+KLL+++ K+++ ++N
Sbjct: 28 SSSGSRWKQRQGRDAYARNAKVQGLKSRAAFKLLEMDAKYRLFKNNGQTVVDLGYAPGSW 87
Query: 70 ------------RIVDLGSSPGSWSQVAARITG--------------------------- 90
R++ + P Q A G
Sbjct: 88 SQVAVDRTRPHGRVIGIDLIPAQPPQGVATFQGDFLSPNVQGMVKNFILDTHKRPPPLQH 147
Query: 91 --SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM----- 143
+++ V +I I + + ++ + + ++ +
Sbjct: 148 EAETSDSDEVEVSEIDRPSYIDMERHASSESGSPEASDDMSAPWDQTSGFYVNSLSNPYN 207
Query: 144 -AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
T G+ DH +M LC AA FA + L GG F+ K +QG + LK F K
Sbjct: 208 RLMNTSGNAFRDHAGSMDLCAAALQFASDTLKSGGHFVCKFYQGPEDKEFEKKLKTLFVK 267
Query: 203 VIHVKPVASRA 213
V KP +SR
Sbjct: 268 VFREKPESSRK 278
>gi|297709883|ref|XP_002831647.1| PREDICTED: LOW QUALITY PROTEIN: putative ribosomal RNA
methyltransferase 1-like [Pongo abelii]
Length = 186
Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
++ D Y + A+ GWRARSA+KLLQ++++ Q+ Q R VDL ++PGSWSQV ++ G
Sbjct: 5 SKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIG 64
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIG 149
+ VVA+D+ M P+ GV + D L + + I Q G P DLV+ D A
Sbjct: 65 -GQGSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDAPT 123
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
I + + + + +
Sbjct: 124 QPPISPPYQEACTLKKKGQLAKEIRPQDCPISRV 157
>gi|255719518|ref|XP_002556039.1| KLTH0H03630p [Lachancea thermotolerans]
gi|238942005|emb|CAR30177.1| KLTH0H03630p [Lachancea thermotolerans]
Length = 310
Score = 97.1 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 13 LTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN--RR 70
L +V R + WL+R D + + A+++G R+R+A+KL+ +++K+ + + ++
Sbjct: 19 LRWRVAVRFNSSAKSRWLDRQKGDSFTREAKVQGLRSRAAFKLMHLDDKYHLFRKGSSQK 78
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
++DLG +PG+WSQVA TG N ++ +DIL P GV + + L + E IR
Sbjct: 79 VLDLGYAPGAWSQVALDRTGPN---GVILGVDILPCAPPRGVSAIQGNILSKKTHELIRL 135
Query: 131 AIGGNPDLVLSDMAYPTIGHRKI 153
+ L D + G+ +
Sbjct: 136 FFSKHFQLYQEDQLHKDNGYFQH 158
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 42/81 (51%)
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D T G DH +M LC+AA A++++ GG F+ K + G + LKK F+
Sbjct: 215 DRMANTTGVAIKDHYMSMDLCDAALVTAIDLMKPGGSFVCKLYTGKEDKLLESRLKKAFE 274
Query: 202 KVIHVKPVASRAESVEMFLLA 222
V KP ASR ES E++ +
Sbjct: 275 NVHRFKPSASRNESKELYFIG 295
>gi|225678023|gb|EEH16307.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 779
Score = 96.4 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ W R D Y + A ++G ++R+A+KLLQIN+KH+I + + +VDLG +PGSW
Sbjct: 499 RHSSSKRWQARQAKDRYSREAIVKGLKSRAAFKLLQINDKHKIFKLGQSVVDLGYAPGSW 558
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
SQVA +T N RVV +DI+ +P GV + +FL ++++ + +
Sbjct: 559 SQVAVELTQPN---GRVVGVDIIPAQPPKGVSTIQGNFLSPQVQAYVQEFLRNPNRGRVQ 615
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAA 165
+ + + + E+
Sbjct: 616 RLNHFENTDPDSQSITGYQIEESE 639
>gi|322701264|gb|EFY93014.1| cell division protein ftsj, putative [Metarhizium acridum CQMa 102]
Length = 257
Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/223 (21%), Positives = 82/223 (36%), Gaps = 44/223 (19%)
Query: 23 QGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWS 82
S+ W R D + + A+++G ++R+A+KLL+++ K+++ + + +VDL
Sbjct: 38 SSSNSRWKQRQGRDVFSREAKVQGLKSRAAFKLLEMDSKYRLFKPGQTVVDL-------- 89
Query: 83 QVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA----------- 131
VA T + RV+ ID++ +P GV F+ DFL +R+
Sbjct: 90 -VAQERTRP---HGRVIGIDLIPAQPPRGVATFQGDFLSPSVQRLVREFIARTGRPVEKV 145
Query: 132 ---------------------IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
GN D+ + R MS + L
Sbjct: 146 ERGDDGETMSYIDRERRASEEREGNGTSASVDVVLSDMSAPWNQSFRYMSNTLTNPYRRL 205
Query: 171 EMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
+ G + LK+ F KV KP +SR+
Sbjct: 206 MNTSGVAFRDHAGSMGSEDKKLEARLKRMFAKVFREKPESSRS 248
>gi|254167682|ref|ZP_04874533.1| ribosomal RNA large subunit methyltransferase J [Aciduliprofundum
boonei T469]
gi|197623491|gb|EDY36055.1| ribosomal RNA large subunit methyltransferase J [Aciduliprofundum
boonei T469]
Length = 155
Score = 96.0 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 78/155 (50%), Gaps = 5/155 (3%)
Query: 72 VDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
+DLG++PG WSQVA +I G V + + V++ + D ++ + I++
Sbjct: 1 MDLGAAPGGWSQVALKIVGREGRVIAVD----IKPVKLRDVEYIRGDVYSDETLKRIKER 56
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+VLSDM+ G DH R++ L E A F A +L G F+VK FQG N
Sbjct: 57 AEKV-DVVLSDMSPKISGISSWDHARSIDLAERALFIAENVLRERGHFVVKIFQGDMLNA 115
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + F V KP AS ES E++++ K F+
Sbjct: 116 YLKKCRDRFDMVKVHKPKASNRESPEIYVVCKRFK 150
>gi|254166970|ref|ZP_04873823.1| ribosomal RNA large subunit methyltransferase J [Aciduliprofundum
boonei T469]
gi|197623826|gb|EDY36388.1| ribosomal RNA large subunit methyltransferase J [Aciduliprofundum
boonei T469]
Length = 155
Score = 96.0 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 72 VDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
+DLG++PG WSQVA +I G V + + V++ + D ++ + I++
Sbjct: 1 MDLGAAPGGWSQVALKIVGREGRVIAVD----IKPVKLRDVEYIRGDVYSDETLKRIKER 56
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
D+VLSDM+ G DH R++ L E A F A +L G F+VK FQG N
Sbjct: 57 AEKV-DVVLSDMSPKISGISSWDHARSIDLAERALFIAENVLRERGHFVVKIFQGDMLNG 115
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L + F+ V KP AS ES E++++ K F+
Sbjct: 116 YLKKCRDRFEMVKVHKPKASNRESPEIYVVCKRFK 150
>gi|149235103|ref|XP_001523430.1| hypothetical protein LELG_05276 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452839|gb|EDK47095.1| hypothetical protein LELG_05276 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 300
Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 107/197 (54%), Gaps = 9/197 (4%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-QSNRRIVDLGSSP 78
R +R L + +DP+ +R + + +R+R+A+K+L+IN++ ++ ++ + IVDLG +P
Sbjct: 26 RFKSKQTRKHLAKVQDDPFNRR-KGDFYRSRAAFKILEINDRCRLFHKNCKNIVDLGFAP 84
Query: 79 GSWSQVAARITGS-NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG--- 134
G+W+QVA + +++ IDI + P G + + D L ++ E I++
Sbjct: 85 GAWTQVAVEKLHEQKIEDFKILGIDINEAVPYRGCHYIQGDLLKKETHEKIKEFFKSKDG 144
Query: 135 ---NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
DL++SDM GH DHL M LC AAT + + L GG+ ++K + G
Sbjct: 145 SPEQIDLIMSDMMVNCTGHEHYDHLGNMELCGAATILSFDTLKTGGNLVMKVWHGSEEKL 204
Query: 192 ILCLLKKHFQKVIHVKP 208
+ ++ F++++ +KP
Sbjct: 205 LDLRMRIMFERLVRMKP 221
>gi|298711156|emb|CBJ32381.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 405
Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAY 145
R+ + R+VA+D+ M PI GVK + D + + E I G +LV+ D A
Sbjct: 169 RVKDTEEEEVRIVAVDLQGMAPIEGVKQLQGDITSVKTAEAIIDHFRGGLAELVVCDGAP 228
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIH 205
G ID L AA +L+ GG F+ K F+G ++ + L+ F++V
Sbjct: 229 DVTGLHDIDEYLQAQLLLAALNITAHVLSPGGTFVAKIFRGRDSSLLYSQLRLLFERVTI 288
Query: 206 VKPVASRAESVEMFLLAK 223
KP +SR+ S+E F++ +
Sbjct: 289 AKPRSSRSSSIEAFVVCR 306
Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV-AARITG 90
+ D + ++A+ G+RARSA+KLLQ++E+ + + + VDL ++PGSWSQV A+++ G
Sbjct: 6 KDKRDMFYRKAKEVGFRARSAFKLLQLDEEFGLFEGVTKAVDLCAAPGSWSQVLASKLLG 65
Query: 91 SNANNTRVVAID 102
+ +
Sbjct: 66 DKRDTPAAAGCE 77
>gi|312222075|emb|CBY02015.1| hypothetical protein [Leptosphaeria maculans]
Length = 356
Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 11 RGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR 70
R + V + SS W +R D + + A+++G ++R+A+KLL++N+KH++ + +
Sbjct: 38 RSRSPAVSAQRASSSSTRWKSRQGKDFFAREARVQGLKSRAAFKLLELNKKHKLFKPGQT 97
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
+VDLG +PGSWSQVA T N RV+ IDI+ +P GV + +FL + E +R
Sbjct: 98 VVDLGYAPGSWSQVAVNCTDPN---GRVIGIDIIPAQPPRGVSTIQGNFLSAEIQEEVRA 154
Query: 131 AIGGN 135
+
Sbjct: 155 YVRDP 159
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 43/84 (51%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G+ DH +M LC AA FA + L GG FL K +QG + LK+ F +V
Sbjct: 264 MMNTSGNGFRDHAGSMDLCMAALTFAFDTLKTGGHFLCKYYQGAEEKALETKLKRLFAQV 323
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
KP +SR ES E + +A ++
Sbjct: 324 CREKPDSSRNESKEAYFVALRRKE 347
>gi|156848734|ref|XP_001647248.1| hypothetical protein Kpol_1002p37 [Vanderwaltozyma polyspora DSM
70294]
gi|156117933|gb|EDO19390.1| hypothetical protein Kpol_1002p37 [Vanderwaltozyma polyspora DSM
70294]
Length = 317
Score = 95.6 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/282 (20%), Positives = 94/282 (33%), Gaps = 71/282 (25%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSA---------YKLLQINEKHQILQS 67
++ R S WL R +DPY Q A+ + R+R+A +KL ++K +L
Sbjct: 26 IQLRYNSNSKSRWLQRQWSDPYTQEAKDQNLRSRAAFKLIEINNRFKLFDKHKKLNVLDL 85
Query: 68 NRR----------------------IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD 105
I+ G S A ++ + R+ +
Sbjct: 86 GFAPGAWSQVIRKSTSDDSLILGVDILPCDPPTGVSSIQANILSKRTHDLIRLFFNESFQ 145
Query: 106 MEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-------------------DLVLSDMA-- 144
+ + F D E + D+V+SDM
Sbjct: 146 LNREDNLHKDYGYFQDYLENELDSNFKEDSQTLMTDNDKPVNFSISKYPIDIVVSDMYVP 205
Query: 145 -------------------YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
T G DH +++ LC+AA A++++ G F+ K +
Sbjct: 206 WQVFNTHQNNITNIPNYRMANTSGLAVKDHAQSIDLCDAALVTAIDLVKPKGSFVCKLYS 265
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
G N LKK F K KP +SR+ES E + + R+
Sbjct: 266 GKEENLFEKRLKKVFHKAYRFKPKSSRSESKEFYFIGLNKRE 307
>gi|320586619|gb|EFW99289.1| cell division protein [Grosmannia clavigera kw1407]
Length = 341
Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
SS W +R D Y + A++ G + R+A+KLL+++ K+++ + + +VDLG +PGSWSQ
Sbjct: 65 SSSSRWTSRQEKDIYAREAKVRGLKGRAAFKLLEMDSKYRLFRPGQMVVDLGYAPGSWSQ 124
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
VA T RV+ ID++ +P GV + +FL +++
Sbjct: 125 VALERTKPT---GRVLGIDLIPAQPPRGVSTIQGNFLAPSVRALVKEY 169
Score = 83.7 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 49/90 (54%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
D+VLSDM T G DH +M LC AA FA + L GG F+ K +QGG + L
Sbjct: 243 DVVLSDMMMNTSGTPFRDHAGSMDLCAAALEFASDTLRPGGHFVCKFYQGGEDKALETRL 302
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F KV KP +SR+ES E F +A +
Sbjct: 303 LKMFAKVHREKPNSSRSESKESFFVALRRK 332
>gi|156097180|ref|XP_001614623.1| ribosomal RNA methyltransferase [Plasmodium vivax SaI-1]
gi|148803497|gb|EDL44896.1| ribosomal RNA methyltransferase, putative [Plasmodium vivax]
Length = 526
Score = 95.2 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 96/294 (32%), Gaps = 98/294 (33%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ----------------------S 67
L++ D Y ++A+ G+RARS++KL+QINEK I +
Sbjct: 4 LSKDRRDIYYRKAKENGYRARSSFKLIQINEKFGIFKLFDPQRCGEKEKDKIGSIYNENF 63
Query: 68 NRRIVDLGSSPGSWSQVAARIT-------------------------------------- 89
+VDL ++PGSWSQV I
Sbjct: 64 CYNVVDLCAAPGSWSQVLKNICLYNYYQMLHWESKNEGTPPNCVEHEKFLNDFSLYINFN 123
Query: 90 ------------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPD 137
+ +++A+D+ ++ + V+ + D + I + +
Sbjct: 124 DELEKRIESLAKNNFVKMPKIIAVDLQEIGNMKYVQIIQGDITKASTVHQILRCMRDGTS 183
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLN------------------IGGDF 179
+ + + + + + A +
Sbjct: 184 ADDTVLGSAQLDEQNSQRNNSPTYAHAVVSDGAPDITGMNDIDEFIQSQLILSSLKVCCS 243
Query: 180 LVKT--------FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++K F+G T ++ L K F++V KP +SR +S+E FL+ F
Sbjct: 244 VLKIGGNFISKIFRGEHTGLLILHLNKFFERVYVCKPQSSRNKSLESFLVCLNF 297
>gi|189201217|ref|XP_001936945.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187984044|gb|EDU49532.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 306
Score = 94.8 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL------------VLSDM 143
R+VAID+ M P+ GV + D + + +A+ + V+SD
Sbjct: 34 VRIVAIDLQPMSPLEGVTTMRADITHPSTIPLMLKALDPDTYDPNATTGSSPVDLVISDG 93
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
A G +D L AA AL +L GG F+ K F+G + + LK F++V
Sbjct: 94 APDVTGLHDLDIYVQSQLLWAALNLALCVLKPGGKFVAKIFRGKDVDLLFAQLKIVFERV 153
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP +SRA S+E F++ +GF
Sbjct: 154 RVAKPRSSRASSIEAFVVCEGF 175
>gi|9634310|ref|NP_037849.1| ORF89 [Spodoptera exigua MNPV]
gi|6960548|gb|AAF33618.1|AF169823_89 ORF89 [Spodoptera exigua MNPV]
Length = 299
Score = 94.8 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 76/201 (37%), Gaps = 15/201 (7%)
Query: 40 QRAQL-----EGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNAN 94
+RA+ + R R +K+ I++K Q+ ++ +DL PG +++
Sbjct: 29 RRARQTLERGQHVRNRCYFKMRDIDDKFQLCRNVNVFLDLCGGPGQFAKYIFDTNADCLG 88
Query: 95 NTRVVAIDILDMEPILGV--------KFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
+ + D + F + D + + DLV++D A+
Sbjct: 89 YGVTLRDNNNDCDYNFDHPNFRKMYGCFDTGNIFDANVLFELMYFCRNKCDLVVADGAFD 148
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKHFQKVI 204
G+ + +L ++ L GG+ ++K F T +L HF +
Sbjct: 149 VSGNENDQESLSYNLIRKECSIIVDALRAGGNCVLKIFDTFERSTISLLQDFVSHFNEFA 208
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP SRA + E +L+ KG
Sbjct: 209 IYKPAHSRAANSEKYLVCKGK 229
>gi|289615348|emb|CBI57934.1| unnamed protein product [Sordaria macrospora]
Length = 328
Score = 94.8 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-------------IRQAIGGNPDLVLS 141
++V+ID+ + P+ G+ + D + + Q DLV+S
Sbjct: 75 QVKIVSIDLQPISPLPGIITLRADITHPATVPLLLKALDPDFDPSTMNQQASHPVDLVIS 134
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G +D L AA AL +L GG F+ K F+G + + LK F+
Sbjct: 135 DGAPDVTGLHDLDIYVQSQLLFAALNLALCVLKPGGKFVAKIFRGRNVDLLYAQLKVFFE 194
Query: 202 KVIHVKPVASRAESVEMFLLAKGFR 226
KV KP +SRA SVE F++ F+
Sbjct: 195 KVYVAKPRSSRASSVEAFIVCINFQ 219
>gi|115380659|ref|ZP_01467590.1| ribosomal RNA large subunit methyltransferase J [Stigmatella
aurantiaca DW4/3-1]
gi|115362334|gb|EAU61638.1| ribosomal RNA large subunit methyltransferase J [Stigmatella
aurantiaca DW4/3-1]
Length = 165
Score = 94.4 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
++DLG++PG + Q+ A G + V + I V D L D +R
Sbjct: 1 MLDLGAAPGGFLQILADTVGLSGRVIGVDIVAIRPFPQ-KHVTTAVLDVLADDFDARLRA 59
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
G D V+SDMA T G + D R++ L A A+E G F+ K F GG
Sbjct: 60 LYEGPLDAVISDMAPKTSGIKATDEARSLRLAGKALEVAVERGRPGSSFVAKLFMGGDFE 119
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ + +V V+P A+R S+E++L+ +
Sbjct: 120 AFRDQVRASYDEVKVVRPEATRGASMEVYLVGLRLK 155
>gi|194378570|dbj|BAG63450.1| unnamed protein product [Homo sapiens]
Length = 145
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 55/77 (71%)
Query: 20 RSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPG 79
++ G+ WL RH+ DP+V+ A++E +R RSA+KLL++NE+HQIL+ R++D G++PG
Sbjct: 25 KNRTGAEHLWLTRHLRDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPG 84
Query: 80 SWSQVAARITGSNANNT 96
+WSQVA + + +
Sbjct: 85 AWSQVAVQKVNAAGTDG 101
>gi|148236585|ref|NP_001080816.1| FtsJ homolog 1 [Xenopus laevis]
gi|29124411|gb|AAH49003.1| Ftsj1-prov protein [Xenopus laevis]
Length = 130
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
SS+D D Y + A+ EGWRARSA+KLLQ++E++++ Q +R VDL ++PGSWSQV
Sbjct: 4 SSKD-----KRDIYYRLAKEEGWRARSAFKLLQLDEEYRLFQGVQRAVDLCAAPGSWSQV 58
Query: 85 AARITGSNANNT---RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVL 140
+R + ++VA+D+ M P+ GV + D + + I G P DLV+
Sbjct: 59 LSRKLRGGDEQSRGVKIVAVDLQAMAPLPGVIQIQGDITKVSTAHEIIGHFEGQPADLVV 118
Query: 141 SDMAYP 146
D A
Sbjct: 119 CDGAPD 124
>gi|270667884|ref|ZP_06222474.1| FtsJ-like methyltransferase [Haemophilus influenzae HK1212]
gi|270316776|gb|EFA28530.1| FtsJ-like methyltransferase [Haemophilus influenzae HK1212]
Length = 143
Score = 94.1 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 54/145 (37%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
+VDLG++PG WSQ G RV+A DIL+M PI+GV F + DF D + +
Sbjct: 1 MTVVDLGAAPGGWSQYVVSQIGGK---GRVIACDILEMAPIVGVDFLQGDFRDENVLNAL 57
Query: 129 RQAI-GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
+ D+V+SDMA G +D R M L E A ++L G F+VK FQG
Sbjct: 58 LARVGEDKVDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGE 117
Query: 188 TTNDILCLLKKHFQKVIHVKPVASR 212
++ L + F V KP ASR
Sbjct: 118 GFDEYLRETRSLFNVVKVRKPEASR 142
>gi|153827666|ref|ZP_01980333.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
MZO-2]
gi|149737860|gb|EDM52765.1| ribosomal RNA large subunit methyltransferase J [Vibrio cholerae
MZO-2]
Length = 93
Score = 93.7 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 52/92 (56%)
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D+V+SDMA G+ +D R M L E A ++L G F+VK FQG +D +
Sbjct: 1 MVDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVK 60
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ F+ V KP +SR+ S E+F++A G++
Sbjct: 61 AVRDLFKVVKIRKPDSSRSRSREVFIVATGYK 92
>gi|239611411|gb|EEQ88398.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces
dermatitidis ER-3]
Length = 405
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 23/155 (14%)
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-----------------------IRQ 130
N ++VAID+ M P+ G+ K D +
Sbjct: 129 KNVKIVAIDLQPMTPLEGITTLKADITHPSTIPLLLKALDPDDYTHDTSSTNNTTTKTPH 188
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
DLVLSD A G +D L AA A+ +L GG F+ K F+G +
Sbjct: 189 HHPHPVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVD 248
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
I LK F+KV KP +SRA S+E F++ +GF
Sbjct: 249 LIYAQLKTVFEKVSVAKPRSSRASSLEAFVVCEGF 283
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNT 96
GSWSQV +R+ +
Sbjct: 58 GSWSQVLSRVLIKGESFG 75
>gi|261205268|ref|XP_002627371.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces
dermatitidis SLH14081]
gi|239592430|gb|EEQ75011.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces
dermatitidis SLH14081]
Length = 405
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 23/155 (14%)
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-----------------------IRQ 130
N ++VAID+ M P+ G+ K D +
Sbjct: 129 KNVKIVAIDLQPMTPLEGITTLKADITHPSTIPLLLKALDPDDYTHDTSSTNNTTTKTPH 188
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
DLVLSD A G +D L AA A+ +L GG F+ K F+G +
Sbjct: 189 HHPHPVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVD 248
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
I LK F+KV KP +SRA S+E F++ +GF
Sbjct: 249 LIYAQLKTVFEKVSVAKPRSSRASSLEAFVVCEGF 283
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNT 96
GSWSQV +R+ +
Sbjct: 58 GSWSQVLSRVLIKGESFG 75
>gi|58579180|ref|YP_197392.1| ribosomal RNA large subunit methyltransferase J [Ehrlichia
ruminantium str. Welgevonden]
gi|81351125|sp|Q5FEH6|RLME_EHRRW RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|58417806|emb|CAI27010.1| Ribosomal RNA large subunit methyltransferase J [Ehrlichia
ruminantium str. Welgevonden]
Length = 129
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
+ +M I V F D + D+VLSDMA G++++DH ++LC
Sbjct: 1 MQEMSSIPNVIFILCDIANKIEL-LNSTFDKKKFDVVLSDMAPKACGNKQVDHANIINLC 59
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
E + A++ + G F+ K QG + +K HF V + KP ASR +S EM+L++
Sbjct: 60 EMSLEIAVKFIKPNGIFITKILQGEYEKEFYQSVKYHFNSVKYFKPKASRKDSSEMYLVS 119
Query: 223 KGFRK 227
GF++
Sbjct: 120 LGFKE 124
>gi|58617234|ref|YP_196433.1| ribosomal RNA large subunit methyltransferase J [Ehrlichia
ruminantium str. Gardel]
gi|75356966|sp|Q5FH15|RLME_EHRRG RecName: Full=Ribosomal RNA large subunit methyltransferase E;
AltName: Full=23S rRNA Um2552 methyltransferase;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|58416846|emb|CAI27959.1| Ribosomal RNA large subunit methyltransferase J [Ehrlichia
ruminantium str. Gardel]
Length = 129
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
+ M I V F D + D+VLSDMA G++++DH ++LC
Sbjct: 1 MQKMSSIPNVIFILCDIANNIEL-LNSTFDKKKFDVVLSDMAPKACGNKQVDHANIINLC 59
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
E + A++ + G F+ K QG + +K HF V + KP ASR +S EM+L++
Sbjct: 60 EMSLEIAVKFIKPNGIFITKILQGEYEKEFYQSVKYHFNSVKYFKPKASRKDSSEMYLVS 119
Query: 223 KGFRK 227
GF++
Sbjct: 120 LGFKE 124
>gi|213052989|ref|ZP_03345867.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 88
Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
V+SDMA G +D R M L E A ++L GG F+VK FQG ++ L ++
Sbjct: 1 VMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS 60
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV KP +SRA S E++++A G +
Sbjct: 61 LFTKVKVRKPDSSRARSREVYIVATGRK 88
>gi|215401335|ref|YP_002332639.1| hypothetical protein HaMNV_gp103 [Helicoverpa armigera multiple
nucleopolyhedrovirus]
gi|198448835|gb|ACH88625.1| hypothetical protein HaMNV_gp103 [Helicoverpa armigera multiple
nucleopolyhedrovirus]
Length = 271
Score = 93.3 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 7/182 (3%)
Query: 50 RSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPI 109
R YKL +I+EK + + VDL PG +++ + + D
Sbjct: 39 RCYYKLKEIDEKFNVCRDVDTFVDLCGGPGQFAKYLFTMNPDCVGYGVSLRNDCDYTFDH 98
Query: 110 LGVK-----FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
+ F D D + + +LV++D A+ G T+SL
Sbjct: 99 EHFRKIYGCFDSGDIFDANVMFELMYFCRKQCNLVVADGAFDVSGRENDQETLTLSLLRK 158
Query: 165 ATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ LE+L GG+ ++K F T +L +F + KP SRA + E +L+
Sbjct: 159 ECYIILEVLRTGGNCVLKIFDTFNRATISLLQSFIANFNEFYFYKPSHSRAANSEKYLVC 218
Query: 223 KG 224
KG
Sbjct: 219 KG 220
>gi|259483730|tpe|CBF79360.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 330
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS+ W R + D Y + A ++G ++R+A+KLLQI+EK+++ +S + +VDLG +PGS
Sbjct: 53 KRFSSSKRWQARQLKDHYTREAAVQGLKSRAAFKLLQIDEKYRVFKSGQTVVDLGYAPGS 112
Query: 81 WSQVAAR---ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPD 137
WSQV A RV+ +DI+ +P GV + +FLD + ++R +
Sbjct: 113 WSQVRATSSVALTRTRPAGRVLGVDIIPSQPPKGVSTIQGNFLDPEVQAYVRDFVRNPRR 172
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 36/70 (51%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH +M LC AA F+ E+L GG F+ K +QG + LK F KV
Sbjct: 247 MMNTSGVPFKDHAGSMDLCRAALEFSFEVLRAGGHFVCKFYQGAEDKILEKQLKVLFGKV 306
Query: 204 IHVKPVASRA 213
+KP +SR+
Sbjct: 307 HRLKPESSRS 316
>gi|322704731|gb|EFY96323.1| cell division protein ftsj, putative [Metarhizium anisopliae ARSEF
23]
Length = 288
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 53/244 (21%), Positives = 86/244 (35%), Gaps = 60/244 (24%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQ----------------INEKHQILQSNRRIVDL 74
R + D + + A+++G ++R+A+KLL+ ++ KH++ + + IVDL
Sbjct: 46 QRQVRDAFSRGAKVQGLKSRAAFKLLEVIYTAPPTNISSNALQMDSKHRLFKPGQTIVDL 105
Query: 75 GSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI-- 132
VA T + RV+ ID++ +P GV F+ DFL +R+ I
Sbjct: 106 ---------VAQERTRP---HGRVIGIDLIPAQPPRGVATFQGDFLSPGVQRLVREFIAR 153
Query: 133 ------------------------------GGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
GN D+ + MS
Sbjct: 154 TGRPVEKVERGEEGETMSYIDRERRASEEREGNGTSASVDVVLSDMSAPWDQTSGYMSNT 213
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ L + G LKK F KV KP +SR+ES E + +A
Sbjct: 214 LTNPYRRLMNTSGVAFRDHAGSMGSEDKKFEARLKKMFAKVFREKPESSRSESKEAYFIA 273
Query: 223 KGFR 226
R
Sbjct: 274 LKRR 277
>gi|18138392|ref|NP_542688.1| ORF65 [Helicoverpa zea SNPV]
gi|18028774|gb|AAL56210.1|AF334030_135 ORF65 [Helicoverpa zea SNPV]
Length = 274
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 90/233 (38%), Gaps = 14/233 (6%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M +S + ++K++ +S+ + R D + + R R +K+ +I+
Sbjct: 1 MTSSTITSKYKIKLDRLKSQLDEFTTSQIKVARDRLD----KRKSHRHR-RCWHKMKEID 55
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF-- 117
E+ + ++ R VDL PG ++ + + N+ V + LD + +
Sbjct: 56 ERFNLCRNVRLYVDLCGGPGQFANYISNNSTLNSQGYGVTLRNHLDYNVFVPNFCAVYGD 115
Query: 118 ----DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML 173
D + D + G DLV++D G L + L L+ L
Sbjct: 116 ANTGDIFEEDIQNKLNMLCGHRCDLVVADGGIDVYGKENDQELIMLPLIAKQCEIILDCL 175
Query: 174 NIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+GG+ ++K F N L +F + KPV+SR + E +L+
Sbjct: 176 RVGGNSVLKIFDTFARNTFVVLESFISNFSEFYVFKPVSSRPANAERYLVCLN 228
>gi|145484697|ref|XP_001428358.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395443|emb|CAK60960.1| unnamed protein product [Paramecium tetraurelia]
Length = 282
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI-RQAIGGNPD 137
+ + + + R+V++D+ +M P+ V + D + + I ++ D
Sbjct: 79 IYVLHLLSEKNYLPSESCRIVSVDLQEMAPLDHVTQIQGDITKKTTVDEILKKFNYQRAD 138
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK 197
+++ D A G ID+ L AA L L G F+ K F+G + K
Sbjct: 139 IIVCDGAPDVTGFHDIDYYIQSQLIVAALNICLMTLRENGIFVAKIFKGSDIKLLYSQFK 198
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGF 225
F +V +KP +SRA SVE F++ +
Sbjct: 199 LFFNQVYFMKPKSSRASSVEYFIICLQY 226
>gi|116326137|ref|YP_803463.1| putative methyltransferase [Anticarsia gemmatalis
nucleopolyhedrovirus]
gi|112180875|gb|ABI13852.1| putative methyltransferase [Anticarsia gemmatalis
nucleopolyhedrovirus]
Length = 274
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 75/208 (36%), Gaps = 16/208 (7%)
Query: 34 INDPYVQRAQLEGW------RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+D ++RA+ + R R KL +I+++ ++ Q+ +DL PG ++
Sbjct: 21 FSDAQIKRARARLFDDALTRRPRCWRKLAEIDKQFKVCQNVNTALDLCGGPGEFADYIMS 80
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ--------AIGGNPDLV 139
S +A + + F + + + + G DLV
Sbjct: 81 CNASCRLYGVTLATNAPYKRRVRNQTNFCAVIGPDATGDVLDKNVLFDLSVKCGNACDLV 140
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLLK 197
L+D A G L T AL L GG+ ++K F + L
Sbjct: 141 LADGAVDVTGRENDQERLNAPLIMRETQLALICLRPGGNCVIKVFDAFDDETLNMLANFV 200
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGF 225
HF + VKP +SR + E +L+
Sbjct: 201 CHFARWRLVKPPSSRPSNSERYLVCLNK 228
>gi|209401119|ref|YP_002273988.1| putative methyl transferase [Helicoverpa armigera NPV NNg1]
gi|209364371|dbj|BAG74630.1| putative methyl transferase [Helicoverpa armigera NPV NNg1]
Length = 274
Score = 92.9 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/233 (20%), Positives = 90/233 (38%), Gaps = 14/233 (6%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M +S + ++K++ +S+ + R D + + R R +K+ +I+
Sbjct: 1 MTSSTITSKYKMKLDRLKSQLDEFTTSQIKVARDRLD----KRKSHRHR-RCWHKMKEID 55
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF-- 117
E+ + ++ R VDL PG ++ + + N+ V + LD + +
Sbjct: 56 ERFNLCRNVRLYVDLCGGPGQFANYISNNSTLNSQGYGVTLRNHLDYNVFVPNFCAVYGD 115
Query: 118 ----DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML 173
D + D + G DLV++D G L + L L+ L
Sbjct: 116 ANTGDIFEEDIQNKLNMLCGHRCDLVVADGGIDVYGKENDQELIMLPLIAKQCEIILDCL 175
Query: 174 NIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+GG+ ++K F N L +F + KPV+SR + E +L+
Sbjct: 176 RVGGNSVLKIFDTFARNTFVVLESFISNFSEFYVFKPVSSRPANAERYLVCLN 228
>gi|96979846|ref|YP_611052.1| met [Antheraea pernyi nucleopolyhedrovirus]
gi|94983379|gb|ABF50319.1| met [Antheraea pernyi nucleopolyhedrovirus]
Length = 263
Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 65/188 (34%), Gaps = 10/188 (5%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R R KL +I+ + + + +DL PG ++ +A +
Sbjct: 35 RPRCWRKLAEIDRQFGVCRGVNTALDLCGGPGEFAAYTLARNPLCRMFGVTLAANAPYKR 94
Query: 108 PILGVKFFKFDFLDLDSWEFIRQ--------AIGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
+ G F + + + + A G DLVL+D A G
Sbjct: 95 AVRGRANFTAVMGPDGTGDVLDKNVLFDLSVACGNACDLVLADGAVDADGREDAQERLNA 154
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAESVE 217
L T AL L GG ++K F + L HF + VKP +SR + E
Sbjct: 155 PLILRETQLALICLRPGGHCVLKVFDAFHDETLRALERFVGHFARWRLVKPPSSRPANSE 214
Query: 218 MFLLAKGF 225
+L+ G
Sbjct: 215 RYLVCLGK 222
>gi|38048043|gb|AAR09924.1| similar to Drosophila melanogaster CG5220 [Drosophila yakuba]
Length = 191
Score = 92.5 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 2/144 (1%)
Query: 84 VAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--DLVLS 141
A T +++A+D+ M PI G+ + D + E I GGN LV+
Sbjct: 6 YDACETDDEKAAVKIIAVDLQAMAPIRGILQLQGDITKQSTAEAIIGHFGGNEKAQLVVC 65
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
D A G ++D L AA A +L GG F+ K F+G T+ + ++ F+
Sbjct: 66 DGAPDVTGVHEMDEYMQHQLLVAALSIATCVLETGGTFVAKIFKGNATSLLSSQMQIFFK 125
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
K KP +SR S+E F++ F
Sbjct: 126 KFDIYKPPSSRPSSIEAFVVCSDF 149
>gi|171463556|ref|YP_001797669.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|171193094|gb|ACB44055.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 170
Score = 92.5 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/167 (35%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 74 LGSSPGSWSQVAARI----------TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLD 123
+GS+PGSWSQ A S + +++AIDIL ME I V F + DF + +
Sbjct: 1 MGSAPGSWSQYARNRLIELGKSNPKIESGKPDGQIIAIDILPMEDIADVSFIQGDFREEE 60
Query: 124 SWEFIRQAIG----GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+ + G DLVLSDMA G D R L E A FA+ L G
Sbjct: 61 GLAALEALLPKGAEGKVDLVLSDMAPNLSGVEVADAARMAFLAEIALDFAVAHLKPEGAL 120
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+K F G + I+ KK F+ V KP ASRA E+FLL + +
Sbjct: 121 LIKCFNGSGYSQIVESFKKVFKTVASRKPKASRARFSEIFLLGRNLK 167
>gi|225561193|gb|EEH09474.1| 2'-O-ribose methyltransferase [Ajellomyces capsulatus G186AR]
Length = 381
Score = 92.1 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 19/151 (12%)
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-------------------AIGG 134
N ++VAID+ M P+ G+ K D + + +
Sbjct: 127 KNVKIVAIDLQPMTPLDGITCLKADITHPSTIPLLLEALDPDNYTHNDTLTTTRTSHRLH 186
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
DLVLSD A G +D L AA A+ +L GG F+ K F+G + I
Sbjct: 187 PVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDLIYA 246
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
LK F+ V KP +SRA S+E F++ +GF
Sbjct: 247 QLKTVFETVSVAKPRSSRASSLEAFVVCEGF 277
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 10/79 (12%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSNPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNTR 97
GSWSQV +R+ + R
Sbjct: 58 GSWSQVLSRVLIKGESFGR 76
>gi|328858221|gb|EGG07334.1| hypothetical protein MELLADRAFT_28887 [Melampsora larici-populina
98AG31]
Length = 224
Score = 92.1 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 93/224 (41%), Gaps = 21/224 (9%)
Query: 23 QGSSRDWLNRHINDPYVQ-RAQLEG---WRARSAYKLLQINEKHQILQSN----RRIVDL 74
SS+ +L R D Y + + G + ARSA+KL +++ ++ + ++DL
Sbjct: 2 SSSSKRFLRRAQTDTYGKTKCSNRGEKVYVARSAHKLNSLDQTLKLFSKHYHGTMNVLDL 61
Query: 75 GSSPGSWSQVA-ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
G+SPG W++V A + + V + I G F +
Sbjct: 62 GASPGGWTEVLIACDLLPLSRSIYVDVPSNTKLSFIQG-DFLNQEIQYKIIEALQSNLQP 120
Query: 134 GNP----DLVLSDMAYPTIGHRKIDHLRTMSLCEAATF-------FALEMLNIGGDFLVK 182
++LSD+ G D ++ LC + + + ++K
Sbjct: 121 KPNPSIPTIILSDLLGSMSGIPIKDAQNSLDLCLSVSQLAQTVLQETQIEGHEDDTLVIK 180
Query: 183 TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
Q G T+++ LK +++ V +KP+ASR+ES E + +A+ +
Sbjct: 181 HIQSGLTDELRNHLKSNWKSVRWIKPLASRSESREGYFIARQRK 224
>gi|12597548|ref|NP_075132.1| hypothetical protein HanGV4gp063 [Helicoverpa armigera
nucleopolyhedrovirus G4]
gi|15426323|ref|NP_203618.1| hypothetical protein [Helicoverpa armigera NPV]
gi|12483814|gb|AAG53806.1|AF271059_63 unknown [Helicoverpa armigera nucleopolyhedrovirus G4]
gi|15384399|gb|AAK96310.1|AF303045_52 unknown [Helicoverpa armigera NPV]
Length = 274
Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/233 (19%), Positives = 90/233 (38%), Gaps = 14/233 (6%)
Query: 1 MVKPPGSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQIN 59
M +S + ++K++ +S+ + R D + + R R +K+ +++
Sbjct: 1 MTSSTITSKYKIKLDRLKSQLDEFTTSQIKVARDRLD----KRKSHRHR-RCWHKMKELD 55
Query: 60 EKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF-- 117
E+ + ++ R VDL PG ++ + + N+ V + LD + +
Sbjct: 56 ERFNLCRNVRLYVDLCGGPGQFANYISNNSTLNSQGYGVTLRNHLDYNVFVPNFCAVYGD 115
Query: 118 ----DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML 173
D + D + G DLV++D G L + L L+ L
Sbjct: 116 ANTGDIFEEDIQNKLNMLCGHRCDLVVADGGIDVYGKENDQELIMLPLIAKQCEIILDCL 175
Query: 174 NIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+GG+ ++K F N L +F + KPV+SR + E +L+
Sbjct: 176 RVGGNSVLKIFDTFARNTFVVLESFISNFSEFYVFKPVSSRPANAERYLVCLN 228
>gi|146229746|gb|ABQ12311.1| putative methly transferase [Antheraea pernyi nucleopolyhedrovirus]
Length = 264
Score = 91.7 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 65/188 (34%), Gaps = 10/188 (5%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R R KL +I+ + + + +DL PG ++ +A +
Sbjct: 35 RPRCWRKLAEIDRQFGVCRGVNTALDLCGGPGEFAAYTLARNPLCRMFGVTLAANAPYKR 94
Query: 108 PILGVKFFKFDFLDLDSWEFIRQ--------AIGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
+ G F + + + + A G DLVL+D A G
Sbjct: 95 AVRGRANFTAVMGPDGTGDVLDKNVLFDLSVACGNACDLVLADGAVDADGREDAQERLNA 154
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAESVE 217
L T AL L GG ++K F + L HF + VKP +SR + E
Sbjct: 155 PLILRETQLALICLRPGGHCVLKVFDAFHDETLRALERFVGHFARWRLVKPPSSRPANSE 214
Query: 218 MFLLAKGF 225
+L+ G
Sbjct: 215 RYLVCLGK 222
>gi|22549506|ref|NP_689284.1| hypothetical protein [Mamestra configurata NPV-B]
gi|22476685|gb|AAM95091.1| hypothetical protein [Mamestra configurata NPV-B]
Length = 275
Score = 91.4 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 7/182 (3%)
Query: 50 RSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPI 109
R YKL +I+EK + + VDL PG +++ + + D
Sbjct: 39 RCYYKLKEIDEKFNVCRDVDTFVDLCGGPGQFAKYVFMMNPDCVGYGVSLRNDCDYTFDH 98
Query: 110 LGVK-----FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
+ F D D + + +LV++D A+ G T+SL
Sbjct: 99 EHFRKIYGCFDSGDIFDANVMFELMYFCRKQCNLVVADGAFDVSGRENDQETLTLSLLRK 158
Query: 165 ATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ LE+L GG+ ++K F T +L +F + KP SRA + E +L+
Sbjct: 159 ECYIILEVLRTGGNCVLKIFDTFNRATISLLQSFIANFNEFYFYKPTHSRAANSEKYLVC 218
Query: 223 KG 224
KG
Sbjct: 219 KG 220
>gi|322826644|gb|EFZ31154.1| ribosomal RNA methyltransferase, putative [Trypanosoma cruzi]
Length = 268
Score = 91.0 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 65/235 (27%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR---IVDLGSSPGSWSQVAAR 87
++ D Y ++A+ EG+RARSAYKLLQ+ E+ IL + +VDL ++PGSWSQ+ +R
Sbjct: 31 SKDKRDIYYRKAKEEGYRARSAYKLLQLQEEFNILNRDDIQTGVVDLCAAPGSWSQLLSR 90
Query: 88 IT---------GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF----------- 127
++ R+VA+D+ +M PI GV+ + D +
Sbjct: 91 HLREEVGGRTEKQSSGAPRIVAVDLQEMMPIEGVQLLQGDITSETTAREIIRLINIKEDT 150
Query: 128 ------------------------------------------IRQAIGGNPDLVLSDMAY 145
+ DLV+ D A
Sbjct: 151 ASVNDAYVDSEEDKSAIQTEKGGRSTARRPSLAPGERNSYSDHTNSCEKKADLVVCDGAP 210
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
G ++D L AA +L GG F+ K F+G T ++ + F
Sbjct: 211 DVTGMHELDEYLQHHLLLAALNITTFVLRCGGTFVTKIFRGPNTPFLVAKSEVFF 265
>gi|242037577|ref|XP_002466183.1| hypothetical protein SORBIDRAFT_01g003090 [Sorghum bicolor]
gi|241920037|gb|EER93181.1| hypothetical protein SORBIDRAFT_01g003090 [Sorghum bicolor]
Length = 233
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 83/226 (36%), Gaps = 35/226 (15%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D + + + G+ ARSA+KL+Q+ ++H+++ ++DLG +PG+W QVA + G
Sbjct: 8 DFFYRESLRLGYVARSAFKLIQMQKQHKLIAPGAAVLDLGCAPGAWLQVACQNLGPLEKG 67
Query: 96 TRVVAIDILDMEPILGVKFFKF-------DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTI 148
VV +D+ + + ++LSDM P
Sbjct: 68 GVVVGVDVHQKVKVPSAHCDSRVRTVRADVMTMMKQQARAMSPQERGFSVILSDMCPPVS 127
Query: 149 GHRKIDHLRTMSLCE------------------AATFFALEMLNIG----------GDFL 180
G D + L L G+ +
Sbjct: 128 GITTKDGAISCELGMRALSLAVGKIKLKESDYSEILEKYLSSTEPDPDEDGVLRRGGNLV 187
Query: 181 VKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+K + + K F+KV ++P A+R S E++++ +G R
Sbjct: 188 MKFLENEDISGFGKFCKVKFKKVSLLRPKATRPSSREIYMICEGLR 233
>gi|90592813|ref|YP_529766.1| ORF-96 [Agrotis segetum nucleopolyhedrovirus]
gi|71559263|gb|AAZ38262.1| ORF-96 [Agrotis segetum nucleopolyhedrovirus]
Length = 280
Score = 90.6 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 7/185 (3%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R R +KL I++K I + +DL PG +++ + + D
Sbjct: 45 RDRCFHKLKNIDDKFGICRDVGVFLDLCGGPGQFAKYIFSVNEDCVGYGVTLRNDCDYSF 104
Query: 108 PILGVK-----FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
+ F D D + + DLV++D A+ G ++SL
Sbjct: 105 SHPNFRKMYGCFDTGDIFDANVLFEVMYFCRQKCDLVVADGAFDVRGCENDQETLSLSLL 164
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFL 220
+E L +GG+ ++K F T +L HF K KP SRA + E +L
Sbjct: 165 RKECSVIVETLRVGGNCVLKVFDTFNCSTISLLENFVSHFTKHYLYKPSHSRAANSEKYL 224
Query: 221 LAKGF 225
+ KG
Sbjct: 225 VCKGK 229
>gi|15320719|ref|NP_203231.1| hypothetical protein [Epiphyas postvittana NPV]
gi|2708645|gb|AAB92561.1| ORF69 homolog [Epiphyas postvittana NPV]
gi|15213187|gb|AAK85626.1| unknown [Epiphyas postvittana NPV]
Length = 268
Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 78/208 (37%), Gaps = 16/208 (7%)
Query: 34 INDPYVQRAQLEGW------RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+D +++RA+ + + R KL +I++ ++ ++ +DL PG ++
Sbjct: 16 FDDAHIKRARARLFDGALERKPRCWRKLAEIDKHFKVCRNVNTALDLCGGPGEFAAYTMA 75
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ--------AIGGNPDLV 139
+ + + F + + + + A G DLV
Sbjct: 76 RNPLCRVFGVTLIANAPYKRVVQNHSNFVNVVGPDGTGDVLDKNVLFDLSVACGNACDLV 135
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLK 197
L+D A G +L T AL L +GG+ ++K F T D+L
Sbjct: 136 LADGAVDAAGRENEQETINRALILRETQLALICLRVGGNCVLKVFDAFHNETLDVLERFA 195
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGF 225
+HF + KP +SR + E +L+
Sbjct: 196 RHFARWRLFKPPSSRPANSERYLVCINK 223
>gi|300708035|ref|XP_002996206.1| hypothetical protein NCER_100740 [Nosema ceranae BRL01]
gi|239605486|gb|EEQ82535.1| hypothetical protein NCER_100740 [Nosema ceranae BRL01]
Length = 171
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 7/164 (4%)
Query: 25 SSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV 84
S L + D Y A+ +G+RARSA+KLLQ+N+K+ L+ + ++DL ++PG W QV
Sbjct: 2 SKNRSLGKQRLDKYYNLAKEKGYRARSAFKLLQLNKKYGFLKDAKILIDLCAAPGGWLQV 61
Query: 85 AARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR----QAIGGNPDLVL 140
AA+ +++ ID+ ++ I V+ F D + + + D++L
Sbjct: 62 AAQEMPR---PRKIIGIDLDPIKYIGDVETFVCDITSDECRKRLYGMLSDTEFRQADVIL 118
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF 184
D A + D L + + K F
Sbjct: 119 HDGAPNVGTSWENDAFNQNLLVFYSLQLSSPFFARRRYICNKDF 162
>gi|20069990|ref|NP_613194.1| hypothetical protein McnAVgp111 [Mamestra configurata NPV-A]
gi|20043384|gb|AAM09219.1| unknown [Mamestra configurata NPV-A]
gi|33331822|gb|AAQ11130.1| hypothetical protein [Mamestra configurata NPV-A]
Length = 275
Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 7/182 (3%)
Query: 50 RSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPI 109
R +KL +I+EK + + VDL PG +++ + D
Sbjct: 39 RCYHKLKEIDEKFNVCRDVDTFVDLCGGPGQFAKYVFSTNPDCVGYGVTLRNDCDYTFDH 98
Query: 110 LGVK-----FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
+ F D D + + +LV++D A+ G T+SL
Sbjct: 99 KHFRKIYGCFDSGDIFDANVMFELMYFCRKRCNLVVADGAFDVSGRENDQETLTLSLLRK 158
Query: 165 ATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ LE+L GG+ ++K F T +L +F + KP SRA + E +L+
Sbjct: 159 ECYIILEVLRAGGNCVLKIFDTFNRATISLLQSFIVNFDEFYFYKPTHSRAANSEKYLVC 218
Query: 223 KG 224
KG
Sbjct: 219 KG 220
>gi|258575121|ref|XP_002541742.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Uncinocarpus reesii
1704]
gi|237902008|gb|EEP76409.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Uncinocarpus reesii
1704]
Length = 245
Score = 89.8 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND 191
DLVLSD A G +D L AA A+ +L GG F+ K F+G +
Sbjct: 49 HSHPVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVDL 108
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
I LK F++V KP +SRA S+E F++ +GF
Sbjct: 109 IYAQLKTVFERVSVAKPRSSRASSLEAFVVCEGF 142
>gi|296419711|ref|XP_002839439.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635592|emb|CAZ83630.1| unnamed protein product [Tuber melanosporum]
Length = 227
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 1/121 (0%)
Query: 106 MEPILGVKFFKFDFLDLDSWEFI-RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
M P+ GV + D + + R DLV+SD A G +D L A
Sbjct: 1 MTPLPGVTTLQADITHPSTLPLLLRHLGNKPADLVISDGAPDVTGLHDLDEYIQSQLLLA 60
Query: 165 ATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
A A +L GG F+ K F+G + L+ F +V KP +SR S+E F++ +G
Sbjct: 61 ALNLATCVLKPGGGFVAKIFRGRDVAIVFAQLRCLFDRVTCAKPRSSRGSSIEAFVVCEG 120
Query: 225 F 225
+
Sbjct: 121 Y 121
>gi|115400479|ref|XP_001215828.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Aspergillus terreus
NIH2624]
gi|114191494|gb|EAU33194.1| tRNA (uridine-2'-O-)-methyltransferase TRM7 [Aspergillus terreus
NIH2624]
Length = 474
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA-----------------IGGNP 136
N ++V+ID+ M P+ G+ K D + + +A
Sbjct: 15 KNVKIVSIDLQPMAPLEGITTLKADITHPSTIPLLLRALDPDAYDSSSASPSALRPPHPV 74
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLV+SD A G +D L AA AL +L GG F+ K F+G + I L
Sbjct: 75 DLVISDGAPDVTGLHDLDIYIQSQLLYAALNLALGVLRPGGKFVAKIFRGRDVDIIYAQL 134
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ F+KV KP +SRA S+E F++ +GF
Sbjct: 135 RTVFEKVSVAKPRSSRASSLESFVVCEGF 163
>gi|22788745|ref|NP_690456.1| putative methyl transferase [Heliothis zea virus 1]
gi|22671505|gb|AAN04332.1|AF451898_36 putative methyl transferase [Heliothis zea virus 1]
Length = 943
Score = 89.4 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 14/230 (6%)
Query: 8 SSRRGLTQKVKNR-SCQGSSR--DWLNRHINDPYVQRAQLEGWRARSAYKLLQINE--KH 62
S+ R ++K R S+ W N D + + + R +KL ++++
Sbjct: 134 STLRQKLVRLKERVFKNCKSKLPTWNN---TDETINMVRSQSCINRCFFKLAEMDQLSNF 190
Query: 63 QILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILG---VKFFKFDF 119
++ +DL + PG +++ SN + +E + VK + D
Sbjct: 191 RLSNDAGLFMDLCAGPGGFTEYLTYKNWSNFGIVLQHRDLPVQIEKLPNPAAVKVYTVDL 250
Query: 120 LDLDSWEFIRQAIGG-NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
L+ + R +G DLV++D + G + L A A + + +GG+
Sbjct: 251 LNAHDRDRFRHDMGIVKVDLVVADGSIDCRGRENLQEPLNYDLIRAQVDVAFDHIKVGGN 310
Query: 179 FLVKTFQGGTTN--DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F++KTF T ++ + HF++ VKP SR + E +++A ++
Sbjct: 311 FVLKTFDAFTNQMLNLYYEIYSHFEEFTVVKPNTSRPANAERYIVAMNYK 360
>gi|330916680|ref|XP_003297518.1| hypothetical protein PTT_07944 [Pyrenophora teres f. teres 0-1]
gi|311329755|gb|EFQ94378.1| hypothetical protein PTT_07944 [Pyrenophora teres f. teres 0-1]
Length = 316
Score = 89.0 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
W +R D + + A+++G ++R+A+KLL++N+KH++ + + +VDLG +PGSWSQVA
Sbjct: 13 TRWKSRQGRDFFAKEARVKGLKSRAAFKLLELNDKHKLFKPGQTVVDLGFAPGSWSQVAV 72
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN 135
T + RV+ ID++ +P GV + +FL E +R +
Sbjct: 73 NRTLPD---GRVIGIDLIPAQPPRGVSTLQGNFLSPVIQEELRAYVRDP 118
Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 43/84 (51%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G+ DH +M LC AA FA + L GG FL K ++G +K+ F KV
Sbjct: 223 MMNTSGNAFRDHAGSMDLCMAAMTFAFDTLKTGGHFLCKYYKGSEEKAFETRMKRLFAKV 282
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
KP +SRAES E + + G ++
Sbjct: 283 HREKPDSSRAESKEAYFVGLGRKE 306
>gi|209170985|ref|YP_002268132.1| agip102 [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436576|gb|ACI28803.1| unknown [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 290
Score = 88.3 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 10/184 (5%)
Query: 51 SAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEP-- 108
+K+ +I++K + ++ +DL PG +++ + + V + D
Sbjct: 47 CYFKIKEIDDKFTVCRNINVFLDLCGGPGQFAKYVFNVNDDDCLGFGVTLRNHCDYNFSH 106
Query: 109 -----ILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCE 163
+ G F D D + + DLVL+D A+ G ++SL
Sbjct: 107 PNFRKMYGC-FDTGDIFDANVLFELMYFCRHKCDLVLADGAFDVAGRENDQETLSLSLIR 165
Query: 164 AATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
LE L +GG +VK F +T +L HF++ KP SRA + E +L+
Sbjct: 166 KECSVILEALRVGGSCVVKIFDTFNNSTISLLRNFVGHFEQHHLYKPPHSRAANSEKYLV 225
Query: 222 AKGF 225
KG
Sbjct: 226 CKGK 229
>gi|68059132|ref|XP_671546.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487824|emb|CAI03817.1| hypothetical protein PB301372.00.0 [Plasmodium berghei]
Length = 325
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 1/159 (0%)
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE 126
+ I+ + S + N + + + ++ + E
Sbjct: 52 NYINIIQGDITKMSTINKILKCMNENEKDIEFSVNSPKHIYDEDSSIKYNKMKNNILNKE 111
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
V+SD A G ID L ++ +L IGG+F+ K F+G
Sbjct: 112 KENNKFV-YAHAVVSDGAPDITGMNDIDEFIQSQLILSSLKVCCSVLKIGGNFISKIFRG 170
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
T+ ++ L K F+K+ KP +SR +S+E FL+ F
Sbjct: 171 EYTSLLIFHLNKFFEKIYVCKPQSSRNKSLESFLVCLNF 209
>gi|37651383|ref|NP_932674.1| putative methly transferase [Choristoneura fumiferana DEF MNPV]
gi|37499292|gb|AAQ91691.1| putative methly transferase [Choristoneura fumiferana DEF MNPV]
Length = 274
Score = 88.3 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 67/188 (35%), Gaps = 10/188 (5%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R R KL +I+++ ++ Q +DL PG ++ S +A +
Sbjct: 41 RPRCWRKLAEIDKQFKVCQGVNTALDLCGGPGEFAAYTMSCNASCRVYGVTLAANAPYKR 100
Query: 108 PILGVKFFKFDFLDLDSWEFIRQ--------AIGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
+ F + + + + G DLVL+D A G
Sbjct: 101 TVRNQANFCAVMGPDATGDVLDKNVLFDLSVKCGNACDLVLADGAVDVTGRENDQERLNA 160
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAESVE 217
L T AL L GG+ ++K F I L +HF + VKP +SR + E
Sbjct: 161 PLIMRETQLALICLRPGGNCIIKVFDAFDDETINMLANFVRHFARWRLVKPPSSRPSNSE 220
Query: 218 MFLLAKGF 225
+L+
Sbjct: 221 RYLVCINK 228
>gi|30387297|ref|NP_848376.1| hypothetical protein CfMNPVgpORF65 [Choristoneura fumiferana MNPV]
gi|30270031|gb|AAP29847.1| unknown [Choristoneura fumiferana MNPV]
Length = 266
Score = 87.9 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 64/189 (33%), Gaps = 12/189 (6%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R R KL +I+++ + + +DL PG ++ + + +
Sbjct: 36 RPRCWRKLAEIDKRFNVCRGVNTALDLCGGPGEFAAYTLWRSPLCRVFGVTLTRNAPYKR 95
Query: 108 PIL---GVKFFKFDFLDLDSWEFIRQA-----IGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
+ D + G +LVL+D A + G
Sbjct: 96 AVYAHSNFTAVLGPDGTGDVLDKNVLFDLSVTCGNACELVLADGAVDSTGREDEQERLNA 155
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQ---GGTTNDILCLLKKHFQKVIHVKPVASRAESV 216
L T AL L GG+ ++K F G T + + HF +KP +SR +
Sbjct: 156 PLILRETQLALICLRPGGNCVLKVFDAFYGETLRTLQQFAR-HFASWRLMKPPSSRPSNS 214
Query: 217 EMFLLAKGF 225
E +L+ G
Sbjct: 215 ERYLVCLGK 223
>gi|198477577|ref|XP_002136545.1| GA23223 [Drosophila pseudoobscura pseudoobscura]
gi|198142832|gb|EDY71545.1| GA23223 [Drosophila pseudoobscura pseudoobscura]
Length = 232
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 106 MEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
M PI GV + D + E I + G LV+SD A + G D L +
Sbjct: 1 MAPIDGVHQLRADITKESTAEAIIEYFEGQKAQLVVSDGAPDSTGMHDFDVYMQGELLLS 60
Query: 165 ATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
A + +L GG + K ++ T+ + L++ F+ V KP ASR S+E F++A+
Sbjct: 61 ALSISTFILETGGSLVAKIYRADNTSRLYLQLQRFFKDVCVFKPSASRNSSIEAFVVARQ 120
Query: 225 F 225
F
Sbjct: 121 F 121
>gi|86355601|ref|YP_473269.1| MET [Hyphantria cunea nucleopolyhedrovirus]
gi|86198206|dbj|BAE72370.1| MET [Hyphantria cunea nucleopolyhedrovirus]
Length = 269
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 67/190 (35%), Gaps = 10/190 (5%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD 105
R R KL +I+++ + + ++DL PG ++ +A +
Sbjct: 34 NQRPRCWRKLAEIDKQFGVCRGVATVLDLCGGPGEFASYILAHNPMCRVFGVTLAANAPY 93
Query: 106 MEPILGVKFFKFDFLDLDSWEFIRQ--------AIGGNPDLVLSDMAYPTIGHRKIDHLR 157
+ F + + + A G DLVL+D A + G
Sbjct: 94 KRGVCTHSNFTAVLGPDATGDVFNKNVLFDLSVACGNACDLVLADGAVDSQGRENDQEQL 153
Query: 158 TMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAES 215
L T AL L +GG+ ++K F + L HF VKP +SR +
Sbjct: 154 NAPLMLRETQLALICLRLGGNCVLKVFDAFQHETLRVLQQFVCHFASWRLVKPPSSRPSN 213
Query: 216 VEMFLLAKGF 225
E +L+ G
Sbjct: 214 SERYLVCFGK 223
>gi|124506721|ref|XP_001351958.1| ribosomal RNA methyltransferase, putative [Plasmodium falciparum
3D7]
gi|23504986|emb|CAD51769.1| ribosomal RNA methyltransferase, putative [Plasmodium falciparum
3D7]
Length = 507
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 2/156 (1%)
Query: 70 RIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR 129
IV + I G + + I I + F +++ +
Sbjct: 145 NIVAVDLQEIGNMNYVKIIQGDITKMSTIDKILKCMNNKINSDEENVNVFYNMEQQKKEN 204
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTT 189
V+SD A G ID L ++ +L +GG+F+ K F+G T
Sbjct: 205 NF--SYAHTVVSDGAPDITGMNDIDEFIQSQLILSSLKVCCSVLKVGGNFISKIFRGEHT 262
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ L K FQ+V KP +SR +S+E FL+ F
Sbjct: 263 GLLILHLNKFFQRVYICKPQSSRNKSLESFLVCLNF 298
Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 64/180 (35%), Gaps = 22/180 (12%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ----------------------S 67
L++ D Y ++A+ G+RARS++KL+QINEK IL+
Sbjct: 4 LSKDRRDIYYRKAKESGYRARSSFKLIQINEKFGILKLFKPDIYNCNNEKDLINIYNEHY 63
Query: 68 NRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF 127
IVDL ++PGSWSQV I N + + E I ++ +F +
Sbjct: 64 CYNIVDLCAAPGSWSQVLKNICLYNYYQILYMINKYNNNENIKNIQHEEFLNKFSLYINY 123
Query: 128 IRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
+ +L + +D ++ D ++K
Sbjct: 124 NEELENKIKNLKIKCSNIKEPNIVAVDLQEIGNMNYVKIIQGDITKMSTIDKILKCMNNK 183
>gi|119607628|gb|EAW87222.1| hCG17134, isoform CRA_a [Homo sapiens]
Length = 162
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQAIGGNPDLVL-SDMAYPTI 148
++ V+ +D+L + P+ G F D D + + I + + G V+ SDMA
Sbjct: 17 PSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNAT 76
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G R +DH R +SLC ++L GG FL KT+ G + + L + FQ V +KP
Sbjct: 77 GFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKP 136
Query: 209 VASRAESVEMFLLAKGF 225
ASR ES E++ LA +
Sbjct: 137 EASRKESSEVYFLATQY 153
>gi|145477769|ref|XP_001424907.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391974|emb|CAK57509.1| unnamed protein product [Paramecium tetraurelia]
Length = 276
Score = 87.1 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFI-RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
M P+ V + D + + I ++ D+++ D A G ID+
Sbjct: 97 SCRIMAPLDHVTQIQGDITKKTTVDEILKKFNYQRADIIVCDGAPDVTGFHDIDYYIQSQ 156
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFL 220
L AA L L G F+ K F+G + K F +V +KP +SRA SVE F+
Sbjct: 157 LIVAALNICLMTLRENGIFVAKIFKGSDIKLLYSQFKLFFNQVYFMKPKSSRASSVEYFI 216
Query: 221 LAKGF 225
+ +
Sbjct: 217 ICLQY 221
>gi|145638913|ref|ZP_01794521.1| 23S rRNA methyltransferase J [Haemophilus influenzae PittII]
gi|145271885|gb|EDK11794.1| 23S rRNA methyltransferase J [Haemophilus influenzae PittII]
Length = 84
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGS 76
+ + SS WLN H +D +VQ+A + R+R+ +K+ +I + ++ + +VDLG+
Sbjct: 1 MGKKKRSASSSRWLNEHFSDQFVQKAHKQKLRSRAYFKIDEIQQTDKLFKQGMTVVDLGA 60
Query: 77 SPGSWSQVAARITGSNA 93
+PG WSQ G
Sbjct: 61 APGGWSQYVVSQIGGKG 77
>gi|221054440|ref|XP_002258359.1| ribosomal rna methyltransferase [Plasmodium knowlesi strain H]
gi|193808428|emb|CAQ39131.1| ribosomal rna methyltransferase, putative [Plasmodium knowlesi
strain H]
Length = 534
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 2/159 (1%)
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE 126
+I+ + S Q R + + D K D +
Sbjct: 156 KYVQIIQGDITKASTVQEILRCMKEGGAGNGIHDDNCEDDNLEGSAK--NKWTDQEDGQK 213
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
R+ + V+SD A G ID L ++ +L IGG+F+ K F+G
Sbjct: 214 AERKNVPTYAHAVVSDGAPDITGMNDIDEFIQSQLILSSLKVCCSVLKIGGNFISKIFRG 273
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
T ++ L K F++V KP +SR +S+E FL+ F
Sbjct: 274 EHTGLLILHLNKFFERVYVCKPQSSRNKSLESFLVCLNF 312
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
L++ D Y ++A+ G+RARS++KL+QINEK I +
Sbjct: 4 LSKDRRDIYYRKAKENGYRARSSFKLIQINEKFGIFK 40
>gi|68072251|ref|XP_678039.1| ribosomal RNA methyltransferase [Plasmodium berghei strain ANKA]
gi|56498377|emb|CAH98756.1| ribosomal RNA methyltransferase, putative [Plasmodium berghei]
Length = 487
Score = 86.7 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 1/159 (0%)
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE 126
+ I+ + S + N + + + ++ + E
Sbjct: 156 NYINIIQGDITKMSTINKILKCMNENEKDIEFSVNSPKHIYDEDSSIKYNKMKNNILNKE 215
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
V+SD A G ID L ++ +L IGG+F+ K F+G
Sbjct: 216 KENNKFV-YAHAVVSDGAPDITGMNDIDEFIQSQLILSSLKVCCSVLKIGGNFISKIFRG 274
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
T+ ++ L K F+K+ KP +SR +S+E FL+ F
Sbjct: 275 EYTSLLIFHLNKFFEKIYVCKPQSSRNKSLESFLVCLNF 313
Score = 61.3 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 22/110 (20%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ----------------------S 67
L++ D Y ++A+ G+RARS+YKL+QIN+K +I +
Sbjct: 4 LSKDRRDIYYRKAKENGYRARSSYKLIQINDKFEIFKLFNPNKYNNSDISEIIKKYNDEY 63
Query: 68 NRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKF 117
IVDL ++PGSWSQV I N N + + +F K
Sbjct: 64 CYNIVDLCAAPGSWSQVLKNICLYNYYNMLYFNKNNNMNNELDHEEFIKN 113
>gi|237643608|ref|YP_002884298.1| Ac69-like protein [Bombyx mandarina nucleopolyhedrovirus]
gi|229358154|gb|ACQ57249.1| Ac69-like protein [Bombyx mandarina nucleopolyhedrovirus]
Length = 262
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 64/190 (33%), Gaps = 12/190 (6%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R R KLL+I++K + + +DL PG ++ + + + + +
Sbjct: 36 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 95
Query: 108 PI-----LGVKFFKFDFLDLDSWEFIRQA-----IGGNPDLVLSDMAYPTIGHRKIDHLR 157
D ++ G DLVL+D + G
Sbjct: 96 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNGRENEQERL 155
Query: 158 TMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAES 215
L T L L GG+ ++K F I L HF+K + KP +SR +
Sbjct: 156 NFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNRFVNHFEKWVLYKPPSSRPAN 215
Query: 216 VEMFLLAKGF 225
E +L+
Sbjct: 216 SERYLICFNK 225
>gi|327275748|ref|XP_003222634.1| PREDICTED: putative rRNA methyltransferase 3-like [Anolis
carolinensis]
Length = 771
Score = 86.4 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 51/110 (46%)
Query: 116 KFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI 175
L + ++ D+VL+D A D +L +A A + L+
Sbjct: 1 MDPNLKKKNIALRKELKTWKVDVVLNDGAPNVGARWFPDAFSQANLTLSALKLACDFLSK 60
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
GG F+ K F+ +L + ++ F+KV KP ASR ES E+F++ +G+
Sbjct: 61 GGWFITKVFRSRDYQPLLWIFQQLFRKVQATKPQASRNESAEIFVVCQGY 110
>gi|9627812|ref|NP_054099.1| putative methyl transferase [Autographa californica
nucleopolyhedrovirus]
gi|114680123|ref|YP_758536.1| methyltransferase [Plutella xylostella multiple
nucleopolyhedrovirus]
gi|1175093|sp|P41469|Y069_NPVAC RecName: Full=Uncharacterized 30.4 kDa protein in LEF3-IAP2
intergenic region
gi|559138|gb|AAA66699.1| putative methyl transferase [Autographa californica
nucleopolyhedrovirus]
gi|91982187|gb|ABE68455.1| methyltransferase [Plutella xylostella multiple
nucleopolyhedrovirus]
Length = 262
Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 62/190 (32%), Gaps = 12/190 (6%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID----- 102
R R KL +I++K + + +DL PG ++ + + +
Sbjct: 36 RPRCWRKLSEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 95
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQA-----IGGNPDLVLSDMAYPTIGHRKIDHLR 157
+ D ++ G DLVL+D + G
Sbjct: 96 KPTVRKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNGRENEQERL 155
Query: 158 TMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAES 215
L T L L GG+ ++K F I L HF+K + KP +SR +
Sbjct: 156 NFDLIMCETQLILICLRPGGNCVLKVFDAFEHETIQMLNKFVNHFEKWVLYKPPSSRPAN 215
Query: 216 VEMFLLAKGF 225
E +L+
Sbjct: 216 SERYLICFNK 225
>gi|9630876|ref|NP_047473.1| AcMNPV orf69 [Bombyx mori NPV]
gi|3745895|gb|AAC63742.1| AcMNPV orf69 [Bombyx mori NPV]
Length = 262
Score = 86.0 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 64/190 (33%), Gaps = 12/190 (6%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R R KLL+I++K + + +DL PG ++ + + + + +
Sbjct: 36 RPRCWRKLLEIDKKFHVCRHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNSVCVY 95
Query: 108 PI-----LGVKFFKFDFLDLDSWEFIRQA-----IGGNPDLVLSDMAYPTIGHRKIDHLR 157
D ++ G DLVL+D + G
Sbjct: 96 KPTVCKRKNFTTITGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNGRENEQERL 155
Query: 158 TMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAES 215
L T L L GG+ ++K F I L HF+K + KP +SR +
Sbjct: 156 NFDLIMCETQLILICLRPGGNCVLKVFDAFEHKTIQMLNKFVNHFEKWVLYKPPSSRPAN 215
Query: 216 VEMFLLAKGF 225
E +L+
Sbjct: 216 SERYLICFNK 225
>gi|71422720|ref|XP_812230.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876988|gb|EAN90379.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 357
Score = 84.8 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 47/239 (19%), Positives = 85/239 (35%), Gaps = 52/239 (21%)
Query: 39 VQRAQLEG--------WRARSAYKLLQINEKHQIL-QSNRRIVDLGSSPGSWSQVAARIT 89
+ A+ EG +R RSA+KLL+++ + + R +VDL ++PG ++QVA +
Sbjct: 61 YKHARREGKESVQRRMYRCRSAHKLLELDAAYHLFAWPCRTVVDLAAAPGGFAQVALQRM 120
Query: 90 G-------SNANNTRVVAIDILDMEPILGVKFFKFDFLDLD-----------SWEFIRQA 131
+ V+A D +EP+ G+ K D D + + +
Sbjct: 121 ACTSLPTSTEDVRPVVIAFDQRPIEPMEGLFSVKCDVNDHPRVMAYTARLLRTLQGENET 180
Query: 132 IGGNPDLVLSDMAYPTI-----------------------GHRKIDHLRTMSLCEAATF- 167
+ +VL D + T + A
Sbjct: 181 QRKDVHVVLHDGVSVVKGQSLFSVTYGQNQMALGALRLAGSFFALHTHHTSARRLACGDV 240
Query: 168 -FALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ F+ K N +L + +F V KP + ES+E +++A+GF
Sbjct: 241 KHHDDNNRSTRKFITKAMHSSHFNTLLEACQLYFYDVHVHKPSECKPESLETYIVARGF 299
>gi|209978826|ref|YP_002300569.1| hypothetical protein [Adoxophyes orana nucleopolyhedrovirus]
gi|192758808|gb|ACF05343.1| hypothetical protein [Adoxophyes orana nucleopolyhedrovirus]
Length = 275
Score = 84.8 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 8/185 (4%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R R +KL +I++K+ + QS +DL PG +++ + +
Sbjct: 36 RDRCYHKLHEIDKKYFVCQSVNTFIDLCGGPGQFAKYIFDSNFECRGYGVTLNNALNYQF 95
Query: 108 PILGVKFFKFD------FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
F +E DL+++D A G+ +
Sbjct: 96 KNRNFTRIYGHDNSGNIFDTSVQFELQMLCENNAVDLIVADGAVDVSGNENHQETINFLI 155
Query: 162 CEAATFFALEMLNIGGDFLVKTFQGGTTND--ILCLLKKHFQKVIHVKPVASRAESVEMF 219
L++L + G+ ++K F +L HF+ KP +SRA + E +
Sbjct: 156 ISEECKIILKLLKVNGNCVIKVFDTFNDETVCLLENFATHFENSYIFKPSSSRAANSERY 215
Query: 220 LLAKG 224
L+ K
Sbjct: 216 LVCKN 220
>gi|307192784|gb|EFN75874.1| Uncharacterized protein KIAA0082-like protein [Harpegnathos
saltator]
Length = 855
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 75/239 (31%), Gaps = 37/239 (15%)
Query: 16 KVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL--------QS 67
KV+ R + S + + G+ R+A K+ IN+ +
Sbjct: 229 KVEMRKARTRSNA----------YETIRTAGFLNRAAVKMANINKACNFMFTDGVDMKDE 278
Query: 68 NRRIVDLGSSPGSWSQVAARITGSNAN-----------------NTRVVAIDILDMEPIL 110
D+ + PG +S+ +A
Sbjct: 279 LLYFADVCAGPGGFSEYILSRKKWHAKGFGFTLKNENDFKLDEFFAGPCETFHPFYGSKD 338
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
+ ++ G ++SD + G I + + L AL
Sbjct: 339 NGDVYDPKNQIEFRDLIMKHTYGKGVHFMMSDGGFSVEGKENIQEILSKRLYLCQCLIAL 398
Query: 171 EMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ GG F+ K F + ++ L+ + F V KP +SR + E +L+ KG ++
Sbjct: 399 MIVRTGGHFVTKLFDLFTPFSVGLVYLMYRCFDSVCIFKPNSSRPANSERYLICKGKKE 457
>gi|238502002|ref|XP_002382235.1| ftsj, putative [Aspergillus flavus NRRL3357]
gi|220692472|gb|EED48819.1| ftsj, putative [Aspergillus flavus NRRL3357]
Length = 206
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
D+VLSDM T G DH +M LC AA F+ E+L GG F+ K +QG D+ L
Sbjct: 105 DVVLSDMMMNTSGMSFRDHAGSMDLCRAALQFSFEVLKAGGHFVCKFYQGAEDKDLEKQL 164
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
K+ FQKV +KP +SR ES E + + ++
Sbjct: 165 KRLFQKVHRLKPESSRNESKEAYFIGLARKQ 195
>gi|29567139|ref|NP_818701.1| hypothetical protein AhnVgp054 [Adoxophyes honmai NPV]
gi|29467915|dbj|BAC67305.1| hypothetical protein [Adoxophyes honmai NPV]
Length = 275
Score = 84.4 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 70/185 (37%), Gaps = 8/185 (4%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA------ARITGSNANNTRVVAI 101
R R +KL +I++K+ + Q + +DL PG +++ R G NN
Sbjct: 36 RDRCYHKLHEIDKKYFVCQHVKTFIDLCGGPGQFAKYIFDSNFECRGYGVTLNNALRYQF 95
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
+ I G F +E DL+++D A G+ +
Sbjct: 96 KNRNFTKIYGHDNSGNIFDTSVQFELQMLCENNTVDLIVADGAVDVSGNENHQETINFLI 155
Query: 162 CEAATFFALEMLNIGGDFLVKTFQGGTTND--ILCLLKKHFQKVIHVKPVASRAESVEMF 219
L++L + G+ +VK F +L HF+ KP +SRA + E +
Sbjct: 156 INEECKIILKLLKVNGNCVVKVFDTFNDETVCLLERFVTHFENSYIFKPSSSRAANSERY 215
Query: 220 LLAKG 224
L+ K
Sbjct: 216 LVCKN 220
>gi|156402431|ref|XP_001639594.1| predicted protein [Nematostella vectensis]
gi|156226723|gb|EDO47531.1| predicted protein [Nematostella vectensis]
Length = 529
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 43/99 (43%)
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
++ D VL+D A D L +A A E L GG F+ K F+
Sbjct: 20 LKKELKTWQADCVLNDGAPNVGTAWVQDAFTQAELTLSALKLACENLKEGGWFITKVFRS 79
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+L + ++ F+ V KP ASR ES E+F++ +
Sbjct: 80 KDYQPLLWVFQQLFKSVHSTKPQASRNESAEIFVVCQSL 118
>gi|213620974|ref|ZP_03373757.1| 23S rRNA methyltransferase J [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 79
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA 213
D R M L E A ++L GG F+VK FQG ++ L ++ F KV KP +SRA
Sbjct: 7 DIPRAMYLVELALDMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRA 66
Query: 214 ESVEMFLLAKGFR 226
S E++++A G +
Sbjct: 67 RSREVYIVATGRK 79
>gi|62914003|gb|AAH00131.2| FTSJ3 protein [Homo sapiens]
Length = 734
Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKK 198
VL+D A D L A A + L GG F+ K F+ +L + ++
Sbjct: 1 VLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQ 60
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGF 225
F++V KP ASR ES E+F++ +GF
Sbjct: 61 LFRRVQATKPQASRHESAEIFVVCQGF 87
>gi|307184308|gb|EFN70766.1| Uncharacterized protein KIAA0082-like protein [Camponotus
floridanus]
Length = 775
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 28/209 (13%)
Query: 46 GWRARSAYKLLQINEKHQI-------LQSNRRI--VDLGSSPGSWSQVAARITGSNANNT 96
+ R+A K+ IN+ L + + D+ + PG +S+ +A
Sbjct: 175 NFLNRAAVKMANINKACNFMFTDPKDLHPDDLLYFADVCAGPGGFSEYILSRKKWHAKGF 234
Query: 97 RVVAID----ILDMEPILGVKFFKF--------DFLDLDSWEF-----IRQAIGGNPDLV 139
+ LD + F D D + E ++ G +
Sbjct: 235 GFTLKNENDFTLDEFFAGPCETFHPFYGSKENGDVFDPQNQEEFRSLIMKHTYGKGVHFM 294
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLK 197
+SD + G I + + L AL ++ GG F+ K F + ++ L+
Sbjct: 295 MSDGGFSVEGQENIQEILSKQLYLCQCLVALMIVRPGGHFVTKLFDLFTPFSIGLVYLMY 354
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ F+ + KP +SR + E +L+ K +
Sbjct: 355 RCFENICIFKPNSSRPANSERYLICKRKK 383
>gi|290996676|ref|XP_002680908.1| predicted protein [Naegleria gruberi]
gi|284094530|gb|EFC48164.1| predicted protein [Naegleria gruberi]
Length = 575
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 30/211 (14%)
Query: 47 WRARSAYKLLQINEKHQI--------LQSNRRIVDLGSSPGSWSQVAARI---------- 88
++ R+A KL I+ + D+ + PG +++
Sbjct: 236 FQNRAAIKLANIDRISDLTTLVRLPEENGILYFADICAGPGGFTEYLYYRFKTDKAKGWG 295
Query: 89 --TGSNANNTRVVAIDILDMEPILGVKFFKFDFL----DLDSWEFIRQAIGGNPDL---- 138
+ ++ ++ + V + + + + + G
Sbjct: 296 FTLKNKKDDWKLNRFNPESPHDNFEVNYGEDGTGDITKNENIRALSKAIDQGTNGRGVAL 355
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLL 196
V +D + G T L L + GG F+ K F T + ++ +L
Sbjct: 356 VTADGGFSVHGVENSQEYLTHQLVLCQILTGLMITRRGGSFVCKLFDLNTWFSASLMYIL 415
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++++KV+ VKP++SR + E +++ KG RK
Sbjct: 416 YQNYEKVMIVKPLSSRPANSERYVICKGLRK 446
>gi|322510557|gb|ADX05871.1| putative FtsJ methyltransferase [Organic Lake phycodnavirus 1]
Length = 377
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 71/198 (35%), Gaps = 20/198 (10%)
Query: 49 ARSAYKLLQINEKHQILQSNRRI-VDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
+RS +K+++I + N + L PG + + + + + + + +
Sbjct: 82 SRSYFKMVEILHHYSFHFPNEMVSFHLAEGPGGFIEALSNYRKNEKDIYFGMTLMDNKED 141
Query: 108 PILGVKFFKFDFLDLDSW-----------------EFIRQAIGGNPDLVLSDMAYPTIGH 150
+ L + ++I + D V D
Sbjct: 142 VPKWKNNDIYLNLHKNIILEYGQDKTGNLYSKKNLQYIYSNYKHSVDFVTGDGGIDYSND 201
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKP 208
+++L A +A+ + GG F++K F + ++L LL ++ + +KP
Sbjct: 202 FNKQEESSLNLIFAQILYAMCIQKKGGSFVLKLFDTFTSLSVELLFLLNYLYEDIYIIKP 261
Query: 209 VASRAESVEMFLLAKGFR 226
+ SR + E +++ FR
Sbjct: 262 LTSRPANSEKYIVCIHFR 279
>gi|23577881|ref|NP_703059.1| hypothetical protein [Rachiplusia ou MNPV]
gi|23476526|gb|AAN28073.1| unknown [Rachiplusia ou MNPV]
Length = 262
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 61/188 (32%), Gaps = 12/188 (6%)
Query: 50 RSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID-----IL 104
R KL +I++K + + +DL PG ++ + + +
Sbjct: 38 RCWRKLSEIDKKFHVCRHVNTFLDLCGGPGEFANYTMSLNPFCKAYGVTLTNNSVCVYKP 97
Query: 105 DMEPILGVKFFKFDFLDLDSWEFIRQA-----IGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
+ D ++ G DLVL+D + G
Sbjct: 98 TVRKRKNFTTVTGPDKSGDVFDKNVVFEISIKCGNACDLVLADGSVDVNGRENEQERLNF 157
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAESVE 217
L T L L GG+ ++K F I L HF+K I KP +SR + E
Sbjct: 158 DLIMCETQLILICLRPGGNCVLKVFDAFEHETIQMLNKFVNHFEKWILYKPPSSRPANSE 217
Query: 218 MFLLAKGF 225
+L+
Sbjct: 218 RYLICFNK 225
>gi|322511153|gb|ADX06466.1| hypothetical protein 162276034 [Organic Lake phycodnavirus 2]
Length = 376
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 71/198 (35%), Gaps = 20/198 (10%)
Query: 49 ARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAAR-ITGSNANNTRVVAIDILDM 106
+RS +K+++I + R L PG + + + + ++ +
Sbjct: 82 SRSYFKMIEILNHYSFSFPDTMRSFHLAEGPGGFIEALSNYRNNPKDVYYGMTLMEEKND 141
Query: 107 EPILGVKFFKFDF----------------LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
P D + E++ + D V D +
Sbjct: 142 IPKWKKNEIYLDIHKHISLEYGGDNTGNLYHKTNLEYVYNKYKHSIDFVTGDGGFDYSID 201
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKP 208
+++L + FA+ + GG F++K F + +++ LL ++++ +KP
Sbjct: 202 FNKQEEHSLNLIFSQICFAMCVQKKGGSFVLKLFDTFTSLSVEMIYLLNYLYEEIYIIKP 261
Query: 209 VASRAESVEMFLLAKGFR 226
+ SR + E +++ FR
Sbjct: 262 LTSRPANSEKYIICIRFR 279
>gi|327348578|gb|EGE77435.1| tRNA (Uridine-2'-O-)-methyltransferase TRM7 [Ajellomyces
dermatitidis ATCC 18188]
Length = 396
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 60/150 (40%), Gaps = 23/150 (15%)
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF-----------------------IRQ 130
N ++VAID+ M P+ G+ K D +
Sbjct: 135 KNVKIVAIDLQPMTPLEGITTLKADITHPSTIPLLLKALDPDDYTHDTSSTNNTTTKTPH 194
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
DLVLSD A G +D L AA A+ +L GG F+ K F+G +
Sbjct: 195 HHPHPVDLVLSDGAPDVTGLHDLDIYIQSQLLYAALNLAIGVLRPGGKFVAKIFRGRDVD 254
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFL 220
I LK F+KV KP +SRA S+E F+
Sbjct: 255 LIYAQLKTVFEKVSVAKPRSSRASSLEAFV 284
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 10/78 (12%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSP 78
SS+D D Y + A+ + WRARSA+KL+QI+E+ + S R+VDL ++P
Sbjct: 3 KSSKD-----KRDAYYRLAKEQNWRARSAFKLIQIDEQFDLFAHSDPDSVTRVVDLCAAP 57
Query: 79 GSWSQVAARITGSNANNT 96
GSWSQV +R+ +
Sbjct: 58 GSWSQVLSRVLIKGESFG 75
>gi|15617533|ref|NP_258333.1| hypothetical protein [Spodoptera litura NPV]
gi|15553269|gb|AAL01747.1|AF325155_59 unknown [Spodoptera litura NPV]
Length = 313
Score = 82.9 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 71/200 (35%), Gaps = 25/200 (12%)
Query: 50 RSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN----------------- 92
R YKL QIN+K ++ R +DL PG + + + +
Sbjct: 57 RCFYKLKQINDKFKVCDDIRTYLDLCGGPGQFVRYLNAVNDESVLGFGVTLRNHLDYDKS 116
Query: 93 ------ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
TR+ + D + I GG D V +D A+
Sbjct: 117 IVKRFADRFTRIYGDETKSSSGDGDGGNGSGDIMSESVVRQIVSKCGGRCDFVCADGAFD 176
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVI 204
G T+ L L L++GG+ +VK F T ++L K+F++
Sbjct: 177 VTGDENRQEFLTLPLIRRECELILSCLSVGGNCVVKVFDTFESDTRNVLGDFVKNFEEYH 236
Query: 205 HVKPVASRAESVEMFLLAKG 224
KP +SR + E +L+ K
Sbjct: 237 VFKPESSRVCNSERYLVCKN 256
>gi|326928915|ref|XP_003210618.1| PREDICTED: putative ribosomal RNA methyltransferase 2-like, partial
[Meleagris gallopavo]
Length = 147
Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKF-DFLDLDSWEFIRQA-IGGNPDLVLSDMAYPTI 148
A V+ +D+L + P+ G F D D + I+ D++LSDMA
Sbjct: 8 PAAPTGFVIGVDLLRISPLEGAVFLSQVDITDPRTQRAIQNLLPAEKVDVILSDMAPNAT 67
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
G +++DH + + LC + +L G L K + G + + LK+ FQ V +KP
Sbjct: 68 GIKELDHQKLIGLCLGLVNLSESILKPKGTILCKFWDGHESRVLQNKLKEQFQNVRTIKP 127
Query: 209 VASRAESVEMFLLAKGFR 226
+SR +S E + LA+ ++
Sbjct: 128 QSSRKDSSESYYLARLYK 145
>gi|289614367|emb|CBI58877.1| unnamed protein product [Sordaria macrospora]
Length = 522
Score = 82.5 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS--NRRIV 72
++ R S+ W R +D Y + A+ G ++R+A+KLL+IN+K+++ + + +V
Sbjct: 50 TTLQTRPSSSSTSRWKTRQFSDRYAREARTAGLKSRAAFKLLEINKKYRLFRPSSGQIVV 109
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
DLG +PGSWSQVA +T + +VV IDI+ +P GV + +FL
Sbjct: 110 DLGFAPGSWSQVALDLTKPD---GKVVGIDIIPAQPPRGVSAIQGNFLSEGVR 159
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH +M LC AA FA + L GG F+ K +QG + +L+K F KV
Sbjct: 430 MMNTSGISFKDHAGSMDLCYAALSFANDTLKPGGHFVCKFYQGSEDKKLEDMLRKLFGKV 489
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
KP +SR+ES E + +A R+
Sbjct: 490 FRDKPDSSRSESKEAYFVALNRRR 513
>gi|84043514|ref|XP_951547.1| ribosomal RNA methyltransferase [Trypanosoma brucei TREU927]
gi|33348376|gb|AAQ15702.1| ribosomal RNA methyltransferase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62358698|gb|AAX79154.1| ribosomal RNA methyltransferase, putative [Trypanosoma brucei]
Length = 432
Score = 81.7 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 24/151 (15%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR---IVDLGSSPGSWSQVAAR 87
++ D Y ++A+ EG+RARSAYKLLQ++E+ IL+ +VDL ++PGSWSQV +
Sbjct: 5 SKDKRDIYYRKAKEEGYRARSAYKLLQLHEEFGILRREEIRTGVVDLCAAPGSWSQVLSN 64
Query: 88 -------------------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
I + R+VA+D+ +M PI GV+ + D + I
Sbjct: 65 HLCGSQPGSAAEACEGDEAINSEASQRPRIVAVDLQEMMPIDGVQLLQGDITSEWTAREI 124
Query: 129 RQAIGGNPDLV--LSDMAYPTIGHRKIDHLR 157
+ + G+ V SD + D
Sbjct: 125 IRLLNGDSSSVPECSDATALSTAGAINDFNN 155
Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLV+ D A G ++D L AA +L GG F+ K F+G T ++
Sbjct: 222 DLVVCDGAPDVTGMHELDEYLQHHLLLAALNITTFVLRRGGTFVTKMFRGPNTPFLVAKA 281
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ F++V KP +SR S+E F++ + +
Sbjct: 282 EVFFRQVTIAKPKSSRNASMEAFMVCQNY 310
>gi|261326415|emb|CBH09375.1| ribosomal RNA methyltransferase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 432
Score = 81.7 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 24/150 (16%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRR---IVDLGSSPGSWSQVAAR 87
++ D Y ++A+ EG+RARSAYKLLQ++E+ IL+ +VDL ++PGSWSQV +
Sbjct: 5 SKDKRDIYYRKAKEEGYRARSAYKLLQLHEEFGILRREEIRTGVVDLCAAPGSWSQVLSN 64
Query: 88 -------------------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
I + R+VA+D+ +M PI GV+ + D + I
Sbjct: 65 HLCGSQPGSAAEACEGDEAINSEASQRPRIVAVDLQEMMPIDGVQLLQGDITSEWTAREI 124
Query: 129 RQAIGGNPDLV--LSDMAYPTIGHRKIDHL 156
+ + G+ V SD + D
Sbjct: 125 IRLLNGDSSSVPECSDATALSTAGAINDFN 154
Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLL 196
DLV+ D A G ++D L AA +L GG F+ K F+G T ++
Sbjct: 222 DLVVCDGAPDVTGMHELDEYLQHHLLLAALNITTFVLRRGGTFVTKMFRGPNTPFLVAKA 281
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ F++V KP +SR S+E F++ + +
Sbjct: 282 EVFFRQVTIAKPKSSRNASMEAFMVCQNY 310
>gi|325180302|emb|CCA14705.1| PREDICTED: FtsJ methyltransferase domain containing 2like putative
[Albugo laibachii Nc14]
Length = 653
Score = 81.7 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 87/224 (38%), Gaps = 30/224 (13%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKH-------QILQSNRRIV---DLGSSPGS 80
R +PY + + + ++ R+A KL +++ + Q+L ++ D+ + PG
Sbjct: 134 ARSRANPYEKISNVHLFQNRAALKLAELDAQFSPKLSDPQLLPEENNVLFFADICAGPGG 193
Query: 81 WSQVAA-----RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN 135
+++ R G V ++ P + F+ D+ LD + Q +
Sbjct: 194 FTEYLYWQRKWRCKGWGFTLKGVCDFELEKFNPCIAADTFEIDYGVLDDGDIYAQENILS 253
Query: 136 PDL-------------VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
V +D + T G T L AL +L GG F+ K
Sbjct: 254 FQKRVLASTKGRGVALVTADGGFSTDGDWNRQEFLTKRLVLCECITALCVLRQGGTFVCK 313
Query: 183 TFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
F T +++ ++ F++V KP+ SR + E FL+ +G
Sbjct: 314 FFDTFQDFTIELIYIMTLVFEEVSITKPIQSRPANSERFLVCRG 357
>gi|119964587|ref|YP_950783.1| Mv-ORF53 peptide [Maruca vitrata MNPV]
gi|119514430|gb|ABL76005.1| Mv-ORF53 peptide [Maruca vitrata MNPV]
Length = 262
Score = 81.3 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 12/187 (6%)
Query: 50 RSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID-----IL 104
R KL +I++K + + +DL PG ++ + + +
Sbjct: 38 RCWRKLSEIDKKFNVCKHVDTFLDLCGGPGEFANYTMSLNPLCKAYGVTLTNNLTCVYKP 97
Query: 105 DMEPILGVKFFKFDFLDLDSWEFIRQA-----IGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
+ D ++ G DLVL+D + G
Sbjct: 98 TIYKRKNFATITGPDKSGDVFDKNVIFEISVKCGNTCDLVLADGSVDVNGRENEQERLNF 157
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVE 217
L T L L GG+ ++K F T +L HF+K + KP +SR + E
Sbjct: 158 DLIMCETQIILICLRTGGNCVLKVFDAFQRETIQMLNKFINHFEKWVLYKPPSSRPANSE 217
Query: 218 MFLLAKG 224
+L+
Sbjct: 218 RYLICFN 224
>gi|320169116|gb|EFW46015.1| ribosomal RNA large subunit methyltransferase J [Capsaspora
owczarzaki ATCC 30864]
Length = 317
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
+S + S AA S + V+A+DI ME + G +
Sbjct: 169 ATNASSIATSNGAANAPPSPPLSPLVLAVDIEPMERVPGAIVLPQA-------DMTAILG 221
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
D+VLSDMA P G+ + HL+ ++L EAA FA L I G F+ K+F G +
Sbjct: 222 TRLVDVVLSDMAPPASGNAGVTHLQCVNLIEAALRFATRFLRIDGWFVCKSFHGTEDQLL 281
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L++HF++V KP A+R ES E + + +GF
Sbjct: 282 TTTLRRHFREVHFCKPPATRTESGEFYYVCEGF 314
Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 26/95 (27%)
Query: 24 GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQIL------------------ 65
SS W R +DPYV +A +G+R RSAYKL Q+++K L
Sbjct: 32 ASSSRWTKRQQSDPYVHQALEDGYRCRSAYKLKQLDDKFHFLRTPAGQAAASKRATASTA 91
Query: 66 --------QSNRRIVDLGSSPGSWSQVAARITGSN 92
+S ++D G+ PG W+QVA G +
Sbjct: 92 TAAQPVVVRSGLVVIDCGARPGGWTQVAVERVGKD 126
>gi|226287509|gb|EEH43022.1| ribosomal RNA methyltransferase MRM2 [Paracoccidioides brasiliensis
Pb18]
Length = 622
Score = 81.0 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
SS+ W R D Y + A ++G ++R+A+KLLQIN+KH+I + + +VDL
Sbjct: 413 RHSSSKRWQARQAKDRYSREAIVKGLKSRAAFKLLQINDKHKIFKLGQSVVDL------- 465
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
VA +T N RVV +DI+ +P GV + +FL ++++ + +
Sbjct: 466 --VAVELTQPN---GRVVGVDIIPAQPPKGVSTIQGNFLSPQVQAYVQEFLRNPNRGRVQ 520
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAA 165
+ + + + E+
Sbjct: 521 RLNHFENTDPDSQSITGYQIEESE 544
>gi|323446286|gb|EGB02505.1| hypothetical protein AURANDRAFT_35192 [Aureococcus anophagefferens]
Length = 156
Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR-----RIVDLGSSPGSWSQVA 85
+R D Y + A+ +RAR+A+KLLQ++ IL + R+ DL ++PG WSQV
Sbjct: 5 SRDKRDIYYRLAKTSNYRARAAFKLLQLDATLGILSTATTHDRLRVADLCAAPGGWSQVV 64
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG----NPDLVLS 141
A RVVA+D+ + PI GV+ D + + A+GG +VL
Sbjct: 65 AERRP----GARVVAVDLKPIAPIAGVEMVLGDITAAATAREVVDALGGGADARRGVVLC 120
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFA 169
D A IG +D L A A
Sbjct: 121 DGAPDVIGLNDVDEHLQNELVRKAWSMA 148
>gi|322800047|gb|EFZ21153.1| hypothetical protein SINV_03614 [Solenopsis invicta]
Length = 830
Score = 80.6 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 67/208 (32%), Gaps = 28/208 (13%)
Query: 47 WRARSAYKLLQINE--KHQILQSNRR-------IVDLGSSPGSWSQVAARITGSNAN--- 94
+ R+A K+ I+ D+ + PG +S+ +A
Sbjct: 221 FLNRAAVKMANIDRACDFMFTDPKNMDANELLFFADVCAGPGGFSEYVLSRKKWHAKGFG 280
Query: 95 -NTRVVAIDILDMEPILGVKFFKF--------DFLDLDSWEFI-----RQAIGGNPDLVL 140
+ LD + F D + + E + ++
Sbjct: 281 FTLKSSNDFTLDEFFAGPCETFHPFYGPKGDGDVYNPQNQEAFQALIKKHTDNKGVHFMM 340
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKK 198
SD + G I + + L AL ++ G F+ K F + ++ L+ K
Sbjct: 341 SDGGFSVEGQENIQEILSKQLYLCQCLVALMIVRPDGHFVTKLFDLFTPFSVGLIYLMYK 400
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F + KP +SR + E +L+ K R
Sbjct: 401 CFDSISIFKPNSSRPANSERYLICKRKR 428
>gi|290992761|ref|XP_002679002.1| predicted protein [Naegleria gruberi]
gi|284092617|gb|EFC46258.1| predicted protein [Naegleria gruberi]
Length = 570
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 76/227 (33%), Gaps = 34/227 (14%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQI-----------LQSNRRIVDLGSSPG 79
R ++PY + + ++ R+A KL I+ + D+ + PG
Sbjct: 150 ARLRSNPYEKIGKSI-FQNRAAVKLANIDLVTDLTSETSLPRLVEENGVLYFADICAGPG 208
Query: 80 SWSQVAARITGSNANNTRVVAID----------------ILDMEPILGVKFFKFDFLDLD 123
+++ ++ + + E GV + +
Sbjct: 209 GFTEYLYYRYKTSKAKGWGFTLKNDKDDWKLEKFNNESPCSNFELNYGVDGTGDITKNEN 268
Query: 124 SWEFIRQAIGGNPDL----VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
G + V +D + G T L AL L GG F
Sbjct: 269 MLCLDDAVNRGTNNRGLALVTADGGFCVDGVENSQEYLTQQLVLCQFLTALLTLRKGGCF 328
Query: 180 LVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+ K F T + ++ ++ ++F+KV KP +SR + E +++ KG
Sbjct: 329 VCKLFDLNTWFSASLIYVMYQYFEKVTIFKPFSSRPANSERYIVCKG 375
>gi|310799165|gb|EFQ34058.1| FtsJ-like methyltransferase [Glomerella graminicola M1.001]
Length = 328
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
S+ W R D + + A+++G ++R+A+KLL+++ K+++ + + +VDL
Sbjct: 40 RASSSNSRWKMRQGRDMFAREAKVQGLKSRAAFKLLEMDAKYKLFRKGQTVVDL------ 93
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
VA T N +++ IDI+ +P GV + +FL D + +++
Sbjct: 94 ---VAVERTKPN---GQILGIDIIPAQPPKGVSTIQGNFLSPDVQDMVKEY 138
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH +M LC A FA + L GG F+ K +QG + LK F KV
Sbjct: 238 MMNTSGMAFRDHAGSMDLCGVALQFANDTLRNGGHFVCKFYQGSEDREFEKKLKTLFAKV 297
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
KP +SR++S E + +A +
Sbjct: 298 FREKPESSRSDSKEAYFVALRRK 320
>gi|320580692|gb|EFW94914.1| Ribosomal RNA methyltransferase MRM2 [Pichia angusta DL-1]
Length = 315
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNR--RIVDLGSSP 78
GSS W+ R D Y + A+ +++R+A+KLLQI+EK I R I+DLG++P
Sbjct: 19 KKSGSSHRWIQRQRTDLYTRDAKHYDYKSRAAFKLLQIDEKFGIFSQERISNILDLGAAP 78
Query: 79 GSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
G+WSQVA +N ++ +D+L +P G + + L + E I++
Sbjct: 79 GAWSQVALERCRKGSN---ILGVDLLVYQPPNGSSSMQANILSKKTHENIKEHFK 130
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 60/176 (34%), Gaps = 6/176 (3%)
Query: 53 YKLLQINEKHQILQSNRRI---VDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPI 109
+K++++ + Q Q I S + ++ ++ E
Sbjct: 129 FKVVEMEKLKQKFQPIEVISNQTAFEIQATSVIDSESELSKLEKTEQEHSLQNVYYDELY 188
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
V D N + T G DH +M LC+AA +
Sbjct: 189 RPVDVILSDMYVPFPQIGGFANQTTNMPYI---RMANTSGLSFRDHAMSMDLCDAALITS 245
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+++L GG+ + K F G + L F+KVI KP A R ES E + +
Sbjct: 246 IDLLKKGGNSVFKFFTGKDDKFLEKRLTHVFRKVIRFKPKACRPESKECYFVCLDK 301
>gi|332031624|gb|EGI71096.1| S-adenosyl-L-methionine-dependent methyltransferase ftsjd2
[Acromyrmex echinatior]
Length = 764
Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/210 (18%), Positives = 70/210 (33%), Gaps = 28/210 (13%)
Query: 46 GWRARSAYKLLQINE--KHQILQSNRR-------IVDLGSSPGSWSQVAARITGSNANNT 96
+ R+A K+ I+ D+ + PG +S+ +A
Sbjct: 139 NFLNRAAVKMANIDRACDFMFTNPKNVDPNELLYFADVCAGPGGFSEYILSKKKWHAKGF 198
Query: 97 RVVAID----ILDMEPILGVKFFKF--------DFLDLDSWEFIRQAIGGNP-----DLV 139
+ LD + F D D + R + G+ +
Sbjct: 199 GFTLKNENDFSLDDFFAGPCETFHPFYGSKGNGDVFDTQNQREFRSIVMGHTDGKGVHFM 258
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLK 197
+SD + G I + + L AL ++ GG F+ K F + ++ L+
Sbjct: 259 MSDGGFSVEGQENIQEILSKQLYLCQCLVALMIVRPGGHFVTKLFDLFTSFSVGLVYLMY 318
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
F+ + KP SR + E +L+ K +K
Sbjct: 319 HCFESISIFKPNTSRPANSERYLICKRKKK 348
>gi|297183084|gb|ADI19228.1| 23S rRNA methylase [uncultured delta proteobacterium HF0200_14D13]
Length = 128
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
Q D++LSDMA T G R +D R+ +L + + + L GG+ LVK FQG
Sbjct: 29 EQLPPEPFDMILSDMAPRTSGVRSMDADRSYALNQQVLGLSGKHLKSGGNLLVKAFQGAP 88
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ ++ F++V KP +SR+ESVE+FLL G RK
Sbjct: 89 FEQLRKDFREVFEEVRICKPRSSRSESVEVFLL--GLRK 125
>gi|312379916|gb|EFR26060.1| hypothetical protein AND_08114 [Anopheles darlingi]
Length = 228
Score = 80.2 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 100 AIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGG---------NPDLVLSDMAYPTIGH 150
A ++GV + ++ + +F+RQ D VLSDMA G
Sbjct: 89 ASVGKPKGMVIGVDLLQIYLIEPSTLDFLRQETQDKLRATLGDRRLDCVLSDMAPNATGF 148
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVA 210
R +D +LC + FAL M + L+K + G + + +++ V VKP A
Sbjct: 149 RALDQENVTTLCYSVLRFALLMSSPKASLLMKIWDNGDVPKLEKSINEYYDSVKRVKPRA 208
Query: 211 SRAESVEMFLLAKGFR 226
SR +S E F+LA+GFR
Sbjct: 209 SRNDSSENFILARGFR 224
>gi|71033419|ref|XP_766351.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353308|gb|EAN34068.1| hypothetical protein TP01_0830 [Theileria parva]
Length = 373
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 79/207 (38%), Gaps = 45/207 (21%)
Query: 65 LQSNRRIVDLGSSPGSWSQVAARITGSNANNTR-------------------------VV 99
L + +VDL S+PGSWSQ+ +++ + + +V
Sbjct: 125 LGRIKNVVDLCSAPGSWSQLLSKMVHQDHRTLKNACRKLQNEREVCKNLVEYVNIKPVIV 184
Query: 100 AIDILDMEPILGVKFFKFDFLDLDSWE--------------------FIRQAIGGNPDLV 139
AIDI M PI GV F K D D + + + +G + L+
Sbjct: 185 AIDIQQMAPIDGVHFLKGDITDPEILQQVLQLFIENVSRNINEAYGGECNEKLGRSAQLI 244
Query: 140 LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH 199
D A G + D L ++A +L+ G F+ KTF I +
Sbjct: 245 TCDGAPDISGLHETDSFLQSYLIKSALSVCFSLLDPDGCFICKTFFSSENTPIFTQVSSF 304
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
F KP ASR+ S E F++A G++
Sbjct: 305 FDYCTIFKPSASRSSSFEHFIVAVGYK 331
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN-RRIVDLGSSPGSWSQVAARIT 89
+ D Y ++A+ EG+RARSAYKLLQI E IL L S
Sbjct: 5 TKENRDIYYRKAKEEGFRARSAYKLLQIFESFHILYPTLDEESALSILLNSSCSYCENTI 64
Query: 90 GSNANNTR 97
+ N +
Sbjct: 65 NKSGKNDK 72
>gi|149640714|ref|XP_001506926.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 764
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/221 (17%), Positives = 72/221 (32%), Gaps = 32/221 (14%)
Query: 37 PYVQRAQLEGWRARSAYKLLQINEKHQI-----LQSNR-RIVDLGSSPGSWSQVAARITG 90
P+V+++ ++ K +I + Q+ V L +PG++
Sbjct: 100 PHVKKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGELNSVHLCEAPGAFIASLNHYLK 159
Query: 91 SN---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN------------ 135
S+ + V E V D L D+
Sbjct: 160 SHHIPCDWNWVANTLNPYHEANDNVTMIMDDRLIADTLPRWYFGPENTGDVMTLKHLSGL 219
Query: 136 ---------PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
LV +D ++ G+ L AL +L GG ++K F
Sbjct: 220 QRFVGDMATVHLVTADGSFDCQGNPGEQEALVSPLHYCEVVTALMILGSGGSLVLKMFTL 279
Query: 187 GT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ ++L LL F++V KP S+A + E++++ F
Sbjct: 280 FEHCSVNLLYLLNCSFEEVHVFKPGTSKAGNSEVYVVCLNF 320
>gi|332263869|ref|XP_003280973.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1
isoform 1 [Nomascus leucogenys]
gi|332263871|ref|XP_003280974.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1
isoform 2 [Nomascus leucogenys]
gi|332263873|ref|XP_003280975.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1
isoform 3 [Nomascus leucogenys]
gi|332263875|ref|XP_003280976.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1
isoform 4 [Nomascus leucogenys]
gi|332263877|ref|XP_003280977.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1
isoform 5 [Nomascus leucogenys]
gi|332263879|ref|XP_003280978.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1
isoform 6 [Nomascus leucogenys]
gi|332263881|ref|XP_003280979.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1
isoform 7 [Nomascus leucogenys]
Length = 770
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 76/220 (34%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNTR-------------------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
R ++ D L + F + D+ + +F+
Sbjct: 162 RFPCRWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTGLQN 221
Query: 134 G-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYK 321
>gi|302409280|ref|XP_003002474.1| ribosomal RNA methyltransferase MRM2 [Verticillium albo-atrum
VaMs.102]
gi|261358507|gb|EEY20935.1| ribosomal RNA methyltransferase MRM2 [Verticillium albo-atrum
VaMs.102]
Length = 202
Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH+ +M LC AA FA + L GG F+ K +QG ++ L+K F KV
Sbjct: 106 MMNTSGVTFKDHVGSMDLCYAALQFASDTLKPGGHFVCKFYQGAEDKELEKQLRKLFAKV 165
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
KP +SR +S E + + +
Sbjct: 166 FRDKPESSRKDSKEGYFVGLNRK 188
>gi|164659960|ref|XP_001731104.1| hypothetical protein MGL_2103 [Malassezia globosa CBS 7966]
gi|159105002|gb|EDP43890.1| hypothetical protein MGL_2103 [Malassezia globosa CBS 7966]
Length = 172
Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 28 DWLNRHINDPYVQRAQLEG--WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA 85
+L+R +D +V+ + +G + +RSAYKL+Q++ K+ Q R +VDLG++PG WSQ
Sbjct: 28 KYLSRQRHDQFVRDRKADGTGYVSRSAYKLVQLSTKYPFFQPGRVVVDLGAAPGGWSQAV 87
Query: 86 ARITGSNANNTRVVAIDILD-MEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMA 144
+ RV A+D+L + + F + DF D + IG + D+VLSDM
Sbjct: 88 LQQCPK----ARVYALDLLPLQTSLPNLTFMRGDFRDTQVRTSLSSLIGQDVDVVLSDMM 143
Query: 145 YPTIGHRKIDHLRTMSLCEAAT 166
T G+ D ++ LC AA
Sbjct: 144 ANTSGNSIRDTQASLDLCMAAF 165
>gi|31981920|ref|NP_666327.2| ftsJ methyltransferase domain-containing protein 1 [Mus musculus]
gi|81875546|sp|Q8BWQ4|FTSJ1_MOUSE RecName: Full=FtsJ methyltransferase domain-containing protein 1
gi|26341044|dbj|BAC34184.1| unnamed protein product [Mus musculus]
gi|148679508|gb|EDL11455.1| cDNA sequence BC025546 [Mus musculus]
Length = 767
Score = 79.0 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQI-----LQSNR-RIVDLGSSPGSWSQVAARITGSN 92
V++A ++ K +I + QS R + L +PG++ S+
Sbjct: 102 VKKAVNAELCTQAWCKFQEILCSFPLIPQEAFQSGRLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNT-------------------RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
R++ D L + F + D+ + +++
Sbjct: 162 RFPCEWSWVANSLNPYHEANDNLRMITDDRLMANTLHCWYFGPDNTGDIMTLKYLTGLQD 221
Query: 134 -----GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FLSGMSPIHLVTADGSFDCQGNPGEQEALVSSLHYCEAVTALITLGDGGSFVLKMFTLFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSVNLMYLLNCSFDQVHVFKPATSKAGNSEVYVVCLRYK 321
>gi|70933062|ref|XP_737958.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56513783|emb|CAH75136.1| hypothetical protein PC000546.00.0 [Plasmodium chabaudi chabaudi]
Length = 92
Score = 79.0 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 1 MVKPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINE 60
M + + K+ N+ SS+ W+ R I D YV +A+ E +R+R+A+KL++++
Sbjct: 8 MFQSTYVRLYKEALPKIYNKKSSHSSK-WIQRQITDRYVLKAKNENYRSRAAFKLIELDN 66
Query: 61 KHQILQSNRRIVDLGSSPGSWSQVA 85
K+ L+ N+ I+D+GS PGSW QV
Sbjct: 67 KYLFLKKNKTILDIGSYPGSWCQVI 91
>gi|19344074|gb|AAH25546.1| FtsJ methyltransferase domain containing 1 [Mus musculus]
Length = 767
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQI-----LQSNR-RIVDLGSSPGSWSQVAARITGSN 92
V++A ++ K +I + QS R + L +PG++ S+
Sbjct: 102 VKKAVNTELCTQAWCKFQEILCSFPLIPQEAFQSGRLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNT-------------------RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
R++ D L + F + D+ + +++
Sbjct: 162 RFPCEWSWVANSLNPYHEANDNLRMITDDRLMANTLHCWYFGPDNTGDIMTLKYLTGLQD 221
Query: 134 -----GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FLSGMSPIHLVTADGSFDCQGNPGEQEALVSSLHYCEAVTALITLGDGGSFVLKMFTLFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSVNLMYLLNCSFDQVHVFKPATSKAGNSEVYVVCLRYK 321
>gi|189235701|ref|XP_967499.2| PREDICTED: similar to CG6379 CG6379-PA [Tribolium castaneum]
Length = 573
Score = 78.6 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 30/208 (14%)
Query: 49 ARSAYKLLQINEKHQILQSNRR-----------IVDLGSSPGSWSQVAARITGSNANNTR 97
R++ K+ I+ + +N D+ + PG +++
Sbjct: 243 NRASLKMANIDAATDFMFTNINHSHHEDSGPYYFADVCAGPGGFTEYILWRKKWMFKGFG 302
Query: 98 VVAIDILDME-----PILGVKFFKFDF------------LDLDSWEFIRQAIGGNPDLVL 140
+ D + V F + S + + + ++
Sbjct: 303 LTLRGDNDFKLTESLCASPVTFLPLYGASGDGNACSPENISDFSEKVLFETENKGVHFMM 362
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKK 198
+D + G+ I + + SL ALE+L G F+ K F T + +L L+
Sbjct: 363 ADGGFSVEGNENIQEILSKSLYICQCLIALEILRKHGHFVTKVFDIFTCFSVGLLYLIYH 422
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+KV +KP +SR + E +++ ++
Sbjct: 423 CFEKVCILKPNSSRPANSERYVICCNYK 450
>gi|296235394|ref|XP_002762910.1| PREDICTED: putative ribosomal RNA methyltransferase 1-like
[Callithrix jacchus]
Length = 243
Score = 78.6 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 36/79 (45%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
G +D L AA A +L GG F+ K F+G + L+ F V+
Sbjct: 12 VTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFSSVLCA 71
Query: 207 KPVASRAESVEMFLLAKGF 225
KP +SR S+E F + +G+
Sbjct: 72 KPRSSRNSSIEAFAVCQGY 90
>gi|17946316|gb|AAL49198.1| RE63452p [Drosophila melanogaster]
Length = 788
Score = 78.6 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 76/213 (35%), Gaps = 33/213 (15%)
Query: 47 WRARSAYKLLQINEKHQILQSNRR---------------IVDLGSSPGSWSQVAARIT-- 89
+ R+A K+ I+ + +N R D+ + PG +S+
Sbjct: 172 FLNRAAVKMANIDSMCNFMFTNPRDPAGQTLVAPDELLYFTDMCAGPGGFSEYVLYRKSW 231
Query: 90 -----------GSNANNTRVVAIDILDMEPILGVK---FFKFDFLDLDSWEFIRQAIGGN 135
++ + A + GVK + E+IR
Sbjct: 232 EAKGLGFTLRGANDFKLEKFFAASPESFDTFYGVKEDGNIFDESNQDSLNEYIRMHTPQG 291
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDIL 193
++D + G + I + + L AL++L G F+ K F + ++
Sbjct: 292 VHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILRPNGSFVCKVFDLFTPFSVGLV 351
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+ K FQ++ +KP +SR + E +L+ K R
Sbjct: 352 YLMYKCFQQIAIIKPNSSRPANSERYLVCKYKR 384
>gi|24639619|ref|NP_572148.2| CG6379 [Drosophila melanogaster]
gi|74872724|sp|Q9W4N2|MTR1_DROME RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1
gi|7290461|gb|AAF45915.1| CG6379 [Drosophila melanogaster]
Length = 788
Score = 78.6 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 76/213 (35%), Gaps = 33/213 (15%)
Query: 47 WRARSAYKLLQINEKHQILQSNRR---------------IVDLGSSPGSWSQVAARIT-- 89
+ R+A K+ I+ + +N R D+ + PG +S+
Sbjct: 172 FLNRAAVKMANIDSMCNFMFTNPRDPAGQTLVAPDELLYFTDMCAGPGGFSEYVLYRKSW 231
Query: 90 -----------GSNANNTRVVAIDILDMEPILGVK---FFKFDFLDLDSWEFIRQAIGGN 135
++ + A + GVK + E+IR
Sbjct: 232 EAKGFGFTLRGANDFKLEKFFAASPESFDTFYGVKEDGNIFDESNQDSLNEYIRMHTPQG 291
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDIL 193
++D + G + I + + L AL++L G F+ K F + ++
Sbjct: 292 VHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILRPNGSFVCKVFDLFTPFSVGLV 351
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+ K FQ++ +KP +SR + E +L+ K R
Sbjct: 352 YLMYKCFQQIAIIKPNSSRPANSERYLVCKYKR 384
>gi|270003399|gb|EEZ99846.1| hypothetical protein TcasGA2_TC002628 [Tribolium castaneum]
Length = 747
Score = 78.6 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 30/208 (14%)
Query: 49 ARSAYKLLQINEKHQILQSNRR-----------IVDLGSSPGSWSQVAARITGSNANNTR 97
R++ K+ I+ + +N D+ + PG +++
Sbjct: 226 NRASLKMANIDAATDFMFTNINHSHHEDSGPYYFADVCAGPGGFTEYILWRKKWMFKGFG 285
Query: 98 VVAIDILDME-----PILGVKFFKFDF------------LDLDSWEFIRQAIGGNPDLVL 140
+ D + V F + S + + + ++
Sbjct: 286 LTLRGDNDFKLTESLCASPVTFLPLYGASGDGNACSPENISDFSEKVLFETENKGVHFMM 345
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKK 198
+D + G+ I + + SL ALE+L G F+ K F T + +L L+
Sbjct: 346 ADGGFSVEGNENIQEILSKSLYICQCLIALEILRKHGHFVTKVFDIFTCFSVGLLYLIYH 405
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+KV +KP +SR + E +++ ++
Sbjct: 406 CFEKVCILKPNSSRPANSERYVICCNYK 433
>gi|291390448|ref|XP_002711720.1| PREDICTED: adrift-like [Oryctolagus cuniculus]
Length = 769
Score = 78.6 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 74/220 (33%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQI-----LQSNR-RIVDLGSSPGSWSQVAARITGSN 92
V++A ++ K +I + Q+ R V L +PG++ S+
Sbjct: 104 VRKAVNAELCTQAWCKFHEILCSFPLLPQEAFQNGRLNSVHLCEAPGAFIASLNHYLKSH 163
Query: 93 ---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-------------- 135
+ V E + D L ++ ++
Sbjct: 164 RFPCEWSWVANTLNPYHEANDNLMMVMDDRLIANTLQWWYFGPDNTGDIMTLKYLTGLQD 223
Query: 136 -------PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 224 FLSSMDTVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGSGGSFVLKMFTLFE 283
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 284 HCSINLMYLLNCSFDQVHVFKPATSKAGNSEVYVVCLHYK 323
>gi|270705618|ref|ZP_06223086.1| FtsJ-like methyltransferase [Haemophilus influenzae HK1212]
gi|270315795|gb|EFA27917.1| FtsJ-like methyltransferase [Haemophilus influenzae HK1212]
Length = 136
Score = 78.6 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI 128
+VDLG++PG WSQ G RV+A DIL+M PI+GV F + DF D + +
Sbjct: 1 MTVVDLGAAPGGWSQYVVSQIGGK---GRVIACDILEMAPIVGVDFLQGDFRDENVLNAL 57
Query: 129 RQAI-GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
+ D+V+SDMA G +D R M L E A ++L G F+VK FQG
Sbjct: 58 LARVGEDKVDVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCKQVLASKGSFVVKVFQGE 117
Query: 188 TTNDILCLLKKHFQKVIHV 206
++ L + F V
Sbjct: 118 GFDEYLRETRSLFNVVKVR 136
>gi|154288380|ref|XP_001544985.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408626|gb|EDN04167.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 259
Score = 78.6 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH +M LC AA F+ +L GG F+ K +QG + LK+ FQ V
Sbjct: 157 MMNTSGMSFRDHAGSMDLCRAALEFSFNVLKTGGHFVCKFYQGAEDKALERQLKELFQTV 216
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
KP +SR+ES E + + ++
Sbjct: 217 HREKPESSRSESKEAYFIGLRRKQ 240
>gi|23273317|gb|AAH35005.1| FtsJ methyltransferase domain containing 1 [Homo sapiens]
gi|325463439|gb|ADZ15490.1| FtsJ methyltransferase domain containing 1 [synthetic construct]
Length = 770
Score = 78.6 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNTR-------------------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
++ D L + F + D+ + +F+
Sbjct: 162 RYPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTGLQN 221
Query: 134 G-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYK 321
>gi|241999224|ref|XP_002434255.1| conserved hypothetical protein [Ixodes scapularis]
gi|215496014|gb|EEC05655.1| conserved hypothetical protein [Ixodes scapularis]
Length = 627
Score = 78.3 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/215 (18%), Positives = 72/215 (33%), Gaps = 26/215 (12%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNR-RIVDLGSSPGSWS----QVAARITGSNA 93
V++ ++ K ++ + Q+ ++ R L +PG++ TGS
Sbjct: 85 VRKTAKPALLTQAWCKFYELLHEFQLADADPLRSFHLCEAPGAFVTALQHYLLSETGSKD 144
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ-------------------AIGG 134
T E D L + E
Sbjct: 145 TWTWYANSLNPYYEGNCSKSTVADDRLMFGTLERWYFGQDQTGDVMSPEFKIEEFLEGKE 204
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDI 192
LV +D + +L A A ++L GG F++K F + +
Sbjct: 205 KFHLVTADGSVDCQDDPAEQESTVAALHGAEIAAAFKLLADGGHFVLKMFTFFESFSVSL 264
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L LL F+KV KP S+ + E++++ +GF+K
Sbjct: 265 LYLLNCLFEKVTVKKPACSKPGNSEVYVVCRGFQK 299
>gi|153791865|ref|NP_060818.4| ftsJ methyltransferase domain-containing protein 1 [Homo sapiens]
gi|153792086|ref|NP_001093112.1| ftsJ methyltransferase domain-containing protein 1 [Homo sapiens]
gi|269849596|sp|Q8IYT2|FTSJ1_HUMAN RecName: Full=FtsJ methyltransferase domain-containing protein 1;
AltName: Full=Protein adrift homolog
gi|21759769|gb|AAH34468.1| FTSJD1 protein [Homo sapiens]
Length = 770
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNTR-------------------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
++ D L + F + D+ + +F+
Sbjct: 162 RFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTGLQN 221
Query: 134 G-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYK 321
>gi|332846366|ref|XP_003315241.1| PREDICTED: LOW QUALITY PROTEIN: ftsJ methyltransferase
domain-containing protein 1-like [Pan troglodytes]
Length = 770
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNTR-------------------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
++ D L + F + D+ + +F+
Sbjct: 162 RFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTGLQN 221
Query: 134 G-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYK 321
>gi|119579650|gb|EAW59246.1| hypothetical protein FLJ11171, isoform CRA_a [Homo sapiens]
gi|119579651|gb|EAW59247.1| hypothetical protein FLJ11171, isoform CRA_a [Homo sapiens]
gi|189054682|dbj|BAG37532.1| unnamed protein product [Homo sapiens]
Length = 770
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNTR-------------------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
++ D L + F + D+ + +F+
Sbjct: 162 RFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTGLQN 221
Query: 134 G-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYK 321
>gi|7023671|dbj|BAA92047.1| unnamed protein product [Homo sapiens]
Length = 770
Score = 78.3 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNTR-------------------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
++ D L + F + D+ + +F+
Sbjct: 162 RFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTGLQN 221
Query: 134 G-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYK 321
>gi|168277830|dbj|BAG10893.1| FLJ11171 protein [synthetic construct]
Length = 770
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNTR-------------------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
++ D L + F + D+ + +F+
Sbjct: 162 RFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTGLQN 221
Query: 134 G-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYK 321
>gi|156543832|ref|XP_001606646.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
vitripennis]
Length = 855
Score = 78.3 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 70/208 (33%), Gaps = 28/208 (13%)
Query: 47 WRARSAYKLLQINEKHQIL---------QSNRRIVDLGSSPGSWSQVAARITGSNANNTR 97
+ R+A K+ I++ + D+ + PG +S+ A
Sbjct: 252 FLNRAAVKMANIDKACNFMFTQPDNLQSDDLLYFADVCAGPGGFSEYVLWRKKWRAKGFG 311
Query: 98 VVAID----ILDMEPILGVKFFKFDFLD-----------LDSWEFIRQAIGGNP--DLVL 140
+ L + F + + + + G+ ++
Sbjct: 312 FTLKNENDFKLHDFHAGPCETFHPYYGPKEDGNVYDPKNQVALKELIMKQTGDQGVHFMM 371
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKK 198
+D + G I + + L AL ++ GG F+ K F + ++ ++ +
Sbjct: 372 ADGGFSVEGQENIQEILSKQLYLCQCLVALMIVRTGGHFVTKLFDLFTPFSGGLVYIMYR 431
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F +V KP SR + E +L+ KG R
Sbjct: 432 CFDQVSIFKPNTSRPANSERYLICKGKR 459
>gi|291336704|gb|ADD96245.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C1388]
Length = 111
Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 48/71 (67%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSW 81
+ S ++W+N+H D YV+ +Q +R+R+ +KL +I EK+ I +S++ I+DLGS+PGSW
Sbjct: 37 KKESIKNWVNKHSKDRYVKLSQTGNYRSRAFHKLHEIQEKYSIFKSSQNILDLGSAPGSW 96
Query: 82 SQVAARITGSN 92
S+ +R
Sbjct: 97 SEYVSRNFKEK 107
>gi|196018641|ref|XP_002118844.1| hypothetical protein TRIADDRAFT_34847 [Trichoplax adhaerens]
gi|190578007|gb|EDV18669.1| hypothetical protein TRIADDRAFT_34847 [Trichoplax adhaerens]
Length = 96
Score = 77.9 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
+++LSDMA T G R ++H+ M+L E+ F+ + L+ G ++K F+G
Sbjct: 1 MQNNQCNVILSDMAPNTSGTRSLNHINIMNLAESVFDFSQQFLSKNGHMIIKLFEGNKNK 60
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ L+KHF+ V KP AS +S E+F++ FR
Sbjct: 61 EFYNKLRKHFKNVHFFKPEASYKDSSEIFIVGL-FR 95
>gi|297284403|ref|XP_001100343.2| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
isoform 1 [Macaca mulatta]
gi|297284405|ref|XP_002802586.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
isoform 2 [Macaca mulatta]
gi|297284407|ref|XP_002802587.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
isoform 3 [Macaca mulatta]
gi|297284409|ref|XP_002802588.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
isoform 4 [Macaca mulatta]
gi|297284411|ref|XP_002802589.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
isoform 5 [Macaca mulatta]
gi|297284413|ref|XP_002802590.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
isoform 6 [Macaca mulatta]
Length = 770
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNT-------------------RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
++ D L + F + D+ + +F+
Sbjct: 162 RFPCDWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTGLQN 221
Query: 134 G-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYK 321
>gi|328780882|ref|XP_394722.4| PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
1-like [Apis mellifera]
Length = 744
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 28/208 (13%)
Query: 47 WRARSAYKLLQINEKHQILQSNRR---------IVDLGSSPGSWSQVAARITGSNANNTR 97
+ R+A K+ I+ + ++R+ D+ + PG +S+ T +A
Sbjct: 139 FLNRAAVKMANIDRACNFMFTDRKHLGKNELLYFADVCAGPGGFSEYVLWRTKWHAKGFG 198
Query: 98 VVAID-----------------ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVL 140
+ P F + ++ ++
Sbjct: 199 FTLKNENDFKLADFYAGSPETFHPYYGPKDNGDVFDSENQRTFRELIMKYTHNKGVHFMM 258
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKK 198
SD + G + + + L AL ++ G F+ K F + ++ L+ +
Sbjct: 259 SDGGFSVEGKENLQEILSKQLYLCQCLVALMIVREKGHFVTKLFDIFTPFSAGLIYLMYR 318
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F ++ KP +SR + E +L+ K R
Sbjct: 319 CFDEICIFKPNSSRPANSERYLICKSKR 346
>gi|301771139|ref|XP_002920991.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
[Ailuropoda melanoleuca]
gi|281351463|gb|EFB27047.1| hypothetical protein PANDA_009815 [Ailuropoda melanoleuca]
Length = 766
Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 72/220 (32%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 100 VKKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 159
Query: 93 ---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-------------- 135
+ + V E + D L ++ +
Sbjct: 160 RFPCDWSWVANTLNPYHEANDNLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKYLTGLQN 219
Query: 136 -------PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
L+ +D ++ G+ SL AL L GG F++K F
Sbjct: 220 FVSNMATIHLITADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTLFE 279
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 280 HCSINLMYLLNCSFDQVHVFKPATSKAGNSEVYVVCLHYK 319
>gi|84998454|ref|XP_953948.1| ribosomal RNA methyltransferase (FtsJ ) [Theileria annulata]
gi|65304946|emb|CAI73271.1| ribosomal RNA methyltransferase (FtsJ homologue), putative
[Theileria annulata]
Length = 359
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 45/203 (22%)
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANNTR-------------------------VVAIDI 103
+ +VDL S+PGSWSQ+ +++ + + +VAIDI
Sbjct: 119 KNVVDLCSAPGSWSQLLSKMVHEDYETLKNACKKLQTQQEVCKNLVEYVNIKPVIVAIDI 178
Query: 104 LDMEPILGVKFFKFDFLDLDSWEF--------------------IRQAIGGNPDLVLSDM 143
M PI GV+F K D D + + + + N L+ D
Sbjct: 179 QQMAPIEGVRFLKGDITDPEILKEVLQLFIENVSRNINQAYGGEYDEKLRRNAQLITCDG 238
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
A G + D L ++A +L+ G F+ KTF I + F
Sbjct: 239 APDISGLHETDSFLQSYLIKSALSVCFSLLDPDGCFICKTFFSSENTPIFTQVSSFFDYC 298
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
KP ASR+ S E F++A G++
Sbjct: 299 TIFKPSASRSSSFEHFIVAVGYK 321
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN-RRIVDLGSSPGSWSQVAARIT 89
+ D Y ++A+ EG+RARSAYKLLQI E IL L S
Sbjct: 5 TKENRDIYYRKAKEEGFRARSAYKLLQIFESFHILYPKLDEESALSILLNSSCSYCEHNI 64
Query: 90 GSNANNTRVVAIDI 103
N ++V +
Sbjct: 65 NKNDYIDKIVISER 78
>gi|123397252|ref|XP_001301053.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
gi|121882182|gb|EAX88123.1| FtsJ-like methyltransferase family protein [Trichomonas vaginalis
G3]
Length = 690
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 68/215 (31%), Gaps = 34/215 (15%)
Query: 47 WRARSAYKLLQINEKHQI---------------LQSNRRIVDLGSSPGSWSQVAARITGS 91
++ R+A K+ ++ L+ D+ + PG ++
Sbjct: 262 FQNRAAMKMANLDAIFNFTNSPEFPNLAPNCGKLEDYFYFADICAGPGGFTDYLYWRLDG 321
Query: 92 NAN-------------NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR----QAIGG 134
A + I + + G + F + + +
Sbjct: 322 RAKGFGMTLAGDHDWAQPEMFLSTIPNFTKVYGPEGNGNIFNPDNIEDLYNTIKTETNNK 381
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDI 192
LV +D G L AL +L GG FL KTF + ++
Sbjct: 382 MVQLVTADGGTAVDGEENAQEQLHKRLVLCQFLTALRVLRKGGSFLCKTFDVYTDFSVEL 441
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L LL + F + +KP SR + E +++ G R+
Sbjct: 442 LYLLAQCFNRFCIIKPYTSRPANSERYVVGLGLRE 476
>gi|70937915|ref|XP_739701.1| ribosomal RNA methyltransferase [Plasmodium chabaudi chabaudi]
gi|56516893|emb|CAH75037.1| ribosomal RNA methyltransferase, putative [Plasmodium chabaudi
chabaudi]
Length = 245
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
G ID L ++ +L +GG+F+ K F+G T ++ L K F+K+
Sbjct: 1 PDITGMNDIDEFIQSQLILSSLKVCCSVLKVGGNFISKIFRGEYTGLLIFHLNKFFEKIY 60
Query: 205 HVKPVASRAESVEMFLLAKGF 225
KP +SR +S+E FL+ F
Sbjct: 61 VCKPQSSRNKSLESFLVCLNF 81
>gi|221114237|ref|XP_002154859.1| PREDICTED: similar to FtsJ methyltransferase domain containing 2
[Hydra magnipapillata]
Length = 775
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 77/217 (35%), Gaps = 36/217 (16%)
Query: 47 WRARSAYKLLQINEKH------QILQSNRRIVDL------GSSPGSWSQVAARITGSNAN 94
++ R+A K+ +I+ I + +DL + PG +S+ + A
Sbjct: 176 FQNRAAMKMAEIDASFDYMFTNHIERDLNNPLDLLYFADICAGPGGFSEYVFWRSKWRAK 235
Query: 95 NTRV-----VAIDILDMEPILGV-----------------KFFKFDFLDLDSWEFIRQAI 132
+ A D + I G FK + L + +
Sbjct: 236 GFGMTIKAEWANDFNLADYIAGTPESFDCFYGEGGYNGDGDIFKKENLIAFRKYVLENSD 295
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTN 190
V++D + G I + + L AL +L GG F+ K F +
Sbjct: 296 NKGLHFVMADGGFSVEGQENIQEILSKQLYLCQFLCALSVLRKGGHFICKVFDLFTPFSI 355
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ L+ + F ++ KPV SR + E +L+ K R+
Sbjct: 356 GLVYLMYRAFDQICIFKPVTSRPANSERYLICKDLRE 392
>gi|198425300|ref|XP_002121619.1| PREDICTED: similar to FtsJ methyltransferase domain containing 2
[Ciona intestinalis]
Length = 797
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 76/211 (36%), Gaps = 31/211 (14%)
Query: 47 WRARSAYKLLQINE--KHQILQSNR-------RIVDLGSSPGSWSQVAA----------- 86
+ R+A K+ ++ Q D+ + PG +S+
Sbjct: 198 FLNRAAMKMANMDSILDFMFTQPKCLGNNEILYFADVCAGPGGFSEYILWKKKWRAKGFG 257
Query: 87 --RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-------QAIGGNPD 137
++ A + EP GV + +++
Sbjct: 258 FTLKGPNDFKLGDFFAANSEFFEPHYGVNGIDGNGDIMNTSNLEEFQDFVLTNTNEKGVH 317
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCL 195
V++D + G I + T L AL +L +GG+F++KTF +N ++ L
Sbjct: 318 FVMADGGFSVEGQENIQEILTKQLLMCQIVCALSILRVGGNFVLKTFDLFTPFSNGLIYL 377
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+ F+ V KPV SR + E + + +G+R
Sbjct: 378 LRIAFENVAIYKPVTSRPANSERYAVCQGYR 408
>gi|82595412|ref|XP_725839.1| cell division protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23480991|gb|EAA17404.1| putative cell division protein [Plasmodium yoelii yoelii]
Length = 443
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 39/76 (51%)
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPV 209
ID L ++ +L IGG+F+ K F+G T ++ L K F+K+ KP
Sbjct: 1 MNDIDEFIQSQLILSSLKVCCSVLKIGGNFISKIFRGEYTGLLIFYLNKFFEKIYVCKPQ 60
Query: 210 ASRAESVEMFLLAKGF 225
+SR +S+E FL+ F
Sbjct: 61 SSRNKSLESFLVCLNF 76
>gi|194764414|ref|XP_001964325.1| GF21495 [Drosophila ananassae]
gi|190619250|gb|EDV34774.1| GF21495 [Drosophila ananassae]
Length = 789
Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 34/214 (15%)
Query: 47 WRARSAYKLLQINEKHQILQSNRR---------------IVDLGSSPGSWSQVAARIT-- 89
+ R+A K+ I+ + +N R D+ + PG +S+
Sbjct: 172 FLNRAAVKMANIDSMCDFMFTNPRDLDGHSLVANDELLYFTDMCAGPGGFSEYVLHRKSW 231
Query: 90 -----------GSNANNTRVVAIDILDMEPILGVK---FFKFDFLDLDSWEFIRQAIGGN 135
++ + A + GVK + ++IR+
Sbjct: 232 EAKGFGFTLRGANDFKLDKFFAASPEPFDAYYGVKEDGNIFDEANQDSLNDYIRRHTPQG 291
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDIL 193
++D + G I + + L AL++L G F+ K F + ++
Sbjct: 292 VHFAMADGGFSVEGQENIQEILSKQLYLCQFLTALKILRENGSFVCKVFDLFTPFSVGLV 351
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L+ K F ++ +KP +SR + E +L+ K +++
Sbjct: 352 YLMYKCFHQISIIKPNSSRPANSERYLVCK-YKR 384
>gi|194887980|ref|XP_001976842.1| GG18562 [Drosophila erecta]
gi|190648491|gb|EDV45769.1| GG18562 [Drosophila erecta]
Length = 788
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 33/213 (15%)
Query: 47 WRARSAYKLLQINEKHQILQSNRR---------------IVDLGSSPGSWSQVAARIT-- 89
+ R+A K+ I+ + +N R D+ + PG +S+
Sbjct: 172 FLNRAAVKMANIDSMCDFMFTNPRDPAGQSLVAPDELLYFTDMCAGPGGFSEYVLFRKSW 231
Query: 90 -----------GSNANNTRVVAIDILDMEPILGVK---FFKFDFLDLDSWEFIRQAIGGN 135
++ + A + GVK + E+IR
Sbjct: 232 EAKGFGFTLRGANDFKLEKFFAASPESFDTFYGVKEDGNIFDESNQDSLNEYIRMHTPQG 291
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDIL 193
++D + G I + + L AL++L G F+ K F + ++
Sbjct: 292 VHFAMADGGFSVEGQENIQEILSKQLYLCQFLTALKILRPNGSFVCKVFDLFTPFSVGLV 351
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+ K FQ++ +KP +SR + E +L+ K R
Sbjct: 352 YLMYKCFQQIAIIKPNSSRPANSERYLVCKYKR 384
>gi|73957412|ref|XP_546838.2| PREDICTED: similar to CG5032-PA [Canis familiaris]
Length = 766
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 72/220 (32%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 100 VKKSVNAELCTQAWCKFHEILCSFPLIPQEAFQDGKLNSLHLCEAPGAFIASLNHYLKSH 159
Query: 93 ---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-------------- 135
+ + V E + D L ++ +
Sbjct: 160 RFPCDWSWVANTLNPYHEANDNLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKYLTGLQN 219
Query: 136 -------PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
L+ +D ++ G+ SL AL L GG F++K F
Sbjct: 220 FVSNMATIHLITADGSFDCQGNPGEQEALVSSLHYCEVVTALMTLGSGGSFVLKMFTLFE 279
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 280 HCSINLMYLLNCSFDQVHVFKPATSKAGNSEVYVVCLRYK 319
>gi|296231527|ref|XP_002761179.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1
isoform 1 [Callithrix jacchus]
gi|296231529|ref|XP_002761180.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1
isoform 2 [Callithrix jacchus]
Length = 770
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 71/220 (32%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-------------- 135
+ V E + D L ++ +
Sbjct: 162 RFPCDWNWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKYLTGLQN 221
Query: 136 -------PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
L+ +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FISSMATIHLITADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLHYK 321
>gi|74152928|dbj|BAE34476.1| unnamed protein product [Mus musculus]
Length = 429
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQI-----LQSNR-RIVDLGSSPGSWSQVAARITGSN 92
V++A ++ K +I + QS R + L +PG++ S+
Sbjct: 102 VKKAVNAELCTQAWCKFQEILCSFPLIPQEAFQSGRLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNT-------------------RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
R++ D L + F + D+ + +++
Sbjct: 162 RFPCEWSWVANSLNPYHEANDNLRMITDDRLMANTLHCWYFGPDNTGDIMTLKYLTGLQD 221
Query: 134 -----GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FLSGMSPIHLVTADGSFDCQGNPGEQEALVSSLHYCEAVTALITLGDGGSFVLKMFTLFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSVNLMYLLNCSFDQVHVFKPATSKAGNSEVYVVCLRYK 321
>gi|158294159|ref|XP_315423.4| AGAP005415-PA [Anopheles gambiae str. PEST]
gi|157015436|gb|EAA11922.4| AGAP005415-PA [Anopheles gambiae str. PEST]
Length = 720
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 69/217 (31%), Gaps = 36/217 (16%)
Query: 47 WRARSAY------KLLQINEKHQILQSNR---RIVDLGSSPG----SWSQVAARITGSNA 93
+R R+ + KL + ++++ + V L +PG +
Sbjct: 104 YRIRAEFVTQAFAKLYECVSAYELIDGQQQELYSVHLCEAPGAFVTGLNHYIRLHCAPRT 163
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFI---------------------RQAI 132
E D L + R
Sbjct: 164 KWAWFACTLNPHYEGNCPGNMIPDDRFILHTLGSWCFGADGTGDIMVRENRDAIIKRSQR 223
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND- 191
LV +D + + + R L A T AL +L+ G F++K F +
Sbjct: 224 FPTVHLVTADGSIDCLNVPEEQEERVAKLHLAETVLALSVLSPGQHFVLKMFTLFEHSSV 283
Query: 192 -ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+L LL F ++ KP S+ + E++++AK +R+
Sbjct: 284 SLLFLLNHCFDELHVFKPCTSKPGNSEVYIVAKHYRQ 320
>gi|82596865|ref|XP_726438.1| cell division protein FtsJ [Plasmodium yoelii yoelii str. 17XNL]
gi|23481849|gb|EAA18003.1| FtsJ cell division protein [Plasmodium yoelii yoelii]
Length = 125
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D Y + A+ G+RARSA+KL+QI +K+ I ++ ++DL ++PG W QVA +
Sbjct: 9 KERIDKYYKLAKSAGYRARSAFKLIQIAKKYNIFKNANILIDLCAAPGGWLQVAYKNMNK 68
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
N+ T + + + V K D + I+ I V+ + P
Sbjct: 69 NS--TIIGVDLVPIRKIDNNVITIKSDITSSECIRKIKDIIKYEKADVILNDGAP 121
>gi|194208779|ref|XP_001498370.2| PREDICTED: similar to adrift CG5032-PA [Equus caballus]
Length = 768
Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 71/220 (32%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 100 VRKSVNAELCTQAWCKFHEILWSFPLIPQEAFQNGKLNTLHLCEAPGAFIASLNHYLKSH 159
Query: 93 ---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-------------- 135
+ + V E + D L ++
Sbjct: 160 RLPCDWSWVANTLNPYHEANDNLMMIMDDRLIANTLRQWYFGPDNTGDIMTLQYLTGLQN 219
Query: 136 -------PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
L+ +D ++ G+ SL AL L GG F++K F
Sbjct: 220 FVSNMATIHLITADGSFDCQGNPGEQEALVSSLHYCEVVTALMTLGNGGSFVLKMFTLFE 279
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 280 HCSINLMYLLNCSFDQVHVFKPATSKAGNSEVYVVCLHYK 319
>gi|291236302|ref|XP_002738079.1| PREDICTED: FtsJ methyltransferase domain containing 2-like
[Saccoglossus kowalevskii]
Length = 829
Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/217 (19%), Positives = 74/217 (34%), Gaps = 37/217 (17%)
Query: 47 WRARSAYKLLQINEKHQI------------LQSNRRIV---DLGSSPGSWSQVAARITGS 91
+ R+A K+ ++ L ++ D+ + PG +S+
Sbjct: 225 FLNRAAMKMANMDYVFDFMFTNPKTLDGQPLVKGNELLYFADICAGPGGFSEYVLWRKNW 284
Query: 92 NANNTRV-------------VAIDILDMEPILGVKFFKFDFLDLDSWEFIR-------QA 131
+A + EP GV D S
Sbjct: 285 HAKGFGFTLKGANDFKLEDFFSTSPELFEPYYGVDGIDGDGNIYRSDNLKEFQRFVLQNT 344
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTT 189
G V++D + G I + + L AL ++ GG+F+ KTF +
Sbjct: 345 DGKGVHFVMADGGFSVAGQENIQEILSKQLLLCQFLCALSIIREGGNFVCKTFDLFTPFS 404
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ LL + FQ+V KPV SR + E +++ +G R
Sbjct: 405 VGLIYLLYRAFQRVTLFKPVTSRPANSERYVVCQGLR 441
>gi|119910252|ref|XP_001250105.1| PREDICTED: adrift-like [Bos taurus]
gi|297485425|ref|XP_002694893.1| PREDICTED: adrift-like [Bos taurus]
gi|296478127|gb|DAA20242.1| adrift-like [Bos taurus]
Length = 764
Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 70/220 (31%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 100 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 159
Query: 93 ---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG---------------- 133
+ V E + D L ++
Sbjct: 160 RFPCDWNWVANTLNPYHEANDNLTMIMDDRLIANTLHCWYFGPDNTGDIMTLKYLTGLQN 219
Query: 134 -----GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
G L+ +D ++ G+ L AL L GG F++K F
Sbjct: 220 FINSMGTIHLITADGSFDCQGNPGEQEALVSCLHYCEAVTALMTLGNGGSFVLKMFTLFE 279
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 280 HCSINLMYLLNCSFDQVHIFKPATSKAGNSEVYVVCLYYK 319
>gi|85080610|ref|XP_956572.1| hypothetical protein NCU03987 [Neurospora crassa OR74A]
gi|28917641|gb|EAA27336.1| predicted protein [Neurospora crassa OR74A]
Length = 2042
Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSN--RRIVDLGSSPGSWSQVA 85
W R ND Y + A+ G ++R+A+KLL+IN+K+++ + N + +VDLG +PGSWSQVA
Sbjct: 1636 QWKARQSNDYYARSARTAGLKSRAAFKLLEINKKYRLFRRNSSQIVVDLGFAPGSWSQVA 1695
Query: 86 ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
+T + +VV IDI+ +P GV + +FL
Sbjct: 1696 LDLTKPD---GKVVGIDIIPAQPPRGVSSIQGNFLSDGVR 1732
Score = 62.5 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 36/70 (51%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G DH +M LC AA FA + L GG F+ K +QG + +LKK F KV
Sbjct: 1965 MMNTSGISFKDHAGSMDLCYAALSFANDTLKPGGHFVCKFYQGSEDKKLENMLKKLFTKV 2024
Query: 204 IHVKPVASRA 213
KP +SR+
Sbjct: 2025 HRDKPDSSRS 2034
>gi|195487715|ref|XP_002092019.1| GE11900 [Drosophila yakuba]
gi|194178120|gb|EDW91731.1| GE11900 [Drosophila yakuba]
Length = 700
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 68/206 (33%), Gaps = 31/206 (15%)
Query: 51 SAYKLLQINEKHQIL-QSNRRIVDLGSSPGSWSQVAARITGSNANNTRV----------- 98
+ KL + ++ ++ + + L +PG++ S + +
Sbjct: 114 AWCKLFECLHRYPLVTKPAVNSLHLCEAPGAFIASLNHYLHSKYHKDEIKWRWRSTTLNP 173
Query: 99 ----------VAIDILDMEPILGVKFFKFDFLD-------LDSWEFIRQAIGGNPDLVLS 141
+ D + F K + + + G DLV +
Sbjct: 174 YYEGNALNQMITDDRFIFHTLDNWLFHKDLTGNLLDVANIDHLVKRCEEEFQGQVDLVTA 233
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + + L A AL +L+ GG FLVK F + +L L
Sbjct: 234 DGSIDCAAQPDCQEEIVVRLFFAEVLSALRILSSGGSFLVKMFTLFEACSVSLLYTLNCI 293
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F++V KP S+ + E++++ +
Sbjct: 294 FEEVHIFKPATSKRGNSEVYVICLNY 319
>gi|157818599|ref|NP_001099656.1| ftsJ methyltransferase domain-containing protein 1 [Rattus
norvegicus]
gi|149038174|gb|EDL92534.1| rCG51680 [Rattus norvegicus]
Length = 767
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQI-----LQSNR-RIVDLGSSPGSWSQVAARITGSN 92
V++A ++ K +I + QS R + L +PG++ S+
Sbjct: 102 VRKAVNAELCTQAWCKFQEILCSFPLIPQEAFQSGRLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNT-------------------RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
R++ D L + F + D+ + +++
Sbjct: 162 RFPCEWSWVANSLNPYHEANDNLRMITDDRLIANTLHRWYFGPDNTGDIMTLKYLTGLQD 221
Query: 134 -----GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ L AL L GG F++K F
Sbjct: 222 FLSGTSPIHLVTADGSFDCQGNPGEQEALVSPLHYCEAVTALTTLGDGGSFVLKMFTLFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E++++ ++
Sbjct: 282 HCSVNLMYLLNCSFDQVHVFKPATSKAGNSEVYVVCLCYK 321
>gi|45478098|gb|AAS66220.1| LRRG00129 [Rattus norvegicus]
Length = 1035
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 72/219 (32%), Gaps = 39/219 (17%)
Query: 47 WRARSAYKLLQINEKHQ-------------ILQSNR----RIVDLGSSPGSWSQVAARIT 89
+ R+A K+ ++ +L+ + D+ + PG +S+
Sbjct: 344 FLNRAAMKMANMDFVFDRMFTNPLDSSGKPLLKESDIDLLYFADVCAGPGGFSEYVLWRR 403
Query: 90 GSNANNTRVVAIDILDM---------------EPILGVKFFKFDFLDLDSWEFIRQA--- 131
+A + D G D ++ R
Sbjct: 404 KWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGVDGDGDITRPENINAFRNFVLD 463
Query: 132 --IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
V++D + G + + + L AL ++ GG F+ KTF
Sbjct: 464 NTDRKGVHFVMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFVCKTFDLFTP 523
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KPV SR + E +++ KG +
Sbjct: 524 FSVGLIYLLYCCFERVCLFKPVTSRPANSERYVVCKGLK 562
>gi|2695746|emb|CAA11034.1| Pmt2 [Schizosaccharomyces pombe]
Length = 663
Score = 76.0 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 164 AATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
+ A E L GG F+ K F+ N++L + K+ F KV KP +SR S E+F++ +
Sbjct: 1 MSMKLACEFLVAGGTFVTKVFRSRDYNNLLWVFKQLFNKVEATKPPSSRNVSAEIFVVCR 60
Query: 224 GFR 226
G++
Sbjct: 61 GYK 63
>gi|195584389|ref|XP_002081989.1| GD11317 [Drosophila simulans]
gi|194193998|gb|EDX07574.1| GD11317 [Drosophila simulans]
Length = 701
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 31/208 (14%)
Query: 51 SAYKLLQINEKHQIL-QSNRRIVDLGSSPGSWSQVAARITGSNANNTRV---VAIDILDM 106
+ KL + ++ ++ + + L +PG++ S + L+
Sbjct: 114 AWCKLFECLHRYPLVTKPAVNSMHLCEAPGAFIASLNHYLHSKYEKNEIKWRWRSTTLNP 173
Query: 107 EPILGV--KFFKFDFLDLDSWEFIRQA-----------------------IGGNPDLVLS 141
D + + G DLV +
Sbjct: 174 YYEGNALNHMISDDRFIFHTLDNWLFHKDLTGNLLDVANIDHLVERCEVEFQGQVDLVTA 233
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + + L A AL +L+ GG+FLVK F + +L L
Sbjct: 234 DGSIDCAAQPDCQEEIVVRLFFAEVLSALRILSSGGNFLVKMFTLFEACSVSLLYTLNCI 293
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F++V KP S+ + E++++ + K
Sbjct: 294 FEEVHIFKPATSKRGNSEVYVICLNYNK 321
>gi|159151710|gb|ABW92363.1| CG6379-PA [Drosophila melanogaster]
gi|159151712|gb|ABW92364.1| CG6379-PA [Drosophila melanogaster]
gi|159151714|gb|ABW92365.1| CG6379-PA [Drosophila melanogaster]
gi|159151716|gb|ABW92366.1| CG6379-PA [Drosophila melanogaster]
gi|159151718|gb|ABW92367.1| CG6379-PA [Drosophila melanogaster]
gi|159151720|gb|ABW92368.1| CG6379-PA [Drosophila melanogaster]
gi|159151722|gb|ABW92369.1| CG6379-PA [Drosophila melanogaster]
gi|159151724|gb|ABW92370.1| CG6379-PA [Drosophila melanogaster]
gi|159151726|gb|ABW92371.1| CG6379-PA [Drosophila melanogaster]
gi|159151728|gb|ABW92372.1| CG6379-PA [Drosophila melanogaster]
gi|159151730|gb|ABW92373.1| CG6379-PA [Drosophila melanogaster]
gi|159151732|gb|ABW92374.1| CG6379-PA [Drosophila melanogaster]
Length = 236
Score = 76.0 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
E+IR ++D + G + I + + L AL++L G F+ K F
Sbjct: 4 EYIRMHTPQGVHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILRPNGSFVCKVFD 63
Query: 186 --GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ ++ L+ K FQ++ +KP +SR + E +L+ K +++
Sbjct: 64 LFTPFSVGLVYLMYKCFQQIAIIKPNSSRPANSERYLVCK-YKR 106
>gi|261327754|emb|CBH10731.1| rRNA methyltransferase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 284
Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 81/224 (36%), Gaps = 45/224 (20%)
Query: 47 WRARSAYKLLQINEKHQILQS-NRRIVDLGSSPGSWSQVAARITGSNANNT-------RV 98
+R RSAYKLL++++K + +R +VDL ++PG +S+VA + + + T V
Sbjct: 2 YRCRSAYKLLELDDKFSLFGGCSRTVVDLAAAPGGFSEVALQRMTAAEDVTSRPPVKPLV 61
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI----------GGNPDLVLSDMAYPTI 148
+A D M+ + + + D + D+VL D
Sbjct: 62 IAFDTRPMKAARDLHVVQCNINDHKRVIASVEEFIQRRGVGDGADRQVDVVLHDGVSVAK 121
Query: 149 GHRKIDHLRTMSLC---------------------------EAATFFALEMLNIGGDFLV 181
H + E + + G F+
Sbjct: 122 SHSAFSVTYAQNQMAVGALRLACALFLLSSQPAGTRQPPRAEDGLASSSKAEPQGPTFVT 181
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
K + N +L +K +F+ V +P A S E +++A+GF
Sbjct: 182 KAMRSAHFNQVLSAMKAYFRHVSVHRPAECNAASSETYVVARGF 225
>gi|195477219|ref|XP_002100135.1| GE16874 [Drosophila yakuba]
gi|194187659|gb|EDX01243.1| GE16874 [Drosophila yakuba]
Length = 788
Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 33/213 (15%)
Query: 47 WRARSAYKLLQINEKHQILQSNRR---------------IVDLGSSPGSWSQVAARIT-- 89
+ R+A K+ I+ + +N R D+ + PG +S+
Sbjct: 172 FLNRAAVKMANIDSMCDFMFTNPRDPAGESLVAPDELLYFTDMCAGPGGFSEYVLFRKSW 231
Query: 90 -----------GSNANNTRVVAIDILDMEPILGVK---FFKFDFLDLDSWEFIRQAIGGN 135
++ + A + GVK + E++R
Sbjct: 232 EAKGFGFTLRGANDFKLEKFFAASPESFDTFYGVKEDGNIFDESNQDSLNEYVRMHTPQG 291
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDIL 193
++D + G I + + L AL++L G F+ K F + ++
Sbjct: 292 VHFAMADGGFSVEGQENIQEILSKQLYLCQFLTALKILRPNGSFVCKVFDLFTPFSVGLV 351
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+ K F ++ +KP +SR + E +L+ K R
Sbjct: 352 YLMYKCFHQIAIIKPNSSRPANSERYLVCKYKR 384
>gi|118088049|ref|XP_419486.2| PREDICTED: similar to KIAA0082 [Gallus gallus]
Length = 897
Score = 75.6 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
+++D + G + + + L AL ++ GG F+ KTF
Sbjct: 457 NTDHKGVHFLMADGGFSVEGQENLQEILSKQLMLCQFLMALSIVRTGGHFVCKTFDLFTP 516
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KPV SR + E +++ KG +
Sbjct: 517 FSVGLVYLLYCCFERVCIFKPVTSRPANSERYVVCKGLK 555
>gi|195340901|ref|XP_002037051.1| GM12706 [Drosophila sechellia]
gi|194131167|gb|EDW53210.1| GM12706 [Drosophila sechellia]
Length = 788
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 76/213 (35%), Gaps = 33/213 (15%)
Query: 47 WRARSAYKLLQINEKHQILQSNRR---------------IVDLGSSPGSWSQVAARIT-- 89
+ R+A K+ I+ + ++ R D+ + PG +S+
Sbjct: 172 FLNRAAVKMANIDSMCDFMFTDPRDPDGQTLVGRDELLYFTDMCAGPGGFSEYVLYRKSW 231
Query: 90 -----------GSNANNTRVVAIDILDMEPILGVK---FFKFDFLDLDSWEFIRQAIGGN 135
++ + A + GVK + E+IR
Sbjct: 232 EAKGFGFTLRGANDFKLEKFFAASPESFDTFYGVKDDGNIFDESNQDSLNEYIRMHTPQG 291
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDIL 193
++D + G + I + + L AL++L G F+ K F + ++
Sbjct: 292 VHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILRPNGSFICKLFDLFTPFSVGLV 351
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+ + FQ++ +KP +SR + E +L+ K R
Sbjct: 352 YLMYQCFQQIAIIKPNSSRPANSERYLVCKYKR 384
>gi|72388286|ref|XP_844567.1| rRNA methyltransferase [Trypanosoma brucei TREU927]
gi|62175370|gb|AAX69513.1| rRNA methyltransferase, putative [Trypanosoma brucei]
gi|62359681|gb|AAX80113.1| hypothetical protein Tb04.30K5.570 [Trypanosoma brucei]
gi|70801100|gb|AAZ11008.1| rRNA methyltransferase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 284
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 45/224 (20%)
Query: 47 WRARSAYKLLQINEKHQILQSN-RRIVDLGSSPGSWSQVAARITGSNANNT-------RV 98
+R RSAYKLL++++K + R +VDL ++PG +S+VA + + + T V
Sbjct: 2 YRCRSAYKLLELDDKFSLFGGCCRTVVDLAAAPGGFSEVALQRMTAAEDVTSRPPVKPLV 61
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI----------GGNPDLVLSDMAYPTI 148
+A D M+ + + + D + D+VL D
Sbjct: 62 IAFDTRPMKAARDLHVVQCNINDHKRVIASVEEFIQRRGVGDGADRQVDVVLHDGVSVAK 121
Query: 149 GHRKIDHLRTMSLC---------------------------EAATFFALEMLNIGGDFLV 181
H + E + + G F+
Sbjct: 122 SHSAFSVTYAQNQMAVGALRLACALFLLSSQPAGTRQPPRAEDGLASSSKAEPQGPTFVT 181
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
K + N +L +K +F+ V +P A S E +++A+GF
Sbjct: 182 KAMRSAHFNQVLSAMKAYFRHVSVHRPAECNAASSETYVVARGF 225
>gi|4375869|emb|CAA22952.1| EG:52C10.7 [Drosophila melanogaster]
Length = 700
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 31/208 (14%)
Query: 51 SAYKLLQINEKHQIL-QSNRRIVDLGSSPGSW---------------------------S 82
+ KL + ++ ++ + + L +PG++
Sbjct: 114 AWCKLFECLHRYPLVTKPAVNSMHLCEAPGAFIASLNHYLHSKYEKDEIKWRWRSTTLNP 173
Query: 83 QVAARITGSNANNTRVVAIDILDMEPILGVK-FFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
++ R + + + + E G DLV +
Sbjct: 174 YYEGNAINQMISDDRFIVHTLDNWFFHKDLTGNLLDVANIDHLVERCEVEFQGQVDLVTA 233
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + + L A AL +L+ GG+FLVK F + +L L
Sbjct: 234 DGSIDCAAQPDCQEEIVVRLFFAEVLSALRILSSGGNFLVKMFTLFEACSVSLLYTLNCI 293
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F++V KP S+ + E++++ + K
Sbjct: 294 FEEVHIFKPATSKRGNSEVYVICLNYNK 321
>gi|194880879|ref|XP_001974580.1| GG21823 [Drosophila erecta]
gi|190657767|gb|EDV54980.1| GG21823 [Drosophila erecta]
Length = 700
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 69/208 (33%), Gaps = 31/208 (14%)
Query: 51 SAYKLLQINEKHQIL-QSNRRIVDLGSSPGSWSQVAARITGSNANNTRV----------- 98
+ KL + ++ ++ + + L +PG++ S + +
Sbjct: 114 AWCKLFECLHRYPLVTKPAVNTLHLCEAPGAFIASLNHYLHSKYHKDEIKWRWRSTTLNP 173
Query: 99 ----------VAIDILDMEPILGVKFFKFDFLD-------LDSWEFIRQAIGGNPDLVLS 141
++ D + F K + E G DLV +
Sbjct: 174 YYEGNALNQMISDDRFIFHTLDNWLFHKDLTGNLLDVANIDHLVERCEAVFQGQVDLVTA 233
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + + L A AL +L+ GG FL+K F + +L L
Sbjct: 234 DGSIDCAAQPDCQEEIVVRLFFAEVLSALRILSGGGSFLLKMFTLFEACSVSLLYTLNCI 293
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F++V KP S+ + E++++ + K
Sbjct: 294 FEEVHIFKPATSKRGNSEVYVICLNYHK 321
>gi|15150423|gb|AAK84935.1| SD02116p [Drosophila melanogaster]
Length = 700
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 31/208 (14%)
Query: 51 SAYKLLQINEKHQIL-QSNRRIVDLGSSPGSW---------------------------S 82
+ KL + ++ ++ + + L +PG++
Sbjct: 114 AWCKLFECLHRYPLVTKPAVNSMHLCEAPGAFIASLNHYLHSKYEKDEIKWRWRSTTLNP 173
Query: 83 QVAARITGSNANNTRVVAIDILDMEPILGVK-FFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
++ R + + + + E G DLV +
Sbjct: 174 YYEGNAINQMISDDRFIVHTLDNWFFHKDLTGNLLDVANIDHLVERCEVEFQGQVDLVTA 233
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + + L A AL +L+ GG+FLVK F + +L L
Sbjct: 234 DGSIDCAAQPDCQEEIVVRLFFAEVLSALRILSSGGNFLVKMFTLFEACSVSLLYTLNCI 293
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F++V KP S+ + E++++ + K
Sbjct: 294 FEEVHIFKPATSKRGNSEVYVICLNYNK 321
>gi|17137638|ref|NP_477413.1| adrift [Drosophila melanogaster]
gi|7302710|gb|AAF57788.1| adrift [Drosophila melanogaster]
Length = 700
Score = 75.6 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 31/208 (14%)
Query: 51 SAYKLLQINEKHQIL-QSNRRIVDLGSSPGSW---------------------------S 82
+ KL + ++ ++ + + L +PG++
Sbjct: 114 AWCKLFECLHRYPLVTKPAVNSMHLCEAPGAFIASLNHYLHSKYEKDEIKWRWRSTTLNP 173
Query: 83 QVAARITGSNANNTRVVAIDILDMEPILGVK-FFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
++ R + + + + E G DLV +
Sbjct: 174 YYEGNAINQMISDDRFIVHTLDNWFFHKDLTGNLLDVANIDHLVERCEVEFQGQVDLVTA 233
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + + L A AL +L+ GG+FLVK F + +L L
Sbjct: 234 DGSIDCAAQPDCQEEIVVRLFFAEVLSALRILSSGGNFLVKMFTLFEACSVSLLYTLNCI 293
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F++V KP S+ + E++++ + K
Sbjct: 294 FEEVHIFKPATSKRGNSEVYVICLNYNK 321
>gi|291334187|gb|ADD93854.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S08-C1340]
gi|291336828|gb|ADD96362.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C727]
Length = 121
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 1/121 (0%)
Query: 106 MEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAA 165
M+ I GV F K D L I + DLVLSD+A G +D + + E+
Sbjct: 1 MKKIKGVHFIKGDINKLADRSQIYAKMNKA-DLVLSDIAPNISGIEDVDQANFVEILESI 59
Query: 166 TFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++L I G ++K F G + + LK+ F KV KP +SR S E+F + G+
Sbjct: 60 LSICSDLLKINGVLVMKFFIGSSYDFSRGKLKQSFSKVATYKPDSSRRSSNEVFFVCNGY 119
Query: 226 R 226
+
Sbjct: 120 K 120
>gi|195121712|ref|XP_002005364.1| GI19115 [Drosophila mojavensis]
gi|193910432|gb|EDW09299.1| GI19115 [Drosophila mojavensis]
Length = 697
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 69/208 (33%), Gaps = 31/208 (14%)
Query: 51 SAYKLLQINEKHQILQ-SNRRIVDLGSSPGSWSQVAARITGSN------ANNTRVVAIDI 103
+ K + ++ +++ + L +PG++ S + R ++
Sbjct: 98 AWCKFFECLHRYPLIKQPELNTLHLCEAPGAFIAALNHYLHSTYTKEEINWHWRSTTLNP 157
Query: 104 LD-----MEPILGVKFFKFDFLD-----------------LDSWEFIRQAIGGNPDLVLS 141
E I +F + + + + L+ +
Sbjct: 158 YYEGNGLNEMITDDRFIFHTLNNWLFHRDFTGNLLNVENIEHMRDVCAKDLPAGVQLITA 217
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + L A AL +L+ G+F++K F + I+ +L
Sbjct: 218 DGSIDCSAQPDCQEEIVARLLFAEILSALHILSPSGNFVIKMFTLFEACSVSIMFMLNCI 277
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F++V KP S+ + E++++ ++K
Sbjct: 278 FERVHIFKPATSKRGNSEVYVICLNYQK 305
>gi|145539966|ref|XP_001455673.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423481|emb|CAK88276.1| unnamed protein product [Paramecium tetraurelia]
Length = 437
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID--ILDMEPILGV 112
L ++N + +L+ +++LGS G W++ + GSN + +V AID L GV
Sbjct: 14 LTELNARFGLLKKGMSVIELGSGSGHWTETLRKTIGSNREDPKVFAIDEVQLPKRCRDGV 73
Query: 113 KFFKFDFLDLDSW-EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
F + D ++ + +Q DL++S++ + R ID+ + L A AL+
Sbjct: 74 IFIQGDVDKKETIMKLQKQLDLKPVDLIISNLESRSQNDRDIDNFEQIRLNRIALNIALK 133
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L GG L+K +G + F++ I V+P ++ + ++ + L GF++
Sbjct: 134 TLKTGGTMLIKAREGLPEEQNFKFINLFFRETIKVRPQTAKLDFLKHYYLGLGFKQ 189
>gi|195335398|ref|XP_002034352.1| GM21824 [Drosophila sechellia]
gi|194126322|gb|EDW48365.1| GM21824 [Drosophila sechellia]
Length = 701
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 69/208 (33%), Gaps = 31/208 (14%)
Query: 51 SAYKLLQINEKHQIL-QSNRRIVDLGSSPGSWSQVAARITGSNANNTRV----------- 98
+ KL + ++ ++ + + L +PG++ S +
Sbjct: 114 AWCKLFECLHRYPLVTKPAVHSMHLCEAPGAFIASLNHYLHSKYEKNEIKWRWRSTTLNP 173
Query: 99 ----------VAIDILDMEPILGVKFFKFDFLD-------LDSWEFIRQAIGGNPDLVLS 141
++ D + F K + E G DLV +
Sbjct: 174 YYEGNALNQMISDDRFIFHTLDNWLFHKDLTGNLLDVANIDHLVERCEVEFQGQVDLVTA 233
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + + L A AL +L+ GG+FLVK F + +L L
Sbjct: 234 DGSIDCAAQPDCQEEIVVRLFFAEVLSALRILSSGGNFLVKMFTLFEACSVSLLYTLNCI 293
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F++V KP S+ + E++++ + K
Sbjct: 294 FEEVHIFKPATSKRGNSEVYVICLNYNK 321
>gi|74828469|sp|Q9UAS6|FTSJ1_DROME RecName: Full=FtsJ methyltransferase domain-containing protein 1
homolog; AltName: Full=Protein Adrift
gi|4530433|gb|AAD22030.1| Adrift [Drosophila melanogaster]
Length = 700
Score = 75.2 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 67/208 (32%), Gaps = 31/208 (14%)
Query: 51 SAYKLLQINEKHQIL-QSNRRIVDLGSSPGSW---------------------------S 82
+ KL + ++ ++ + + L +PG++
Sbjct: 114 AWCKLFECLHRYPLVTKPAVNSMHLCEAPGAFIASLNHYLHSKYEKDEIKWRWRSTTLNP 173
Query: 83 QVAARITGSNANNTRVVAIDILDMEPILGVK-FFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
++ R + + + + E G DLV +
Sbjct: 174 YYEGNAINQMISDDRFIVHTLDNWFFHKDLTGNLLDVANIDHLVERCEVEFQGQVDLVTA 233
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + + L A AL +L+ GG+FLVK F + +L L
Sbjct: 234 DGSIDCAAQPDCQEEIVVRLFFAEVLSALRILSSGGNFLVKMFTLFEACSVSLLYTLNCI 293
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F++V KP S+ + E++++ + K
Sbjct: 294 FEEVHIFKPATSKRGNSEVYVICLNYNK 321
>gi|21360808|gb|AAM49718.1|AF458590_1 hypothetical protein [Homo sapiens]
Length = 340
Score = 75.2 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 73/220 (33%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ---ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-------------- 135
+ + V E + D L ++ +
Sbjct: 162 RFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWHLGPDNTGDIMTLKFLTGLQN 221
Query: 136 -------PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 IISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL F +V KP S+A + E+++++ ++
Sbjct: 282 HCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYVVSLHYK 321
>gi|301604142|ref|XP_002931731.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
[Xenopus (Silurana) tropicalis]
Length = 729
Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 73/208 (35%), Gaps = 34/208 (16%)
Query: 51 SAYKLLQINEKHQILQSNR------RIVDLGSSPGSWSQVAARITGSNANNT-------- 96
+ K +I K+ +L +N V L +PG++ + +
Sbjct: 96 AWCKFHEIAWKYPLLPTNAVWNSELNTVHLCEAPGAFIASLNHYLKTQDDCCDWNWVANT 155
Query: 97 -----------RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-----GNPDLVL 140
++A D + F + D+ + +++ LV
Sbjct: 156 LNPYHEANDGLVMIADDRFIANTLPWWYFGPDNTGDIMTIKYLNGLQQFISNMSAVHLVT 215
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK---TFQGGTTNDILCLLK 197
+D ++ G L L L+ GG F++K FQ + N ++ LL
Sbjct: 216 ADGSFDCQGDPGEQESLVSPLHYCEVVTCLLTLSKGGSFVLKMFTLFQHSSIN-LMYLLN 274
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGF 225
F +V +KP S+A + E++++ +
Sbjct: 275 CCFSEVHIIKPGTSKAGNSEVYVVCLDY 302
>gi|62078793|ref|NP_001014053.1| cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 [Rattus
norvegicus]
gi|81883532|sp|Q5U2Z5|MTR1_RAT RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1;
AltName: Full=FtsJ methyltransferase domain-containing
protein 2
gi|55249721|gb|AAH85799.1| FtsJ methyltransferase domain containing 2 [Rattus norvegicus]
gi|149043523|gb|EDL96974.1| similar to RIKEN cDNA 1300018I05, isoform CRA_a [Rattus norvegicus]
gi|149043524|gb|EDL96975.1| similar to RIKEN cDNA 1300018I05, isoform CRA_a [Rattus norvegicus]
Length = 837
Score = 74.8 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 72/219 (32%), Gaps = 39/219 (17%)
Query: 47 WRARSAYKLLQINEKHQ-------------ILQSNR----RIVDLGSSPGSWSQVAARIT 89
+ R+A K+ ++ +L+ + D+ + PG +S+
Sbjct: 231 FLNRAAMKMANMDFVFDRMFTNPLDSSGKPLLKESDIDLLYFADVCAGPGGFSEYVLWRR 290
Query: 90 GSNANNTRVVAIDILDM---------------EPILGVKFFKFDFLDLDSWEFIRQA--- 131
+A + D G D ++ R
Sbjct: 291 KWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGVDGDGDITRPENINAFRNFVLD 350
Query: 132 --IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
V++D + G + + + L AL ++ GG F+ KTF
Sbjct: 351 NTDRKGVHFVMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFVCKTFDLFTP 410
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KPV SR + E +++ KG +
Sbjct: 411 FSVGLIYLLYCCFERVCLFKPVTSRPANSERYVVCKGLK 449
>gi|326915346|ref|XP_003203980.1| PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
1-like [Meleagris gallopavo]
Length = 831
Score = 74.8 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
+++D + G + + + L AL ++ GG F+ KTF
Sbjct: 348 NTDHKGVHFLMADGGFSVEGQENLQEILSKQLMLCQFLMALSIVRTGGHFVCKTFDLFTP 407
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KPV SR + E +++ KG +
Sbjct: 408 FSVGLVYLLYCCFERVCIFKPVTSRPANSERYVVCKGLK 446
>gi|50510351|dbj|BAD32161.1| mKIAA0082 protein [Mus musculus]
Length = 690
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 72/219 (32%), Gaps = 39/219 (17%)
Query: 47 WRARSAYKLLQINEKHQ-------------ILQSNR----RIVDLGSSPGSWSQVAARIT 89
+ R+A K+ ++ +L+ + D+ + PG +S+
Sbjct: 117 FLNRAAMKMANMDFVFDRMFTNPLDSSGKPLLKESDIDLLYFADVCAGPGGFSEYVLWRK 176
Query: 90 GSNANNTRVVAIDILDM---------------EPILGVKFFKFDFLDLDSWEFIRQA--- 131
+A + D G D ++ R
Sbjct: 177 KWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGVDGDGDITRPENINAFRNFVLD 236
Query: 132 --IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
V++D + G + + + L AL ++ GG F+ KTF
Sbjct: 237 NTDRKGVHFVMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFVCKTFDLFTP 296
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KP+ SR + E +++ KG +
Sbjct: 297 FSVGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLK 335
>gi|260830142|ref|XP_002610020.1| hypothetical protein BRAFLDRAFT_237949 [Branchiostoma floridae]
gi|229295383|gb|EEN66030.1| hypothetical protein BRAFLDRAFT_237949 [Branchiostoma floridae]
Length = 584
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/217 (17%), Positives = 70/217 (32%), Gaps = 37/217 (17%)
Query: 47 WRARSAYKLLQINEKHQIL------QSNRRIV---------DLGSSPGSWSQVAARITGS 91
++ R+A K+ ++ + +V D+ + PG +S+
Sbjct: 160 FQNRAAMKMANMDHVFDYMFTEPKNDKGEPMVGAHDLLYFADICAGPGGFSEYVLWRKKW 219
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP--------------- 136
+A + D + F I
Sbjct: 220 HAKGFGLTIRGPNDFKLEEFFAASSEMFEPHYGEGGIDGDGDIMKPANLTTFKKFVLDST 279
Query: 137 -----DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTT 189
V++D + G + + + L AL +L IGG F+ KTF +
Sbjct: 280 EGKGVHFVMADGGFSVEGQENLQEVLSKQLVLCEFLCALSILRIGGCFVCKTFDLFTPFS 339
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ LL F +V KP+ SR + E +++ KG +
Sbjct: 340 VGLVYLLYHCFHQVCIFKPITSRPANSERYVVCKGLK 376
>gi|159151708|gb|ABW92362.1| CG6379-PA [Drosophila simulans]
Length = 236
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
E+IR ++D + G + I + + L AL++L G F+ K F
Sbjct: 4 EYIRMHTPQGVHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILRPNGSFVCKLFD 63
Query: 186 --GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ ++ L+ + FQ++ +KP +SR + E +L+ K +++
Sbjct: 64 LFTPFSVGLVYLMYQCFQQIAIIKPNSSRPANSERYLVCK-YKR 106
>gi|153217142|ref|ZP_01950906.1| cell division protein FtsJ [Vibrio cholerae 1587]
gi|124113835|gb|EAY32655.1| cell division protein FtsJ [Vibrio cholerae 1587]
Length = 60
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++L G F+VK FQG +D + ++ F+ V KP +SR+ S E+F++A G++
Sbjct: 1 MCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFKVVKIRKPDSSRSRSREVFIVATGYK 59
>gi|74214476|dbj|BAE31091.1| unnamed protein product [Mus musculus]
gi|74214791|dbj|BAE31230.1| unnamed protein product [Mus musculus]
Length = 837
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 72/219 (32%), Gaps = 39/219 (17%)
Query: 47 WRARSAYKLLQINEKHQ-------------ILQSNR----RIVDLGSSPGSWSQVAARIT 89
+ R+A K+ ++ +L+ + D+ + PG +S+
Sbjct: 231 FLNRAAMKMANMDFVFDRMFTNPLDSSGKPLLKESDIDLLYFADVCAGPGGFSEYVLWRK 290
Query: 90 GSNANNTRVVAIDILDM---------------EPILGVKFFKFDFLDLDSWEFIRQA--- 131
+A + D G D ++ R
Sbjct: 291 KWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGVDGDGDITRPENINAFRNFVLD 350
Query: 132 --IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
V++D + G + + + L AL ++ GG F+ KTF
Sbjct: 351 NTDRKGVHFVMADGGFSVEGQENLQEIFSKQLLLCQFLMALSVVRTGGHFVCKTFDLFTP 410
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KP+ SR + E +++ KG +
Sbjct: 411 FSVGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLK 449
>gi|224047575|ref|XP_002187143.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 828
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 71/219 (32%), Gaps = 39/219 (17%)
Query: 47 WRARSAYKLLQINEKHQ-------------ILQSNR----RIVDLGSSPGSWSQVAARIT 89
+ R+A K+ ++ +++ D+ + PG +S+
Sbjct: 225 FLNRAAMKMANMDHVFDYMFTNPKDCQGVPLIKECDAELLYFADVCAGPGGFSEYVLWRR 284
Query: 90 GSNANNTRVVAIDILDME-----------PILGVKFFKFDFLDLDSWEFIRQAIGGNP-- 136
+A + D + D + A
Sbjct: 285 KWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGIDGDGDITRSENITAFQNFVLD 344
Query: 137 -------DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
+++D + G + + + L AL ++ GG+F+ KTF
Sbjct: 345 NTDHKGVHFLMADGGFSVEGQENLQEILSKQLMLCQFLTALSIVRTGGNFVCKTFDLFTP 404
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KPV SR + E +++ KG +
Sbjct: 405 FSVGLVYLLYCCFERVCIFKPVTSRPANSERYVVCKGLK 443
>gi|147906507|ref|NP_001085512.1| cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 [Xenopus
laevis]
gi|82184587|sp|Q6GQ76|MTR1_XENLA RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1;
AltName: Full=FtsJ methyltransferase domain-containing
protein 2
gi|49115039|gb|AAH72871.1| MGC80283 protein [Xenopus laevis]
Length = 846
Score = 74.4 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 69/220 (31%), Gaps = 39/220 (17%)
Query: 47 WRARSAYKLLQINEKHQI-------------LQSNRR----IVDLGSSPGSWSQVAARIT 89
+ R+A K+ I+ L+ D+ + PG +S+
Sbjct: 232 FLNRAAMKMANIDHVFDYMFTNPKDSQGKPKLKDKESELLYFADVCAGPGGFSEYVLWRK 291
Query: 90 GSNANNTRVVAIDILDME-----------PILGVKFFKFDFLDLDSWEFIRQAIGGNP-- 136
+A + D + D + A
Sbjct: 292 KWHAKGFGMTLKGPNDFKLEDFYAAPSELFEPYYGEGGVDGDGDVTRPENITAFRNFILD 351
Query: 137 -------DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
+++D + G I + + L L ++ GG F+ KTF
Sbjct: 352 NTDHKGVHFMMADGGFSVEGQENIQEILSKQLLLCQFLVGLHVIRTGGHFICKTFDLFTP 411
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ ++ LL F++V KP+ SR + E +++ +G ++
Sbjct: 412 FSVGLIYLLYCCFERVCLFKPLTSRPANSERYVVCRGLKE 451
>gi|326927123|ref|XP_003209744.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
[Meleagris gallopavo]
Length = 763
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/221 (17%), Positives = 78/221 (35%), Gaps = 32/221 (14%)
Query: 37 PYVQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITG 90
P+V+++ ++ K ++ +L + V L +PG++
Sbjct: 100 PHVKKSVNAELCTQAWCKFHEMLCSFPLLPAEALQEGQLNSVHLCEAPGAFIASLNHYLK 159
Query: 91 SNANNT-------------------RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
S+ + ++ D L + F + D+ S + +
Sbjct: 160 SHHIHCDWNWVANTLNPYHEANDTLMMIMDDRLIANTLPWWHFGPDNTGDVMSLKHLTGL 219
Query: 132 IGG-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
LV +D ++ G+ L T AL +L GG F++K F
Sbjct: 220 QNFVSNMATIHLVTADGSFDCQGNPGEQEALVSPLHYCETVTALMILGAGGSFVLKMFTL 279
Query: 187 GT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ ++L LL F++V KP S+A + E +++ +
Sbjct: 280 FEHCSTNLLFLLNCCFEEVHVFKPATSKAGNSEAYVICLRY 320
>gi|74191719|dbj|BAE32821.1| unnamed protein product [Mus musculus]
Length = 837
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 72/219 (32%), Gaps = 39/219 (17%)
Query: 47 WRARSAYKLLQINEKHQ-------------ILQSNR----RIVDLGSSPGSWSQVAARIT 89
+ R+A K+ ++ +L+ + D+ + PG +S+
Sbjct: 231 FLNRAAMKMANMDFVFDRMFTNPLDSSGKPLLKESDIDLLYFADVCAGPGGFSEYVLWRK 290
Query: 90 GSNANNTRVVAIDILDM---------------EPILGVKFFKFDFLDLDSWEFIRQA--- 131
+A + D G D ++ R
Sbjct: 291 KWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGVDGDGDITRPENINAFRNFVLD 350
Query: 132 --IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
V++D + G + + + L AL ++ GG F+ KTF
Sbjct: 351 NTDRKGVHFVMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFVCKTFDLFTP 410
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KP+ SR + E +++ KG +
Sbjct: 411 FSVGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLK 449
>gi|195425949|ref|XP_002061219.1| GK10359 [Drosophila willistoni]
gi|194157304|gb|EDW72205.1| GK10359 [Drosophila willistoni]
Length = 789
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 33/213 (15%)
Query: 47 WRARSAYKLLQINEK-HQIL-----QSNRRIV---------DLGSSPGSWSQVAARIT-- 89
+ R+A K+ I+ + Q +V D+ + PG +S+
Sbjct: 172 FLNRAAVKMANIDTMCDNMFTEPKDQDGNSLVGPDELLYFTDMCAGPGGFSEYVLFRKSW 231
Query: 90 -----------GSNANNTRVVAIDILDMEPILGVK---FFKFDFLDLDSWEFIRQAIGGN 135
++ + A +P GV E+IR+
Sbjct: 232 EAKGFGFTLRGANDFKLEKFFAASPESFDPFYGVHDDGNIFNQDNQDSLNEYIRKHTPQG 291
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDIL 193
++D + G I + + L AL++L G+F+ K F + ++
Sbjct: 292 VHFAMADGGFSVEGQENIQEILSKQLYLCQFLTALKILRENGNFVCKVFDLFTPFSVGLV 351
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L+ K F ++ +KP +SR + E +L+ K R
Sbjct: 352 YLMYKSFYQIAIIKPNSSRPANSERYLVCKNKR 384
>gi|21311939|ref|NP_083067.1| cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 [Mus
musculus]
gi|81906080|sp|Q9DBC3|MTR1_MOUSE RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1;
AltName: Full=FtsJ methyltransferase domain-containing
protein 2
gi|12836695|dbj|BAB23771.1| unnamed protein product [Mus musculus]
gi|19354353|gb|AAH24691.1| RIKEN cDNA 1300018I05 gene [Mus musculus]
gi|26334891|dbj|BAC31146.1| unnamed protein product [Mus musculus]
gi|26335867|dbj|BAC31634.1| unnamed protein product [Mus musculus]
gi|26348519|dbj|BAC37899.1| unnamed protein product [Mus musculus]
gi|74139681|dbj|BAE31692.1| unnamed protein product [Mus musculus]
gi|74185441|dbj|BAE30191.1| unnamed protein product [Mus musculus]
gi|74219494|dbj|BAE29520.1| unnamed protein product [Mus musculus]
gi|74220584|dbj|BAE31504.1| unnamed protein product [Mus musculus]
gi|74225491|dbj|BAE31655.1| unnamed protein product [Mus musculus]
gi|148690680|gb|EDL22627.1| RIKEN cDNA 1300018I05, isoform CRA_a [Mus musculus]
gi|148690681|gb|EDL22628.1| RIKEN cDNA 1300018I05, isoform CRA_a [Mus musculus]
Length = 837
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 72/219 (32%), Gaps = 39/219 (17%)
Query: 47 WRARSAYKLLQINEKHQ-------------ILQSNR----RIVDLGSSPGSWSQVAARIT 89
+ R+A K+ ++ +L+ + D+ + PG +S+
Sbjct: 231 FLNRAAMKMANMDFVFDRMFTNPLDSSGKPLLKESDIDLLYFADVCAGPGGFSEYVLWRK 290
Query: 90 GSNANNTRVVAIDILDM---------------EPILGVKFFKFDFLDLDSWEFIRQA--- 131
+A + D G D ++ R
Sbjct: 291 KWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGVDGDGDITRPENINAFRNFVLD 350
Query: 132 --IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
V++D + G + + + L AL ++ GG F+ KTF
Sbjct: 351 NTDRKGVHFVMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFVCKTFDLFTP 410
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KP+ SR + E +++ KG +
Sbjct: 411 FSVGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLK 449
>gi|26339874|dbj|BAC33600.1| unnamed protein product [Mus musculus]
Length = 837
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/219 (16%), Positives = 72/219 (32%), Gaps = 39/219 (17%)
Query: 47 WRARSAYKLLQINEKHQ-------------ILQSNR----RIVDLGSSPGSWSQVAARIT 89
+ R+A K+ ++ +L+ + D+ + PG +S+
Sbjct: 231 FLNRAAMKMANMDFVFDRMFTNPLDSSGKPLLKESDIDLLYFADVCAGPGGFSEYVLWRK 290
Query: 90 GSNANNTRVVAIDILDM---------------EPILGVKFFKFDFLDLDSWEFIRQA--- 131
+A + D G D ++ R
Sbjct: 291 KWHAKGFGMTLKGPNDFKLEDFYSASSELFEPYYGEGGVDGDGDITRPENINAFRNFVLD 350
Query: 132 --IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
V++D + G + + + L AL ++ GG F+ KTF
Sbjct: 351 NTDRKGVHFVMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFVCKTFDLFTP 410
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KP+ SR + E +++ KG +
Sbjct: 411 FSVGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLK 449
>gi|322801951|gb|EFZ22498.1| hypothetical protein SINV_09148 [Solenopsis invicta]
Length = 1056
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/226 (16%), Positives = 71/226 (31%), Gaps = 38/226 (16%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQ------ILQ----SNRRIVDLGSSPGSWSQVAARI 88
V+ ++ K +I I + R V L +PG++
Sbjct: 80 VKENIQAELVTQAWCKFYEIASNFSLVPLNEIFRGVDGKKFRSVHLCEAPGAFVAALNHW 139
Query: 89 TGSNANNTR---------VVAIDILDMEPILGVKFFKFDFLDLDS--------------- 124
+NA++ + + +F +
Sbjct: 140 LKTNASDVQWDWLATTLNPYCEGNSYDSMVADDRFIRHTLEHWCFGADNTGDILNLRNLD 199
Query: 125 --WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
E + GG LV +D + L T +++L+ GG+FL+K
Sbjct: 200 DLVEKSKSLDGGRILLVTADGSIDCTNVPGEQESTVAQLHLCETVACMQLLHKGGNFLLK 259
Query: 183 TFQGGTTND--ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F ++ LL F +V KP +S+ + EM+++ F+
Sbjct: 260 LFTLFEHQSVCLMYLLSCIFHQVSVTKPASSKGGNSEMYVVCMNFK 305
>gi|311259633|ref|XP_003128198.1| PREDICTED: hypothetical protein LOC100156357 [Sus scrofa]
Length = 911
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 102 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFICKTFDLFTPFSVGLIY 161
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 162 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 193
>gi|327262300|ref|XP_003215963.1| PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
1-like [Anolis carolinensis]
Length = 857
Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G I + + L L ++ GG F+ KTF + ++
Sbjct: 358 HFLMADGGFSVEGQENIQEILSKQLTLCQFLTGLSVIRTGGHFICKTFDLFTPFSVGLVY 417
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KPV SR + E +++ +G +
Sbjct: 418 LLYCCFERVSIFKPVTSRPANSERYVVCRGLK 449
>gi|158296375|ref|XP_316791.4| AGAP000826-PA [Anopheles gambiae str. PEST]
gi|157015266|gb|EAA12036.5| AGAP000826-PA [Anopheles gambiae str. PEST]
Length = 782
Score = 74.0 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 73/214 (34%), Gaps = 33/214 (15%)
Query: 43 QLEGWRARSAYKLLQINEKHQIL------QSNRRIV---------DLGSSPGSWSQVA-- 85
+ + R+A K+ ++ + + + +V D+ + PG +S+
Sbjct: 147 KSNIFINRAAVKMANMDSMFGFMLTSPVDRHGQPLVRDHDLFYFADVCAGPGGFSEYVLW 206
Query: 86 -----ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW---------EFIRQA 131
A+ G +D D + + E++
Sbjct: 207 RKRWYAKGFGFTLKGAYDFRLDDFSAGSPETFDPHYGPKEDGNVFDPANIVGFTEYVMTQ 266
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTT 189
L+++D + G + + L AL ++ G F++K F +
Sbjct: 267 TETGVHLMMADGGFSVEGQENEQEILSKQLYLCQLIVALAIVRPDGHFVMKVFDLFTPFS 326
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
++ L + F+++ KP +SR + E +L+ K
Sbjct: 327 VGLVYLAYRCFREISICKPNSSRPANSERYLVCK 360
>gi|194755743|ref|XP_001960143.1| GF11674 [Drosophila ananassae]
gi|190621441|gb|EDV36965.1| GF11674 [Drosophila ananassae]
Length = 702
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/256 (15%), Positives = 84/256 (32%), Gaps = 40/256 (15%)
Query: 9 SRRGLTQKVKNRSCQGSSRDW-LNRHINDP-------YVQRAQLEGWRARSAYKLLQINE 60
R VK+R S+++W + + DP + E + + K +
Sbjct: 68 GLRTQLNAVKSRLNDYSTQEWSAHTNRRDPSGEVTWRLKNETKAE-FVTVAWCKFFECLH 126
Query: 61 KHQILQ-SNRRIVDLGSSPGSWSQVAARITGSNANNTRV---VAIDILDMEPILGV--KF 114
++ +++ + L +PG++ S + L+ +
Sbjct: 127 RYPLIKSPVINTLHLCEAPGAFIASLNHYLHSTYKEDEIQWRWRSTTLNPYYEGNALNEM 186
Query: 115 FKFDFLDLDSWEFIRQA-----------------------IGGNPDLVLSDMAYPTIGHR 151
D + + G DL+ +D +
Sbjct: 187 VTDDRFIFHTLDNWLFHKDLTGNLLNVTNIESMAARCAADFQGKVDLITADGSIDCAAQP 246
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPV 209
+ L A F AL++L+ GG+F+VK F + +L +L F +V KP
Sbjct: 247 DCQEEIVVRLFFAEVFSALKILSPGGNFVVKMFTLFEACSVSLLYMLNCIFHQVHIFKPA 306
Query: 210 ASRAESVEMFLLAKGF 225
S+ + E++++ +
Sbjct: 307 TSKRGNSEVYVICLDY 322
>gi|50753649|ref|XP_425111.1| PREDICTED: similar to FLJ11171 protein [Gallus gallus]
Length = 763
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 79/221 (35%), Gaps = 32/221 (14%)
Query: 37 PYVQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITG 90
P+V+++ ++ K ++ +L + V L +PG++
Sbjct: 100 PHVKKSVNAELCTQAWCKFHEMLCSFPLLPAEALQEGQLNSVHLCEAPGAFIASLNHYLK 159
Query: 91 SNANNT-------------------RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
S+ + ++ D L + F + D+ S + +
Sbjct: 160 SHHIHCDWNWVANTLNPYHEANDTLMMIMDDRLIANTLPWWHFGPDNTGDVMSLKHLTGL 219
Query: 132 IGGNPDL-----VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
++ V +D ++ G+ L T AL +L GG F++K F
Sbjct: 220 QNFVSNMATVHLVTADGSFDCQGNPGEQEALVSPLHYCETVTALMILGAGGSFVLKMFTL 279
Query: 187 GT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ ++L LL F++V KP S+A + E +++ +
Sbjct: 280 FEHCSTNLLFLLNCCFEEVHVFKPATSKAGNSEAYVICLRY 320
>gi|307212767|gb|EFN88438.1| Uncharacterized protein FLJ11171 [Harpegnathos saltator]
Length = 488
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 68/219 (31%), Gaps = 40/219 (18%)
Query: 47 WRARSAYKLLQINEKHQI--LQSNRRI----------VDLGSSPGSWSQVA---ARITGS 91
+ ++ K +I + L + I V L +PG++ ++
Sbjct: 99 FITQAWCKFYEIVCNFSLVPLNKIQEINEENICSFSSVHLCEAPGAFVVALNHWLKLNAP 158
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-----------------------EFI 128
+ + + E + D + E
Sbjct: 159 SVKWDWIASTLNPYCEGNPYSQMIDDDRFIRHTLMHWYFGADNTGNIMDLQNLDALVERS 218
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
+ G L+ +D + + L + +L GG+FL+K F
Sbjct: 219 KTISQGPIMLITADGSIDCTDMPDEQENAVVHLHFCEIVTCMHLLEKGGNFLLKVFTLFE 278
Query: 189 TND--ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ LL FQKVI KP SRA + EM+++ F
Sbjct: 279 HQSVCLMYLLACAFQKVIATKPATSRAGNSEMYIVCTNF 317
>gi|332020260|gb|EGI60695.1| FtsJ methyltransferase domain-containing protein 1 [Acromyrmex
echinatior]
Length = 703
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/228 (16%), Positives = 72/228 (31%), Gaps = 38/228 (16%)
Query: 37 PYVQRAQLEGWRARSAYKLLQINEKHQIL---------QSNRRIVDLGSSPGSWSQVAAR 87
P V+ ++ K +I ++ N + V L +PG++
Sbjct: 105 PMVREKIQAELVTQAWCKFYEIASNFSLVPLNEIYEVDGKNFKSVHLCEAPGAFVTALNH 164
Query: 88 ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL--------- 138
+NA++ + + G + D ++ G +
Sbjct: 165 WLKTNASDVQWNWLATTLNPYCEGNSYDNMIADDRFIRHTLKHWCFGADNTGDIMNLKNL 224
Query: 139 ------------------VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
V +D + + L T L +L GG+FL
Sbjct: 225 DTLMKKSESLDSKGRILLVTADGSIDCMNMPGEQETVVAQLHLCETVACLHLLQKGGNFL 284
Query: 181 VKTFQGGTTND--ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+K F ++ LL FQ+V KP +S+ + EM+++ F+
Sbjct: 285 LKLFTLFEHQSVCLMYLLSCTFQQVNVTKPASSKGGNSEMYVVCMNFK 332
>gi|48843539|ref|YP_025112.1| methyltransferase 1 [Neodiprion sertifer NPV]
gi|37626224|gb|AAQ96382.1| methyltransferase 1 [Neodiprion sertifer NPV]
Length = 437
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/204 (14%), Positives = 65/204 (31%), Gaps = 27/204 (13%)
Query: 47 WRARSAYKLLQINEKHQI----LQSNRR----IVDLGSSPGSWSQVAARITGSNANNTRV 98
+ R A K+ I+ L D+ + PG +S+ N +
Sbjct: 150 FINRGAVKMANIDHATNFVFTRLNDGSNELIYFADVCAGPGGFSEYMLWRKKWNIKGYGM 209
Query: 99 VAID-----------------ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
+ P+ + ++ G +++
Sbjct: 210 TLREKNDFQLNRFYDNFSETLHPYYGPLNDGNIYNSQNQKGFCEMIMKDTEGKGVHFMMA 269
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKH 199
D + G + + + + AL ++ IGG ++K F + ++ L+ +
Sbjct: 270 DGGFSVEGQENMQEMLSKKMYLCQCLIALMIIRIGGHCVIKFFDIFTPFSAGLVYLMYRS 329
Query: 200 FQKVIHVKPVASRAESVEMFLLAK 223
F ++ KP +SR + E +L+
Sbjct: 330 FNRICIFKPHSSRPANSERYLVCL 353
>gi|195995913|ref|XP_002107825.1| hypothetical protein TRIADDRAFT_51728 [Trichoplax adhaerens]
gi|190588601|gb|EDV28623.1| hypothetical protein TRIADDRAFT_51728 [Trichoplax adhaerens]
Length = 889
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 84/219 (38%), Gaps = 39/219 (17%)
Query: 47 WRARSAYKLLQINEKHQIL-------QSNRRI--------VDLGSSPGSWSQVAARITGS 91
+ R+A K+ ++ ++ + + N +I D+ + PG +++
Sbjct: 195 FLNRAAMKMANLDYVYKYIFTNPRDDKGNEKIRSLDILYFADICAGPGGFTEYVLWKRRW 254
Query: 92 NANNTRVVAIDILD----------------MEPILGVKFFKFDFLDLDS------WEFIR 129
+A + D + EP GV D + EF+R
Sbjct: 255 HAKGFGITLKDPKNASDFKLTDFLAGTPETFEPYYGVNGVNGDGDVTRTENLRAFAEFVR 314
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
+ G ++D + G I + + L A+ +L GG+F+ K F
Sbjct: 315 SSSEGGVHFAMADGGFSVEGQENIQEILSKQLYLCQFLCAISVLREGGNFVCKLFDIFTP 374
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +L L + F+++ VKP+ SR + E +++ +G+R
Sbjct: 375 FSVGLLYLFYRIFRRISLVKPLTSRPANSERYIVCEGYR 413
>gi|303390693|ref|XP_003073577.1| ribosomal RNA methyltransferase [Encephalitozoon intestinalis ATCC
50506]
gi|303302724|gb|ADM12217.1| ribosomal RNA methyltransferase [Encephalitozoon intestinalis ATCC
50506]
Length = 152
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 109 ILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
+ GV K D I +A+ G DLV+ D A G +ID + L +A
Sbjct: 1 MEGVVCIKGDITSDSCLRSIVEALEGVLADLVMCDGAPDITGIHEIDEYLQIELLMSALS 60
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L + G F+ K QG T ++ ++ + V+ +KP ASR ES+E FL G +
Sbjct: 61 ASLRISKPGSSFVGKCLQGKYTEWMINHFRRFYNGVVLLKPRASRTESMECFLYCVGMK 119
>gi|167518245|ref|XP_001743463.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778562|gb|EDQ92177.1| predicted protein [Monosiga brevicollis MX1]
Length = 951
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 71/208 (34%), Gaps = 32/208 (15%)
Query: 51 SAYKLLQINEKHQILQSNRRIV----DLGSSPGSW----SQVAARITGSNANNTRVVAID 102
+ K+ +I ++++LQ ++ + + +PG++ + ++
Sbjct: 254 AWCKMYEILARYKLLQQHQEMPFATVHVCEAPGAFVAALNHYLRQLYHRELKWNWTGLTL 313
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL----------------------VL 140
E + D L L + ++ V
Sbjct: 314 NPYYEDNNPIDMVDSDTLILLTESHWHFGHDNTGNMMHAPNLKGLRDRVLQQEMRVELVT 373
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKK 198
D A+ T + + T L AL L GG ++K F + ++ LL
Sbjct: 374 GDGAFDTSANPAEQEMLTAQLHYCEAVAALACLAPGGTLVLKMFTFFERCSAALVYLLGG 433
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ + KP S+A + E +++A+ FR
Sbjct: 434 LFETMDICKPATSKAANSETYIVAQRFR 461
Score = 39.0 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L LL F VKP+ S + E F++ + +R
Sbjct: 789 LLHLLCSTFATCRLVKPLTSAPFASECFVVCRDYR 823
>gi|328722620|ref|XP_001945474.2| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
[Acyrthosiphon pisum]
Length = 740
Score = 73.3 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 68/210 (32%), Gaps = 34/210 (16%)
Query: 51 SAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARIT--------------- 89
+ K ++ ++++ V L +PG +
Sbjct: 136 AWLKFFELLNDYELIPQKSIDNGKLCSVHLCEAPGGFISALNHYIVSQEINIEWDWVGVS 195
Query: 90 ----GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP-------DL 138
N ++ D + + F K D+ F ++ +
Sbjct: 196 LNPYHEGNGNPDLINDDRFMLYTLNHWFFGKDHTGDIFQKNFYKELYTFVKNRFGEEAHV 255
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLL 196
V +D + + M L T AL +L GG F+VK F N + L LL
Sbjct: 256 VTADGSMDCQNNPDEQENVVMRLQIVETMVALMILQKGGSFVVKMFTMFECNTLCRLYLL 315
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F V KPV S+ + E++++ G++
Sbjct: 316 SCAFDSVKIKKPVTSKQGNSEVYVVCCGYK 345
>gi|51476892|emb|CAH18412.1| hypothetical protein [Homo sapiens]
Length = 92
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 44/83 (53%)
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
MA G R +DH R +SLC ++L GG FL KT+ G + + L + FQ
Sbjct: 1 MAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQN 60
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
V +KP ASR ES E++ LA +
Sbjct: 61 VRIIKPEASRKESSEVYFLATQY 83
>gi|195153363|ref|XP_002017597.1| GL17223 [Drosophila persimilis]
gi|194113393|gb|EDW35436.1| GL17223 [Drosophila persimilis]
Length = 704
Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+ E + G DL+ +D + + L A T AL +L GG F
Sbjct: 202 MVERCAEDFKDNGSGGVDLITADGSIDCAAQPDCQEEIVVRLFFAETICALRILKTGGKF 261
Query: 180 LVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+VK F + +L +L F++V KP S+ + E++++ ++K
Sbjct: 262 VVKMFTLFEACSVSLLYMLNCIFEQVHIYKPATSKRGNSEVYVICLNYQK 311
>gi|125811195|ref|XP_001361785.1| GA18609 [Drosophila pseudoobscura pseudoobscura]
gi|54636961|gb|EAL26364.1| GA18609 [Drosophila pseudoobscura pseudoobscura]
Length = 704
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+ E + G DL+ +D + + L A T AL +L GG F
Sbjct: 202 MVERCAEDFKDNGSGGVDLITADGSIDCAAQPDCQEEIVVRLFFAETICALRILKTGGKF 261
Query: 180 LVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+VK F + +L +L F++V KP S+ + E++++ ++K
Sbjct: 262 VVKMFTLFEACSVSLLYMLNCIFEQVHIYKPATSKRGNSEVYVICLNYQK 311
>gi|58257642|dbj|BAA07893.2| KIAA0082 [Homo sapiens]
Length = 882
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 406 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVY 465
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 466 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 497
>gi|67900880|ref|XP_680696.1| hypothetical protein AN7427.2 [Aspergillus nidulans FGSC A4]
gi|40742817|gb|EAA62007.1| hypothetical protein AN7427.2 [Aspergillus nidulans FGSC A4]
Length = 675
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 21 SCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGS 80
SS+ W R + D Y + A ++G ++R+A+KLLQ G +PGS
Sbjct: 481 KRFSSSKRWQARQLKDHYTREAAVQGLKSRAAFKLLQ-----------------GYAPGS 523
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPD 137
WSQVA T RV+ +DI+ +P GV + +FLD + ++R +
Sbjct: 524 WSQVALTRTRP---AGRVLGVDIIPSQPPKGVSTIQGNFLDPEVQAYVRDFVRNPRR 577
>gi|41055983|ref|NP_956427.1| cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 [Danio
rerio]
gi|82177092|sp|Q803R5|MTR1_DANRE RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1;
AltName: Full=FtsJ methyltransferase domain-containing
protein 2
gi|27881850|gb|AAH44371.1| FtsJ methyltransferase domain containing 2 [Danio rerio]
Length = 829
Score = 72.9 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG FL KTF + ++
Sbjct: 351 HFLMADGGFSVEGQENLQEILSKQLLLCQFLTALSVVRPGGHFLCKTFDLFTPFSVGLIY 410
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KPV SR + E +++ KG +
Sbjct: 411 LLYLCFERVSLFKPVTSRPANSERYVVCKGLK 442
>gi|242014593|ref|XP_002427971.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512470|gb|EEB15233.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 668
Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 66/219 (30%), Gaps = 32/219 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQS------NRRIVDLGSSPGSWS---QVAARIT 89
V++ + ++ K +I + + V L +PG++ ++
Sbjct: 97 VKKTIAPEFVTQAWLKFYEICCCYDFVSKSAQEAYYLNSVHLCEAPGAFITSLNHYLKLN 156
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR-------------------- 129
+ + E D L + + +
Sbjct: 157 HPDLKWDWISTTLNPYHEENPLSIMINDDRFILHTLDHWKFGEDNTGNLMDLNNMTNLVK 216
Query: 130 -QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
G +V +D + + L AL +L GG+F+VK F
Sbjct: 217 EAENMGPVLMVTADGSIDCQNNPGEQESIVSCLVYCEIVCALHILAKGGNFVVKMFTMYE 276
Query: 189 TND--ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ LL F+ V KP +S+ + E +++ +
Sbjct: 277 EQTICLMYLLVCSFEYVHVFKPASSKEGNSENYVICLNY 315
>gi|195163974|ref|XP_002022824.1| GL14540 [Drosophila persimilis]
gi|194104847|gb|EDW26890.1| GL14540 [Drosophila persimilis]
Length = 589
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 34/214 (15%)
Query: 47 WRARSAYKLLQIN--EKHQILQSNR-------------RIVDLGSSPGSWSQVAARIT-- 89
+ R+A K+ I+ + D+ + PG +S+
Sbjct: 172 FLNRAAVKMANIDSMCDYMFTNPRDLEGRPLVDPKDLLYFTDMCAGPGGFSEYVLFRKLW 231
Query: 90 -----------GSNANNTRVVAIDILDMEPILGVK---FFKFDFLDLDSWEFIRQAIGGN 135
++ + A + G+K D E+IR+
Sbjct: 232 EAKGFGFTLRGANDFKLEKFFAASPESFDTYYGIKDDGNIFDDQNQDSLNEYIRRHTPDG 291
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDIL 193
++D + G I + + L AL++L G+F+ K F + ++
Sbjct: 292 VHFAMADGGFSVEGEENIQEILSKQLYLCQFLTALKILRKNGNFVCKVFDLFTPFSVGLI 351
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L+ K F ++ +KP +SR + E +L+ K +++
Sbjct: 352 YLMYKCFHQIAIIKPNSSRPANSERYLVCK-YKQ 384
>gi|301779423|ref|XP_002925128.1| PREDICTED: s-adenosyl-L-methionine-dependent methyltransferase
FTSJD2-like [Ailuropoda melanoleuca]
gi|308197108|sp|D2HRF1|MTR1_AILME RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1;
AltName: Full=FtsJ methyltransferase domain-containing
protein 2
gi|281344017|gb|EFB19601.1| hypothetical protein PANDA_014567 [Ailuropoda melanoleuca]
Length = 835
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 359 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFICKTFDLFTPFSAGLIY 418
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 419 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 450
>gi|13365825|dbj|BAB39298.1| hypothetical protein [Macaca fascicularis]
Length = 750
Score = 72.5 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 274 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVY 333
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 334 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 365
>gi|109070997|ref|XP_001117026.1| PREDICTED: s-adenosyl-L-methionine-dependent methyltransferase
FTSJD2-like isoform 1 [Macaca mulatta]
gi|297290745|ref|XP_002803764.1| PREDICTED: s-adenosyl-L-methionine-dependent methyltransferase
FTSJD2-like [Macaca mulatta]
Length = 835
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 359 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVY 418
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 419 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 450
>gi|307187912|gb|EFN72825.1| NADPH:adrenodoxin oxidoreductase, mitochondrial [Camponotus
floridanus]
Length = 1106
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 70/227 (30%), Gaps = 39/227 (17%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL----------QSNRRIVDLGSSPGSWSQVAARI 88
V++ ++ K +I ++ N V L +PG++
Sbjct: 111 VKKNIQAELVTQAWCKFYEIASNFFLVPLNEIHREENGKNFTSVHLCEAPGAFVAALNHW 170
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL---------- 138
+NA N + + G + + D ++ G +
Sbjct: 171 LKTNAPNVQWNWLATTLNPYCEGNSYDRMVADDRFIRHTLKHWCFGADNTGDIMDLRNLD 230
Query: 139 -----------------VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV 181
V +D + L T + +L GG+FL+
Sbjct: 231 IFIERCKLLNEKERILLVTADGSVDCTDVPGEQESAVAQLHLCETVACMHLLEKGGNFLL 290
Query: 182 KTFQGGTTND--ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K F ++ LL F +V KP +S+A + EM+++ F+
Sbjct: 291 KLFTLFEHQSVCLMYLLSCVFHQVTVTKPASSKAGNSEMYVVCVNFK 337
>gi|158258565|dbj|BAF85253.1| unnamed protein product [Homo sapiens]
Length = 835
Score = 72.5 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 359 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVY 418
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 419 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 450
>gi|24307983|ref|NP_055865.1| cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 [Homo
sapiens]
gi|197102002|ref|NP_001125983.1| cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 [Pongo
abelii]
gi|332823946|ref|XP_527377.3| PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
[Pan troglodytes]
gi|74750894|sp|Q8N1G2|MTR1_HUMAN RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1;
Short=hMTr1; AltName: Full=FtsJ methyltransferase
domain-containing protein 2; AltName:
Full=Interferon-stimulated gene 95 kDa protein;
Short=ISG95
gi|75041693|sp|Q5R981|MTR1_PONAB RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1;
AltName: Full=FtsJ methyltransferase domain-containing
protein 2
gi|21619429|gb|AAH31890.1| FtsJ methyltransferase domain containing 2 [Homo sapiens]
gi|55729904|emb|CAH91679.1| hypothetical protein [Pongo abelii]
gi|56206050|emb|CAI19603.1| FtsJ methyltransferase domain containing 2 [Homo sapiens]
gi|119624351|gb|EAX03946.1| KIAA0082 [Homo sapiens]
gi|168278501|dbj|BAG11130.1| KIAA0082 protein [synthetic construct]
Length = 835
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 359 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVY 418
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 419 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 450
>gi|332255681|ref|XP_003276961.1| PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
[Nomascus leucogenys]
Length = 835
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 359 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVY 418
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 419 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 450
>gi|83286571|ref|XP_730220.1| cell division protein FtsJ [Plasmodium yoelii yoelii str. 17XNL]
gi|23489880|gb|EAA21785.1| FtsJ cell division protein, putative [Plasmodium yoelii yoelii]
Length = 874
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A D L ++ A + L GG F+ K F+ ++ +L+K F +
Sbjct: 2 CAPNVGTTYSYDSFNQNILVLSSIKLAYKFLTKGGIFITKVFRNEEYVSLIWVLEKLFGE 61
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
V H+KP +SR S E++L+ F
Sbjct: 62 VKHIKPRSSREISSEIYLIGLNF 84
>gi|116201505|ref|XP_001226564.1| hypothetical protein CHGG_08637 [Chaetomium globosum CBS 148.51]
gi|88177155|gb|EAQ84623.1| hypothetical protein CHGG_08637 [Chaetomium globosum CBS 148.51]
Length = 957
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 36/65 (55%)
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
LC AA FA E L GG F+ K +QG LL++ F++V KP ASR ES E F
Sbjct: 880 DLCHAALTFASETLKPGGSFVCKFYQGAEDKAFENLLRQMFRRVHREKPDASRKESREAF 939
Query: 220 LLAKG 224
+A+
Sbjct: 940 FVARD 944
Score = 68.6 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 32 RHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS--NRRIVDLGSSPGSWSQVAARIT 89
R DPY + ++G ++R+A+KL++++ K+ + + +VDLG +PGSWSQVA T
Sbjct: 684 RQSGDPYARARHVKGLKSRAAFKLIELDAKYSFFRRGQGQVVVDLGYAPGSWSQVAVDYT 743
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
N V+ IDI+ +P GV + +FL ++Q
Sbjct: 744 APNGT---VLGIDIIPAQPPRGVSTIQGNFLSPGVQRMVKQ 781
>gi|195436461|ref|XP_002066186.1| GK22226 [Drosophila willistoni]
gi|194162271|gb|EDW77172.1| GK22226 [Drosophila willistoni]
Length = 694
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 32/209 (15%)
Query: 51 SAYKLLQINEKHQIL-QSNRRIVDLGSSPGSWSQVAARITGSNANNTRV---VAIDILDM 106
+ K ++ ++ ++ Q V L +PG++ S + L+
Sbjct: 103 AWCKFFEVLHRYPVVSQPKLNTVHLCEAPGAFIAALNHYLHSKYQKDEIKWNWRSTTLNP 162
Query: 107 EPILGV--------------------------KFFKFDFLDLDSWEFIRQAIGGNPDLVL 140
+ + ++ G DL+
Sbjct: 163 YYEGNALTEMITDDRFIFHTLDHWIFHEDLTGNLINVSNIKGMTDRCMKDFAGQEVDLIT 222
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKK 198
+D + + L A AL +L GG F++K F + +L LL
Sbjct: 223 ADGSIDCAQQPESQEEIVQRLFSAEIITALSILKKGGTFVIKMFTLFEACSVSLLYLLNC 282
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
F+ V KP S+ + E++++ ++K
Sbjct: 283 VFENVNLYKPATSKRGNSEVYVICLDYQK 311
>gi|126723764|ref|NP_001075899.1| FtsJ methyltransferase domain containing 2 [Bos taurus]
gi|308197109|sp|A2VE39|MTR1_BOVIN RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1;
AltName: Full=FtsJ methyltransferase domain-containing
protein 2
gi|126010617|gb|AAI33560.1| FTSJD2 protein [Bos taurus]
gi|296474506|gb|DAA16621.1| FtsJ methyltransferase domain containing 2 [Bos taurus]
Length = 835
Score = 72.1 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
+++D + G + + + L AL ++ GG F+ KTF
Sbjct: 352 NTDHKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFICKTFDLFTP 411
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ LL F++V KP+ SR + E +++ KG +
Sbjct: 412 FSVGLIYLLYCCFERVCLFKPITSRPANSERYVVCKGLK 450
>gi|73972755|ref|XP_538896.2| PREDICTED: similar to CG6379-PA isoform 1 [Canis familiaris]
Length = 1090
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 797 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFICKTFDLFTPFSVGLIY 856
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 857 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 888
>gi|197098086|ref|NP_001125622.1| ftsJ methyltransferase domain-containing protein 1 [Pongo abelii]
gi|75041951|sp|Q5RAY7|FTSJ1_PONAB RecName: Full=FtsJ methyltransferase domain-containing protein 1
gi|55728667|emb|CAH91073.1| hypothetical protein [Pongo abelii]
Length = 769
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 74/220 (33%), Gaps = 32/220 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I ++ + L +PG++ S+
Sbjct: 102 VRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSH 161
Query: 93 ANNTR-------------------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
++ D L + F + D+ + +F+
Sbjct: 162 RFPCHWSWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTGLQN 221
Query: 134 G-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ SL AL L GG F++K F
Sbjct: 222 FISSMATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ +++ LL +V KP S+A + E++++ ++
Sbjct: 282 HCSINLMYLLNCCLDQVHVFKPATSKAGNSEVYVVCLYYK 321
>gi|149028400|gb|EDL83785.1| rCG22889, isoform CRA_b [Rattus norvegicus]
Length = 187
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 164 AATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
A A +L GG F+ K F+G + L+ F V+ KP +SR S+E F + +
Sbjct: 1 MALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRIFFSSVLCAKPKSSRNSSIEAFAVCQ 60
Query: 224 GF 225
G+
Sbjct: 61 GY 62
>gi|22326560|ref|NP_568086.2| FtsJ-like methyltransferase family protein [Arabidopsis thaliana]
gi|332002930|gb|AED90313.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
Length = 61
Score = 72.1 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQ 83
+R D Y ++A+ EGWRARSA+KLLQI+E+ I + +R+VDL ++PGSWSQ
Sbjct: 5 SRDKRDIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQ 57
>gi|194223469|ref|XP_001917983.1| PREDICTED: similar to KIAA0082 [Equus caballus]
Length = 812
Score = 71.7 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 359 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLIY 418
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 419 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 450
>gi|70933466|ref|XP_738102.1| ribosomal RNA methyltransferase [Plasmodium chabaudi chabaudi]
gi|56514043|emb|CAH74365.1| ribosomal RNA methyltransferase, putative [Plasmodium chabaudi
chabaudi]
Length = 97
Score = 71.7 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
DHL + L + T F + +NIGG ++VK + G T+++ LK FQ V KP ASR
Sbjct: 2 DDHLNSCELTLSITNFMEQYINIGGVYIVKMYLGSQTDNLKTYLKTIFQYVNTAKPKASR 61
Query: 213 AESVEMFLLAKGF 225
+ES E++L+ + F
Sbjct: 62 SESREIYLVCRNF 74
>gi|195397365|ref|XP_002057299.1| GJ16429 [Drosophila virilis]
gi|194147066|gb|EDW62785.1| GJ16429 [Drosophila virilis]
Length = 794
Score = 71.7 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 72/210 (34%), Gaps = 33/210 (15%)
Query: 47 WRARSAYKLLQIN--EKHQILQSNRR-------------IVDLGSSPGSWSQVAARITGS 91
+ R+A K+ I+ + Q D+ + PG +S+
Sbjct: 174 FLNRAAVKMANIDSMCDYMFTQPRDSHGNSLIGTNELLYFADMCAGPGGFSEYVLYRKSW 233
Query: 92 NANN-------------TRVVAIDILDMEPILGVK---FFKFDFLDLDSWEFIRQAIGGN 135
A + A + G+K ++IR+
Sbjct: 234 KAKGFGFTLRGTNDFKLDKFFAASPESFDAYYGIKEDGNIFDQSNQDSLNDYIRKHTPQG 293
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDIL 193
++D + G I + + L AL++L I G F+ K F + ++
Sbjct: 294 VHFAMADGGFSVEGQENIQEILSKQLYLCQFVTALKILRINGSFVCKLFDLFTPFSVSLV 353
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
L+ K FQ++ +KP +SR + E +++ K
Sbjct: 354 YLMYKCFQQIAIIKPNSSRPANSERYIVCK 383
>gi|311260344|ref|XP_001924245.2| PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
[Sus scrofa]
Length = 835
Score = 71.7 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 359 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFICKTFDLFTPFSVGLIY 418
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 419 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 450
>gi|327269088|ref|XP_003219327.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
[Anolis carolinensis]
Length = 782
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 73/207 (35%), Gaps = 32/207 (15%)
Query: 51 SAYKLLQINEKHQIL-----QSNR-RIVDLGSSPGSWSQVAARITGSNANNT-------- 96
+ K +I +L Q+ + L +PG++ S+
Sbjct: 131 AWCKFHEILCTFPVLPSEALQNGELNSIHLCEAPGAFIASLNHYLKSHRIPCDWNWVANT 190
Query: 97 -----------RVVAIDILDMEPILGVKFFKFDFLDLDSWE-----FIRQAIGGNPDLVL 140
++ D L + F + D+ + + + LV
Sbjct: 191 LNPYHEANDTLMMIMDDRLIANTLPWWYFGPENTGDVMTLKHLTGLQRFISNMTTVHLVT 250
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKK 198
SD ++ G+ SL T AL L +GG F++K F + ++L LL
Sbjct: 251 SDGSFDCQGNPGEQEALVSSLHYCETVTALMTLGLGGSFVLKMFTLFEHCSVNLLFLLNC 310
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGF 225
F++V KP S+A + E++++ +
Sbjct: 311 SFEEVHVFKPATSKAGNSEVYVVCLCY 337
>gi|312370994|gb|EFR19278.1| hypothetical protein AND_22770 [Anopheles darlingi]
Length = 742
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 80/211 (37%), Gaps = 21/211 (9%)
Query: 38 YVQRAQLEGWRARSAYKLL--QINEKH--QILQ-SNRRIVDL-------GSSPGSWSQVA 85
+V +A + + +AY+L+ + N + + + + L +W A
Sbjct: 134 FVTQAFAKLYECVAAYELIDTEANHLYSVHLCEAPGAFVTALNHYIRLNCRPRMAWDWFA 193
Query: 86 ARITG--SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL----- 138
+ ++ D + + F D+ E I +
Sbjct: 194 CTLNPYYEGNCPGNMIPDDRFILHTLDRWCFGVDATGDILVRENRAAIIERSCQWPMVHL 253
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND--ILCLL 196
V +D + + + R L A T AL +L IGG F++K F + +L LL
Sbjct: 254 VTADGSIDCLDVPEEQEERVSVLHLAETIIALSVLGIGGHFVLKMFTLFEHSSVNLLFLL 313
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
F+++ KP S+ + E++L+AK +R+
Sbjct: 314 HHCFEELHVFKPCTSKPGNSEVYLIAKRYRR 344
>gi|194332651|ref|NP_001123814.1| FtsJ methyltransferase domain containing 2 [Xenopus (Silurana)
tropicalis]
gi|189442295|gb|AAI67621.1| LOC100170565 protein [Xenopus (Silurana) tropicalis]
Length = 503
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTN 190
+++D + G I + + L L ++ GG F+ KTF +
Sbjct: 356 HKGVHFMMADGGFSVEGQENIQEILSKQLLLCQFLVGLSVVRTGGHFICKTFDLFTPFSV 415
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ LL F+++ KP+ SR + E +++ +G ++
Sbjct: 416 GLIYLLYCCFERICLFKPLTSRPANSERYVVCRGLKE 452
>gi|298712535|emb|CBJ26803.1| putative ribosomal RNA methyltransferase 2 [Ectocarpus siliculosus]
Length = 575
Score = 71.7 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 15/137 (10%)
Query: 3 KPPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH 62
+ PG+ V + GSS W+ RH+ DPYV A G +R+A+KL++IN++H
Sbjct: 72 RRPGAGKSGAGGTAVGRATKGGSSGLWMRRHLKDPYVSAAIEAGAPSRAAFKLVEINDRH 131
Query: 63 QILQSNRRIVDLGSSPG---------------SWSQVAARITGSNANNTRVVAIDILDME 107
+L + R + A R G V +
Sbjct: 132 GVLSAGDRAPASRGGGSRGGGAPPALPPPLPEGRLEAAERKGGRGRGAVVVAVDLLDMEA 191
Query: 108 PILGVKFFKFDFLDLDS 124
+ GV+ + DF D +
Sbjct: 192 DLPGVQAIRGDFRDEEV 208
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G FL K F G ++ ++ F++V VKP ASR+ S EM+LLA GF
Sbjct: 520 GTFLGKFFAGRDEREVKEEAERLFERVKVVKPPASRSGSGEMYLLATGF 568
>gi|296198064|ref|XP_002746545.1| PREDICTED: S-adenosyl-L-methionine-dependent methyltransferase
FTSJD2 [Callithrix jacchus]
Length = 835
Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 359 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTFDLFTPFSVGLVY 418
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KP+ SR + E +++ KG +
Sbjct: 419 LLYCCFERVCLFKPITSRPANSERYVVCKGLK 450
>gi|224064131|ref|XP_002187731.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
Length = 764
Score = 71.3 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 32/219 (14%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQIL------QSNRRIVDLGSSPGSWSQVAARITGSN 92
V+++ ++ K +I +L V L +PG++ S+
Sbjct: 102 VKKSVNAELCTQAWCKFHEILCSFSLLPEEALQDGELNSVHLCEAPGAFIASLNHFLKSH 161
Query: 93 ANNTR-------------------VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
++ D L + F + D+ + +
Sbjct: 162 HVPCHWNWVANTLNPYHEANDILMMIMDDRLIANTLPWWYFGPDNTGDVMTLRHLTGLQS 221
Query: 134 G-----NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT 188
LV +D ++ G+ L T AL +L GG F++K F
Sbjct: 222 FVSSMTTVHLVTADGSFDCQGNPGEQEALVSPLHYCETVTALMILGTGGSFVLKMFTLFE 281
Query: 189 --TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ ++L LL F++V KP S+A + E +++ +
Sbjct: 282 HCSINLLFLLNCSFEEVHVFKPATSKAGNSEAYVVCLRY 320
>gi|242015838|ref|XP_002428554.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212513188|gb|EEB15816.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 703
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 70/215 (32%), Gaps = 34/215 (15%)
Query: 47 WRARSAYKLLQIN-------------EKHQILQSNRRI--VDLGSSPGSWSQVAARITGS 91
+ R+A K+ ++ +I+ + D+ + PG +S+
Sbjct: 137 FINRAAMKMANLDAILDWMFTNPVDLNGDKIIDDESLLYFADVCAGPGGFSEYVFFRKKW 196
Query: 92 NANNTRVVAIDILDMEPILGV-----------------KFFKFDFLDLDSWEFIRQAIGG 134
A + D + + + ++ G
Sbjct: 197 RAKGFGFTLRNENDFMLNEFCAGPSETFDPHYGVRGDGDIYVPENIVSFRDHVLQHTDGN 256
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDI 192
+++D P + L L AL ++ GG F+VK F + +
Sbjct: 257 GVHFMMADGGVPIEENFNDQELICKKLYLCQCLVALMIVRTGGHFVVKLFDLFTPFSVGL 316
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ L+ + FQ V +KP SR + E +L+ K R+
Sbjct: 317 VYLMYRSFQSVTIIKPNTSRPANSERYLVCKYKRE 351
>gi|257206228|emb|CAX82765.1| putative calcium channel, voltage-dependent, L type, alpha 1D
subunit [Schistosoma japonicum]
Length = 87
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 31 NRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-----SNRRIVDLGSSPGSWSQVA 85
+R D Y + A+ EGWRARSAYKLLQI++++ IL R+VDL ++PGSWSQV
Sbjct: 5 SRDKRDIYYRLAKEEGWRARSAYKLLQIDDEYGILSSTENIPLERVVDLCAAPGSWSQVL 64
Query: 86 ARITGSNA 93
++ +
Sbjct: 65 SKRLWESK 72
>gi|70929691|ref|XP_736867.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56511773|emb|CAH84861.1| hypothetical protein PC301269.00.0 [Plasmodium chabaudi chabaudi]
Length = 231
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
L ++ +L +GG+F+ K F+G T ++ L K F+K+ KP +SR +S+E F
Sbjct: 1 QLILSSLKVCCSVLKVGGNFISKIFRGEYTGLLIFHLNKFFEKIYVCKPQSSRNKSLESF 60
Query: 220 LLAKGF 225
L+ F
Sbjct: 61 LVCLNF 66
>gi|47087401|ref|NP_998598.1| ftsJ methyltransferase domain-containing protein 1 [Danio rerio]
gi|82188695|sp|Q7ZVS8|FTSJ1_DANRE RecName: Full=FtsJ methyltransferase domain-containing protein 1
gi|28278354|gb|AAH45425.1| Zgc:55686 [Danio rerio]
Length = 743
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 71/208 (34%), Gaps = 32/208 (15%)
Query: 51 SAYKLLQINEKHQIL-----QSNR-RIVDLGSSPGSWSQVAARITGSN------------ 92
+ K +I Q+L ++ + L +PG++ ++
Sbjct: 118 AWAKFYEILGTFQLLPDSALKTGELNSIHLCEAPGAFISALNHFLKTSSLHCDWNWIANT 177
Query: 93 -------ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDL-----VL 140
+ D L + + F + D+ + + + ++ V
Sbjct: 178 LNPYYEANGRGCTITDDRLIVHTLPWWFFGSDNTGDIMLQKHLLELPRFVSNMRSVDLVT 237
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND--ILCLLKK 198
+D ++ G L AL +L GG F++K F + +L LL
Sbjct: 238 ADGSFDCQGDPGEQERLVAPLQHCEAICALLLLGTGGSFVLKMFTLFEHSSVCLLYLLAC 297
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP S++ + E++++ ++
Sbjct: 298 CFRSVNIFKPGTSKSGNSELYIVCLDYQ 325
>gi|195383788|ref|XP_002050607.1| GJ22245 [Drosophila virilis]
gi|194145404|gb|EDW61800.1| GJ22245 [Drosophila virilis]
Length = 702
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 62/208 (29%), Gaps = 31/208 (14%)
Query: 51 SAYKLLQINEKHQIL-QSNRRIVDLGSSPGSW---------------------------S 82
+ K+ + + ++ Q + L +PG++
Sbjct: 98 AWCKIFECLHRFPLVTQPELNSLHLCEAPGAFVAALNHYLHSVYKQDEIKWCWRSTTLNP 157
Query: 83 QVAARITGSNANNTRVVAIDILDMEPILGVK-FFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
+ R + + + E L+ +
Sbjct: 158 YYEGNALNEMITDDRFIFHTLDNWLFHKDFTGNLLDVANIEHMTERCANDFPAGVQLITA 217
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + L A AL +L+ G+F++K F + ++ +L
Sbjct: 218 DGSIDCSAQPDCQEEIVARLLFAEILSALSILSACGNFVIKMFTLFEACSVSVMYMLNCV 277
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
FQ+V KP S+ + E++++ ++K
Sbjct: 278 FQRVHIYKPATSKRGNSEVYVICLNYQK 305
>gi|321463616|gb|EFX74631.1| hypothetical protein DAPPUDRAFT_307206 [Daphnia pulex]
Length = 742
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 72/213 (33%), Gaps = 36/213 (16%)
Query: 47 WRARSAYKLLQINEKHQI-------------LQSNRRI--VDLGSSPGSWSQVAARITGS 91
+ R+A K+ ++ L N + D+ + PG +S+
Sbjct: 135 FLNRAAMKMANMDAVFDFMFTDPRNEDGTPVLGPNELLYFADVCAGPGGFSEYILWRKKW 194
Query: 92 NANNTRVVAIDILDM----------------EPILGVKFFKFDFLDLDSWEFIRQAIGGN 135
A D + GV+ + + EF R +
Sbjct: 195 EAKGFGFTLKSSNDFKLEDFHAAPCECFEPHYGVGGVEGNGDVYNPENIREFQRFVMAQT 254
Query: 136 PDLV---LSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTN 190
+ V ++D + G + + + L AL ++ GG F+ K F +
Sbjct: 255 GEGVHFMMADGGFSVEGQENLQEILSKRLYLCQFLVALSIVRTGGHFVCKLFDLFTPFSA 314
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
++ L+ + F+++ KP SR + E +++ K
Sbjct: 315 GLVYLMYRSFKQISIHKPNTSRPANSERYIICK 347
>gi|213019910|ref|ZP_03335699.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia endosymbiont of Culex quinquefasciatus JHB]
gi|212994501|gb|EEB55160.1| ribosomal RNA large subunit methyltransferase J, putative
[Wolbachia endosymbiont of Culex quinquefasciatus JHB]
Length = 61
Score = 70.6 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 44/55 (80%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
ND YVQ+ +G+R+RSAYKL++I++K ++LQ ++I+DLG+ PG WSQVA + T
Sbjct: 2 NDQYVQKTNKDGYRSRSAYKLIEIDDKFKLLQQGQKIIDLGAFPGGWSQVAPQFT 56
>gi|47224577|emb|CAG03561.1| unnamed protein product [Tetraodon nigroviridis]
Length = 768
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G I + + L AL + GG F+ KTF + ++
Sbjct: 280 HCLMADGGFSVEGQENIQEVLSKQLLLCQFLTALSTVRTGGHFVCKTFDLFTPFSVGLIY 339
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F+++ KPV SR + E +++ +G +
Sbjct: 340 LLYLCFERISLFKPVTSRPANSERYVVCRGLK 371
>gi|195029559|ref|XP_001987639.1| GH22026 [Drosophila grimshawi]
gi|193903639|gb|EDW02506.1| GH22026 [Drosophila grimshawi]
Length = 693
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 31/208 (14%)
Query: 51 SAYKLLQINEKHQILQ-SNRRIVDLGSSPGSWSQVAARITGSNANNTRV----------- 98
+ K + ++ +++ + L +PG++ S + V
Sbjct: 98 AWCKFFECLHRYPLVKQPQLNTLHLCEAPGAFIAALNHYLHSVYKHDEVKWRWRSTTLNP 157
Query: 99 ----------VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-------PDLVLS 141
+ D + F K +L + + I L+ +
Sbjct: 158 YYEGNALNEMITDDRFIFHTLDNWLFHKDLTGNLLNVDNIEHMTKRCAEDLLDEVHLITA 217
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKH 199
D + L A AL +L GG+F++K F + ++ LL
Sbjct: 218 DGSIDCSAQPDCQEELVARLFVAEIISALNILKDGGNFVIKMFTLFEACSVSLIYLLNCI 277
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFRK 227
F+ V KP S+ + E++++ ++K
Sbjct: 278 FRAVHIYKPATSKRGNSEVYVICMDYQK 305
>gi|149549695|ref|XP_001511215.1| PREDICTED: similar to hCG1812157 [Ornithorhynchus anatinus]
Length = 853
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L L ++ GG F+ K+F + +L
Sbjct: 359 HFLMADGGFSVKGQHNLQEILSKQLLLCQFLTGLSLVRTGGHFICKSFDLFTPFSVGLLY 418
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KPV SR + E +++ K +
Sbjct: 419 LLYCCFERVSLFKPVTSRPANSERYVVCKSLK 450
>gi|126305175|ref|XP_001375930.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 814
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 69/207 (33%), Gaps = 32/207 (15%)
Query: 51 SAYKLLQINEKHQI-----LQSNR-RIVDLGSSPGSWSQVAARITGSNANNT-------- 96
+ K ++ + Q+ V L +PG++ S+
Sbjct: 114 AWCKFHEVLCSFPLIPQEAFQNGELNSVHLCEAPGAFIASLNHYLRSHNIPCDWNWVANT 173
Query: 97 -----------RVVAIDILDMEPILGVKFFKFDFLDLDSWE-----FIRQAIGGNPDLVL 140
++ D L + F + D+ + + + LV
Sbjct: 174 LNPYHEANDNLMMIMDDRLIANTLPWWYFGPDNTGDIMTLKHLTGLQHFISNMSTVHLVT 233
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKK 198
+D ++ G+ L AL L GG F++K F + +++ LL
Sbjct: 234 ADGSFDCQGNPGEQEALVSPLHYCEVVTALMTLGNGGSFVLKMFTLFEHCSINLMYLLNC 293
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGF 225
F+++ KP S+A + E++++ +
Sbjct: 294 SFEEIHVFKPATSKAGNSEVYVVCLYY 320
>gi|194383894|dbj|BAG59305.1| unnamed protein product [Homo sapiens]
Length = 726
Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 174 NIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
GG F+ K F+ +L + ++ F++V KP ASR ES E+F++ +GF
Sbjct: 28 QCGGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRRESAEIFVVCQGF 79
>gi|297273385|ref|XP_002800609.1| PREDICTED: putative rRNA methyltransferase 3-like [Macaca mulatta]
Length = 722
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 174 NIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
GG F+ K F+ +L + ++ F++V KP ASR ES E+F++ +GF
Sbjct: 28 QCGGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGF 79
>gi|10434996|dbj|BAB14452.1| unnamed protein product [Homo sapiens]
Length = 586
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILC 194
LV +D ++ G+ SL AL L GG F++K F + +++
Sbjct: 46 HLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFEHCSINLMY 105
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F +V KP S+A + E++++ ++
Sbjct: 106 LLNCCFDQVHVFKPATSKAGNSEVYVVCLHYK 137
>gi|125982897|ref|XP_001355214.1| GA19551 [Drosophila pseudoobscura pseudoobscura]
gi|54643527|gb|EAL32271.1| GA19551 [Drosophila pseudoobscura pseudoobscura]
Length = 785
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
E+IR+ ++D + G I + + L AL++L G+F+ K F
Sbjct: 282 EYIRRHTPDGVHFAMADGGFSVEGEENIQEILSKQLYLCQFLTALKILRKNGNFVCKVFD 341
Query: 186 --GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
+ ++ L+ K F ++ +KP +SR + E +L+ K +++
Sbjct: 342 LFTPFSVGLIYLMYKCFHQIAIIKPNSSRPANSERYLVCK-YKQ 384
>gi|170042033|ref|XP_001848746.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167865569|gb|EDS28952.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 769
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/208 (14%), Positives = 73/208 (35%), Gaps = 33/208 (15%)
Query: 49 ARSAYKLLQINEKHQ-------------ILQSNRRI--VDLGSSPGSWSQV-------AA 86
R+A K+ ++ +++ + + D+ + PG +S+ A
Sbjct: 156 NRAAVKMANMDSMFDYMFTSPVDGAGNSLVKDSDLLYFADVCAGPGGFSEYFLWRKKWLA 215
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE---------FIRQAIGGNPD 137
+ G ++ + + D ++ ++ +
Sbjct: 216 KGFGFTLKECNDFKLEDFKAGTPETFDTYYGPKENGDVFDPENIQAFADYVLRQTETGVH 275
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCL 195
++++D + G + + L AL ++ G F+VK F + ++ L
Sbjct: 276 VMMADGGFSVEGRENEQEILSKQLYLCQILVALSIVRTEGHFVVKLFDLFTPFSVGLIYL 335
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAK 223
+ K F+K+ KP SR + E +L+ K
Sbjct: 336 VSKCFKKISICKPNTSRPANSERYLVCK 363
>gi|91092006|ref|XP_970361.1| PREDICTED: similar to adrift CG5032-PA [Tribolium castaneum]
Length = 540
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 39/237 (16%)
Query: 28 DWLNRH--INDP------YVQRAQLEGWRARSAYKLLQINEKHQILQS------NRRIVD 73
+W +RH DP +V++ ++ K + ++
Sbjct: 61 EW-SRHTKHRDPSSYITRFVKQKFHPELVTQAWCKFYECLCSFNVIPKEAITSSRFTSFH 119
Query: 74 LGSSPGSWSQVAARITGSNA-NNTRVVAIDILDMEPILGV--KFFKFDFLDLDSWEFIR- 129
L +PG++ S + + L+ + + D L +++
Sbjct: 120 LCEAPGAFISALNHYIASQGLDVQWTWGANTLNPDHEGNSPQEMIPDDRLLRHTYKNWYF 179
Query: 130 ------------------QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
+ I LV +D + L T AL
Sbjct: 180 GSDFTGNVTKYCNHVDLVEKIHEKVWLVTADGSIDCSSDPGNQESHVEFLHYCETLTALA 239
Query: 172 MLNIGGDFLVKTFQGGTTND--ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L GG F++K F + +L LL F KV KP +S++ + E++++ + F+
Sbjct: 240 LLKPGGSFVLKIFTMFEHSTICLLYLLNVCFGKVSLFKPGSSKSGNSEVYVICQHFK 296
>gi|195048585|ref|XP_001992557.1| GH24820 [Drosophila grimshawi]
gi|193893398|gb|EDV92264.1| GH24820 [Drosophila grimshawi]
Length = 793
Score = 70.2 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ 185
+IR+ ++D + G I + + L AL++L + G F+ K F
Sbjct: 284 NYIRKHTPHGVHFAMADGGFSVEGQENIQEILSKQLYLCQFVTALKILRVNGSFVCKLFD 343
Query: 186 --GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ ++ L+ K F ++ +KP +SR + E +++ K
Sbjct: 344 LFTPFSVGLVYLMYKCFNQIAIIKPNSSRPANSERYIVCKNK 385
>gi|221041826|dbj|BAH12590.1| unnamed protein product [Homo sapiens]
Length = 192
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 164 AATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
A A +L GG F+ K F+G + L+ F V+ KP +SR S+E F + +
Sbjct: 1 MALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVCQ 60
Query: 224 GF 225
G+
Sbjct: 61 GY 62
>gi|302758758|ref|XP_002962802.1| hypothetical protein SELMODRAFT_438129 [Selaginella moellendorffii]
gi|300169663|gb|EFJ36265.1| hypothetical protein SELMODRAFT_438129 [Selaginella moellendorffii]
Length = 639
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILC 194
D+VL D + G + + SL + A + L G F+ K F+ N +
Sbjct: 49 MVDVVLHDGSPNVGGAWAKEAMTQSSLVLDSLKLATKFLAPKGTFVTKVFRSQDYNALKY 108
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ F KV ASR+ S E++++ +
Sbjct: 109 AFEQLFAKVEV----ASRSTSAEIYVVGLKY 135
>gi|332848817|ref|XP_003315726.1| PREDICTED: putative rRNA methyltransferase 3 isoform 2 [Pan
troglodytes]
Length = 726
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 174 NIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
GG F+ K F+ +L + ++ F++V KP ASR ES E+F++ +GF
Sbjct: 28 QCGGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGF 79
>gi|195564988|ref|XP_002106089.1| GD16313 [Drosophila simulans]
gi|194203460|gb|EDX17036.1| GD16313 [Drosophila simulans]
Length = 503
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 130 QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GG 187
++D + G + I + + L AL++L G F+ K F
Sbjct: 1 MHTPQGVHFAMADGGFSVEGQKNIQEILSKQLYLCQFLTALKILRPNGSFVCKLFDLFTP 60
Query: 188 TTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++ L+ + FQ++ +KP +SR + E +L+ K R
Sbjct: 61 FSVGLVYLMYQCFQQIAIIKPNSSRPANSERYLVCKYKR 99
>gi|126309943|ref|XP_001379203.1| PREDICTED: similar to KIAA0082 [Monodelphis domestica]
Length = 1414
Score = 69.8 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + + + + L L ++ GG F+ KTF + ++
Sbjct: 938 HFMMADGGFSVEKQENLQEILSKQLLLCQFLTGLSVIRTGGHFICKTFDLFTPFSVGLIY 997
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LL F++V KPV SR + E +++ K +
Sbjct: 998 LLYTCFERVSLFKPVTSRPANSERYVVCKSLK 1029
>gi|157114675|ref|XP_001652367.1| hypothetical protein AaeL_AAEL006950 [Aedes aegypti]
gi|108877186|gb|EAT41411.1| conserved hypothetical protein [Aedes aegypti]
Length = 857
Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 75/211 (35%), Gaps = 33/211 (15%)
Query: 49 ARSAYKLLQINEKHQ-------------ILQSNRRI--VDLGSSPGSWSQV---AARITG 90
R+A K+ ++ +++ N + D+ + PG +S+ +
Sbjct: 235 NRAAVKMANMDAMFDYMFTNPVDEDGNSLVRDNDLVYFADVCAGPGGFSEYFLWRKKWQA 294
Query: 91 SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW-------------EFIRQAIGGNPD 137
T D + I G + ++ +++ +
Sbjct: 295 KGFGFTLRGENDFKLSDFIAGTPESFDPYYGPNNDGDVFNPVNIERFTDYVMKQTELGVH 354
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCL 195
++++D + I + + L AL ++ GG F+VK F + ++ L
Sbjct: 355 VMMADGGFSVENQENIQEILSKRLYLCQILMALNVVRTGGHFVVKLFDLFTPFSVGLIYL 414
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K F+K+ KP SR + E +L+ K +
Sbjct: 415 VYKCFKKICICKPNTSRPANSERYLVCKWKK 445
>gi|195133504|ref|XP_002011179.1| GI16152 [Drosophila mojavensis]
gi|193907154|gb|EDW06021.1| GI16152 [Drosophila mojavensis]
Length = 1022
Score = 69.4 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 77/210 (36%), Gaps = 33/210 (15%)
Query: 47 WRARSAYKLLQIN--EKHQILQSNRR-------------IVDLGSSPGSWSQVAARITG- 90
+ R+A K+ I+ ++ + D+ + PG +S+
Sbjct: 377 FLNRAAVKMANIDSLCQYMFTDPRDKNGQSLIGPNELLYFADMCAGPGGFSEYVLYRKSW 436
Query: 91 ------------SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW---EFIRQAIGGN 135
++ + A + GVK F + ++IR+
Sbjct: 437 EARGFGFTLRGSNDFKLEKFFAASPESFDTFYGVKDDGDIFNTSNQNSLNDYIRKHTPQG 496
Query: 136 PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDIL 193
++D + G I + + L AL++L +GG F+ K F + ++
Sbjct: 497 VHFAMADGGFSVEGQENIQEILSKQLYLCQFNTALKILRVGGSFVCKLFDLFTPFSVSLV 556
Query: 194 CLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
L+ K FQ++ +KP +SR + E +++ K
Sbjct: 557 YLMYKCFQQIAILKPNSSRPANSERYIICK 586
>gi|261332886|emb|CBH15881.1| methyltransferase, putative [Trypanosoma brucei gambiense DAL972]
Length = 370
Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 70/206 (33%), Gaps = 27/206 (13%)
Query: 47 WRARSAYKLLQINEKHQI---LQSN-------RRIVDLGSSPGSWSQVAARITGSNANNT 96
+R R+ +KL + E + L+ VD+ PG++SQ + +
Sbjct: 88 FRNRAGHKLHETMEAVGLWEYLKGGATRAKGTFTFVDVCGGPGAFSQALFAMGKEHKLRL 147
Query: 97 RVVAIDILDMEPILGVKFFKFDFLDLD--------------SWEFIRQAIGGNPDLVLSD 142
R + + +++ + N LV++D
Sbjct: 148 RGFGLTLRNVKGLDWYTDLPSRSFFPCYGIDGTGNVFKLENIESLCSLTCKENVRLVVAD 207
Query: 143 MAYPT-IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKH 199
+ + + A+++L GG F++K F T IL L
Sbjct: 208 GGFDVPTEVVNFQETISCRIVYGQWLSAVKLLRPGGCFVLKLFDCFSPFTRAILFLTTHL 267
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
++ V VKP SR + E +L+ GF
Sbjct: 268 YESVQVVKPRHSRVVNSERYLVCIGF 293
>gi|71747946|ref|XP_823028.1| methyltransferase [Trypanosoma brucei TREU927]
gi|122078440|sp|Q38AH0|MTR1_TRYBB RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1;
Short=TbMTr1
gi|70832696|gb|EAN78200.1| methyltransferase, putative [Trypanosoma brucei]
Length = 370
Score = 69.0 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 70/206 (33%), Gaps = 27/206 (13%)
Query: 47 WRARSAYKLLQINEKHQI---LQSN-------RRIVDLGSSPGSWSQVAARITGSNANNT 96
+R R+ +KL + E + L+ VD+ PG++SQ + +
Sbjct: 88 FRNRAGHKLHETMEAVGLWEYLKGGATRAKGTFTFVDVCGGPGAFSQALFAMGKEHKLRL 147
Query: 97 RVVAIDILDMEPILGVKFFKFDFLDLD--------------SWEFIRQAIGGNPDLVLSD 142
R + + +++ + N LV++D
Sbjct: 148 RGFGLTLRNVKGLDWYTDLPSRSFFPCYGIDGTGDVFKLENIESLCSLTCKENVRLVVAD 207
Query: 143 MAYPT-IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKH 199
+ + + A+++L GG F++K F T IL L
Sbjct: 208 GGFDVPTEVVNFQETISCRIVYGQWLSAVKLLRPGGCFVLKLFDCFSPFTRAILFLTTHL 267
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
++ V VKP SR + E +L+ GF
Sbjct: 268 YESVQVVKPRHSRVVNSERYLVCIGF 293
>gi|302841276|ref|XP_002952183.1| hypothetical protein VOLCADRAFT_62343 [Volvox carteri f.
nagariensis]
gi|300262448|gb|EFJ46654.1| hypothetical protein VOLCADRAFT_62343 [Volvox carteri f.
nagariensis]
Length = 273
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 33/194 (17%)
Query: 66 QSNRRIVDLGSSPGSWSQVAARITGSNANNTR-------------------VVAIDILDM 106
+ V L +PG++ ++ N R ++ D L
Sbjct: 58 KPGVVSVHLCEAPGAFIAATNHFVKTHRQNWRWDWMAVSLNPYCEANDKFAMIEDDALIA 117
Query: 107 EPILGVKF-------FKFDFLDLDSWEFIRQAIGGNPD-----LVLSDMAYPTIGHRKID 154
+ F + W+ ++ +V +D A T
Sbjct: 118 ATMPNWCFGADNTGDIRRISNIQAIWDRGKELCTRMGCPGGVLMVTADGAVDTSMDPNRQ 177
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASR 212
+ T SL AL +L +GG+F+ K F I L L+ F KV+ KP S+
Sbjct: 178 EMITASLHYCEVVAALGLLAVGGNFVWKGFTLYEHPSICSLFLMGCLFDKVLVYKPATSK 237
Query: 213 AESVEMFLLAKGFR 226
+ E++++ KGFR
Sbjct: 238 PANSEVYVVGKGFR 251
>gi|270000765|gb|EEZ97212.1| hypothetical protein TcasGA2_TC011004 [Tribolium castaneum]
Length = 608
Score = 69.0 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 39/237 (16%)
Query: 28 DWLNRH--INDP------YVQRAQLEGWRARSAYKLLQINEKHQILQS------NRRIVD 73
+W +RH DP +V++ ++ K + ++
Sbjct: 61 EW-SRHTKHRDPSSYITRFVKQKFHPELVTQAWCKFYECLCSFNVIPKEAITSSRFTSFH 119
Query: 74 LGSSPGSWSQVAARITGSNA-NNTRVVAIDILDMEPILGV--KFFKFDFLDLDSWEFIR- 129
L +PG++ S + + L+ + + D L +++
Sbjct: 120 LCEAPGAFISALNHYIASQGLDVQWTWGANTLNPDHEGNSPQEMIPDDRLLRHTYKNWYF 179
Query: 130 ------------------QAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
+ I LV +D + L T AL
Sbjct: 180 GSDFTGNVTKYCNHVDLVEKIHEKVWLVTADGSIDCSSDPGNQESHVEFLHYCETLTALA 239
Query: 172 MLNIGGDFLVKTFQGGTTND--ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+L GG F++K F + +L LL F KV KP +S++ + E++++ + F+
Sbjct: 240 LLKPGGSFVLKIFTMFEHSTICLLYLLNVCFGKVSLFKPGSSKSGNSEVYVICQHFK 296
>gi|146277080|ref|YP_001167239.1| hypothetical protein Rsph17025_1033 [Rhodobacter sphaeroides ATCC
17025]
gi|145555321|gb|ABP69934.1| hypothetical protein Rsph17025_1033 [Rhodobacter sphaeroides ATCC
17025]
Length = 57
Score = 68.6 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K GG N++ LLKK+F KV +VKP ASRA+S E F++A GFR
Sbjct: 1 MAKVLAGGAENELQALLKKNFTKVANVKPPASRADSSEKFVVAMGFR 47
>gi|85000303|ref|XP_954870.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65303016|emb|CAI75394.1| hypothetical protein, conserved [Theileria annulata]
Length = 1007
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 18/193 (9%)
Query: 51 SAYKLLQINEKHQI---LQSNRRI-------VDLGSSPGSWSQVAARITGSNANNTRV-- 98
+ K +I E +++ L+ N + + PG++ S N +
Sbjct: 152 AWLKFYEILEVYKLVEYLKPNFKTEGGTLTSFHISECPGAFIASLNHNLKSKNYNGELKW 211
Query: 99 --VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG--GNPDLVLSDMAYPTIGHRKID 154
+++ V + L ++ +D ++
Sbjct: 212 YATSLNPYYEGNNHNVVLAEDILLKETYQNWLLGYDNSGNITKSSTADGSFNCQFDPNNQ 271
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASR 212
L T L A AL +L +GG F++K F + I+ LL F+++ KP SR
Sbjct: 272 ELLTSPLKFAEVVCALGLLRVGGCFIIKMFNLFEEPSMSIIALLSLCFKRLEVYKPFLSR 331
Query: 213 AESVEMFLLAKGF 225
+ E++++ F
Sbjct: 332 EANSEVYVICLDF 344
Score = 40.5 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 42/116 (36%), Gaps = 3/116 (2%)
Query: 114 FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCE-AATFFALEM 172
F E + + N D + D+ + A AL
Sbjct: 745 FNSNQSYKSLIGEILESNLKRNCDFIFCDLYNNVNYRELLYKELNTKYILVAQLIQALNC 804
Query: 173 LNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LN GD +++ F T ILC L F +VI +P + S E+F++ K ++
Sbjct: 805 LNDNGDLVLRIFSMFTRFTVGILCCLSTVFDQVILYRPESVVNWSQELFVICKNYK 860
>gi|308499046|ref|XP_003111709.1| hypothetical protein CRE_02812 [Caenorhabditis remanei]
gi|308239618|gb|EFO83570.1| hypothetical protein CRE_02812 [Caenorhabditis remanei]
Length = 663
Score = 67.5 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/210 (19%), Positives = 66/210 (31%), Gaps = 35/210 (16%)
Query: 51 SAYKLLQINEKHQILQSN----RRIVDLGSSPGSWSQVA------ARITGSNANNTRVVA 100
+ K+ +I + + + R L PG + R ++
Sbjct: 99 AFLKMREILREIRFESPSERGPMRSFHLCEGPGYFIDAVYMALLEERRGTEEDIKNKLWE 158
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG-----------------------GNPD 137
+ P + +D R G+ D
Sbjct: 159 WGANTLNPYFENESCFKKLIDDSHIREHRDRWFFGPSDDGDVKKLTEDYLIKNELAGSFD 218
Query: 138 LVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT--FQGGTTNDILCL 195
LV +D + T G SL A AL +L G ++K F T D++ L
Sbjct: 219 LVTADGSTDTQGQEGQIEEVVASLIRAEVEAALILLRKNGRLILKVYRFCALDTQDVMML 278
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L +F + KP ASR S E +++ +GF
Sbjct: 279 LADNFGSIRVFKPKASRPGSSEKYVICEGF 308
>gi|328717828|ref|XP_001943568.2| PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
1-like [Acyrthosiphon pisum]
Length = 927
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 35/212 (16%)
Query: 47 WRARSAYKLLQIN--EKHQILQSNRR--------------IVDLGSSPGSWSQVA----- 85
++ R+A K+ I+ D+ + PG +S+
Sbjct: 338 FQNRAAMKMANIDWACDFMFTDPKYNDGSSMLTSPSSLLYFADICAGPGGFSEYVLWRKS 397
Query: 86 --ARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE----------FIRQAIG 133
A+ G N ++ + F D D ++ ++ G
Sbjct: 398 WKAKGVGFTLRNANDFKLNDFYAGSPESFEAFYGHDEDGDVYKPKNILSLERYVMKMTEG 457
Query: 134 GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTND 191
V++D + G + + L AL +L GG F+ K F +
Sbjct: 458 KGVHFVMADGGFSVDGQESFQEILSKRLYLCQALAALSILQPGGHFMCKLFDIFTEFSAG 517
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
+L LL + F+++ KPV SR + E +++ K
Sbjct: 518 LLFLLYQSFKQISIYKPVTSRPANSERYVICK 549
>gi|326433791|gb|EGD79361.1| hypothetical protein PTSG_09772 [Salpingoeca sp. ATCC 50818]
Length = 2151
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLL 196
+D + + L L L+ GG ++K F T +L LL
Sbjct: 375 FTADGSVDCQHDPNEQEMIVAQLHYCEAVAGLGCLDQGGAMVLKMFTLFEHPTIALLYLL 434
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ F +V KP SRA + E +++AKGF
Sbjct: 435 RSLFDEVWVTKPACSRASNAETYIVAKGF 463
>gi|326433933|gb|EGD79503.1| hypothetical protein PTSG_12990 [Salpingoeca sp. ATCC 50818]
Length = 2112
Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTN 190
G DL +D A+ + T L L L+ GG ++K F +T
Sbjct: 432 HGPVDLFTADGAFDVSANPGEQEALTSHLHFCEAVAGLGCLSPGGAIVLKLFTACERSTA 491
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ L+ HF + KP S+A + E +L+AKGFR
Sbjct: 492 ALIYLVGCHFDETYICKPATSKAANSETYLVAKGFR 527
>gi|157127278|ref|XP_001654901.1| hypothetical protein AaeL_AAEL010786 [Aedes aegypti]
gi|108872969|gb|EAT37194.1| conserved hypothetical protein [Aedes aegypti]
Length = 520
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 76/226 (33%), Gaps = 36/226 (15%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ--ILQSN-----RRIVDLGSSPGS 80
W R+ ++P+ +A + R+A K+ ++ + Q VD+ PG
Sbjct: 88 RW-ARNRSNPFDVKAGQ--FMTRAAVKIANVDAIFGWQLCQRGESDDLMYFVDVFGGPGG 144
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKF--------------------FKFDFL 120
S+ + ++ N + F F + +
Sbjct: 145 CSEYV--LWRNDGWNAKGFGFSTKGDYEFHPEMFRMGAPESFDPFYGANDEGNIFDPENV 202
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
Q L++ D + + + L A+ ++ GG+ +
Sbjct: 203 ASFVEYVKSQTDRLGAHLIMCDGGFFVKN--NCQEIISKQLYLCLVLLAVAVIRPGGNAI 260
Query: 181 VKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+K F + ++ +L K + KV VKP +SR + E +L+ +
Sbjct: 261 LKVFDLYTSFSVGLVYILTKSYGKVSIVKPASSRPANSERYLVCQN 306
>gi|157114165|ref|XP_001652191.1| hypothetical protein AaeL_AAEL006747 [Aedes aegypti]
gi|108877425|gb|EAT41650.1| conserved hypothetical protein [Aedes aegypti]
Length = 703
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--G 186
R +LV +D + + + L A AL++L G F++K F
Sbjct: 234 RSKDFPMINLVTADGSIDCLDVPEAQEEHVSKLHLAEAVTALKILTTDGCFILKMFTFFE 293
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ D+L LL F+++ KP S+ + E++++AK FRK
Sbjct: 294 HSSVDLLYLLYVCFRELHVFKPATSKPGNSEVYVIAKYFRK 334
>gi|324525209|gb|ADY48522.1| Ribosomal RNA methyltransferase [Ascaris suum]
Length = 121
Score = 66.7 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 106 MEPILGVKFFKF-DFLDLDSWEFIRQAIGGN-PDLVLSDMAYPTIGHRKIDHLRTMSLCE 163
M P+ GV D ++ I+Q + G D V+SDMA G + +DH R ++LCE
Sbjct: 1 MVPLAGVDLITMADITSPETHHRIKQYLSGRSVDAVVSDMAPNPSGDKTVDHERIIALCE 60
Query: 164 AATFFALEML-----NIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
F GG FL K + G ++ LK +F V ++KP ASR S E+
Sbjct: 61 QLLSFCCGNAAVIPLKKGGTFLCKIWDGQRRLQLIESLKGYFHIVHNIKPDASRDHSAEL 120
Query: 219 F 219
+
Sbjct: 121 Y 121
>gi|156548314|ref|XP_001602770.1| PREDICTED: similar to FLJ11171 protein [Nasonia vitripennis]
Length = 706
Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 82/231 (35%), Gaps = 44/231 (19%)
Query: 40 QRAQLEGWRAR----------SAYKLLQINEKH------QILQSNRRIV--DLGSSPGSW 81
+A+ WR R + K +I K I +N +++ L +PG++
Sbjct: 101 NKAKDVEWRVRKEFDPEFVTQAWCKFHEIVSKFSLVPRENIFANNNKLLSLHLCEAPGAF 160
Query: 82 SQVAARITG-------------------SNANNTRVVAIDILDMEPILGVKFFKFDFLDL 122
+N ++++ D M + F K + +L
Sbjct: 161 ITCLNHWLKTNMPTVHWNWLAMTFNPYYEGNSNAKMISDDRFIMHTLNNWFFGKDNTGNL 220
Query: 123 DSWE-----FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
+ E + G +L+ +D + I + SL + A+ +L GG
Sbjct: 221 MTIENLEALIEKAKAKGKVNLITADGSVNCISNPGEQEGIVTSLHFSEVLAAMHILEAGG 280
Query: 178 DFLVKTFQGGTTND--ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ L+K F ++ L F+ ++ KPV S+ + E +++ F+
Sbjct: 281 NLLIKIFTVFEHQSICLIYFLSCVFKNIMFYKPVTSKEGNSETYMICLNFK 331
>gi|312383048|gb|EFR28279.1| hypothetical protein AND_04009 [Anopheles darlingi]
Length = 841
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 60/190 (31%), Gaps = 21/190 (11%)
Query: 58 INEKHQILQSNRRIVD---LGSSPGSWSQVAARITG---SNANNTRVVAIDILDMEPILG 111
++ Q+ + + + PG +S+ G T D I G
Sbjct: 136 LDRHGQLFVKEDEVFFFADVCAGPGGFSEYILWRKGWRAKGFGFTLRGENDFKLDGFIAG 195
Query: 112 VK-------------FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRT 158
E++ + L+++D I +
Sbjct: 196 TPETFDPYYGPNDDGNIYDPANIDGFSEYVLRQTNTGVHLMVADGGISVKNEENIQEILL 255
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESV 216
L AL+++ G ++K F + ++ LL + F ++ KP +SR +
Sbjct: 256 KQLYLCQVIVALDIVRPNGSLVLKVFDQFTPFSVGLVYLLYRCFGQISICKPNSSRPANS 315
Query: 217 EMFLLAKGFR 226
E +++ K +
Sbjct: 316 ERYIVCKWKK 325
>gi|170052241|ref|XP_001862132.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873157|gb|EDS36540.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 556
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILC 194
+LV +D + + + L A AL+ML GG F++K F + D+L
Sbjct: 29 NLVTADGSIDCLDVPESQEEHVAPLHLAEAVTALKMLTRGGSFILKMFTMFEHTSVDLLY 88
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
LL F ++ KP S+ + E++++AKG+R+
Sbjct: 89 LLYVCFDELNVFKPCTSKPGNSEVYVIAKGYRR 121
>gi|198416583|ref|XP_002121479.1| PREDICTED: similar to Uncharacterized protein FLJ11171 [Ciona
intestinalis]
Length = 768
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 113 KFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEM 172
FK +F+D S + LV +D + L AL++
Sbjct: 192 DVFKPEFMDSLSAHCHNEFDDATIGLVTADGSLNCADKPGEQETVVAPLHHVEMLDALQL 251
Query: 173 LNIGGDFLVKTFQGGTTND--ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L GG F++K F + I+ LL F++V +KP S+A + E++++ + +
Sbjct: 252 LCSGGTFVMKMFTLFEVHSASIMYLLCCLFEEVSVIKPATSKAGNSEVYVVCRNY 306
>gi|209879978|ref|XP_002141429.1| ribosomal RNA large subunit methyltransferase J domain-containing
protein [Cryptosporidium muris RN66]
gi|209557035|gb|EEA07080.1| ribosomal RNA large subunit methyltransferase J domain-containing
protein [Cryptosporidium muris RN66]
Length = 1170
Score = 66.3 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 6/135 (4%)
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+ RV + I D I + + S DLV +D + T +
Sbjct: 196 DTYRVWNMGIDDSGDITNCDNIHY----IWSKTSKNTKSCWLADLVTADGSIDTQYNPNE 251
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVAS 211
T + L +L G +VK F TT +L LL F +V VKPV S
Sbjct: 252 QEQLTSCIQYCEVVCGLGILRKHGSLIVKCFNIFHHTTISLLALLYYCFNQVHIVKPVMS 311
Query: 212 RAESVEMFLLAKGFR 226
+ + E++++A F+
Sbjct: 312 KGGNSEVYIVALNFQ 326
>gi|316977931|gb|EFV60968.1| putative ribosomal RNA large subunit methyltransferase J
[Trichinella spiralis]
Length = 770
Score = 65.9 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 76/221 (34%), Gaps = 41/221 (18%)
Query: 47 WRARSAYKLLQINE--KHQILQSNR-----------------RIVDLGSSPGSWSQVAAR 87
++ R+A KL ++ Q+ D+ S PG +++
Sbjct: 213 FQNRAAIKLANLDALVDFQLTDPKDADGNSIVPNVAEYPELFYFADVCSGPGGFTEYVLW 272
Query: 88 ITGSNANNTRVVAIDILDMEPIL-----GVKFFKFDFLDLDSWEFI-------------- 128
G NA+ + + D V F F D +
Sbjct: 273 KRGWNAHGFGMTLRNDCDFRLDKFTASSPVMFEAFYGEDGIDGDGDITKGSNLESFSNFV 332
Query: 129 -RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG- 186
+ L ++D + +G + + + + + L +L GG FL K F
Sbjct: 333 LKNTDQKGVHLFMADGGFSVVGEEILQEVLSKRIYLCQSLCGLLVLRKGGTFLCKFFDTF 392
Query: 187 -GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
T D++CLL F K+ KP +SR + E +++ GFR
Sbjct: 393 TPFTVDLICLLWHCFDKLTLHKPHSSRPGNSEKYVIGIGFR 433
>gi|66362924|ref|XP_628428.1| adrift-like. FTSJ family RNA methylase [Cryptosporidium parvum Iowa
II]
gi|46229458|gb|EAK90276.1| adrift-like. FTSJ family RNA methylase [Cryptosporidium parvum Iowa
II]
Length = 1188
Score = 65.9 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 67/218 (30%), Gaps = 43/218 (19%)
Query: 52 AYKLLQINEKHQ----ILQSNRRIVDLGSSPGSWSQVA-----------ARITGSNA--N 94
KL +I + I ++ + L PG + + GS+
Sbjct: 109 WCKLYEILHYFRWHEYINEAEYHSMHLCECPGGFISALNHYIHLNVINKRQRLGSSKLHW 168
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR------------------------Q 130
+ +++ +
Sbjct: 169 EWKANSLNPYFEGNNPNAILTDDIIYRDTYRAWNMGADDSGDITKVCNIDYIWQKTSKNT 228
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGT 188
DLV +D + + T S+ T AL +L G F++K F T
Sbjct: 229 KNCWLADLVTADGSLDIQYNPNEQEKLTSSIQYCETVCALGILRKHGSFIIKCFNILHHT 288
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
T I+ LL FQ V VKP+ S+ S E++++A F+
Sbjct: 289 TISIIALLCYCFQNVHIVKPIMSKGGSGEIYIVAMNFQ 326
>gi|260787461|ref|XP_002588771.1| hypothetical protein BRAFLDRAFT_125627 [Branchiostoma floridae]
gi|229273941|gb|EEN44782.1| hypothetical protein BRAFLDRAFT_125627 [Branchiostoma floridae]
Length = 805
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 134 GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTND 191
++V +D + + L AL++L GG +VK F ++
Sbjct: 406 HYCEVVTADGSIDCQKNPGEQESIVSQLHYCEVVSALQLLGEGGALVVKKFTMLEPSSAC 465
Query: 192 ILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ LL FQ+V KPV S++ + E++++ G+
Sbjct: 466 LMYLLNCAFQEVHVFKPVTSKSGNSEVYVVCVGY 499
>gi|71998392|ref|NP_497098.2| hypothetical protein Y53F4B.13 [Caenorhabditis elegans]
gi|75023773|sp|Q9NAA5|MTR1_CAEEL RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1
gi|34556112|emb|CAB70104.2| C. elegans protein Y53F4B.13, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 927
Score = 65.6 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
L+++D + G I + + L +L ++ GG+F K F + ++
Sbjct: 374 HLMMADGGFSVEGQENIQEILSKRLYLCQLLVSLCIVREGGNFFCKLFDIFTPFSVGLIY 433
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L++ +Q V KP SR + E ++ KG RK
Sbjct: 434 LMRVCYQSVSLHKPHTSRPANSERYITCKGLRK 466
>gi|299116333|emb|CBN76137.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 760
Score = 65.6 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTN 190
DLV++D + L A AL +L G F+ K F+ +T
Sbjct: 441 EKYLDLVVADGGFGAARDALQQERLLSPLVHAEALTALLLLREEGSFVCKLFECWTESTA 500
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+L LL + F+++ VKP+ASR S E +L+ GF
Sbjct: 501 ALLYLLHRKFRRIAIVKPIASRPASGERYLVCTGF 535
>gi|221123226|ref|XP_002155024.1| PREDICTED: similar to predicted protein, partial [Hydra
magnipapillata]
Length = 604
Score = 65.2 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 76/207 (36%), Gaps = 26/207 (12%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRI---VDLGSSPGSWSQVAARITGS------------ 91
+ ++ K I + N + V L +PG++ S
Sbjct: 207 FVTQAWAKFYTILGTFDLFSENLTVANSVHLCEAPGAFISSLNHYLQSKFYNIKFNWIGT 266
Query: 92 -------NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG--GNPDLVLSD 142
+ ++ D +E + F K ++ + I G+ D+V +D
Sbjct: 267 TLNPYYEGNIHGEMIVDDRFLIETLPNWNFGKDFSGNIMCASNMELLIKSVGSIDIVTAD 326
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKHF 200
+ + L T AL +L+I G+F++K F T +L L K F
Sbjct: 327 GSIDCSDDPAEQEIVVAPLLLWETVTALNILSIKGNFVLKIFTTFENFTICLLYFLCKCF 386
Query: 201 QKVIHVKPVASRAESVEMFLLAKGFRK 227
+ V KP S++ + E++++ K ++K
Sbjct: 387 ESVTLSKPGPSKSGNSEVYVVCKNYQK 413
>gi|316964771|gb|EFV49726.1| putative ribosomal RNA large subunit methyltransferase J
[Trichinella spiralis]
Length = 417
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/221 (19%), Positives = 76/221 (34%), Gaps = 41/221 (18%)
Query: 47 WRARSAYKLLQINE--KHQILQSNR-----------------RIVDLGSSPGSWSQVAAR 87
++ R+A KL ++ Q+ D+ S PG +++
Sbjct: 168 FQNRAAIKLANLDALVDFQLTDPKDADGNSIVPNVAEYPELFYFADVCSGPGGFTEYVLW 227
Query: 88 ITGSNANNTRVVAIDILDMEPIL-----GVKFFKFDFLDLDSWEFI-------------- 128
G NA+ + + D V F F D +
Sbjct: 228 KRGWNAHGFGMTLRNDCDFRLDKFTASSPVMFEAFYGEDGIDGDGDITKGSNLESFSNFV 287
Query: 129 -RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG- 186
+ L ++D + +G + + + + + L +L GG FL K F
Sbjct: 288 LKNTDQKGVHLFMADGGFSVVGEEILQEVLSKRIYLCQSLCGLLVLRKGGTFLCKFFDTF 347
Query: 187 -GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
T D++CLL F K+ KP +SR + E +++ GFR
Sbjct: 348 TPFTVDLICLLWHCFDKLTLHKPHSSRPGNSEKYVIGIGFR 388
>gi|170586496|ref|XP_001898015.1| FtsJ-like methyltransferase family protein [Brugia malayi]
gi|158594410|gb|EDP32994.1| FtsJ-like methyltransferase family protein [Brugia malayi]
Length = 532
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 68/207 (32%), Gaps = 23/207 (11%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
R ++ +H Y + ++ +K +I + L P S ++
Sbjct: 79 RSFIRKHAKSAYSTE-----YSTQAFFKFYEILVRFSHL----------CFPCSDAKHII 123
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG------GNPDLVL 140
+ N+ ++ + D ++ + I G L+
Sbjct: 124 SLNPHYEWNSPFDMFLDDELITSTSSNWLFGPDNSGDILKWTNEYINDIAKKVGKFSLIT 183
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKK 198
+D + + L + +L +L G F+VK + T +L L
Sbjct: 184 ADGSVYCQDNPAEQERIIFPLLQKEIDISLSLLQTNGTFIVKMYTAFLNDTVTLLNRLLM 243
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGF 225
F +V +KP S+ + E++LL +
Sbjct: 244 CFHEVHVIKPSCSKPGNSEVYLLCASY 270
>gi|330797403|ref|XP_003286750.1| hypothetical protein DICPUDRAFT_150730 [Dictyostelium purpureum]
gi|325083268|gb|EGC36725.1| hypothetical protein DICPUDRAFT_150730 [Dictyostelium purpureum]
Length = 737
Score = 65.2 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 10/177 (5%)
Query: 54 KLLQINEK--HQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILG 111
KLL+ + + +L+ + + G + ++ + + G
Sbjct: 263 KLLEQQDNSGNGVLELDDIVKGFGFTIRGKCDWNIERFSK-----QIPIHNFKKEYGLDG 317
Query: 112 VKFFKFDFLDLDSWEFIRQAIGGNP-DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
F + I + G L ++D T G + L
Sbjct: 318 TGNILFSANIKNFSNNIFEYTNGIGLHLFMADGGVSTEGKENQQEILLAQLILCQILTMF 377
Query: 171 EMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
E L GG F+ K F T ++ L+ +HF+ KP SR + E +++AK +
Sbjct: 378 ETLGKGGSFVCKIFDTYTPFTIGLIYLVYQHFETFSICKPYTSRPLNSERYIIAKNY 434
>gi|291510282|gb|ADE10097.1| NADB Rossmann [Tremella fuciformis]
Length = 96
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 177 GDFLVKTFQGGTTNDILC-LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G+ ++K F + L+ HF KV KP SR ES E + + G+R
Sbjct: 41 GNLVLKFFAHPDLDAFRRTQLEPHFHKVHVDKPKESRKESSEAYWVCLGYR 91
>gi|156394270|ref|XP_001636749.1| predicted protein [Nematostella vectensis]
gi|156223855|gb|EDO44686.1| predicted protein [Nematostella vectensis]
Length = 422
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 30/205 (14%)
Query: 51 SAYKLLQINEKHQIL------QSNRRIVDLGSSPGSW----SQVAARITGSNANNTRVVA 100
+ KL ++ + ++ V L +PG++ +
Sbjct: 119 AFAKLYEVLASYNVVPTEAVSSKKLYGVHLCEAPGAFVAATNHYLRNHHPDLEWVWLGAT 178
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIR------------------QAIGGNPDLVLSD 142
++ F+ + +A G LV +D
Sbjct: 179 LNPYYEGHSPKALLDDDRFIVETLQNWDFGADGTGDLMQLENLNHLAEACQGKVHLVTAD 238
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND--ILCLLKKHF 200
+ + L AL +L GG ++ K F + ++ L+ F
Sbjct: 239 GSIDCSDEPEEQENAVSQLIFCEAVTALTVLATGGCYVFKMFTTLEHHMVCLMYLMCCLF 298
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
++V +KP S+ + E+++ G+
Sbjct: 299 EEVHVIKPGTSKGGNSEVYITCCGY 323
>gi|323509295|dbj|BAJ77540.1| cgd7_2570 [Cryptosporidium parvum]
Length = 516
Score = 64.8 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 67/218 (30%), Gaps = 43/218 (19%)
Query: 52 AYKLLQINEKHQ----ILQSNRRIVDLGSSPGSWSQVA-----------ARITGSNA--N 94
KL +I + I ++ + L PG + + GS+
Sbjct: 109 WCKLYEILHYFRWHEYINEAEYHSMHLCECPGGFISALNHYIHLNVINKRQRLGSSKLHW 168
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR------------------------Q 130
+ +++ +
Sbjct: 169 EWKANSLNPYFEGNNPNAILTDDIIYRDTYRAWNMGADDSGDITKVCNIDYIWQKTSKNT 228
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGT 188
DLV +D + + T S+ T AL +L G F++K F T
Sbjct: 229 KNCWLADLVTADGSLDIQYNPNEQEKLTSSIQYCETVCALGILRKHGSFIIKCFNILHHT 288
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
T I+ LL FQ V VKP+ S+ S E++++A F+
Sbjct: 289 TISIIALLCYCFQNVHIVKPIMSKGGSGEIYIVAMNFQ 326
>gi|21740261|emb|CAD39141.1| hypothetical protein [Homo sapiens]
Length = 691
Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 182 KTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
K F+ +L + ++ F++V KP ASR ES E+F++ +GF
Sbjct: 1 KVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGF 44
>gi|115656140|ref|XP_001203540.1| PREDICTED: similar to CDNA sequence BC025546, partial
[Strongylocentrotus purpuratus]
gi|115681669|ref|XP_785039.2| PREDICTED: similar to CDNA sequence BC025546, partial
[Strongylocentrotus purpuratus]
Length = 906
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ- 185
I+Q + G LV +D + + R L + AL++L G FLVK F
Sbjct: 99 LIQQEMNGTVHLVTADGSVNCQDDPEHQEHRVFPLVFCQSLTALKLLAPEGAFLVKMFTM 158
Query: 186 -GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
T ++ LL F++V +KP S+A + E++++ K +
Sbjct: 159 YNANTACLMNLLNIAFKEVTVLKPACSKAGNSEVYVMCKSY 199
>gi|326490970|dbj|BAJ98120.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 85
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNT--------RV 98
+RARSAYKLLQI++ I Q +R+VDL +PGSWSQV + G R+
Sbjct: 2 YRARSAYKLLQIDDIFHIFQDVQRVVDLCGAPGSWSQVCRKKLGEKGLFASREEGQGERI 61
Query: 99 VAIDILDMEPILGVKFFKFDFLD 121
V++D+ + PI V D
Sbjct: 62 VSVDLQETAPIDNVHHIVGDITK 84
>gi|170068524|ref|XP_001868900.1| cell division protein ftsj [Culex quinquefasciatus]
gi|167864514|gb|EDS27897.1| cell division protein ftsj [Culex quinquefasciatus]
Length = 241
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
M + L+K + G + +++++Q+V +KP ASRA+S E F+LA+GF
Sbjct: 1 MSSPNASLLMKVWDNGEVPALEKNIQRYYQQVKRIKPRASRADSAENFVLARGF 54
>gi|189211395|ref|XP_001942028.1| cell division protein ftsj [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187978121|gb|EDU44747.1| cell division protein ftsj [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 79
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 36/69 (52%)
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
M LC AA FA + L GG F+ K ++G +K+ F KV KP +SRAES E
Sbjct: 1 MDLCMAAMTFAFDTLKTGGHFVCKYYKGSEEKAFETRMKRLFAKVHREKPDSSRAESKEA 60
Query: 219 FLLAKGFRK 227
+ + ++
Sbjct: 61 YFVGLRRKE 69
>gi|66815279|ref|XP_641656.1| D111/G-patch domain-containing protein [Dictyostelium discoideum
AX4]
gi|74856229|sp|Q54WR1|MTR1_DICDI RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1
gi|60469747|gb|EAL67735.1| D111/G-patch domain-containing protein [Dictyostelium discoideum
AX4]
Length = 757
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 72/240 (30%), Gaps = 52/240 (21%)
Query: 38 YVQRAQLEGWRA--------RSAYKLLQINEKHQILQSNRRIV----------DLGSSPG 79
YV R + + + R+A K+ I++ +L + D+ + PG
Sbjct: 198 YVARKKSNPYESIKGSIFINRAAVKMANIDKLADLLTPIIPVPGKPRDFIYFGDVCAGPG 257
Query: 80 SWSQVAARITGSNANN--------------------TRVVAIDILDMEPILGVKFFKFDF 119
+++ + + I F K
Sbjct: 258 GFTEYVYWKKTRGGKIKGEEGLDLDDVVKGFGFTIKGQCDWNVEKFSKQIPIHNFVKEYG 317
Query: 120 LDLDSWEFIRQAIGGNPDLVL------------SDMAYPTIGHRKIDHLRTMSLCEAATF 167
LD + I V +D T G + L L
Sbjct: 318 LDDTGNILKSENIRDFSSKVFYNTNGFGLQLFLADGGINTDGKESLQELMLQQLILCQIL 377
Query: 168 FALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
E + GG+F+ K F T +L L+ +HFQ VKP SR + E +++ K F
Sbjct: 378 TMFETIGRGGNFVCKIFDTFTPFTIGLLYLVYQHFQSFSIVKPFTSRPLNSERYIICKNF 437
>gi|219127821|ref|XP_002184126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404357|gb|EEC44304.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 466
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/229 (19%), Positives = 79/229 (34%), Gaps = 50/229 (21%)
Query: 47 WRARSAYKLLQINE--KHQILQSNRR----IVDLGSSPGSWSQVAARITGSNA------- 93
+ RSA KL I+ + + + + VDL ++PG +S+ + +NA
Sbjct: 138 FINRSAIKLANIDAVLRFDLSRPGKNGQFSFVDLCAAPGGFSEYLGKRCHANAVPECRGY 197
Query: 94 ----------------------------------NNTRVVAIDILDMEPILGVKFFKFDF 119
DIL E I + D
Sbjct: 198 GMSLLSTNEYGEATKWKMDDSTSTENGTYAQYRVCEGSDGTGDILKWENIEALHNMVRDD 257
Query: 120 LDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+ + G DLV++D + + L L +L GG
Sbjct: 258 ISAVARVESSVEW-GKVDLVVADGGFDAQRDSDHQEAISQKLVVCEIAAGLLLLKKGGKL 316
Query: 180 LVKTF--QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+VK F Q ++ L F+++I +KP++SR S E +++ +GF+
Sbjct: 317 MVKMFGFQTEIIRSVMEDLAFTFEEIIALKPISSRPASAERYVVFRGFK 365
>gi|157137547|ref|XP_001664002.1| hypothetical protein AaeL_AAEL013813 [Aedes aegypti]
gi|108869685|gb|EAT33910.1| conserved hypothetical protein [Aedes aegypti]
Length = 702
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 76/226 (33%), Gaps = 36/226 (15%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ--ILQSN-----RRIVDLGSSPGS 80
W R+ ++P+ +A + R+A K+ ++ + Q VD+ PG
Sbjct: 92 RW-ARNRSNPFDVKAGQ--FMTRAAVKIANVDAIFGWQLCQRGESDDLMYFVDVFGGPGG 148
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKF--------------------FKFDFL 120
S+ + ++ N + F F + +
Sbjct: 149 CSEYV--LWRNDGWNAKGFGFSTKGDYEFHPEMFRMGAPESFDPFYGANDEGNIFDPENV 206
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFL 180
Q L++ D + + + L A+ ++ GG+ +
Sbjct: 207 ASFVEYVKSQTDRLGAHLIMCDGGFFVKN--NCQEIISKQLYLCLVLLAVAVIRPGGNAI 264
Query: 181 VKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+K F + ++ +L K + KV VKP +SR + E +L+ +
Sbjct: 265 LKVFDLYTSFSVGLVYILTKSYGKVSIVKPASSRPANSERYLVCQN 310
>gi|323509753|dbj|BAJ77769.1| cgd7_2570 [Cryptosporidium parvum]
Length = 522
Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/218 (17%), Positives = 67/218 (30%), Gaps = 43/218 (19%)
Query: 52 AYKLLQINEKHQ----ILQSNRRIVDLGSSPGSWSQVA-----------ARITGSNA--N 94
KL +I + I ++ + L PG + + GS+
Sbjct: 109 WCKLYEILHYFRWHEYINEAEYHSMHLCECPGGFISALNHYIHLNVINKRQRLGSSKLHW 168
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIR------------------------Q 130
+ +++ +
Sbjct: 169 EWKANSLNPYFEGNNPNAILTDDIIYRDTYRAWNMGADDSGDITKVCNIDYIWQKTSKNT 228
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGT 188
DLV +D + + T S+ T AL +L G F++K F T
Sbjct: 229 KNCWLADLVTADGSLDIQYNPNEQEKLTSSIQYCETVCALGILRKHGSFIIKCFNILHHT 288
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
T I+ LL FQ V VKP+ S+ S E++++A F+
Sbjct: 289 TISIIALLCYCFQNVHIVKPIMSKGGSGEIYIVAMNFQ 326
>gi|156082982|ref|XP_001608975.1| ribosomal RNA large subunit methyltransferase J domain containing
protein [Babesia bovis T2Bo]
gi|154796225|gb|EDO05407.1| ribosomal RNA large subunit methyltransferase J domain containing
protein [Babesia bovis]
Length = 1005
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/220 (14%), Positives = 67/220 (30%), Gaps = 45/220 (20%)
Query: 51 SAYKLLQINEKHQILQ----------SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
+ KL +I E +++++ L PG + + +
Sbjct: 131 AWVKLYEILEFYKVVETLIPRLAEDGGTINSFHLSECPGGFIAALNHAIKQRNSTANLSW 190
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNP------------------------ 136
G + D+ + + + G+
Sbjct: 191 QATSLNPYHEGNSHMECLAEDILYRDTVTNWLTGSDESGNINKTANIEYIWDRVSRASKF 250
Query: 137 ---------DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGG 187
D+V +D ++ T L + AL ++ +G F++K F
Sbjct: 251 NKGRAPVLVDIVTADGSFCCQADPNNQETLTAPLKLSEVVCALGLMRVGAIFILKMFTLF 310
Query: 188 TTNDI--LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ + +LK F+ V KP S++ E++++ GF
Sbjct: 311 EESSLSIFTILKMCFKTVEVYKPHLSKSNGSEVYVVCIGF 350
>gi|302498226|ref|XP_003011111.1| hypothetical protein ARB_02633 [Arthroderma benhamiae CBS 112371]
gi|291174659|gb|EFE30471.1| hypothetical protein ARB_02633 [Arthroderma benhamiae CBS 112371]
Length = 253
Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 28/128 (21%)
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTM-------SLCEAATFFALEMLNIGGDF 179
A G+ D++LSDM T G + DHL +M LC AA FA +L GG F
Sbjct: 110 LPMIAKVGSVDVILSDMLMNTSGTKSRDHLGSMVCVELPEELCNAALDFASNVLKEGGHF 169
Query: 180 LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRA---------------------ESVEM 218
+ K +QG D LK+ F +V KP +SR+ ES E
Sbjct: 170 VCKYYQGPGEKDFENELKRLFHRVYREKPESSRSVSLLYQLVFLYLPGLANEYAQESKEA 229
Query: 219 FLLAKGFR 226
+ + R
Sbjct: 230 YFIGIRRR 237
>gi|308197135|sp|A8XYX2|MTR1A_CAEBR RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1A; AltName:
Full=Cap1 2'O-ribose methyltransferase 1A; Short=MTr1A
gi|309356152|emb|CAP37839.2| hypothetical protein CBG_20906 [Caenorhabditis briggsae AF16]
Length = 874
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
L+++D + G I + + L +L ++ GG+F K F + ++
Sbjct: 349 HLMMADGGFSVEGQENIQEILSKRLYLCQLLVSLCIVREGGNFFCKLFDIFTPFSVGLIY 408
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L++ + + KP SR + E ++ KG RK
Sbjct: 409 LMRVCYDSISLHKPHTSRPANSERYITCKGLRK 441
>gi|71666780|ref|XP_820346.1| methyltransferase [Trypanosoma cruzi strain CL Brener]
gi|122045901|sp|Q4E123|MTR1_TRYCR RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1
gi|70885686|gb|EAN98495.1| methyltransferase, putative [Trypanosoma cruzi]
Length = 362
Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 27/204 (13%)
Query: 49 ARSAYKLLQINEKHQIL----------QSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
R+ +KL ++ E + + D+ PG++SQ ++ R
Sbjct: 90 NRAGHKLREVMEATGVWEHLQRETSGQKGAVVFADVCGGPGAFSQALFEMSRQYKLRMRG 149
Query: 99 VAIDILDMEPIL--------------GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMA 144
+ + ++ + G+ F + + I LV++D
Sbjct: 150 FGMTLRNVRGLDWYSSLPLGKFLPTYGIDGTGDIFNLANIEALLSLTIRERLKLVVADGG 209
Query: 145 YPT-IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQ 201
+ + + AL++L GG F++K F + +L L +
Sbjct: 210 FNVPFNIANYQETLSGRILFGQWLAALKLLRPGGCFILKLFDTFSPLSRALLYLSTYLYD 269
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
+V VKP SR + E +L+ GF
Sbjct: 270 RVHVVKPRHSRVVNSERYLVCLGF 293
>gi|320170922|gb|EFW47821.1| FtsJ methyltransferase domain-containing protein 2 [Capsaspora
owczarzaki ATCC 30864]
Length = 840
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 51/179 (28%), Gaps = 26/179 (14%)
Query: 71 IVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
D+ + PG +S+ +V + + F +
Sbjct: 357 ACDICAGPGGFSEYM---LWRRPQLCKVFGFTLRGDQDFTPHLFHPECIQADFHACYGAD 413
Query: 131 AIGGN---------------------PDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
G + D + G L
Sbjct: 414 KTGNMLSSDNIRHFAQTVRDGSNGVGAHFCIGDGGFGVGGDENFQEEHLKQLLLCQFLTG 473
Query: 170 LEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L +L GG F+ K F + ++ ++ + F++ +KP SR + E +++ + F+
Sbjct: 474 LVVLGPGGTFICKVFDLFTPFSAGLVYIMSRLFRRTCLIKPFTSRPANSERYIVCEDFQ 532
>gi|268533156|ref|XP_002631706.1| Hypothetical protein CBG20906 [Caenorhabditis briggsae]
Length = 842
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
L+++D + G I + + L +L ++ GG+F K F + ++
Sbjct: 349 HLMMADGGFSVEGQENIQEILSKRLYLCQLLVSLCIVREGGNFFCKLFDIFTPFSVGLIY 408
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L++ + + KP SR + E ++ KG RK
Sbjct: 409 LMRVCYDSISLHKPHTSRPANSERYITCKGLRK 441
>gi|328715384|ref|XP_003245616.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
isoform 1 [Acyrthosiphon pisum]
gi|328715386|ref|XP_003245617.1| PREDICTED: ftsJ methyltransferase domain-containing protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 704
Score = 62.9 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 10/156 (6%)
Query: 81 WSQVAARITGSNANNTRVVAIDILDMEPILGVKF-------FKFDFLDLDSWEFIRQAIG 133
W + + + +V D L + + +F + + +
Sbjct: 156 WLAMTLNPYHESNGHPDIVTDDRLMLHTLPNWEFGPDYTGDIFQPGYAEHLYRTVVERFS 215
Query: 134 GNPDL-VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
G V +D + L + T AL +L G ++K F N I
Sbjct: 216 GKGAWLVTADGSIDCSDDPGEQETVVSRLHDHETMVALSVLRDNGSLVLKAFTMFECNSI 275
Query: 193 --LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ LL F+ V+ KP S+ + E++++ KG+R
Sbjct: 276 CRMFLLCCLFRSVVLKKPATSKPGNSEVYVVCKGYR 311
>gi|159487565|ref|XP_001701793.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281012|gb|EDP06768.1| predicted protein [Chlamydomonas reinhardtii]
Length = 300
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI--LCLL 196
V +D A T L SL AL ML GG + K F + L L+
Sbjct: 189 VTADGAIDTSMVPAAQELVNASLHFTEIVAALGMLAPGGALVWKGFTLFEHTSLCTLHLV 248
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ V KP S+ + E++++ +GFR
Sbjct: 249 GCLFESVSVCKPCTSKPCNSEVYVVGRGFR 278
>gi|308503120|ref|XP_003113744.1| hypothetical protein CRE_26334 [Caenorhabditis remanei]
gi|308263703|gb|EFP07656.1| hypothetical protein CRE_26334 [Caenorhabditis remanei]
Length = 917
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
L+++D + G I + + L +L ++ GG+F K F + ++
Sbjct: 368 HLMMADGGFSVEGQENIQEILSKRLYLCQLLVSLCIVREGGNFFCKLFDIFTPFSIGLIY 427
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
L++ + + KP SR + E ++ KG R+
Sbjct: 428 LMRVCYDSISLHKPHTSRPANSERYITCKGLRR 460
>gi|256070532|ref|XP_002571596.1| hypothetical protein [Schistosoma mansoni]
gi|238656741|emb|CAZ27826.1| expressed protein [Schistosoma mansoni]
Length = 858
Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTNDILC 194
++++D + + + + L AL L GG FL K F T DI+
Sbjct: 508 HILMADGGFDVSSQYNLQEVMSKQLYLCQCLCALINLRPGGHFLTKLFDTFTEFTIDIIY 567
Query: 195 LLKKHFQKVIHVKPVASRAESVEMF 219
++ F+++ +KPV SR + E F
Sbjct: 568 IMGYLFEEIYIIKPVTSRPANSERF 592
>gi|322493833|emb|CBZ29122.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 335
Score = 62.1 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 64/171 (37%), Gaps = 4/171 (2%)
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVA--ARITGSNANNTRVVAIDILDMEPILGVKFF 115
I + +IL++ + + L +P + + T +V D + +
Sbjct: 82 ILQHQRILRTVQSALSLMRAPPTSPPRVLSSAHTAPQTRCVDMVLHDGVSVVKGQRAFSV 141
Query: 116 KFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI 175
+ + + + ++SD+ + HR + +S +A + +L
Sbjct: 142 TYAQNQMALSSLLLGSKLFQRHGLISDLPTDAVPHRSSNPEGLISRSTSAPRSSSAVL-- 199
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K Q +L + F V KP ASR ES+E +++A F+
Sbjct: 200 PVCFVSKVLQSDHFAQVLAATQALFCHVQAFKPAASRPESLERYVVATHFQ 250
Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 47 WRARSAYKLLQINEKHQILQSNR--RIVDLGSSPGSWSQVAARIT------GSNANNTRV 98
+R +SA KL++IN++++I R +VDL ++PG ++QVA + +A + V
Sbjct: 2 YRCQSALKLVEINDRYRIFHRFRPSTVVDLAAAPGGFAQVALELMHLPENAPKSALSPMV 61
Query: 99 VAIDILDMEPILGVKFFKFDFLDLD 123
VA+D ++P+ G+ + + L
Sbjct: 62 VAVDQRPIDPMPGLVVVRGNILQHQ 86
>gi|268575880|ref|XP_002642920.1| Hypothetical protein CBG15196 [Caenorhabditis briggsae]
Length = 494
Score = 62.1 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 70/203 (34%), Gaps = 28/203 (13%)
Query: 51 SAYKLLQINEK---HQILQSNRRIVDLGSSPGSWSQ--VAARITGSNANNTRVVAIDILD 105
+ K+L+I E + + N L PG + R+ ++ ++ + L+
Sbjct: 96 AFLKMLEILESGFLNHLPWDNLNSFHLCEGPGYFLDAIYVHRLRTTSQHSEWHWGANTLN 155
Query: 106 MEPILGVKFFKFDFLDLDSWEFIRQAI---------------------GGNPDLVLSDMA 144
F K G DLV +D +
Sbjct: 156 PYFENRSCFEKLIDDSHIRGHERNWYFGPSDDGDVAKLTEDYLIEKGLKGTFDLVTADGS 215
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT--FQGGTTNDILCLLKKHFQK 202
T G L A AL +L GG ++KT F D++ LL +F +
Sbjct: 216 TNTQGKEGQIEEIVGPLIRAEVNAALLLLKPGGSLILKTYRFCEKQIQDVMFLLADNFSE 275
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
+ VKP+ASR S E +L+ GF
Sbjct: 276 IRVVKPMASRPGSSERYLICNGF 298
>gi|309358872|emb|CAP33554.2| hypothetical protein CBG_15196 [Caenorhabditis briggsae AF16]
Length = 555
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/203 (21%), Positives = 70/203 (34%), Gaps = 28/203 (13%)
Query: 51 SAYKLLQINEK---HQILQSNRRIVDLGSSPGSWSQ--VAARITGSNANNTRVVAIDILD 105
+ K+L+I E + + N L PG + R+ ++ ++ + L+
Sbjct: 96 AFLKMLEILESGFLNHLPWDNLNSFHLCEGPGYFLDAIYVHRLRTTSQHSEWHWGANTLN 155
Query: 106 MEPILGVKFFKFDFLDLDSWEFIRQAI---------------------GGNPDLVLSDMA 144
F K G DLV +D +
Sbjct: 156 PYFENRSCFEKLIDDSHIRGHERNWYFGPSDDGDVAKLTEDYLIEKGLKGTFDLVTADGS 215
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT--FQGGTTNDILCLLKKHFQK 202
T G L A AL +L GG ++KT F D++ LL +F +
Sbjct: 216 TNTQGKEGQIEEIVGPLIRAEVNAALLLLKPGGSLILKTYRFCEKQIQDVMFLLADNFSE 275
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
+ VKP+ASR S E +L+ GF
Sbjct: 276 IRVVKPMASRPGSSERYLICNGF 298
>gi|224003169|ref|XP_002291256.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973032|gb|EED91363.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 599
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF-- 184
+ +LV++D + + + T AL +L GG F++K F
Sbjct: 390 KSNNSSSSRVNLVVADGGFDAQRDSNDQESIAHCIIVSQTAAALSLLRPGGSFVLKMFGF 449
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ T +L L F+K+ VKP SR S E +L+ G+
Sbjct: 450 RENGTRRLLRHLYGCFEKMTFVKPTLSRPASAERYLVCWGY 490
>gi|313229008|emb|CBY18160.1| unnamed protein product [Oikopleura dioica]
Length = 351
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/205 (18%), Positives = 70/205 (34%), Gaps = 30/205 (14%)
Query: 51 SAYKLLQINEKH-------QILQSNRRIVDLGSSPGSWS-------------------QV 84
+ K +I + + L +PG++
Sbjct: 104 AWLKFYEILSNIPELILSVDLTADRFTTLHLCEAPGAFISALMSYWANEHSERTDFPDWY 163
Query: 85 AARITG--SNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSD 142
AA + ++ V+ +D L +E F + ++ ++ + G LV +D
Sbjct: 164 AATLNPHHEESDPGAVIRVDTLILEFPDRWVFGTDNTGNIFNFGSLASLKGKQFHLVTAD 223
Query: 143 MAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHF 200
+ + L A L G+ L+K F +T IL F
Sbjct: 224 GGVDCSADPEFQEQNSADLKAAEYKGICYKLKPKGNALLKLFCCCHESTLKILESAASSF 283
Query: 201 QKVIHVKPVASRAESVEMFLLAKGF 225
+KV VKP +S+A + E++L+ G+
Sbjct: 284 RKVELVKPASSKAGNSELYLVMMGY 308
>gi|322820997|gb|EFZ27452.1| methyltransferase, putative [Trypanosoma cruzi]
Length = 362
Score = 61.7 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 27/204 (13%)
Query: 49 ARSAYKLLQINEKHQIL----------QSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
R+ +KL ++ E + + D+ PG++SQ ++ R
Sbjct: 90 NRAGHKLREVMEAAGVWEHLQRETRGQKGAVVFADVCGGPGAFSQALFEMSRQYKLRMRG 149
Query: 99 VAIDILDMEPIL--------------GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMA 144
+ + ++ + G+ F + + I LV++D
Sbjct: 150 FGMTLRNVMGLDWYSSLPLGKFLPTYGIDGTGDIFNLANIEALLSLTIRERLKLVVADGG 209
Query: 145 YPT-IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQ 201
+ + + AL++L GG F++K F + +L L +
Sbjct: 210 FNVPFNIANYQETLSGRILFGQWLAALKLLRPGGCFILKLFDTFSPLSRVLLYLSTYLYD 269
Query: 202 KVIHVKPVASRAESVEMFLLAKGF 225
+V VKP SR + E +L+ GF
Sbjct: 270 RVHVVKPRHSRVVNSERYLVCLGF 293
>gi|25144487|ref|NP_498461.2| hypothetical protein Y40D12A.1 [Caenorhabditis elegans]
gi|20198897|gb|AAC26945.2| Hypothetical protein Y40D12A.1a [Caenorhabditis elegans]
Length = 635
Score = 61.7 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 74/206 (35%), Gaps = 31/206 (15%)
Query: 51 SAYKLLQINEKHQI---LQSNRRIVDLGSSPGSWSQ-----VAARITGSNANNTRVVAID 102
+ KL +I E + S+ L PG + + + + + +
Sbjct: 101 AFLKLCEIFEVFKFDIFEGSSISSFHLCEGPGYFIEAVHVALMRSRGKNEEMSYWKWGAN 160
Query: 103 ILDMEPILGVKF--FKFDFLDLDSWEFI-------------------RQAIGGNPDLVLS 141
L+ F D + + +Q + G DLV +
Sbjct: 161 TLNPYFENRSCFDKLIDDSHIRPTMDQWYFGPSDDGDIEKFTEEYLIKQKLAGTFDLVTA 220
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT--FQGGTTNDILCLLKKH 199
D + T G SL A AL++L G ++KT F +T D++ LL +
Sbjct: 221 DGSTNTQGKEGEIESIVSSLISAEVEVALKLLRRNGRLILKTYRFCAKSTRDVMNLLADN 280
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
F + +KP+ASR S E +++ GF
Sbjct: 281 FSSIKAIKPMASRPGSSERYIVCDGF 306
>gi|37183431|gb|AAQ89602.1| FtsJ [Histophilus somni]
gi|40804992|gb|AAR91753.1| FtsJ [Histophilus somni]
Length = 50
Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + ++ +
Sbjct: 1 MGKKKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQSDRLFK 50
>gi|322501390|emb|CBZ36469.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 335
Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K Q + +L + F+ V KPVASR ES+E +++A F+
Sbjct: 200 PVCFVSKVLQCDHSAQVLEATQALFRYVRIFKPVASRPESLERYVVATDFQ 250
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 47 WRARSAYKLLQINEKHQILQSNR--RIVDLGSSPGSWSQVAARIT 89
+R +SA KLL+IN++++I R +VDL ++PG ++QVA +
Sbjct: 2 YRCQSALKLLEINDRYRIFHRLRPSTVVDLAAAPGGFAQVALELM 46
>gi|146094605|ref|XP_001467328.1| hypothetical protein [Leishmania infantum JPCM5]
gi|134071693|emb|CAM70384.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 335
Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K Q + +L + F+ V KPVASR ES+E +++A F+
Sbjct: 200 PVCFVSKVLQCDHSAQVLEATQALFRYVRIFKPVASRPESLERYVVATDFQ 250
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 47 WRARSAYKLLQINEKHQILQSNR--RIVDLGSSPGSWSQVAARIT 89
+R +SA KLL+IN++++I R +VDL ++PG ++QVA +
Sbjct: 2 YRCQSALKLLEINDRYRIFHRLRPSTVVDLAAAPGGFAQVALELM 46
>gi|86371384|gb|ABC94784.1| non-structural polyprotein [Salmon pancreas disease virus]
Length = 2569
Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 69/181 (38%), Gaps = 21/181 (11%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q+ ++ R+A K ++ ++ S ++DLG++PG + + + V +
Sbjct: 1185 QVHSFKTRAAVKFAELTKR----VSYNSVLDLGAAPGGVTDYCVKKGKT------VTCVS 1234
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
G D + G DLV D A P H L
Sbjct: 1235 EQWDSKPRGAVVVTADINGPLN-------NLGIFDLVFCDAAGPRRYHHYAQCEDHAVLF 1287
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK---KHFQKVIHVKPVASRAESVEMF 219
+A +E GG F+VK + G ++ ++F+ V KPV+SR +VE+F
Sbjct: 1288 TSACKHGVERTAKGGVFIVKAY-GMADRRTERAVECTARYFKSVSVEKPVSSRITNVEVF 1346
Query: 220 L 220
Sbjct: 1347 F 1347
>gi|51342569|gb|AAU01399.1| non-structural polyprotein [Norwegian salmonid alphavirus]
Length = 2584
Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 69/181 (38%), Gaps = 21/181 (11%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q+ ++ R+A K ++ ++ S ++DLG++PG + + + V +
Sbjct: 1200 QVHSFKTRAAVKFAELTKR----VSYNSVLDLGAAPGGVTDYCVKKGKT------VTCVS 1249
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
G D + G DLV D A P H L
Sbjct: 1250 EQWDSKPRGAVVVTADINGPLN-------NLGIFDLVFCDAAGPRRYHHYAQCEDHAVLF 1302
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK---KHFQKVIHVKPVASRAESVEMF 219
+A +E GG F+VK + G ++ ++F+ V KPV+SR +VE+F
Sbjct: 1303 TSACKHGVERTAKGGVFIVKAY-GMADRRTERAVECTARYFKSVSVEKPVSSRITNVEVF 1361
Query: 220 L 220
Sbjct: 1362 F 1362
>gi|51342540|gb|AAU01395.1| non-structural polyprotein [Norwegian salmonid alphavirus]
Length = 2583
Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 69/181 (38%), Gaps = 21/181 (11%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q+ ++ R+A K ++ ++ S ++DLG++PG + + + V +
Sbjct: 1199 QVHSFKTRAAVKFAELTKR----VSYNSVLDLGAAPGGVTDYCVKKGKT------VTCVS 1248
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
G D + G DLV D A P H L
Sbjct: 1249 EQWDSKPRGAVVVTADINGPLN-------NLGIFDLVFCDAAGPRRYHHYAQCEDHAVLF 1301
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK---KHFQKVIHVKPVASRAESVEMF 219
+A +E GG F+VK + G ++ ++F+ V KPV+SR +VE+F
Sbjct: 1302 TSACKHGVERTAKGGVFIVKAY-GMADRRTERAVECTARYFKSVSVEKPVSSRITNVEVF 1360
Query: 220 L 220
Sbjct: 1361 F 1361
>gi|51342581|gb|AAU01401.1| non-structural polyprotein [Norwegian salmonid alphavirus]
Length = 2581
Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 69/181 (38%), Gaps = 21/181 (11%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q+ ++ R+A K ++ ++ S ++DLG++PG + + + V +
Sbjct: 1197 QVHSFKTRAAVKFAELTKR----VSYNSVLDLGAAPGGVTDYCVKKGKT------VTCVS 1246
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
G D + G DLV D A P H L
Sbjct: 1247 EQWDSKPRGAVVVTADINGPLN-------NLGIFDLVFCDAAGPRRYHHYAQCEDHAVLF 1299
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK---KHFQKVIHVKPVASRAESVEMF 219
+A +E GG F+VK + G ++ ++F+ V KPV+SR +VE+F
Sbjct: 1300 TSACKHGVERTAKGGVFIVKAY-GMADRRTERAVECTARYFKSVSVEKPVSSRITNVEVF 1358
Query: 220 L 220
Sbjct: 1359 F 1359
>gi|51342553|gb|AAU01397.1| non-structural polyprotein [Norwegian salmonid alphavirus]
Length = 2569
Score = 60.9 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 69/181 (38%), Gaps = 21/181 (11%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q+ ++ R+A K ++ ++ S ++DLG++PG + + + V +
Sbjct: 1185 QVHSFKTRAAVKFAELTKR----VSYNSVLDLGAAPGGVTDYCVKKGKT------VTCVS 1234
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
G D + G DLV D A P H L
Sbjct: 1235 EQWDSKPRGAVVVTADINGPLN-------NLGIFDLVFCDAAGPRRYHHYAQCEDHAVLF 1287
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK---KHFQKVIHVKPVASRAESVEMF 219
+A +E GG F+VK + G ++ ++F+ V KPV+SR +VE+F
Sbjct: 1288 TSACKHGVERTAKGGVFIVKAY-GMADRRTERAVECTARYFKSVSVEKPVSSRITNVEVF 1346
Query: 220 L 220
Sbjct: 1347 F 1347
>gi|294915723|ref|XP_002778337.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239886610|gb|EER10132.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 520
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 8/106 (7%)
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRK------IDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
+ G LV+ D + + + + + + + GG + K
Sbjct: 324 MKMDGRGAHLVMGDGGFEVSTDKDGNHLENYQEVYSARIILSEVLTMVRSCCKGGFLVCK 383
Query: 183 TFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F T I+ + + F+K VKP SR + E +L+ GF+
Sbjct: 384 LFDTFSTITASIIYVTTRLFEKCYIVKPQRSRVVNSERYLVGVGFK 429
>gi|328874897|gb|EGG23262.1| D111/G-patch domain-containing protein [Dictyostelium fasciculatum]
Length = 776
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/230 (14%), Positives = 67/230 (29%), Gaps = 51/230 (22%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRI--VDLGSSPGSWSQVAA-RITGSNANNTRVVAIDI 103
++ R+A K+ +++ Q+ ++I D+ + PG +++ R ++
Sbjct: 306 FQNRAALKMANLDQLAQVSMPGKKIYFADVCAGPGGFTEYLLYRKVKEGGARGFGFTLEG 365
Query: 104 LDMEPILG------VKFFKFDFLDLDSWEFIRQAIGGNPDL------------------- 138
+ +KF + + D
Sbjct: 366 DCDWKLDNFTDDSHIKFTANPASPGRVFREHSRNYVNPADTNWNFMIDYGADNDGDVLKS 425
Query: 139 ---------------------VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
++D T G+ L E L GG
Sbjct: 426 KNIKHFSNLVLKRTDGKRLDLFMADGGVSTDGNENNQEFLLQHLILCQFLMMFETLGEGG 485
Query: 178 DFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+F+ K F T ++ L+ F +KP SR + E +++AK
Sbjct: 486 NFVCKIFDTFNPFTIGLMYLVYLQFDSFSIIKPYTSRPLNSERYVVAKKK 535
>gi|294878282|ref|XP_002768337.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239870608|gb|EER01055.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 836
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ- 185
Q D+V +D + + T L + AL +L GG ++K F
Sbjct: 379 ERAQRKQQVCDIVTADGSVDSQFDANNQERITTRLHFSELVAALGLLRTGGSLVLKMFTL 438
Query: 186 -GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ I+ L++ F + I KP S+ + E++++ GF
Sbjct: 439 FEPSSKAIIWLVRAMFDRCIVCKPEMSKPGNSEVYVVGLGF 479
>gi|255639342|gb|ACU19968.1| unknown [Glycine max]
Length = 177
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 153 IDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASR 212
+D L +L GG + F+G T+ + C LK F V KP +SR
Sbjct: 1 MDEFVQSQLILPGLTIVTHVLKEGGKLI---FRGKDTSLLYCQLKLFFPVVTFAKPKSSR 57
Query: 213 AESVEMFLLAKGF 225
S+E F + + +
Sbjct: 58 NSSIEAFAVCENY 70
>gi|268533158|ref|XP_002631707.1| Hypothetical protein CBG20907 [Caenorhabditis briggsae]
Length = 816
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
L+++D A+ G I + + L +L ++ GG+FL F + ++
Sbjct: 311 HLMMADGAFSVQGQENIQEILSKRLYLCQLLVSLCIVREGGNFLCNLFDIFTPFSVGLIY 370
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L++ + + KP SR + E F++ KG R
Sbjct: 371 LMRVCYDSISLHKPHTSRPANSERFVVCKGLR 402
>gi|331232420|ref|XP_003328872.1| cell division protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309307862|gb|EFP84453.1| cell division protein [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 332
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIG-------G 177
E ++LSDM + G D ++ L A +++
Sbjct: 218 QEKETNDRRRTTTIILSDMLHSMTGIPTRDSQNSLDLSVTVADLARDLIPPNPGGSRASD 277
Query: 178 DFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++K Q T+ L + V VKP+ASR+ES E + + +G RK
Sbjct: 278 TLILKHLQSEFTHQFRDRLLAEWSLVKWVKPLASRSESREGYFVTRGRRK 327
Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 12/76 (15%)
Query: 26 SRDWLNRHINDPYVQ-RAQLEG---WRARSAYKLLQINEKHQIL--------QSNRRIVD 73
S+ +L R DPY + +++ G + ARSA+KL+Q++++ +I ++ R++D
Sbjct: 39 SKQFLRRAETDPYGKTKSRARGEPTYVARSAHKLIQLDQQFRIFPTPARSSPRTGFRVLD 98
Query: 74 LGSSPGSWSQVAARIT 89
LG++PG WS+V
Sbjct: 99 LGAAPGGWSEVVLERL 114
>gi|157877934|ref|XP_001687259.1| ensangp00000010174-like protein; methyltransferase [Leishmania
major strain Friedlin]
gi|75030406|sp|Q4Q089|MTR1_LEIMA RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1
gi|68130334|emb|CAJ09646.1| putative methyltransferase [Leishmania major strain Friedlin]
Length = 400
Score = 60.2 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 69/215 (32%), Gaps = 33/215 (15%)
Query: 44 LEGWRARSAYKLLQINEKH-------QILQSNRR-------IVDLGSSPGSWSQVAAR-- 87
+ R+ +KLL+ E ++L+ D+ PG++SQ +
Sbjct: 84 QRNFSNRAGHKLLESMESTGVWMELSKLLRGKSTKRPRDFAFADVCGGPGAFSQALFQAG 143
Query: 88 --------------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
+ G + + + G+ F +
Sbjct: 144 RKRGWRHLHGYGMTLAGVSGLDWYAHLLKSPQFTCTYGLDGTGDIFKLSNIDCLASITKA 203
Query: 134 GNPDLVLSDMAYPT-IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTN 190
LV++D + + + AL++L GG F++K F +
Sbjct: 204 APMFLVVADGGFNVDFSVTNYQETISSRIMYGQWLAALKLLRKGGCFVLKLFDTFSPLSR 263
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+L L +++V KP SR + E +L+ F
Sbjct: 264 AVLYLSCCMYRRVHVAKPRHSRVVNSERYLVCVDF 298
>gi|308197136|sp|A8XYX3|MTR1B_CAEBR RecName: Full=Inactive cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1B; AltName:
Full=Inactive cap1 2'O-ribose methyltransferase 1B;
Short=MTr1B
gi|309356153|emb|CAP37840.2| hypothetical protein CBG_20907 [Caenorhabditis briggsae AF16]
Length = 846
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
L+++D A+ G I + + L +L ++ GG+FL F + ++
Sbjct: 322 HLMMADGAFSVQGQENIQEILSKRLYLCQLLVSLCIVREGGNFLCNLFDIFTPFSVGLIY 381
Query: 195 LLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
L++ + + KP SR + E F++ KG R
Sbjct: 382 LMRVCYDSISLHKPHTSRPANSERFVVCKGLR 413
>gi|70952953|ref|XP_745609.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56525987|emb|CAH74337.1| hypothetical protein PC000044.00.0 [Plasmodium chabaudi chabaudi]
Length = 165
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
L++ D Y ++A+ G+RARS+YKL+QIN+K +I +
Sbjct: 4 LSKDRRDIYYRKAKENGYRARSSYKLIQINDKFEIFK 40
>gi|189014944|gb|ACD69681.1| methyl transferase [Mangifera indica]
Length = 115
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 174 NIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
GG ++K + + + K F+K ++P A+R+ S E++L+ +
Sbjct: 65 KPGGHLVIKLLESEDVKEFSQICKPLFRKASWLRPKATRSSSREIYLICQD 115
>gi|195999168|ref|XP_002109452.1| hypothetical protein TRIADDRAFT_53500 [Trichoplax adhaerens]
gi|190587576|gb|EDV27618.1| hypothetical protein TRIADDRAFT_53500 [Trichoplax adhaerens]
Length = 794
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 49/146 (33%), Gaps = 3/146 (2%)
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
GS + R+++ + ++ LV +
Sbjct: 169 PYYEGNKDGSTITDNRLISKTLSHWNFGRDNSGNILHRHNMTFLVESLSQWPS-IRLVTA 227
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTND--ILCLLKKH 199
D + + T AL +L G +++K F ++ LL
Sbjct: 228 DGSIDCSDRPGQQEAIVSPILYCETLTALRILTKDGVYVLKMFTSFQHRSICLIYLLLNV 287
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGF 225
FQ+V +KP S++ + E++++ G+
Sbjct: 288 FQEVKAIKPSCSKSGNSEVYIICIGY 313
>gi|19352424|ref|NP_598184.1| Nonstructural polyprotein [Sleeping disease virus]
gi|81995495|sp|Q8QL53|POLN_SLDV RecName: Full=Non-structural polyprotein; AltName: Full=Polyprotein
nsP1234; Short=P1234; Contains: RecName: Full=P123;
Contains: RecName: Full=mRNA-capping enzyme nsP1;
AltName: Full=Non-structural protein 1; Contains:
RecName: Full=Protease nsP2; AltName: Full=Non-structural
protein 2; Short=nsP2; Contains: RecName:
Full=Non-structural protein 3; Short=nsP3; Contains:
RecName: Full=RNA-directed RNA polymerase nsP4; AltName:
Full=Non-structural protein 4; Short=nsP4
gi|19171521|emb|CAC87660.1| non-structural polyprotein [Sleeping disease virus]
Length = 2593
Score = 59.8 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q+ ++ R+A K ++ ++ S ++DLG++ G + + + V +
Sbjct: 1203 QVHSFKTRAAVKFAELTKR----VSYNSVLDLGAARGGVTDYCVKKGKT------VTCVS 1252
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
G D + G DLV D A P H
Sbjct: 1253 EQWDSKPRGAVVITADINGPLN-------NLGIFDLVFCDAAGPRRYHHYAQCEDHARRS 1305
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK---KHFQKVIHVKPVASRAESVEMF 219
+A +E GG F+VK + G ++ ++F+ V KPV+SR +VE+F
Sbjct: 1306 TSACKHGVERTAKGGVFIVKAY-GMADRRTERAVECTARYFKSVSVEKPVSSRITNVEVF 1364
Query: 220 L 220
Sbjct: 1365 F 1365
>gi|294876050|ref|XP_002767527.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869187|gb|EER00245.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 380
Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ- 185
Q D+V +D + + T L + AL +L GG ++K F
Sbjct: 236 ERAQRKQQVCDIVTADGSVDSQFDANNQERITTRLHFSELVAALGLLRTGGSLVLKMFTL 295
Query: 186 -GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
++ I+ L++ F + I KP S+ + E++++ GF
Sbjct: 296 FEPSSKAIIWLVRAMFDRCIVCKPEMSKPGNSEVYVVGLGF 336
>gi|157873068|ref|XP_001685050.1| hypothetical protein [Leishmania major strain Friedlin]
gi|13751837|emb|CAC37239.1| FtsJ-like methyltransferase [Leishmania major]
gi|68128121|emb|CAJ08252.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 335
Score = 59.0 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K Q +L + F V KPVASR ES+E +++A F+
Sbjct: 200 PVCFVSKVLQCDHFAQVLAATQALFCHVRPFKPVASRPESLERYVVATDFQ 250
Score = 44.0 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 47 WRARSAYKLLQINEKHQILQSNR--RIVDLGSSPGSWSQVAARIT 89
+R +SA KL++IN++++I R +VDL ++PG ++QVA +
Sbjct: 2 YRCQSALKLVEINDRYRIFHRFRPSTVVDLAAAPGGFAQVALELM 46
>gi|25121763|ref|NP_740636.1| non structural protein P2 [Salmon pancreas disease virus]
Length = 859
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 21/181 (11%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q+ ++ R+A K ++ ++ S ++DLG++PG + + + V ++
Sbjct: 642 QVHSFKTRAAVKFAELTKR----VSYNSVLDLGAAPGGVTDYCVKKGKT------VTSVS 691
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
G D + G DLV D A P H L
Sbjct: 692 EQWDTKPRGAVVVTADINGPLN-------NLGIFDLVFCDAAGPRRYHHYAQCEDHAVLF 744
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK---KHFQKVIHVKPVASRAESVEMF 219
+A +E GG F+VK + G ++ ++F+ V KPV+SR +VE+F
Sbjct: 745 TSACKHGVERTAKGGVFIVKAY-GMADRRTERAVEGTARYFRSVSVEKPVSSRITNVEVF 803
Query: 220 L 220
Sbjct: 804 F 804
>gi|21321728|ref|NP_647496.1| non-structural polyprotein [Salmon pancreas disease virus]
gi|81993851|sp|Q8JJX1|POLN_SPDV RecName: Full=Non-structural polyprotein; AltName: Full=Polyprotein
nsP1234; Short=P1234; Contains: RecName: Full=P123;
Contains: RecName: Full=mRNA-capping enzyme nsP1;
AltName: Full=Non-structural protein 1; Contains:
RecName: Full=Protease nsP2; AltName: Full=Non-structural
protein 2; Short=nsP2; Contains: RecName:
Full=Non-structural protein 3; Short=nsP3; Contains:
RecName: Full=RNA-directed RNA polymerase nsP4; AltName:
Full=Non-structural protein 4; Short=nsP4
gi|21262138|emb|CAC87721.1| non-structural polyprotein [Salmon pancreas disease virus]
Length = 2601
Score = 59.0 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 21/181 (11%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q+ ++ R+A K ++ ++ S ++DLG++PG + + + V ++
Sbjct: 1204 QVHSFKTRAAVKFAELTKR----VSYNSVLDLGAAPGGVTDYCVKKGKT------VTSVS 1253
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
G D + G DLV D A P H L
Sbjct: 1254 EQWDTKPRGAVVVTADINGPLN-------NLGIFDLVFCDAAGPRRYHHYAQCEDHAVLF 1306
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK---KHFQKVIHVKPVASRAESVEMF 219
+A +E GG F+VK + G ++ ++F+ V KPV+SR +VE+F
Sbjct: 1307 TSACKHGVERTAKGGVFIVKAY-GMADRRTERAVEGTARYFRSVSVEKPVSSRITNVEVF 1365
Query: 220 L 220
Sbjct: 1366 F 1366
>gi|25121754|ref|NP_740654.1| non structural protein P2 [Sleeping disease virus]
Length = 857
Score = 58.6 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q+ ++ R+A K ++ ++ S ++DLG++ G + + + V +
Sbjct: 640 QVHSFKTRAAVKFAELTKR----VSYNSVLDLGAARGGVTDYCVKKGKT------VTCVS 689
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
G D + G DLV D A P H
Sbjct: 690 EQWDSKPRGAVVITADINGPLN-------NLGIFDLVFCDAAGPRRYHHYAQCEDHARRS 742
Query: 163 EAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK---KHFQKVIHVKPVASRAESVEMF 219
+A +E GG F+VK + G ++ ++F+ V KPV+SR +VE+F
Sbjct: 743 TSACKHGVERTAKGGVFIVKAY-GMADRRTERAVECTARYFKSVSVEKPVSSRITNVEVF 801
Query: 220 L 220
Sbjct: 802 F 802
>gi|322491262|emb|CBZ26528.1| ensangp00000010174-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 400
Score = 58.6 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 70/215 (32%), Gaps = 33/215 (15%)
Query: 44 LEGWRARSAYKLLQINEKH-------QILQS-------NRRIVDLGSSPGSWSQVAAR-- 87
+ R+ +KLL+ E ++L+ N D+ PG++SQ +
Sbjct: 84 QRNFSNRAGHKLLESMESTGVWMELSKLLRGKSMKRPRNFSFADVCGGPGAFSQALFQAG 143
Query: 88 --------------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
+ G + + + G+ F +
Sbjct: 144 RRQGWRHLHGYGMTLAGVSGLDWYAHLLKSPQFTCTYGLDGTGDIFKLCNIDCLASITKA 203
Query: 134 GNPDLVLSDMAYPT-IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTN 190
LV++D + + + AL++L GG F++K F +
Sbjct: 204 APMLLVVADGGFNVDFSVANYQETISSRIMYGQWLTALKLLRKGGCFVLKLFDTFSPLSR 263
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+L L +++V KP SR + E +L+ F
Sbjct: 264 AVLYLSCCMYRRVHVAKPRHSRVVNSERYLVCVDF 298
>gi|321398824|emb|CBZ09058.1| ensangp00000010174-like protein [Leishmania infantum JPCM5]
gi|322504045|emb|CBZ39132.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 400
Score = 58.2 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 71/215 (33%), Gaps = 33/215 (15%)
Query: 44 LEGWRARSAYKLLQINEKH-------QILQSNRR-------IVDLGSSPGSWSQVAAR-- 87
+ R+ +KLL+ E ++L+ + D+ PG++SQ +
Sbjct: 84 QRNFSNRAGHKLLESMESTGVWMELSKLLRGKSKKRPRDFAFADVCGGPGAFSQALFQAG 143
Query: 88 --------------ITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIG 133
+ G + + + G+ F + +
Sbjct: 144 RKQGWRQLHGYGMTLAGVSGLDWYAHLLKSPQFTCTYGLDGTGDIFKLSNIECLVSITKA 203
Query: 134 GNPDLVLSDMAYPT-IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTN 190
LV++D + + + AL++L GG F++K F +
Sbjct: 204 APMLLVVADGGFNVDFSVANYQETISSRIMYGQWLAALKLLRNGGCFVLKLFDTFSPLSR 263
Query: 191 DILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+L L +++V KP SR + E +L+ F
Sbjct: 264 AVLYLSCCMYRRVHIAKPRHSRVVNSERYLVCVDF 298
>gi|90103337|gb|ABD85513.1| hypothetical protein [Ictalurus punctatus]
Length = 161
Score = 58.2 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+G + LK F V KP +SR S+E F++ + +
Sbjct: 1 RGKDVTLLYSQLKIFFSMVTCAKPXSSRNSSIEAFVVCQNY 41
>gi|35187153|gb|AAQ84235.1| FtsJ [Histophilus somni]
Length = 47
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 17 VKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
+ + SS WLN H DP+VQ+A + R+R+ +KL +I + +
Sbjct: 1 MGKKKRSASSSRWLNEHFKDPFVQKAHKQKLRSRAYFKLDEIQQSDR 47
>gi|221481727|gb|EEE20103.1| ribosomal RNA methyltransferase, putative [Toxoplasma gondii GT1]
Length = 246
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQS 67
L++ D Y +RA+ EG+RARSAYKLLQ++++ L
Sbjct: 4 LSKDRRDIYYRRAKEEGYRARSAYKLLQLDDELHFLSP 41
>gi|294948258|ref|XP_002785673.1| hypothetical protein Pmar_PMAR025421 [Perkinsus marinus ATCC 50983]
gi|294954903|ref|XP_002788352.1| hypothetical protein Pmar_PMAR026738 [Perkinsus marinus ATCC 50983]
gi|239899696|gb|EER17469.1| hypothetical protein Pmar_PMAR025421 [Perkinsus marinus ATCC 50983]
gi|239903664|gb|EER20148.1| hypothetical protein Pmar_PMAR026738 [Perkinsus marinus ATCC 50983]
Length = 749
Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Query: 124 SWEFIRQA----IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF 179
+ + R G +V +D + + + A+ +L+ GG F
Sbjct: 200 AQDMWRWFGSRATGEKCHVVTADGSMDVQYDPNKQESLCLPIIFRELLLAIGLLHPGGTF 259
Query: 180 LVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++K + + L L F + VKPVAS+ + E + + GFR
Sbjct: 260 VMKAYSLLDDATVAALSLAAFMFDTIEVVKPVASKEANSETYWVCLGFR 308
>gi|167519316|ref|XP_001743998.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777960|gb|EDQ91576.1| predicted protein [Monosiga brevicollis MX1]
Length = 181
Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 55/179 (30%), Gaps = 27/179 (15%)
Query: 70 RIVDLGSSPGSWS----QVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSW 125
R + +PG + + G ++ V E V D D+
Sbjct: 3 RTAHVCEAPGGFIACTSHYLRELHGEELDHDWVGMTLNPHYEDNNPVAMVDSDAWICDTI 62
Query: 126 EFI---------------------RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
E R A G DL D + T L
Sbjct: 63 EHWDFGADDSGDLMQADNVRSLWARVAEIGKVDLFTGDGSVDCQHDPNEQENITAMLHYC 122
Query: 165 ATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
L L GG ++KTF TN ++ LL HF +V KP SRA + E +L+
Sbjct: 123 EAVAGLGCLRRGGAMVLKTFTFFEACTNQLVYLLGVHFDEVWISKPACSRASNAETYLV 181
>gi|281210651|gb|EFA84817.1| D111/G-patch domain-containing protein [Polysphondylium pallidum
PN500]
Length = 763
Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Query: 113 KFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEM 172
+ + ++ +L ++D T G L E+
Sbjct: 435 DIQNEQNIRHFTQMVLKGTNQKGVNLFMADGGISTEGEELNQESILGHLILCQFLTMFEI 494
Query: 173 LNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
L++GG+F+ K F T +L ++ KHF+ VKP SR + E +++AK
Sbjct: 495 LSLGGNFVCKIFDTFTPFTVGLLYIIFKHFESFTIVKPFTSRPLNSERYVIAKNL 549
>gi|215765591|dbj|BAG87288.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 136
Score = 55.9 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 177 GDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
G ++K + K+ F+KV ++P A+R+ S E+F++ +G R
Sbjct: 87 GSLVIKFLENEDIPGFGKFCKEKFKKVSLLRPKATRSSSREIFMVCEGLR 136
>gi|325114479|emb|CBZ50035.1| putative ftsJ-like methyltransferase domain-containing protein
[Neospora caninum Liverpool]
Length = 2132
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 9/116 (7%)
Query: 121 DLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR-------KIDHLRTMSLCEAATFFALEML 173
D+ + + LV++D + L L + FAL +L
Sbjct: 1081 TPDTQDAETYQGVPHVCLVVADGGFHLAIDEKTGRHIENYQELLCARLLLSELLFALMLL 1140
Query: 174 NIGGDFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
GG+F+ K F T T ++ ++ + F+ +KP+ SRA + E +L+ ++
Sbjct: 1141 EEGGNFVCKIFDTFTHFTASLVYIVARLFEDCAIIKPIRSRAANSERYLVGLRLKR 1196
>gi|229892011|sp|P0C968|VF424_ASFK5 RecName: Full=Probable methyltransferase EP424R; Short=pEP424R
Length = 424
Score = 55.5 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK--TFQGGTTNDI 192
L +D + L L L+ GG+ ++K T T +
Sbjct: 221 PIHLYTADGGINVGHDYNKQEELNLKLHFGQALTGLLSLSKGGNMILKHYTLNHAFTLSL 280
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+C+ F+++ KP +SR + E +++ K
Sbjct: 281 ICVFSHFFEELYITKPTSSRPSNSETYIVGKN 312
>gi|169600119|ref|XP_001793482.1| hypothetical protein SNOG_02889 [Phaeosphaeria nodorum SN15]
gi|160705379|gb|EAT89620.2| hypothetical protein SNOG_02889 [Phaeosphaeria nodorum SN15]
Length = 200
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 33/69 (47%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV 203
T G+ DH +M LC AA F+ + L GG FL K +QG LK+ F V
Sbjct: 107 MMNTSGNAFRDHAGSMDLCMAALTFSYDTLKTGGHFLCKFYQGTEEKAFETKLKRLFASV 166
Query: 204 IHVKPVASR 212
KP +SR
Sbjct: 167 HREKPDSSR 175
>gi|170585923|ref|XP_001897731.1| FtsJ-like methyltransferase family protein [Brugia malayi]
gi|158594833|gb|EDP33411.1| FtsJ-like methyltransferase family protein [Brugia malayi]
Length = 902
Score = 55.2 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/209 (12%), Positives = 57/209 (27%), Gaps = 35/209 (16%)
Query: 47 WRARSAYKLLQINEKHQILQSNRR----------------------IVDLGSSPGSWSQV 84
++ R+A K+ ++ + L + + + S
Sbjct: 286 FQNRAAMKMANLDRIYDWLLTGEKPDNVEIKNPMNVEIKNEKCRIATPGKNAGRLSPLFY 345
Query: 85 AARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMA 144
A I T V L + + L + D+
Sbjct: 346 FADICAGPGGFTEYV----LWRKGYYNARGKDDFKLKRFTAASPSYFEPYYGKHNDGDIT 401
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD-------FLVKTFQ--GGTTNDILCL 195
P D + + L L +L + F+ K F + ++ L
Sbjct: 402 KPDNITSFEDEILSKRLYLCQFLTGLSVLRVKNHDTGSGGKFVCKLFDIFTPFSIGLIYL 461
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+ F+++ KP SR + E +++
Sbjct: 462 MYIVFERISIHKPNTSRPANSERYIVCDN 490
>gi|9628163|ref|NP_042749.1| pEP424R [African swine fever virus]
gi|82051434|sp|Q65148|VF424_ASFB7 RecName: Full=Probable methyltransferase EP424R; Short=pEP424R
gi|780425|gb|AAA65285.1| pEP424R [African swine fever virus]
gi|162849265|emb|CAN10155.1| pEP424R [African swine fever virus Benin 97/1]
gi|162849438|emb|CAN10403.1| pEP424R [African swine fever virus OURT 88/3]
gi|291289499|emb|CBH29156.1| BA71V-EP424R [African swine fever virus E75]
gi|1097445|prf||2113434BF EP424R gene
Length = 424
Score = 55.2 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK--TFQGGTTNDI 192
L +D + L L L+ GG+ ++K T T +
Sbjct: 222 PIHLYTADGGINVGHDYNKQEELNLKLHFGQALTGLLSLSKGGNMILKHYTLNHAFTLSL 281
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+C+ F+++ KP +SR + E +++ K
Sbjct: 282 ICVFSHFFEELYITKPTSSRPTNSETYIVGKN 313
>gi|229892012|sp|P0C970|VF424_ASFM2 RecName: Full=Probable methyltransferase EP424R; Short=pEP424R
Length = 424
Score = 54.8 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK--TFQGGTTNDI 192
L +D + L L L+ GG+ ++K T T +
Sbjct: 221 PIHLYTADGGINVGHDYNKQEELNLKLHFGQALTGLLSLSKGGNMILKHYTLNHAFTLSL 280
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+C+ F+++ KP +SR + E +++ K
Sbjct: 281 ICVFSHFFEELYITKPTSSRPTNSETYIVGKN 312
>gi|170060913|ref|XP_001866012.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167879249|gb|EDS42632.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 719
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 128 IRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ-- 185
+ L + D + + + L A+ ++ GG+ ++K F
Sbjct: 222 MAHTGQDGVHLFVCDGGFLLKN--NCQEVISKQLYLVLVMLAVTVIRPGGNAIIKVFDLY 279
Query: 186 GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+ ++ +L + + +V +KP SR + E +++ +
Sbjct: 280 TPFSVGLIFILTRMYARVSILKPCTSRPANSERYVVCQK 318
>gi|229892013|sp|P0C969|VF424_ASFP4 RecName: Full=Probable methyltransferase EP424R; Short=pEP424R
Length = 424
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK--TFQGGTTNDI 192
L +D + L L L+ GG+ ++K T T +
Sbjct: 221 PIHLYTADGGINVGHDYNKQEELNLKLHFGQALTGLLSLSKGGNMILKHYTLNHAFTLSL 280
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+C+ F+++ KP +SR + E +++ K
Sbjct: 281 ICVFSHFFEELYITKPTSSRPTNSETYIVGKN 312
>gi|303398740|emb|CBW46721.1| EP424R [African swine fever virus Georgia 2007/1]
Length = 418
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 2/126 (1%)
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
L + I ++ + L +D +
Sbjct: 187 QSPLLKKNIDYNNGDVTIASNVKNLALRATQRLTPIHLYTADGGINVGHDYNKQEELNLK 246
Query: 161 LCEAATFFALEMLNIGGDFLVK--TFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
L L L+ GG+ ++K T T ++C+ F+++ KP +SR + E
Sbjct: 247 LHFGQALTGLLSLSKGGNMILKHYTLNHAFTLSLICVFSHFFEELYITKPTSSRPTNSET 306
Query: 219 FLLAKG 224
+++ K
Sbjct: 307 YIVGKN 312
>gi|229892014|sp|P0C967|VF424_ASFWA RecName: Full=Probable methyltransferase EP424R; Short=pEP424R
Length = 424
Score = 54.8 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Query: 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVK--TFQGGTTNDI 192
L +D + L L L+ GG+ ++K T T +
Sbjct: 221 PIHLYTADGGINVGHDYNKQEELNLKLHFGQALTGLLSLSKGGNMILKHYTLNHAFTLSL 280
Query: 193 LCLLKKHFQKVIHVKPVASRAESVEMFLLAKG 224
+C+ F+++ KP +SR + E +++ K
Sbjct: 281 ICVFSHFFEELYITKPTSSRPTNSETYIVGKN 312
>gi|312083718|ref|XP_003143979.1| hypothetical protein LOAG_08398 [Loa loa]
gi|307760856|gb|EFO20090.1| hypothetical protein LOAG_08398 [Loa loa]
Length = 827
Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 157 RTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAE 214
+ GG F+ K F + ++ L+ F+++ KP SR
Sbjct: 360 CQFLTGLSVLRVKTRNTVTGGKFVCKLFDIFTPFSVGLIYLMYIVFERISIHKPNTSRPA 419
Query: 215 SVEMFLLAKG 224
+ E +++
Sbjct: 420 NSERYIVCDN 429
>gi|221502672|gb|EEE28392.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 1422
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 3/117 (2%)
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
++F A G DLV +D ++ + T L A L
Sbjct: 266 NIEFIWNHTSREP-RTRDNPAPFGLADLVTADGSFDVQFAPHLQEELTAPLVFAEVVCML 324
Query: 171 EMLNIGGDFLVKTF--QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+LNI G +VK + + IL +L F V+ KP SR + E++ + F
Sbjct: 325 GLLNIRGTGIVKMYGLLSHQSISILAILSMCFNHVVLAKPSMSRPGNSELYAVCLEF 381
>gi|237842511|ref|XP_002370553.1| ftsJ-like methyltransferase domain-containing protein [Toxoplasma
gondii ME49]
gi|211968217|gb|EEB03413.1| ftsJ-like methyltransferase domain-containing protein [Toxoplasma
gondii ME49]
Length = 1422
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 3/117 (2%)
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
++F A G DLV +D ++ + T L A L
Sbjct: 266 NIEFIWNHTSREP-RTRDNPAPFGLADLVTADGSFDVQFAPHLQEELTAPLVFAEVVCML 324
Query: 171 EMLNIGGDFLVKTF--QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+LNI G +VK + + IL +L F V+ KP SR + E++ + F
Sbjct: 325 GLLNIRGTGIVKMYGLLSHQSISILAILSMCFNHVVLAKPSMSRPGNSELYAVCLEF 381
>gi|310831432|ref|YP_003970075.1| putative FtsJ-like methyltransferase [Cafeteria roenbergensis virus
BV-PW1]
gi|309386616|gb|ADO67476.1| putative FtsJ-like methyltransferase [Cafeteria roenbergensis virus
BV-PW1]
Length = 445
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 41/218 (18%)
Query: 49 ARSAYKLLQINEKHQILQ-SNRRIVDLGSSPGSWSQVAAR----------------ITGS 91
+R+ +K+ +I ++ + L PGS+ Q
Sbjct: 101 SRAFFKMWEIMVVFKLADTKDFSYSALAEGPGSFLQAVLHYREKYFELKNNKFHSITINP 160
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFD---------------------FLDLDSWEFIRQ 130
V+ + L K F + ++ +
Sbjct: 161 EDGKNIDVSRNFLGYYEDKYPNLIKPHKTYKSSKASKYKARDTGDLTDFKSISNFRKEIK 220
Query: 131 AIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN 190
+LV +D + L L + GD ++K F+ TT
Sbjct: 221 KTKTFSNLVTADGGF-AWNDENYQEQEAYPLIIGQMLSGLMIQEKNGDMVIKMFETFTTV 279
Query: 191 DIL--CLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
I LL + ++ KP SRA + E +L+ KGF+
Sbjct: 280 SIKLTYLLSTLYNEIYFYKPYFSRASNSERYLILKGFK 317
>gi|221485120|gb|EEE23410.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1422
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 3/117 (2%)
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
++F A G DLV +D ++ + T L A L
Sbjct: 266 NIEFIWNHTSREP-RTRDNPAPFGLADLVTADGSFDVQFAPHLQEELTAPLVFAEVVCML 324
Query: 171 EMLNIGGDFLVKTF--QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+LNI G +VK + + IL +L F V+ KP SR + E++ + F
Sbjct: 325 GLLNIRGTGIVKMYGLLSHQSISILAILSMCFNHVVLAKPSMSRPGNSELYAVCLEF 381
>gi|73972753|ref|XP_864751.1| PREDICTED: similar to CG6379-PA isoform 3 [Canis familiaris]
Length = 880
Score = 54.4 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILC 194
+++D + G + + + L AL ++ GG F+ KTF + ++
Sbjct: 797 HFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSVVRTGGHFICKTFDLFTPFSVGLIY 856
Query: 195 LLKKHFQKVIHVKPVASRAESVEM 218
LL F++V KP+ SR + E
Sbjct: 857 LLYCCFERVCLFKPITSRPANSER 880
>gi|325120770|emb|CBZ56325.1| putative ftsJ-like methyltransferase domain-containing protein
[Neospora caninum Liverpool]
Length = 1307
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
++F G DLV +D ++ + T L A L
Sbjct: 129 NIEFIWNHTSREP-RTRENPTPFGLADLVTADGSFDVQFAPHLQEELTAPLVFAEVVCML 187
Query: 171 EMLNIGGDFLVKTF--QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+LNI G +VK + + IL +L F V+ KP SR + E++ + F
Sbjct: 188 GLLNIKGTGIVKMYGLLSHQSISILAILSMCFNHVVLAKPSMSRPGNSELYAVCLEF 244
>gi|322505403|emb|CBZ14784.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 331
Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K +L + F+ V K +ASR+ES+E +++A F+
Sbjct: 200 PVCFVSKVLHCHHFGQVLRATRALFRHVKTSKLLASRSESLERYVVATDFQ 250
Score = 42.1 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 47 WRARSAYKLLQINEKHQILQSNR--RIVDLGSSPGSWSQVAARIT 89
+R +SA+KLL++N++++I +VDL ++PG ++Q A +
Sbjct: 2 YRCQSAWKLLELNDRYRIFHQFHPSTVVDLAAAPGGFAQAALELM 46
>gi|328771261|gb|EGF81301.1| hypothetical protein BATDEDRAFT_34868 [Batrachochytrium
dendrobatidis JAM81]
Length = 566
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 56/198 (28%), Gaps = 23/198 (11%)
Query: 51 SAYKLLQINEKHQI--------LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
SA KL ++ + D S G +++ R +
Sbjct: 185 SAVKLASLDAQFNFSNIDQKTQNDYGIEFADFCSEYGGFTEYLLWRKQLMRQPARGWGMT 244
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLV-------LSDMAYPTIGHRKIDH 155
+ + + K I G+ D+ +D R +D
Sbjct: 245 LRGEKDYMFKKMIVPPGAFPQLDFEAVYGIDGSGDICNSENIKAFADHVMKATNGRGVDL 304
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVKTFQ--------GGTTNDILCLLKKHFQKVIHVK 207
+ + + L + + ++L +L HF K+ +K
Sbjct: 305 VLADGELDTMHDGMHLENHSHQRMLCQILSMFHILKQVTPLSGELLYILHLHFSKIAILK 364
Query: 208 PVASRAESVEMFLLAKGF 225
P+ASR E +++ +
Sbjct: 365 PLASRPADAERYIICENL 382
>gi|154346754|ref|XP_001569314.1| ensangp00000010174-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|308197110|sp|A4HQI9|MTR1_LEIBR RecName: Full=Cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1; AltName:
Full=Cap1 2'O-ribose methyltransferase 1; Short=MTr1
gi|134066656|emb|CAM44455.1| putative methyltransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 398
Score = 53.2 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 2/89 (2%)
Query: 139 VLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLL 196
V + + AL++L GG ++K F + ++ L
Sbjct: 209 VADGGFSVDFSVANYQETISSRIMYGQWLAALKLLRKGGCCVLKLFDTFSPLSRAVVYLS 268
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAKGF 225
+ +V KP SR + E +L+ F
Sbjct: 269 CFLYSRVHVAKPRHSRVVNSERYLVCVDF 297
>gi|71027093|ref|XP_763190.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350143|gb|EAN30907.1| hypothetical protein, conserved [Theileria parva]
Length = 980
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 58/192 (30%), Gaps = 23/192 (11%)
Query: 51 SAYKLLQINEKHQI---LQSNRRI-------VDLGSSPGSWSQVAARITGSNANNTRV-- 98
+ K +I E +++ L+ N + V + PG++ S N +
Sbjct: 130 AWLKFYEILEVYKLVEYLKPNFKTEGGTLTSVHISECPGAFIASLNHNLKSKNYNGELKW 189
Query: 99 --VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHL 156
+++ V D L ++++ + ++ S H
Sbjct: 190 FATSLNPYYEGNNHNVV-LAEDILLKETYQNWLLGYDNSGNITKSCNIEYIWDHISRPGR 248
Query: 157 RTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLK---KHFQKVIHVKPVASRA 213
S A + F + LK F+++ KP SR
Sbjct: 249 YNKSKQPLLADLATADGSFNCQ-----FDPNNQELLTSPLKFADLCFKRLEVYKPFLSRE 303
Query: 214 ESVEMFLLAKGF 225
+ E++++ F
Sbjct: 304 ANSEVYVICLDF 315
Score = 41.7 bits (96), Expect = 0.073, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 3/116 (2%)
Query: 114 FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCE-AATFFALEM 172
F E + + N D + D + A AL
Sbjct: 718 FNSNQSYKSLIGEILESNLKRNCDFIFCDPYNNVNYRELLYKELNTKYILVAQLIQALNC 777
Query: 173 LNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
LN GD +++ F T ILC L F +VI +P + S E+F++ K ++
Sbjct: 778 LNDNGDLVLRIFSLFTRFTTGILCCLSTVFDEVILYRPESVVNWSQEVFVICKNYK 833
>gi|324502280|gb|ADY41003.1| Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 [Ascaris
suum]
Length = 979
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 137 DLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNI------GGDFLVKTFQ--GGT 188
DL+++D + G I + + L AL ++ GG F K F
Sbjct: 437 DLMMADGGFSVEGKENIQEILSKRLYLCQFLVALSVVRPASASRVGGVFFCKLFDIFTPF 496
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ ++ L+ F+++ KP SR + E +++
Sbjct: 497 SVGLVYLMYIAFKRISLHKPNTSRPANSERYIIC 530
>gi|256599194|gb|ACV04606.1| polyprotein [Cell fusing agent virus]
Length = 3255
Score = 52.5 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 9/185 (4%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
V + + +R KL +I K++ + + R+VDLG G WSQ A ++
Sbjct: 2480 VNETERGDYVSRGGLKLNEIISKYEW-RPSGRVVDLGCGRGGWSQRAV--MEETVSSALG 2536
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRT 158
I + E ++ L + + + D ++ D+ +T
Sbjct: 2537 FTIGGAEKENPQRFVTKGYNLATLKTGVDVHRLTPFRCDTIMCDIGESDPSPI---KEKT 2593
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL--LKKHFQKVIHVKPVASRAESV 216
+L + N G F+ K + + + L+ + V+ SR S
Sbjct: 2594 RTLKVLQLLENWLLANPGAHFVCKILSPYSLEVLRKIESLQHLYNG-RLVRLSHSRNSSA 2652
Query: 217 EMFLL 221
EM+ +
Sbjct: 2653 EMYYV 2657
>gi|221482431|gb|EEE20779.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2173
Score = 51.7 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 9/111 (8%)
Query: 125 WEFIRQAIGGNPDLVLSDMAYPTIGH-------RKIDHLRTMSLCEAATFFALEMLNIGG 177
E R + LV++D + L L + FAL +L GG
Sbjct: 1119 KEAARYQGVSHVCLVVADGGFHLAIDAKTGRHIENYQELLCARLLLSELLFALMLLEEGG 1178
Query: 178 DFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+F+ K F T T ++ ++ + F+ +KP+ SRA + E +L+ +
Sbjct: 1179 NFVCKIFDTFTHFTASLVYIVGRLFEDCAILKPIRSRAANSERYLVGLRLK 1229
>gi|302856385|ref|XP_002959586.1| hypothetical protein VOLCADRAFT_101083 [Volvox carteri f.
nagariensis]
gi|300254840|gb|EFJ39349.1| hypothetical protein VOLCADRAFT_101083 [Volvox carteri f.
nagariensis]
Length = 136
Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 198 KHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F KV+ KP S+ + E++++ KGFR
Sbjct: 87 CLFDKVLVYKPATSKPANSEVYVVGKGFR 115
>gi|221504479|gb|EEE30152.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 2173
Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 174 NIGGDFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG+F+ K F T T ++ ++ + F+ +KP+ SRA + E +L+ +
Sbjct: 1175 EEGGNFVCKIFDTFTHFTASLVYIVGRLFEDCAILKPIRSRAANSERYLVGLRLK 1229
>gi|237841379|ref|XP_002369987.1| ftsJ-like methyltransferase domain-containing protein [Toxoplasma
gondii ME49]
gi|211967651|gb|EEB02847.1| ftsJ-like methyltransferase domain-containing protein [Toxoplasma
gondii ME49]
Length = 2173
Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 174 NIGGDFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
GG+F+ K F T T ++ ++ + F+ +KP+ SRA + E +L+ +
Sbjct: 1175 EEGGNFVCKIFDTFTHFTASLVYIVGRLFEDCAILKPIRSRAANSERYLVGLRLK 1229
>gi|9627243|ref|NP_041725.1| cell fusing agent polyprotein [Cell fusing agent virus]
gi|464429|sp|P33515|POLG_MCFA RecName: Full=Genome polyprotein; Contains: RecName: Full=Protein C;
AltName: Full=Capsid protein; AltName: Full=Core protein;
Contains: RecName: Full=Small envelope protein M;
AltName: Full=Matrix protein; Contains: RecName:
Full=Envelope protein E; Contains: RecName:
Full=Non-structural protein 1; Short=NS1; Contains:
RecName: Full=Non-structural protein 2A; Short=NS2A;
Contains: RecName: Full=Serine protease subunit NS2B;
AltName: Full=Flavivirin protease NS2B regulatory
subunit; AltName: Full=Non-structural protein 2B;
Contains: RecName: Full=Serine protease NS3; AltName:
Full=Flavivirin protease NS3 catalytic subunit; AltName:
Full=Non-structural protein 3; Contains: RecName:
Full=Non-structural protein 4A; Short=NS4A; Contains:
RecName: Full=Non-structural protein 4B; Short=NS4B;
Contains: RecName: Full=RNA-directed RNA polymerase NS5;
AltName: Full=NS5
gi|336191|gb|AAA48509.1| cell fusing agent polyprotein [Flavivirus sp.]
Length = 3341
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 9/185 (4%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
V + + +R KL +I K++ + + R+VDLG G WSQ A ++
Sbjct: 2487 VNETERGDYVSRGGLKLNEIISKYEW-RPSGRVVDLGCGRGGWSQRAV--MEETVSSALG 2543
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRT 158
I + E ++ L + + + D ++ D+ +T
Sbjct: 2544 FTIGGAEKENPQRFVTKGYNLATLKTGVDVHRLTPFRCDTIMCDIGESDPSPI---KEKT 2600
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL--LKKHFQKVIHVKPVASRAESV 216
+L ++N G F+ K + + + L+ + V+ SR SV
Sbjct: 2601 RTLKVLQLLENWLLVNPGAHFVCKILSPYSLEVLRKIESLQHLYNG-RLVRLSHSRNSSV 2659
Query: 217 EMFLL 221
EM+ +
Sbjct: 2660 EMYYI 2664
>gi|254688377|ref|YP_003029843.1| polyprotein [Aedes flavivirus]
gi|251823440|dbj|BAH83667.1| polyprotein [Aedes flavivirus]
Length = 3341
Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 9/185 (4%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
V + +R KL +I K+Q +VDLG G WSQ +
Sbjct: 2487 VNETGKGDYVSRGGLKLDEIIRKYQWTPMG-HVVDLGCGRGGWSQRVV--MEETVTSVHG 2543
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRT 158
I D E ++ L + + D ++ D+ + RT
Sbjct: 2544 FTIGGNDKENPQRFVTRGYNLTSLKPGVDVYKLEPKRCDTIMCDIGE---SDPNLTKERT 2600
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV--IHVKPVASRAESV 216
+L +N F+ K + ++L ++ QK V+ SR +
Sbjct: 2601 RTLKVLQLLETWLSINPEAQFVCKVL-SPYSLEVLRKVESLQQKYKGKLVRLAHSRNSTA 2659
Query: 217 EMFLL 221
EM+ +
Sbjct: 2660 EMYYI 2664
>gi|30316449|gb|AAO24117.1| polyprotein precursor [Kamiti River virus]
Length = 3357
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 70/192 (36%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + + +R KL ++ K+ + N R+VDLG G WSQ
Sbjct: 2496 DKYKVRGVNETERGDYVSRGGLKLDEVIRKYNW-KPNGRVVDLGCGRGGWSQRVV--MEE 2552
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ ++ + + E ++ +L S + + D ++ D+
Sbjct: 2553 SVSSVYGYTVGGQEKEVPQKFLTKGYNLTNLKSGVDVYRLPPTRCDTIMCDIGESDPNPA 2612
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI--HVKPV 209
+T +L +N +F+ K + ++L ++ QK V+
Sbjct: 2613 ---KEKTRTLKVLELLENWLSVNPSAEFVCKIL-SPYSLEVLRKIETLQQKHKGRLVRLT 2668
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2669 YSRNSTAEMYYV 2680
>gi|33620714|ref|NP_891560.1| polyprotein precursor [Kamiti River virus]
gi|30316442|gb|AAO24118.1| polyprotein precursor [Kamiti River virus]
Length = 3357
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 70/192 (36%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + + +R KL ++ K+ + N R+VDLG G WSQ
Sbjct: 2496 DKYKVRGVNETERGDYVSRGGLKLDEVIRKYNW-KPNGRVVDLGCGRGGWSQRVV--MEE 2552
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ ++ + + E ++ +L S + + D ++ D+
Sbjct: 2553 SVSSVYGYTVGGQEKEVPQKFLTKGYNLTNLKSGVDVYRLPPTRCDTIMCDIGESDPNPA 2612
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI--HVKPV 209
+T +L +N +F+ K + ++L ++ QK V+
Sbjct: 2613 ---KEKTRTLKVLELLENWLSVNPSAEFVCKIL-SPYSLEVLRKIETLQQKHKGRLVRLT 2668
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2669 YSRNSTAEMYYV 2680
>gi|90416124|ref|ZP_01224056.1| ribosomal RNA large subunit methyltransferase J [marine gamma
proteobacterium HTCC2207]
gi|90331849|gb|EAS47063.1| ribosomal RNA large subunit methyltransferase J [marine gamma
proteobacterium HTCC2207]
Length = 38
Score = 49.8 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 190 NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ + ++ F V KP ASR++S E++++AKG +
Sbjct: 1 DEFVRHVRTLFNTVSMRKPDASRSKSREVYMVAKGLK 37
>gi|218677613|ref|ZP_03525510.1| putative ribosomal RNA methyltransferase/cell division FtsJ protein
[Rhizobium etli CIAT 894]
Length = 42
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/31 (74%), Positives = 30/31 (96%)
Query: 196 LKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+K++F++V+HVKP ASRAESVEMFLLAKGF+
Sbjct: 1 MKQNFRQVVHVKPNASRAESVEMFLLAKGFK 31
>gi|27735349|ref|NP_776048.1| putative non-structural protein NS5; RNA-dependent RNA polymerase;
methyltransferase component of capping enzyme [Cell
fusing agent virus]
Length = 888
Score = 49.4 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 9/185 (4%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
V + + +R KL +I K++ + + R+VDLG G WSQ A ++
Sbjct: 34 VNETERGDYVSRGGLKLNEIISKYEW-RPSGRVVDLGCGRGGWSQRAV--MEETVSSALG 90
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRT 158
I + E ++ L + + + D ++ D+ +T
Sbjct: 91 FTIGGAEKENPQRFVTKGYNLATLKTGVDVHRLTPFRCDTIMCDIGESDPSPI---KEKT 147
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCL--LKKHFQKVIHVKPVASRAESV 216
+L ++N G F+ K + + + L+ + V+ SR SV
Sbjct: 148 RTLKVLQLLENWLLVNPGAHFVCKILSPYSLEVLRKIESLQHLYNG-RLVRLSHSRNSSV 206
Query: 217 EMFLL 221
EM+ +
Sbjct: 207 EMYYI 211
>gi|254688388|ref|YP_003084132.1| putative NS5 protein [Aedes flavivirus]
Length = 887
Score = 49.0 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 9/185 (4%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
V + +R KL +I K+Q +VDLG G WSQ +
Sbjct: 33 VNETGKGDYVSRGGLKLDEIIRKYQWTPMG-HVVDLGCGRGGWSQRVV--MEETVTSVHG 89
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRT 158
I D E ++ L + + D ++ D+ + RT
Sbjct: 90 FTIGGNDKENPQRFVTRGYNLTSLKPGVDVYKLEPKRCDTIMCDIGE---SDPNLTKERT 146
Query: 159 MSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV--IHVKPVASRAESV 216
+L +N F+ K + ++L ++ QK V+ SR +
Sbjct: 147 RTLKVLQLLETWLSINPEAQFVCKVL-SPYSLEVLRKVESLQQKYKGKLVRLAHSRNSTA 205
Query: 217 EMFLL 221
EM+ +
Sbjct: 206 EMYYI 210
>gi|229904920|ref|YP_002884239.1| polyprotein precursor [Quang Binh virus]
gi|229270301|gb|ACQ55297.1| polyprotein precursor [Quang Binh virus]
Length = 3359
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 61/192 (31%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + +R K+ ++ K+Q + VDLG G WSQ +
Sbjct: 2497 DQYRSRGVNETDKGDYVSRGGLKMDELLRKYQW-EPKGVAVDLGCGRGGWSQRLVMDSRI 2555
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+A + + + + K L + + + ++ D+
Sbjct: 2556 SAVHGFTLGGNNRENPQPFRTKGHNLATLKAGVD--VYAEPPKDCNTIVCDIGESDSRG- 2612
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV--IHVKPV 209
D RT +L N F K ++L L+ K V+
Sbjct: 2613 --DVERTRTLKVLGLLEKWLEHNPNAAFACKVL-SPYHIEVLRKLETLQHKYGGRVVRLS 2669
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2670 YSRNSTAEMYYI 2681
>gi|89071363|ref|ZP_01158496.1| hypothetical protein OG2516_15874 [Oceanicola granulosus
HTCC2516]
gi|89043140|gb|EAR49384.1| hypothetical protein OG2516_15874 [Oceanicola granulosus
HTCC2516]
Length = 53
Score = 48.6 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GSSSRRGLTQKVKNR-SCQGSSRDWLNRHINDPYVQ 40
G S RG+T KVK + + SSR WL R +NDPYV+
Sbjct: 4 GRSDSRGMTVKVKKKRGLKLSSRRWLERQLNDPYVR 39
>gi|37695589|ref|NP_937780.1| NS5 protein [Kamiti River virus]
Length = 887
Score = 48.2 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/192 (18%), Positives = 70/192 (36%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + + +R KL ++ K+ + N R+VDLG G WSQ
Sbjct: 26 DKYKVRGVNETERGDYVSRGGLKLDEVIRKYNW-KPNGRVVDLGCGRGGWSQRVV--MEE 82
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
+ ++ + + E ++ +L S + + D ++ D+
Sbjct: 83 SVSSVYGYTVGGQEKEVPQKFLTKGYNLTNLKSGVDVYRLPPTRCDTIMCDIGESDPNPA 142
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI--HVKPV 209
+T +L +N +F+ K + ++L ++ QK V+
Sbjct: 143 ---KEKTRTLKVLELLENWLSVNPSAEFVCKIL-SPYSLEVLRKIETLQQKHKGRLVRLT 198
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 199 YSRNSTAEMYYV 210
>gi|169600121|ref|XP_001793483.1| hypothetical protein SNOG_20029 [Phaeosphaeria nodorum SN15]
gi|160705380|gb|EDP89875.1| hypothetical protein SNOG_20029 [Phaeosphaeria nodorum SN15]
Length = 83
Score = 48.2 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
W +R D + + A+++G ++R+A+KLL++
Sbjct: 52 TRWKSRQGKDFFAREARVQGLKSRAAFKLLEV 83
>gi|321459159|gb|EFX70215.1| hypothetical protein DAPPUDRAFT_217428 [Daphnia pulex]
Length = 300
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
+ ++ + + + + +LV +D + + L T AL +L+ GG
Sbjct: 185 NIMEWCNVKAMLKKPHHQVNLVTADGSVDCADNPGEQENYLAPLHWCETISALLILSNGG 244
Query: 178 DFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVE 217
F++K F + +L LL F+++ KP S+ + E
Sbjct: 245 SFILKMFTLFEHTSVSLLYLLMISFEELHVFKPCTSKEGNSE 286
>gi|284032696|ref|YP_003382627.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Kribbella flavida DSM
17836]
gi|283811989|gb|ADB33828.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Kribbella flavida DSM
17836]
Length = 334
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 40 QRAQLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARI------TGSN 92
+ A+ + +RS +KL + + ++ L+ R +DLG+SPG W+++ +
Sbjct: 166 RLARSDERVSRSEFKLEEAIQTFRLDLRPGGRALDLGASPGGWTRILRQYEQEVWSVDPG 225
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
A + R+ + +FF+ + + D+ + V+ D
Sbjct: 226 ALDPRLDTDRRIHHVATTAGEFFRRNQVRFDAVVNDMRMDQVMSARVMLDAVPHLRR 282
>gi|291334186|gb|ADD93853.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S08-C1340]
Length = 51
Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 22 CQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEK 61
+ ++W+N+H D YV+ +Q +R+R+ +KL +I E
Sbjct: 9 AKRKYKNWVNKHSKDRYVKLSQTGNYRSRAFHKLHEIQEN 48
>gi|297539963|gb|ACV04605.2| polyprotein [Nakiwogo virus]
Length = 3373
Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 71/217 (32%), Gaps = 11/217 (5%)
Query: 7 SSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQ 66
S GL + K Q S R ++ + V + +R K+ ++ KH +
Sbjct: 2488 KSDTGGLGFRWKKSLNQLSERQFMAYKVRG--VNETDKGDYVSRGGLKMNELINKHGW-E 2544
Query: 67 SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWE 126
VDLG G WSQ + + + E + ++ +L +
Sbjct: 2545 PRGTAVDLGCGRGGWSQRLV--MDHRVAEVKGFTLGGNNRENPQPFQTKGYNLANLKAGV 2602
Query: 127 FIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG 186
+ + + ++ D+ D RT ++ N G F K
Sbjct: 2603 DVHALKPFSCNTIICDIGESDARP---DVERTRTMKVLNLLEQWLNENPGAAFCCKVL-S 2658
Query: 187 GTTNDILCLLKKHFQKV--IHVKPVASRAESVEMFLL 221
++L L+ K V+ SR + EM+ +
Sbjct: 2659 PYHLEVLRKLEALQHKYDGRLVRLSYSRNSTAEMYYI 2695
>gi|258568504|ref|XP_002584996.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906442|gb|EEP80843.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 209
Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 185 QGGTTNDILCLLKKHFQKVIHVKPVASRA 213
G + L+ FQKV KP +SR
Sbjct: 169 MGSEDQLLENRLRSLFQKVYREKPDSSRK 197
>gi|294495319|ref|YP_003541812.1| RNA-binding S4 domain protein [Methanohalophilus mahii DSM 5219]
gi|292666318|gb|ADE36167.1| RNA-binding S4 domain protein [Methanohalophilus mahii DSM 5219]
Length = 218
Score = 45.9 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 27/181 (14%)
Query: 50 RSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI--TGSNANNTRVVAID-ILDM 106
R +KL I EK +++ ++DLGSS G + A + +R +
Sbjct: 58 RGYFKLRNIQEKFDLIKEGDSVLDLGSSAGGFLMFACELGANAVGIEYSRHFRSELGRLA 117
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
+ D + + + G D++L+DM EA
Sbjct: 118 YENPNITIILDDVFTMPT----SKIPGSPFDVLLTDMTLEPEA-----------SIEALG 162
Query: 167 FFALEMLNIGGDF-LVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAES--VEMFLLAK 223
+ G F ++K +G N ++ +K +V+ V +S E +++AK
Sbjct: 163 KVLPLLKEGGMIFQVIKLGRGRNKNRLVENIKSLGIEVLEV------LDSAQREFYVVAK 216
Query: 224 G 224
Sbjct: 217 K 217
>gi|11499766|ref|NP_071009.1| hypothetical protein AF2184 [Archaeoglobus fulgidus DSM 4304]
gi|2648341|gb|AAB89068.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 208
Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
R R +KL +I+E + N ++DLGSS G + A+
Sbjct: 55 RPRGYWKLKEIDEHFNLFSGNEVVLDLGSSAGGFLLYASEKAKE 98
>gi|213407428|ref|XP_002174485.1| SAM-dependent methyltransferase [Schizosaccharomyces japonicus
yFS275]
gi|212002532|gb|EEB08192.1| SAM-dependent methyltransferase [Schizosaccharomyces japonicus
yFS275]
Length = 284
Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 42/236 (17%), Positives = 69/236 (29%), Gaps = 70/236 (29%)
Query: 55 LLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKF 114
+ QI K+ I + N+ ++DLG +PG W++ AA RV+ +D++ F
Sbjct: 47 IRQIQRKYNIFKPNQLVLDLGCAPGYWNRYAASHVKP---FGRVIGLDVVPCHVDRNSSF 103
Query: 115 FKFDFLDLDSWEFIRQAIGGNPD------------------------------------- 137
+ FL + +
Sbjct: 104 LQGSFLSSGVQHELIRMAVRAQQLRDVKQVGSSKDYATILTELQHSEDMYTKLSYSDVQV 163
Query: 138 -LVLSDMAYP---------------------TIGHRKIDHLRTMSLCEAATFFALEMLNI 175
+VLSD+ P + ++ L AA L
Sbjct: 164 DVVLSDLMAPLPRNAPFEPRFVRNAYKTMLLSKQLAVDSCKDSILLAHAALVLCFRSLKQ 223
Query: 176 GGDFLVKTFQGGTTNDILCLLKKHFQKVI----HVKPVASRAESVEMFLLAKGFRK 227
G F+ K +G T L F+ V P A S +F + G R+
Sbjct: 224 SGIFVCKVLRGDETFAFRDNLLLTFETVHQVSCFRDPQA---RSQTVF-ICFGKRE 275
>gi|159900817|ref|YP_001547064.1| THUMP domain-containing protein [Herpetosiphon aurantiacus ATCC
23779]
gi|159893856|gb|ABX06936.1| THUMP domain protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 354
Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 40 QRAQLEGWRARSAYKLLQINEKHQILQSNR-RIVDLGSSPGSWSQVAAR 87
+ A+ +G +R+ +KLL+ I + + +DLG++PG W+++ R
Sbjct: 174 RFAREQGQLSRAEFKLLEAQALFNIEWPDHGQALDLGAAPGGWTRILRR 222
>gi|315646606|ref|ZP_07899724.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus vortex
V453]
gi|315278249|gb|EFU41569.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus vortex
V453]
Length = 358
Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARI 88
V+ + EG +R+ +KLL+ ++ I S R+ +D+G++PG W+
Sbjct: 189 VRFQREEGQISRAKFKLLEAEKQFGIPFDSFRKALDIGAAPGGWTSFLLER 239
>gi|261406224|ref|YP_003242465.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus sp.
Y412MC10]
gi|261282687|gb|ACX64658.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus sp.
Y412MC10]
Length = 358
Score = 45.5 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARI 88
V+ + EG +R+ +KLL+ ++ I + R+ VD+G++PG W+
Sbjct: 189 VRFQREEGQISRAKFKLLEAEKQFGIPFDTFRKAVDIGAAPGGWTSFLLER 239
>gi|311977903|ref|YP_003987023.1| hypothetical protein MIMI_gp0550 [Acanthamoeba polyphaga mimivirus]
gi|82000090|sp|Q5UQ71|YL511_MIMIV RecName: Full=Uncharacterized protein L511
gi|55417125|gb|AAV50775.1| unknown [Acanthamoeba polyphaga mimivirus]
gi|308204444|gb|ADO18245.1| putative FtsJ-like methyltransferase [Acanthamoeba polyphaga
mimivirus]
Length = 788
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 31/203 (15%), Positives = 63/203 (31%), Gaps = 27/203 (13%)
Query: 51 SAYKLLQINEKH-QILQSNRRI--VDLGSSPGSWS---------------QVAARITGSN 92
+ KL +I + I+ + L +PG++ A +
Sbjct: 490 AWIKLYEILNEFPDIIPKKESVKSFHLCEAPGAFVSATHHYMYSLGCELDWYAQTLNPMY 549
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPD-----LVLSDMAYPT 147
N ++ + P + K + + I ++ N + D
Sbjct: 550 ENKALDDHYGLMSLYPDKWLFGSKNNNTGDITSSEIIKSYASNKQLSNIDFMTGDAGIYC 609
Query: 148 IG-HRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF---QGGTTNDILCLLKKHFQKV 203
+ L L+ G + KTF +L LL F+++
Sbjct: 610 RPNCLNEQETVMAKINMGQIVCILACLSKGRSAVFKTFLPLTEPLNISLLNLLSSIFEEL 669
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
I KP AS + E++++ K ++
Sbjct: 670 IFYKPGASNGSNSEIYIVLKSYK 692
>gi|329930851|ref|ZP_08284250.1| ribosomal RNA large subunit methyltransferase J [Paenibacillus sp.
HGF5]
gi|328934553|gb|EGG31058.1| ribosomal RNA large subunit methyltransferase J [Paenibacillus sp.
HGF5]
Length = 358
Score = 45.1 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARI 88
V+ + EG +R+ +KLL+ ++ I + R+ VD+G++PG W+
Sbjct: 189 VRFQREEGQISRAKFKLLEAEKQFGIPFDTFRKAVDIGAAPGGWTSFLLER 239
>gi|42522232|ref|NP_967612.1| methyltransferase [Bdellovibrio bacteriovorus HD100]
gi|39574763|emb|CAE78605.1| methyltransferase [Bdellovibrio bacteriovorus HD100]
Length = 300
Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 9/137 (6%)
Query: 49 ARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
+R+ KL ++ + I + +R+VD GS PG W+ V + G + ++ +
Sbjct: 144 SRAYLKLWELFTVYGIKPKKGQRVVDFGSCPGGWTWVL-QTVGCEVVSIDRAPLEP-HIA 201
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
+ GVKF K + ++ + G D SD+ ++ S +
Sbjct: 202 ALPGVKFMKTNAFNVKPEDI------GAIDWFFSDIICYPEKLLELVQNWQASGLCSNFV 255
Query: 168 FALEMLNIGGDFLVKTF 184
++ +K F
Sbjct: 256 CTIKFQGKTDYETLKKF 272
>gi|147921289|ref|YP_684897.1| putative ribosomal RNA methyltransferase [uncultured methanogenic
archaeon RC-I]
gi|110620293|emb|CAJ35571.1| putative ribosomal RNA methyltransferase [uncultured methanogenic
archaeon RC-I]
Length = 216
Score = 44.8 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 60/176 (34%), Gaps = 19/176 (10%)
Query: 52 AYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILG 111
+KL I + IL+ R++D+GSS G + A+ I A+ + EP+
Sbjct: 59 YFKLKGIQNQSGILRPGDRVLDIGSSAGGFLMYASGI----ADEIVGIEYSEEFREPLEA 114
Query: 112 VKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
V + L F V+ + I+ + L+
Sbjct: 115 VMEEYPNVKVLFGDAFNMDLTPLGEFDVILNDMT-VEPAMSIEIMARFLPLLRGGGRVLQ 173
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLL-KKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++K + L LL KK + V + R E E +++A+ R
Sbjct: 174 --------VLKLDKISDVEPFLILLEKKGLEIVKVI-----RPEKREAYVIARPKR 216
>gi|253576737|ref|ZP_04854064.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251843947|gb|EES71968.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 459
Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 43 QLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARI 88
+ EG +R+ +KLL+ I +S +D+G++PG W+
Sbjct: 294 KEEGQISRAKFKLLEAEATFGIPFESFHEALDIGAAPGGWTSFLLER 340
>gi|325119988|emb|CBZ55541.1| FtsJ methyltransferase domain-containing protein 2, related
[Neospora caninum Liverpool]
Length = 1368
Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGT--TNDILCLLKKHFQKVIHVKPV 209
L T L + A ++L GG F+ F T T +L L F++V VKP
Sbjct: 341 NYQELLTGRLLLSEFLIAFQLLQQGGTFICTVFDSFTAFTASLLYLCTALFEEVYMVKP- 399
Query: 210 ASRAE--SVEMFLLAKGFRK 227
SR + E L+A FR+
Sbjct: 400 -SRNRWTNSERQLVALKFRR 418
>gi|239831305|ref|ZP_04679634.1| hemolysin A [Ochrobactrum intermedium LMG 3301]
gi|239823572|gb|EEQ95140.1| hemolysin A [Ochrobactrum intermedium LMG 3301]
Length = 253
Score = 44.4 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 2/136 (1%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL+ + + R +D+G+S G ++QV G+N V D L
Sbjct: 66 YVSRAALKLIAALDHFGLDVKGRTALDIGASTGGFTQVLLER-GANHVLAIDVGHDQLHE 124
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
+ + L+ + EF G D V+SD+++ ++ L
Sbjct: 125 TLRADPRVTNKEGLNARALEFS-DLDGREIDCVVSDVSFISLKLALPAALAFAQKGAICA 183
Query: 167 FFALEMLNIGGDFLVK 182
G + + K
Sbjct: 184 LLVKPQFEAGREAIGK 199
>gi|20093782|ref|NP_613629.1| 23S rRNA methylase [Methanopyrus kandleri AV19]
gi|19886692|gb|AAM01559.1| Predicted 23S rRNA methylase containing THUMP domain [Methanopyrus
kandleri AV19]
Length = 357
Score = 44.4 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 10/110 (9%)
Query: 39 VQRAQLE--GWR--ARSAYKLLQINEKHQ-ILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
V+R + G R +R+ KL ++ ++H I++ ++DLG++PG WS AR
Sbjct: 169 VKRVRKWSPGMRPISRAQLKLRELLKRHPYIVREGSDVIDLGAAPGGWSYELARRVEPGT 228
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM 143
+ + V K E I G LV SD+
Sbjct: 229 VYAVDPGDLHPKVLKLDNVVHLKKRAE-----ELTEDDIEGRIRLVTSDL 273
>gi|298241873|ref|ZP_06965680.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ktedonobacter racemifer
DSM 44963]
gi|297554927|gb|EFH88791.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Ktedonobacter racemifer
DSM 44963]
Length = 363
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 7/164 (4%)
Query: 42 AQLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
AQ E +R+ +KLL+ E I L + +DLG++PG W+++ + + + V
Sbjct: 183 AQTEEQISRAEFKLLEALEVFHITLPEQGKALDLGAAPGGWTRL---LLNAGLDVVAVDP 239
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
++ + + + DL+++DM ++ +
Sbjct: 240 ANLDPRLRAYRGLEHYQGYTERYLDAQAQLKHFTRFDLIVNDMKMDAREAARLLARASAQ 299
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
L ++ L + + T N+ L ++KHF V
Sbjct: 300 LRPEGFIISVFKLPHATESINPL---KTMNEALKTMRKHFNIVR 340
>gi|310642360|ref|YP_003947118.1| ribosomal RNA methyltransferase rrmj/ftsj [Paenibacillus polymyxa
SC2]
gi|309247310|gb|ADO56877.1| Ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus polymyxa
SC2]
Length = 282
Score = 44.4 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 55/166 (33%), Gaps = 9/166 (5%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARITGSNANNTR 97
V+ + +G +R+ +KLL+ I + + +D+G++PG W+ G
Sbjct: 111 VRFQKEDGQISRAKFKLLEAEATFGIDFSAFHQGLDIGAAPGGWTSFLLER-GLKVTAVD 169
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLR 157
++ M+ + F + + ++ E + + + + D L
Sbjct: 170 PAKMEPSLMKY-ANLTFLRKNASEVKFKENSFDLLVCDMSW-----SPKQMARLVTDLLY 223
Query: 158 TMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI-LCLLKKHFQK 202
++ A M + + + + K+ F
Sbjct: 224 SLRSGGTAIVTVKLMHKKPLALIHDVIASFEESGMQIQRAKQLFHN 269
>gi|308069316|ref|YP_003870921.1| SAM-dependent methyltransferase [Paenibacillus polymyxa E681]
gi|305858595|gb|ADM70383.1| Predicted SAM-dependent methyltransferase [Paenibacillus polymyxa
E681]
Length = 352
Score = 44.0 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 55/166 (33%), Gaps = 9/166 (5%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARITGSNANNTR 97
V+ + +G +R+ +KLL+ I + + +D+G++PG W+ G
Sbjct: 181 VRFQKEDGQISRAKFKLLEAEATFGIDFGAFHQGLDIGAAPGGWTSFLLER-GLKVTAVD 239
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLR 157
++ M+ + F + + ++ E + + + + D L
Sbjct: 240 PAKMEPSLMKY-ANLTFLRKNASEVKFKENSFDLLVCDMSW-----SPKQMARLVTDLLY 293
Query: 158 TMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI-LCLLKKHFQK 202
++ A M + + + + K+ F
Sbjct: 294 SLRSGGTAIVTVKLMHKKPLALIHDVIASFEESGMQIQRAKQLFHN 339
>gi|323522318|gb|ADX94786.1| polyprotein [Culex flavivirus]
Length = 3363
Score = 44.0 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + +R K+ ++ K Q + +DLG G W+Q T
Sbjct: 2501 DKYRSRGVNETDKGDFVSRGGLKMDELIRKFQW-EPKGAALDLGCGRGGWTQRLVMDTRV 2559
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
N+ + + K L + + + ++ D+
Sbjct: 2560 NSVMGLTLGGANRENPLPFKTKGHNLAVLKAGVD--VYALEPRDCNTIVCDIGESDPRPE 2617
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV--IHVKPV 209
+T +L + N G F K ++L L+ K V+
Sbjct: 2618 VE---KTRTLKVLTMLEKWLVHNPGAAFCCKVL-SPYHLEVLRKLEMLQHKHNGKLVRLS 2673
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2674 LSRNSTAEMYYI 2685
>gi|159108568|ref|XP_001704554.1| Methyltransferase, putative [Giardia lamblia ATCC 50803]
gi|157432620|gb|EDO76880.1| Methyltransferase, putative [Giardia lamblia ATCC 50803]
Length = 416
Score = 43.6 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 80/226 (35%), Gaps = 43/226 (19%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRI-------------VDLGSSPGSWSQVAARITG 90
+ R++ KL+Q+++ + S+ I DL S+PG WS
Sbjct: 100 RKNQLNRASDKLIQLDDAVPFVGSSPSISTGTQPEGPDLLFADLCSAPGGWSYTILERFP 159
Query: 91 SNANNTRVVAIDILDMEPIL----------------------GVKFFKFDFLDLDSWEFI 128
++ D + G + + L +
Sbjct: 160 RARGVAMSLSADGGKVGLTWDPRLEPFISSRRLKTTLGVDGTGSVYNPDNVTLLTQLHAV 219
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS------LCEAATFFALEMLNIGGDFLVK 182
+ + G L L+D + G H+ + L + L +L G+ +VK
Sbjct: 220 ARELHGPYALFLADGGFLIEGPGGRRHVEHLQESIVAKLLYSEVVAGLRLLKHSGNMVVK 279
Query: 183 TFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F T T+ +L LL F+ + VKP SR + E +++A+G++
Sbjct: 280 MFGSCTVLTSHLLYLLLVCFRDLHIVKPGRSRIVNEEKYIVARGYK 325
>gi|219944307|gb|ACL54956.1| polyprotein [Culex flavivirus]
Length = 3363
Score = 43.6 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 60/192 (31%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + +R K+ ++ +K Q + +DLG G W+Q T
Sbjct: 2501 DKYRSRGVNETDKGDFVSRGGLKMDELIKKFQW-EPKGAALDLGCGRGGWTQRLVMDTRV 2559
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
N+ + + K L + + + ++ D+
Sbjct: 2560 NSVTGLTLGGANRENPLPFQTKGHNLAVLKAGVD--VYALEPRDCNTIVCDIGESDPRPE 2617
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV--IHVKPV 209
+T +L + N G F K ++L L+ K V+
Sbjct: 2618 VE---KTRTLKVLTMLEKWLVHNPGAAFCCKVL-SPYHLEVLRKLEMLQHKHNGKLVRLS 2673
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2674 LSRNSTAEMYYV 2685
>gi|247893527|gb|ACT09359.1| polyprotein [Culex flavivirus]
Length = 3363
Score = 43.6 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + +R K+ ++ K Q + +DLG G W+Q T
Sbjct: 2501 DKYRSRGVNETDKGDFVSRGGLKMDELIRKFQW-EPKGAALDLGCGRGGWTQRLVMDTRV 2559
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
N+ + + K L + + + ++ D+
Sbjct: 2560 NSVTGLTLGGANRENPLPFKTKGHNLAVLKAGVD--VYALEPRDCNTIVCDIGESDPRPE 2617
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV--IHVKPV 209
+T +L + N G F K ++L L+ K V+
Sbjct: 2618 VE---KTRTLKVLTMLEKWLVHNPGAAFCCKVL-SPYHLEVLRKLEMLQHKHNGKLVRLS 2673
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2674 LSRNSTAEMYYV 2685
>gi|166197627|dbj|BAG06229.1| polyprotein [Culex flavivirus]
Length = 3363
Score = 43.6 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + +R K+ ++ K Q + +DLG G W+Q T
Sbjct: 2501 DKYRSRGVNETDKGDFVSRGGLKMDELIRKFQW-EPKGAALDLGCGRGGWTQRLVMDTRV 2559
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
N+ + + K L + + + ++ D+
Sbjct: 2560 NSVTGLTLGGANRENPLPFKTKGHNLAVLKAGVD--VYALEPRDCNTIVCDIGESDPRPE 2617
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV--IHVKPV 209
+T +L + N G F K ++L L+ K V+
Sbjct: 2618 VE---KTRTLKVLTMLEKWLVHNPGAAFCCKVL-SPYHLEVLRKLEMLQHKHNGKLVRLS 2673
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2674 LSRNSTAEMYYV 2685
>gi|256599190|gb|ACV04604.1| polyprotein [Culex flavivirus]
Length = 3363
Score = 43.6 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + +R K+ ++ K Q + +DLG G W+Q T
Sbjct: 2501 DKYRSRGVNETDKGDFVSRGGLKMDELIRKFQW-EPRGAALDLGCGRGGWTQRLVMDTRV 2559
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
N+ + + K L + + + ++ D+
Sbjct: 2560 NSVTGLTLGGASRENPVPFKTKGHNLAVLKAGVD--VYALEPRDCNTIVCDIGESDPRPE 2617
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV--IHVKPV 209
+T +L + N G F K ++L L+ K V+
Sbjct: 2618 VE---KTRTLKVLTMLEKWLIHNPGAAFCCKVL-SPYHLEVLRKLEMLQHKHDGKLVRLS 2673
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2674 LSRNSTAEMYYV 2685
>gi|88607828|ref|YP_505407.1| hypothetical protein APH_0830 [Anaplasma phagocytophilum HZ]
gi|88598891|gb|ABD44361.1| hypothetical protein APH_0830 [Anaplasma phagocytophilum HZ]
Length = 58
Score = 43.6 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 19/52 (36%)
Query: 175 IGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ K + + F + P +SR ++ E++L A F+
Sbjct: 6 PSSSLVAKLLHREYEQEFKRSIMMCFDIFLRFNPKSSRKDTSEIYLAALKFK 57
>gi|215274031|gb|ACJ64914.1| polyprotein [Culex flavivirus]
Length = 3363
Score = 43.2 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + +R K+ ++ K Q + +DLG G W+Q T
Sbjct: 2501 DKYRSRGVNETDKGDFVSRGGLKMDELIRKFQW-EPRGAALDLGCGRGGWTQRLVMDTRV 2559
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
N+ + + K L + + + ++ D+
Sbjct: 2560 NSVTGLTLGGASRENPLPFKTKGHNLAVLKAGVD--VYALEPRDCNTIVCDIGESDPRPE 2617
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV--IHVKPV 209
+T +L + N G F K ++L L+ K V+
Sbjct: 2618 VE---KTRTLKVLTMLEKWLIHNPGAAFCCKVL-SPYHLEVLRKLEMLQHKHDGKLVRLS 2673
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2674 LSRNSTAEMYYV 2685
>gi|159107412|ref|XP_001703986.1| Methyltransferase, putative [Giardia lamblia ATCC 50803]
gi|157432032|gb|EDO76312.1| Methyltransferase, putative [Giardia lamblia ATCC 50803]
Length = 416
Score = 43.2 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 79/226 (34%), Gaps = 43/226 (19%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRI-------------VDLGSSPGSWSQVAARITG 90
+ R++ KL+Q+++ + S+ I DL S+PG WS
Sbjct: 100 RKNQLNRASDKLIQLDDAVPFVGSSPSISTGTQPEGPDLLFADLCSAPGGWSYTILERFP 159
Query: 91 SNANNTRVVAIDILDMEPIL----------------------GVKFFKFDFLDLDSWEFI 128
++ D + G + + L
Sbjct: 160 RARGVAMSLSADGGKVGLTWDPRLEPFISSRRLKTTLGVDGTGSVYNPDNVTLLTQLHAA 219
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS------LCEAATFFALEMLNIGGDFLVK 182
+ + G L L+D + G H+ + L + L +L G+ +VK
Sbjct: 220 VRELHGPYALFLADGGFLIEGPGGRRHVEHLQESIVAKLLYSEVVAGLRLLKHSGNMVVK 279
Query: 183 TFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F T T+ +L LL FQ + VKP SR + E +++A+G++
Sbjct: 280 MFGSCTVLTSHLLYLLLVCFQDLHTVKPGRSRIVNEEKYIVARGYK 325
>gi|323454467|gb|EGB10337.1| hypothetical protein AURANDRAFT_62766 [Aureococcus anophagefferens]
Length = 373
Score = 43.2 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 54/170 (31%), Gaps = 7/170 (4%)
Query: 36 DPYVQRAQLEGW-RARSAYKLLQINEKHQI---LQSNRRIVDLGSSPGSWSQVAARITGS 91
D V ++ +G +R+ +KL + + L R+VD+G+SPG WSQ+ +
Sbjct: 173 DDAVIASKRDGHAVSRAYFKLREAADVFGFGARLGDGARVVDVGASPGGWSQLCLERGAA 232
Query: 92 NANNTRVVAID-ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
A+D L G + + A GG D + D
Sbjct: 233 LVAAVDPGALDASLLDAYGGGALVHVRARVQESTAALAAAAAGGRFDACVCDANAHPAAA 292
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
++ L L + K G + L + F
Sbjct: 293 LRLLAPAVCPLLRRGAALVLTLKQPTAT--NKHADGEFAEVLAALAEHGF 340
>gi|166159178|ref|YP_899469.2| polyprotein [Culex flavivirus]
gi|166157428|dbj|BAF36740.2| polyprotein [Culex flavivirus]
Length = 3363
Score = 43.2 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 60/192 (31%), Gaps = 13/192 (6%)
Query: 36 DPY----VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
D Y V + +R K+ ++ K Q + +DLG G W+Q T
Sbjct: 2501 DKYRSRGVNETDKGDFVSRGGLKMDELIRKFQW-EPKGAALDLGCGRGGWTQRLVMDTRV 2559
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
N+ + + K L + + + + ++ D+
Sbjct: 2560 NSVTGLTLGGANRENPLPFKTKGHNLAVLKAGVDVYATE--PRDCNTIVCDIGESDPRPE 2617
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKV--IHVKPV 209
+T +L + N G F K ++L L+ K V+
Sbjct: 2618 VE---KTRTLKVLTMLEKWLVHNPGAAFCCKVL-SPYHLEVLRKLEMLQHKHNGKLVRLS 2673
Query: 210 ASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2674 LSRNSTAEMYYV 2685
>gi|89888079|ref|YP_512254.1| large protein [Beilong virus]
gi|73747812|gb|AAZ82812.1| large protein [Beilong virus]
Length = 2172
Score = 42.8 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 6/135 (4%)
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLR 157
+V+ + + F+ +W + + V + + +
Sbjct: 1815 LVSHNNPRDMGLEHDIKVLFNGKPECTWVGDMECFSYLMNSVEAHTLALVHNDMESSLEK 1874
Query: 158 TMSLCEAATFFALEM----LNIGGDFLVKT--FQGGTTNDILCLLKKHFQKVIHVKPVAS 211
+ +L + G ++ K G ++ +L LL +F +V P S
Sbjct: 1875 SPETILLEQVHSLCIAVNLTKDDGLYITKVAPRSGDMSHILLSLLYHYFSEVTCFIPAYS 1934
Query: 212 RAESVEMFLLAKGFR 226
+ S E +L+ G +
Sbjct: 1935 NSCSPECYLVCSGKK 1949
>gi|70922686|ref|XP_734470.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56507240|emb|CAH84195.1| hypothetical protein PC300900.00.0 [Plasmodium chabaudi chabaudi]
Length = 176
Score = 42.8 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQ--------SNRRIVDLGSSPGSWSQVAARITGSNAN 94
+ G+RARS+YKL+QIN+K +I + +N V + + + + +
Sbjct: 1 KENGYRARSSYKLIQINDKFEIFKLFNPSNYNNNDIGVVVNKYNDEFCYNIVDLCAAPGS 60
Query: 95 NTRVVAIDIL--DMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
++V+ L + + +LD+ E + + +D I
Sbjct: 61 WSQVLKNICLYNYYNMLYFINKNNNMNSELDTLEHEEFVKNFSLYINFNDTLEKKIDKFL 120
Query: 153 IDHLRTMS 160
++ +
Sbjct: 121 KNNNHQIK 128
>gi|306845066|ref|ZP_07477646.1| hemolysin A [Brucella sp. BO1]
gi|306274481|gb|EFM56276.1| hemolysin A [Brucella sp. BO1]
Length = 253
Score = 42.8 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL+ + + R +D+G+S G ++QV G++ V D L
Sbjct: 66 YVSRAALKLVAALDHFDLNVKGRTALDIGASTGGFTQVLLER-GAHHVIAIDVGHDQLHE 124
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
+ + ++ + E D V+SD+++ ++ L
Sbjct: 125 SLRHDPRVTSKEGVNARALELA-HLDTRAVDCVVSDVSFISLRLALPPALALAEKGAICA 183
Query: 167 FFALEMLNIGGDFLVK 182
G + + K
Sbjct: 184 LLVKPQFEAGREAIGK 199
>gi|251796645|ref|YP_003011376.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus sp. JDR-2]
gi|247544271|gb|ACT01290.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus sp. JDR-2]
Length = 339
Score = 42.8 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 12/163 (7%)
Query: 43 QLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAI 101
+ EG +R+ +KLL+ + + R VD+G++PG W+ + R + +
Sbjct: 174 REEGQISRAKFKLLEAEREFGLDYSMFRSAVDIGAAPGGWTSLLLE---------RGLRV 224
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM--AYPTIGHRKIDHLRTM 159
+D + L + G+ DL++ DM + + +D T+
Sbjct: 225 TAIDPGDMHPSLAGHPALTYLKRNASEVKFKPGSFDLLVCDMSWSPMQMCRLVLDLEETL 284
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
+ +A M + + + +T I+ K+ F
Sbjct: 285 APHASAIITIKLMHKKPLQTIREVKERFSTAFIIKRAKQLFHN 327
>gi|254718615|ref|ZP_05180426.1| Cell division protein FtsJ [Brucella sp. 83/13]
gi|265983592|ref|ZP_06096327.1| hemolysin A [Brucella sp. 83/13]
gi|306839867|ref|ZP_07472665.1| hemolysin A [Brucella sp. NF 2653]
gi|264662184|gb|EEZ32445.1| hemolysin A [Brucella sp. 83/13]
gi|306405053|gb|EFM61334.1| hemolysin A [Brucella sp. NF 2653]
Length = 253
Score = 42.8 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL+ + + R +D+G+S G ++QV G++ V D L
Sbjct: 66 YVSRAALKLVAALDHFDLDVKGRTALDIGASTGGFTQVLLER-GAHHVIAIDVGHDQLHE 124
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
+ + ++ + E D V+SD+++ ++ L
Sbjct: 125 SLRHDPRVTSKEGVNARALELA-HLDTRAVDCVVSDVSFISLRLALPPALALAEKGAICA 183
Query: 167 FFALEMLNIGGDFLVK 182
G + + K
Sbjct: 184 LLVKPQFEAGREAIGK 199
>gi|306842278|ref|ZP_07474940.1| hemolysin A [Brucella sp. BO2]
gi|306287586|gb|EFM59037.1| hemolysin A [Brucella sp. BO2]
Length = 253
Score = 42.4 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL+ + + R +D+G+S G ++QV G++ V D L
Sbjct: 66 YVSRAALKLVAALDHFDLDVKGRTALDIGASTGGFTQVLLER-GAHHVIAIDVGHDQLHE 124
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
+ + ++ + E D V+SD+++ ++ L
Sbjct: 125 SLRHDPRVTSKEGVNARALELA-HLDTRAVDCVVSDVSFISLRLALPPALALAEKGAICA 183
Query: 167 FFALEMLNIGGDFLVK 182
G + + K
Sbjct: 184 LLVKPQFEAGREAIGK 199
>gi|153007893|ref|YP_001369108.1| hemolysin A [Ochrobactrum anthropi ATCC 49188]
gi|151559781|gb|ABS13279.1| hemolysin A [Ochrobactrum anthropi ATCC 49188]
Length = 253
Score = 42.4 bits (98), Expect = 0.042, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL+ + ++ R +D+G+S G ++QV G++ V D L
Sbjct: 66 YVSRAALKLIAALDHFELDVKGRTALDIGASTGGFTQVLLER-GASHVLAIDVGHDQLHE 124
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ + L+ + E G D V+SD+++
Sbjct: 125 TLRADPRVTNKEGLNARALELS-HLDGREIDCVVSDVSF 162
>gi|254693218|ref|ZP_05155046.1| Cell division protein FtsJ [Brucella abortus bv. 3 str. Tulya]
gi|261213461|ref|ZP_05927742.1| hemolysin A [Brucella abortus bv. 3 str. Tulya]
gi|260915068|gb|EEX81929.1| hemolysin A [Brucella abortus bv. 3 str. Tulya]
Length = 253
Score = 42.4 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL+ + + R +D+G+S G ++QV G++ V D L
Sbjct: 66 YVSRAALKLVAALDHFDLNVKGRTALDIGASTGGFTQVLLER-GAHHVIAIDVGHDQLHE 124
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
+ + ++ + E D ++SD+++ ++ L
Sbjct: 125 SLRHDPRVTSKEGVNARALELA-HLDTCAVDCIVSDVSFISLRLALPPALALAEKGAICA 183
Query: 167 FFALEMLNIGGDFLVK 182
G + + K
Sbjct: 184 LLVKPQFEAGREAIGK 199
>gi|118589267|ref|ZP_01546673.1| hemolysin-like protein [Stappia aggregata IAM 12614]
gi|118437967|gb|EAV44602.1| hemolysin-like protein [Stappia aggregata IAM 12614]
Length = 246
Score = 42.4 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD 105
G+ +R+A KL++ ++ + + R +D+G+S G ++QV G++ + V L
Sbjct: 59 GYVSRAALKLIEGLDRFGVDPAGRICLDIGASTGGFTQVLLER-GADKVHAIDVGHGQLH 117
>gi|240850083|ref|YP_002971476.1| hemolysin A [Bartonella grahamii as4aup]
gi|240267206|gb|ACS50794.1| hemolysin A [Bartonella grahamii as4aup]
Length = 247
Score = 42.4 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R+A KL+ + I+ +D+G+S G ++QV ++ V
Sbjct: 58 AQNYVSRAALKLIAALDAFPIITDKVTAIDVGASTGGFTQVLLERGSAHVIAVDVGHHQF 117
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
D + G DL++SD+++
Sbjct: 118 DKRLLGNSAITLLEGLNVRDFQ--HKHLGGREIDLIVSDVSF 157
>gi|308158282|gb|EFO61037.1| Methyltransferase, putative [Giardia lamblia P15]
Length = 434
Score = 42.4 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 75/225 (33%), Gaps = 43/225 (19%)
Query: 44 LEGWRARSAYKLLQINEKHQIL-------------QSNRRIVDLGSSPGSWSQVAARITG 90
+ R++ KL+Q+++ + + DL S+PG WS
Sbjct: 118 QKNQLNRASDKLIQLDDVVPFVGSSPSISAKTQPEDPDLLFADLCSAPGGWSYTILERFP 177
Query: 91 SNANNTRVVAIDILDMEPIL----------------------GVKFFKFDFLDLDSWEFI 128
++ + G + + L
Sbjct: 178 GARGVAMSLSSGGGKIGLTWDPRLEPFISSRRLKTTLGVDGTGSVYNPDNVSLLAQLHAA 237
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS------LCEAATFFALEMLNIGGDFLVK 182
+ + G L L+D + G H+ + L + L +L G+ ++K
Sbjct: 238 ARELHGPYALFLADGGFLIEGPSGKRHVEHLQESIVAKLLYSEVVAGLRLLRHSGNMVIK 297
Query: 183 TFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
F T T+ +L LL F+ + VKP SR + E +++A+G+
Sbjct: 298 MFGSCTVLTSHLLYLLLACFRDLHIVKPGRSRIVNEEKYIVARGY 342
>gi|15604410|ref|NP_220927.1| hemolysin (tlyA) [Rickettsia prowazekii str. Madrid E]
gi|3861104|emb|CAA15004.1| HEMOLYSIN (tlyA) [Rickettsia prowazekii]
gi|292572174|gb|ADE30089.1| Hemolysin A [Rickettsia prowazekii Rp22]
Length = 251
Score = 42.4 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 16 KVKNRSCQ-GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
KV N+ + S +NRH D V+ Q + +R A KL+ + +I N +D+
Sbjct: 30 KVHNKHEKLIKSGIKVNRHDPDIKVKLPQ-HNYVSRGALKLITALDYFKIDPQNLVCIDI 88
Query: 75 GSSPGSWSQVAARI 88
GSS G +++V
Sbjct: 89 GSSTGGFTEVLFER 102
>gi|20177456|ref|NP_619758.1| polyprotein [Modoc virus]
gi|18958163|emb|CAC82912.1| polyprotein [Modoc virus]
Length = 3374
Score = 42.4 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 9/176 (5%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
+R KL I+E+ + +VDLG G WS AA + N + + E
Sbjct: 2532 VSRGTAKLAWIDERGGVELKG-SVVDLGCGRGGWSYYAA--SQPNVREVKAYTLGTSGHE 2588
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
V+ F ++ + S +R+ D VL D+ + +L
Sbjct: 2589 KPRLVETFGWNLITFKSKVDVRKMEPFQADTVLCDIGESNPTAAVE---ASRTLTVLNVI 2645
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLK--KHFQKVIHVKPVASRAESVEMFLL 221
N G F VK + + + L+K + F + P+ SR + EM+ +
Sbjct: 2646 SRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQRRFGGGLIRVPL-SRNSTHEMYFV 2700
>gi|218185452|gb|EEC67879.1| hypothetical protein OsI_35517 [Oryza sativa Indica Group]
Length = 152
Score = 42.1 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 52 AYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILG 111
A+KLLQ++ + + L + ++DL ++PG W QVA A V + PI G
Sbjct: 2 AFKLLQLDARFRFLPTALAVLDLCAAPGGWVQVAVNHAPVGAFVVSVDLV------PIRG 55
Query: 112 VKFFKFDFLDLDSWEFI 128
D
Sbjct: 56 AHSLTEDITTTKCHAAQ 72
>gi|308162665|gb|EFO65049.1| Methyltransferase, putative [Giardia lamblia P15]
Length = 445
Score = 42.1 bits (97), Expect = 0.054, Method: Composition-based stats.
Identities = 39/225 (17%), Positives = 75/225 (33%), Gaps = 43/225 (19%)
Query: 44 LEGWRARSAYKLLQINEKHQIL-------------QSNRRIVDLGSSPGSWSQVAARITG 90
+ R++ KL+Q+++ + + DL S+PG WS
Sbjct: 129 QKNQLNRASDKLIQLDDAVPFVGSRPSISAKTQPEDPDLLFADLCSAPGGWSYTILERFP 188
Query: 91 SNANNTRVVAIDILDMEPIL----------------------GVKFFKFDFLDLDSWEFI 128
++ + G + + L
Sbjct: 189 GARGVAMSLSSGGGKVGLTWDPRLEPFISSRRLKTTLGVDGTGSVYNPDNVSLLAQLHAA 248
Query: 129 RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS------LCEAATFFALEMLNIGGDFLVK 182
+ + G L L+D + G H+ + L + L +L G+ ++K
Sbjct: 249 ARELHGPYALFLADGGFLIEGPSGKRHVEHLQESIVAKLLYSEVVAGLRLLRHSGNMVIK 308
Query: 183 TFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
F T T+ +L LL F+ + VKP SR + E +++A+G+
Sbjct: 309 MFGSCTVLTSHLLYLLLACFRDLHIVKPGRSRIVNEEKYIVARGY 353
>gi|23501338|ref|NP_697465.1| hemolysin A [Brucella suis 1330]
gi|62289422|ref|YP_221215.1| hemolysin A [Brucella abortus bv. 1 str. 9-941]
gi|82699349|ref|YP_413923.1| cell division protein FtsJ [Brucella melitensis biovar Abortus
2308]
gi|161618409|ref|YP_001592296.1| hemolysin A [Brucella canis ATCC 23365]
gi|189023673|ref|YP_001934441.1| Cell division protein FtsJ [Brucella abortus S19]
gi|225626945|ref|ZP_03784984.1| hemolysin A [Brucella ceti str. Cudo]
gi|237814910|ref|ZP_04593908.1| hemolysin A [Brucella abortus str. 2308 A]
gi|254688735|ref|ZP_05151989.1| Cell division protein FtsJ [Brucella abortus bv. 6 str. 870]
gi|254696863|ref|ZP_05158691.1| Cell division protein FtsJ [Brucella abortus bv. 2 str. 86/8/59]
gi|254701242|ref|ZP_05163070.1| Cell division protein FtsJ [Brucella suis bv. 5 str. 513]
gi|254703789|ref|ZP_05165617.1| Cell division protein FtsJ [Brucella suis bv. 3 str. 686]
gi|254707834|ref|ZP_05169662.1| Cell division protein FtsJ [Brucella pinnipedialis M163/99/10]
gi|254709585|ref|ZP_05171396.1| Cell division protein FtsJ [Brucella pinnipedialis B2/94]
gi|254729768|ref|ZP_05188346.1| Cell division protein FtsJ [Brucella abortus bv. 4 str. 292]
gi|256031077|ref|ZP_05444691.1| Cell division protein FtsJ [Brucella pinnipedialis M292/94/1]
gi|256060571|ref|ZP_05450739.1| Cell division protein FtsJ [Brucella neotomae 5K33]
gi|256159141|ref|ZP_05456962.1| Cell division protein FtsJ [Brucella ceti M490/95/1]
gi|256254480|ref|ZP_05460016.1| Cell division protein FtsJ [Brucella ceti B1/94]
gi|256256982|ref|ZP_05462518.1| Cell division protein FtsJ [Brucella abortus bv. 9 str. C68]
gi|256368892|ref|YP_003106398.1| hemolysin A [Brucella microti CCM 4915]
gi|260168208|ref|ZP_05755019.1| hemolysin A [Brucella sp. F5/99]
gi|260545826|ref|ZP_05821567.1| cell division protein FtsJ [Brucella abortus NCTC 8038]
gi|260566958|ref|ZP_05837428.1| cell division protein FtsJ [Brucella suis bv. 4 str. 40]
gi|260754214|ref|ZP_05866562.1| hemolysin A [Brucella abortus bv. 6 str. 870]
gi|260757434|ref|ZP_05869782.1| hemolysin A [Brucella abortus bv. 4 str. 292]
gi|260761259|ref|ZP_05873602.1| hemolysin A [Brucella abortus bv. 2 str. 86/8/59]
gi|260883239|ref|ZP_05894853.1| hemolysin A [Brucella abortus bv. 9 str. C68]
gi|261221653|ref|ZP_05935934.1| hemolysin A [Brucella ceti B1/94]
gi|261315321|ref|ZP_05954518.1| hemolysin A [Brucella pinnipedialis M163/99/10]
gi|261317113|ref|ZP_05956310.1| hemolysin A [Brucella pinnipedialis B2/94]
gi|261324566|ref|ZP_05963763.1| hemolysin A [Brucella neotomae 5K33]
gi|261751781|ref|ZP_05995490.1| hemolysin A [Brucella suis bv. 5 str. 513]
gi|261754436|ref|ZP_05998145.1| hemolysin A [Brucella suis bv. 3 str. 686]
gi|261757669|ref|ZP_06001378.1| cell division protein FtsJ [Brucella sp. F5/99]
gi|265988150|ref|ZP_06100707.1| hemolysin A [Brucella pinnipedialis M292/94/1]
gi|265997615|ref|ZP_06110172.1| hemolysin A [Brucella ceti M490/95/1]
gi|294851815|ref|ZP_06792488.1| hemolysin [Brucella sp. NVSL 07-0026]
gi|297247835|ref|ZP_06931553.1| hemolysin [Brucella abortus bv. 5 str. B3196]
gi|23347229|gb|AAN29380.1| hemolysin A [Brucella suis 1330]
gi|62195554|gb|AAX73854.1| TlyA, hemolysin A [Brucella abortus bv. 1 str. 9-941]
gi|82615450|emb|CAJ10419.1| Cell division protein FtsJ:RNA-binding S4:Hemolysin A [Brucella
melitensis biovar Abortus 2308]
gi|161335220|gb|ABX61525.1| hemolysin A [Brucella canis ATCC 23365]
gi|189019245|gb|ACD71967.1| Cell division protein FtsJ [Brucella abortus S19]
gi|225618602|gb|EEH15645.1| hemolysin A [Brucella ceti str. Cudo]
gi|237789747|gb|EEP63957.1| hemolysin A [Brucella abortus str. 2308 A]
gi|255999050|gb|ACU47449.1| hemolysin A [Brucella microti CCM 4915]
gi|260097233|gb|EEW81108.1| cell division protein FtsJ [Brucella abortus NCTC 8038]
gi|260156476|gb|EEW91556.1| cell division protein FtsJ [Brucella suis bv. 4 str. 40]
gi|260667752|gb|EEX54692.1| hemolysin A [Brucella abortus bv. 4 str. 292]
gi|260671691|gb|EEX58512.1| hemolysin A [Brucella abortus bv. 2 str. 86/8/59]
gi|260674322|gb|EEX61143.1| hemolysin A [Brucella abortus bv. 6 str. 870]
gi|260872767|gb|EEX79836.1| hemolysin A [Brucella abortus bv. 9 str. C68]
gi|260920237|gb|EEX86890.1| hemolysin A [Brucella ceti B1/94]
gi|261296336|gb|EEX99832.1| hemolysin A [Brucella pinnipedialis B2/94]
gi|261300546|gb|EEY04043.1| hemolysin A [Brucella neotomae 5K33]
gi|261304347|gb|EEY07844.1| hemolysin A [Brucella pinnipedialis M163/99/10]
gi|261737653|gb|EEY25649.1| cell division protein FtsJ [Brucella sp. F5/99]
gi|261741534|gb|EEY29460.1| hemolysin A [Brucella suis bv. 5 str. 513]
gi|261744189|gb|EEY32115.1| hemolysin A [Brucella suis bv. 3 str. 686]
gi|262552083|gb|EEZ08073.1| hemolysin A [Brucella ceti M490/95/1]
gi|264660347|gb|EEZ30608.1| hemolysin A [Brucella pinnipedialis M292/94/1]
gi|294820404|gb|EFG37403.1| hemolysin [Brucella sp. NVSL 07-0026]
gi|297175004|gb|EFH34351.1| hemolysin [Brucella abortus bv. 5 str. B3196]
Length = 253
Score = 42.1 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL+ + + R +D+G+S G ++QV G++ V D L
Sbjct: 66 YVSRAALKLVAALDHFDLNVKGRTALDIGASTGGFTQVLLER-GAHHVIAIDVGHDQLHE 124
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
+ + ++ + E D ++SD+++ ++ L
Sbjct: 125 SLRHDPRVTSKEGVNARALELA-HLDTRAVDCIVSDVSFISLRLALPPALALAEKGAICA 183
Query: 167 FFALEMLNIGGDFLVK 182
G + + K
Sbjct: 184 LLVKPQFEAGREAIGK 199
>gi|163842717|ref|YP_001627121.1| hemolysin A [Brucella suis ATCC 23445]
gi|163673440|gb|ABY37551.1| hemolysin A [Brucella suis ATCC 23445]
Length = 238
Score = 42.1 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL+ + + R +D+G+S G ++QV G++ V D L
Sbjct: 51 YVSRAALKLVAALDHFDLNVKGRTALDIGASTGGFTQVLLER-GAHHVIAIDVGHDQLHE 109
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
+ + ++ + E D ++SD+++ ++ L
Sbjct: 110 SLRHDPRVTSKEGVNARALELA-HLDTRAVDCIVSDVSFISLRLALPPALALAEKGAICA 168
Query: 167 FFALEMLNIGGDFLVK 182
G + + K
Sbjct: 169 LLVKPQFEAGREAIGK 184
>gi|254433345|ref|ZP_05046853.1| hypothetical protein NOC27_276 [Nitrosococcus oceani AFC27]
gi|207089678|gb|EDZ66949.1| hypothetical protein NOC27_276 [Nitrosococcus oceani AFC27]
Length = 310
Score = 42.1 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 8/123 (6%)
Query: 49 ARSAYKLLQINEKH-------QILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+R+ KL + + + LQ + VDLG++PG W+ R A + +A
Sbjct: 186 SRATLKLEEAWQVFLTPDQRRKWLQPGMKAVDLGAAPGGWTWQMVRRGIRVTAVDNGAIA 245
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + + F + +++ I P V A + +
Sbjct: 246 PSLLESGLVDHRQTDAFHYTPRHFADWMVCDIVEKPRRVAQLAAKWLANKWCRQCIFNLK 305
Query: 161 LCE 163
L
Sbjct: 306 LYL 308
>gi|145349055|ref|XP_001418956.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579186|gb|ABO97249.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 514
Score = 42.1 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 10/150 (6%)
Query: 37 PYVQRAQLEGWR------ARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARIT 89
+ +L+ +R R+ +KL + + ++ ++ + VD+G++PG W+QV +
Sbjct: 318 AFYFPLKLQDYRVEVKPLCRAYFKLHEALLRGRVPIEGDWNCVDIGAAPGGWTQVLSERL 377
Query: 90 GSNANNTRVVAIDILDMEPILGVKF-FKFDFLDLDSWEFIRQAIGGNPDLVLSD--MAYP 146
+ A L+ P + E ++ G LV+ D M
Sbjct: 378 TTGCVWAIDPAEITLNPFPTTMTHLRVLAEDAVETVREGLQSTASGELRLVVCDANMHPE 437
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIG 176
+D S + +
Sbjct: 438 ACLRIALDFSTKFSSMKESWLVMSTKNFCK 467
>gi|148559255|ref|YP_001258457.1| hemolysin A [Brucella ovis ATCC 25840]
gi|148370512|gb|ABQ60491.1| hemolysin A [Brucella ovis ATCC 25840]
Length = 253
Score = 41.7 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL+ + + R +D+G+S G ++QV G++ V D L
Sbjct: 66 YVSRAALKLVAALDHFDLNVKGRTALDIGASTGGFTQVLLER-GAHHVIAIDVGHDQLHE 124
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ + ++ + E D ++SD+++
Sbjct: 125 SLRHDPRVTSKEGVNARALELA-HLDTRAVDCIVSDVSF 162
>gi|58427938|gb|AAW76975.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 357
Score = 41.7 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 192 SRSALKLDEALLTLLTPEEREALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 251
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 252 AHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 311
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + ++ F+ ++ K+ +
Sbjct: 312 LPMKKRWD-------ETRLCLELFEQQAEKSLIVRAKQLY 344
>gi|17987780|ref|NP_540414.1| hemolysin [Brucella melitensis bv. 1 str. 16M]
gi|225851973|ref|YP_002732206.1| hemolysin A [Brucella melitensis ATCC 23457]
gi|256044154|ref|ZP_05447061.1| hemolysin A [Brucella melitensis bv. 1 str. Rev.1]
gi|256112957|ref|ZP_05453865.1| hemolysin A [Brucella melitensis bv. 3 str. Ether]
gi|256264519|ref|ZP_05467051.1| cell division protein FtsJ [Brucella melitensis bv. 2 str. 63/9]
gi|260563511|ref|ZP_05833997.1| cell division protein FtsJ [Brucella melitensis bv. 1 str. 16M]
gi|265990566|ref|ZP_06103123.1| hemolysin A [Brucella melitensis bv. 1 str. Rev.1]
gi|265994396|ref|ZP_06106953.1| hemolysin A [Brucella melitensis bv. 3 str. Ether]
gi|17983504|gb|AAL52678.1| hemolysin [Brucella melitensis bv. 1 str. 16M]
gi|225640338|gb|ACO00252.1| hemolysin A [Brucella melitensis ATCC 23457]
gi|260153527|gb|EEW88619.1| cell division protein FtsJ [Brucella melitensis bv. 1 str. 16M]
gi|262765509|gb|EEZ11298.1| hemolysin A [Brucella melitensis bv. 3 str. Ether]
gi|263001350|gb|EEZ13925.1| hemolysin A [Brucella melitensis bv. 1 str. Rev.1]
gi|263094852|gb|EEZ18590.1| cell division protein FtsJ [Brucella melitensis bv. 2 str. 63/9]
gi|326408469|gb|ADZ65534.1| hemolysin A [Brucella melitensis M28]
gi|326538186|gb|ADZ86401.1| hemolysin A [Brucella melitensis M5-90]
Length = 253
Score = 41.7 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL+ + + R +D+G+S G ++QV G++ V D L
Sbjct: 66 YVSRAALKLVAALDHFDLNVKGRTALDIGASTGGFTQVLLER-GAHHVIAIDVGHDQLHE 124
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ + ++ + E D ++SD+++
Sbjct: 125 SLRHDPRVTSKEGVNARALELA-HLDTRAVDCIVSDVSF 162
>gi|84625171|ref|YP_452543.1| putative RNA 2'-O-ribose methyltransferase [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|123521072|sp|Q2NZK8|RLMM_XANOM RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|84369111|dbj|BAE70269.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 347
Score = 41.7 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEEREALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 242 AHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + ++ F+ ++ K+ +
Sbjct: 302 LPMKKRWD-------ETRLCLELFEQQAEKSLIVRAKQLY 334
>gi|122879286|ref|YP_202360.6| putative RNA 2'-O-ribose methyltransferase [Xanthomonas oryzae pv.
oryzae KACC10331]
gi|84029360|sp|Q5GWE6|RLMM_XANOR RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
Length = 347
Score = 41.7 bits (96), Expect = 0.075, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEEREALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 242 AHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + ++ F+ ++ K+ +
Sbjct: 302 LPMKKRWD-------ETRLCLELFEQQAEKSLIVRAKQLY 334
>gi|325926036|ref|ZP_08187400.1| putative SAM-dependent methyltransferase [Xanthomonas perforans
91-118]
gi|325543562|gb|EGD14981.1| putative SAM-dependent methyltransferase [Xanthomonas perforans
91-118]
Length = 347
Score = 41.7 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 56/160 (35%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEERDALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 242 EHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + F+ ++ K+ +
Sbjct: 302 LPMKKRWDETRLCLD-------LFEQQAEKSLIVRAKQLY 334
>gi|78046480|ref|YP_362655.1| putative RNA 2'-O-ribose methyltransferase [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|123585802|sp|Q3BX58|RLMM_XANC5 RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|78034910|emb|CAJ22555.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 347
Score = 41.7 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 56/160 (35%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEERDALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 242 EHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + F+ ++ K+ +
Sbjct: 302 LPMKKRWDETRLCLD-------LFEQQAEKSLIVRAKQLY 334
>gi|253747795|gb|EET02302.1| Methyltransferase, putative [Giardia intestinalis ATCC 50581]
Length = 420
Score = 41.7 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 41/229 (17%), Positives = 78/229 (34%), Gaps = 46/229 (20%)
Query: 44 LEGWRARSAYKLLQINEKHQIL----------------QSNRRIVDLGSSPGSWSQVAAR 87
+ R++ KL+Q+++ + + DL S+PG WS
Sbjct: 101 RKNQLNRASDKLIQLDDAVPFVGASPSVSSASAQPDSGSPDLLFADLCSAPGGWSYTLLD 160
Query: 88 ITGSNANNTRVVAIDILDMEPIL----------------------GVKFFKFDFLDLDSW 125
++ G + + L
Sbjct: 161 RFPGARGVAMSLSPGDGTAGLTWDPRLDRFISSGRLKTTLGVDGTGSVYNPDNVSLLAQL 220
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS------LCEAATFFALEMLNIGGDF 179
+ + + G +L L+D + G H+ + L + L +L G+
Sbjct: 221 QAAAKELPGPYNLFLADGGFLLEGSGGERHVEHLQESIVAKLLYSEVVAGLRLLGRSGNM 280
Query: 180 LVKTFQGGT--TNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
++K F T T+ +L LL F+++ VKP SR + E +L+A+G+R
Sbjct: 281 VIKMFGSCTVLTSHLLYLLLTCFRELHIVKPGRSRIVNEEKYLVARGYR 329
>gi|222085093|ref|YP_002543623.1| hemolysin A [Agrobacterium radiobacter K84]
gi|221722541|gb|ACM25697.1| hemolysin A [Agrobacterium radiobacter K84]
Length = 246
Score = 41.7 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 9/149 (6%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
INDP + + +R+A KL+ + ++ + +D+G+S G +++V A
Sbjct: 54 INDP------AQDYVSRAALKLVAALDHFELDPKGQHCLDVGASTGGFTEVLLLR---GA 104
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+ + + M P + L++ + IG ++SD+++ ++
Sbjct: 105 EHVTAIDVGHGQMHPRISADPRVTSMEGLNARNLTAEDIGKPFTFLVSDVSFISLKLAVA 164
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVK 182
L +A G D + K
Sbjct: 165 PALELAEPGSSAALLVKPQFEAGRDAVGK 193
>gi|15837350|ref|NP_298038.1| putative RNA 2'-O-ribose methyltransferase [Xylella fastidiosa
9a5c]
gi|81547995|sp|Q9PFD0|RLMM_XYLFA RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|9105638|gb|AAF83558.1|AE003916_12 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 351
Score = 41.3 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)
Query: 49 ARSAYKLLQI-------NEKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + NE+ L+ R DLG++PG W+ V R + + V+
Sbjct: 184 SRSALKLEEALITLLTSNEREAKLRPGMRATDLGAAPGGWTWVLIRQHLRVTSIDNAVLR 243
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + V+ F + +++ + P V MA + +
Sbjct: 244 PSLLNHPLVQHVRADGFRWTPPRPMDWMVCDMVEQPRRVAERMAVWLREGWCRHMIFNLK 303
Query: 161 LCEAATFFALEMLNIG 176
L + +
Sbjct: 304 LPMKKRWDETRLCLER 319
>gi|319784706|ref|YP_004144182.1| RNA-binding S4 domain protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170594|gb|ADV14132.1| RNA-binding S4 domain protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 254
Score = 41.3 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+G+ +R+A KL+ + + + R +D+G+S G ++QV
Sbjct: 64 AQGYVSRAALKLIGGLDHFGLDPAGREALDIGASTGGFTQVLLER 108
>gi|157827026|ref|YP_001496090.1| hemolysin A [Rickettsia bellii OSU 85-389]
gi|157802330|gb|ABV79053.1| Hemolysin A [Rickettsia bellii OSU 85-389]
Length = 249
Score = 41.3 bits (95), Expect = 0.093, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
D V+ + + +R A KL++ + +I S +DLGSS G +++V
Sbjct: 51 DIKVKLPK-HNYVSRGALKLIKALDHFKINPSGMVCIDLGSSTGGFTEVLLEQ 102
>gi|327401288|ref|YP_004342127.1| RNA-binding S4 domain-containing protein [Archaeoglobus veneficus
SNP6]
gi|327316796|gb|AEA47412.1| RNA-binding S4 domain protein [Archaeoglobus veneficus SNP6]
Length = 218
Score = 41.3 bits (95), Expect = 0.095, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
R R +KL +I+ + +I+ N ++DLGSS G + A+
Sbjct: 55 RPRGYWKLAEIDARWKIIDKNDIVLDLGSSAGGFLLYASERAKK 98
>gi|13476217|ref|NP_107787.1| hemolysin-like protein [Mesorhizobium loti MAFF303099]
gi|14026977|dbj|BAB53573.1| hemolysin-like protein [Mesorhizobium loti MAFF303099]
Length = 254
Score = 41.3 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 4/140 (2%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+G+ +R+A KL+ + + + R +D+G+S G ++QV A++ + +
Sbjct: 64 AQGYVSRAALKLIGGLDHFSLDPAGREALDIGASTGGFTQVLLER---GASHVIAIDVGH 120
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFI-RQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
M P +G L++ + G NPD ++SD+++ ++ L
Sbjct: 121 GQMHPDVGKDPRVTVVEGLNARDLTAADLAGRNPDFIVSDVSFISLRLALPPALALAKPG 180
Query: 163 EAATFFALEMLNIGGDFLVK 182
AA F G + + K
Sbjct: 181 AAAVFLVKPQFEAGREAIGK 200
>gi|227821073|ref|YP_002825043.1| hemolysin-like protein [Sinorhizobium fredii NGR234]
gi|227340072|gb|ACP24290.1| hemolysin-like protein [Sinorhizobium fredii NGR234]
Length = 251
Score = 41.3 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-VAID 102
+ + +R+A KL+ + + + +D+G+S G +++V + ++ V
Sbjct: 62 AQDYVSRAALKLVGALDHFGFDPAGQICLDIGASTGGFTEVLLKRGAAHVVAVDVGHGQM 121
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ GV + + + ++SD+++
Sbjct: 122 HPRIAEDPGVTNIEGLNARAMTAD---DIGNRTITFIVSDVSF 161
>gi|188575397|ref|YP_001912326.1| putative RNA 2'-O-ribose methyltransferase [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|226705379|sp|B2SPV7|RLMM_XANOP RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|188519849|gb|ACD57794.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 347
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEEREALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 242 AHVLETGLVEHLRADGFHWKPAQPVDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + ++ F+ ++ K+ +
Sbjct: 302 LPMKKRWD-------ETRLCLELFEQQAEKSLIVRAKQLY 334
>gi|269114896|ref|YP_003302659.1| Hemolysin A [Mycoplasma hominis]
gi|268322521|emb|CAX37256.1| Hemolysin A [Mycoplasma hominis ATCC 23114]
Length = 244
Score = 41.3 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 45/134 (33%), Gaps = 3/134 (2%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R AYKLL+ EK I +++ +D+GSS G + V R +
Sbjct: 59 YVSRGAYKLLEAIEKFNINLTDKICLDIGSSTGGFVDVMLRHGAKKVYAVDCGTNQLAYE 118
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
I ++ N + V D+++ ++ + + ++
Sbjct: 119 LRINDKVVVYEKTNL---KNLKKEMFLENIEFVSCDVSFISLKYVFEVCNKLLNNNVNVV 175
Query: 167 FFALEMLNIGGDFL 180
F ++
Sbjct: 176 FLIKPQFEASSKYV 189
>gi|20178609|ref|NP_620044.1| polyprotein [Rio Bravo virus]
gi|7144650|gb|AAF37322.1|AF144692_1 polyprotein [Rio Bravo virus]
Length = 3379
Score = 40.9 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
+R KL ++E+ + + +VDLG G WS A T N + +
Sbjct: 2538 VSRGTSKLAWMHER-GFIPLSGHVVDLGCGRGGWSYYCAAQTPVRKVNAYTLGTGAHEKP 2596
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
+ V+ ++ + S + + + D VL D+ + + +T+ + E
Sbjct: 2597 RL--VESLGWNLITFKSKTDVFKLKPYSCDTVLCDIGE-SNPSYATEAKKTLEVIEMVGN 2653
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI---HVKPVASRAESVEMFLL 221
++N +F K + +L L K FQ + ++ SR + EM+ +
Sbjct: 2654 --WMLVNPESNFCFKVL-NPYSPQVLERLTK-FQHMFGGGIIRVPHSRNSTHEMYFV 2706
>gi|312087447|ref|XP_003145475.1| hypothetical protein LOAG_09900 [Loa loa]
gi|307759362|gb|EFO18596.1| hypothetical protein LOAG_09900 [Loa loa]
Length = 584
Score = 40.9 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 148 IGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIH 205
+ L + +L +L GG F+VK + T +L L F++V
Sbjct: 238 KDNPAEQERIIFPLLQKEIDISLSLLQTGGTFIVKMYTSFLNDTITLLSRLLMFFKEVHV 297
Query: 206 VKPVASRAESVE 217
+KP S+ + E
Sbjct: 298 IKPSCSKPGNSE 309
>gi|304404455|ref|ZP_07386116.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus
curdlanolyticus YK9]
gi|304346262|gb|EFM12095.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Paenibacillus
curdlanolyticus YK9]
Length = 349
Score = 40.9 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 57/163 (34%), Gaps = 12/163 (7%)
Query: 43 QLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAI 101
+ +G +R+ +KL++ + R +D+G++PG W+ + R V++
Sbjct: 185 REDGQISRAKFKLVEAERAFGLDYTQYRDALDIGAAPGGWTSLLLE---------RGVSV 235
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM--AYPTIGHRKIDHLRTM 159
+D + L + + DL++ DM + + +D T+
Sbjct: 236 TAIDPAALHPSIVRHPKLTYLKRNASEVKFKPNSFDLLVCDMSWSPMQMVKLVMDLTDTL 295
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK 202
A M + +++ I+ K+ F
Sbjct: 296 CHGATAIVTIKLMHKKPLQTIRDVMAKLSSDFIVHRAKQLFHN 338
>gi|94986770|ref|YP_594703.1| SAM-dependent methyltransferase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731019|emb|CAJ54382.1| predicted SAM-dependent methyltransferase [Lawsonia intracellularis
PHE/MN1-00]
Length = 308
Score = 40.9 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 9/148 (6%)
Query: 49 ARSAYKLLQINEKHQILQSN-RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
+R+ KL ++ + + S +DLG+SPG W+ V A++ ++ + A +
Sbjct: 149 SRAYLKLWEVFTRFSFVPSYKELCIDLGASPGGWTWVLAKL--GSSVISIDKAPLASHIS 206
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
+ V+ + GN D + SDMA ++
Sbjct: 207 SLPNVEHYTGSGF------RFTPLHIGNVDWIFSDMACYPNKLYNFIQPWIINKNCHTII 260
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCL 195
L++ + + F+ ++ ++ L
Sbjct: 261 CTLKLQGKPSNSTLSCFKKIQSSYLIHL 288
>gi|86606840|ref|YP_475603.1| ribosomal RNA large subunit methytransferase J [Synechococcus sp.
JA-3-3Ab]
gi|86555382|gb|ABD00340.1| ribosomal RNA large subunit methytransferase J [Synechococcus sp.
JA-3-3Ab]
Length = 356
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAA 86
++R DP +R+ +KLL+ + ++ LQ R +DLG++PG WS++
Sbjct: 177 VHRFRRDP--------DQISRAEFKLLEAIQVFRVPLQPGGRALDLGAAPGGWSRILR 226
>gi|67459268|ref|YP_246892.1| hemolysin A [Rickettsia felis URRWXCal2]
gi|67004801|gb|AAY61727.1| Hemolysin A [Rickettsia felis URRWXCal2]
Length = 254
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 28/208 (13%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D V+ Q + +R A KL+ + +I N +D+GSS G +++V
Sbjct: 51 DIKVKLPQ-HNYVSRGALKLIAALDYFKIDPENLVCIDIGSSTGGFTEVLLERKAKLIFA 109
Query: 96 TRV-VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKID 154
V + +K + + + I D+ +
Sbjct: 110 VDVGYGELHPKLRDNPQIKVLEKTNARYLTDKQITTKP---------DLIVCDASFISLT 160
Query: 155 HLRTMSLCEAATFFALEMLNIGGDFLVK--TFQGGTT------NDILCLLKKHFQKVIHV 206
+ L A L L + K QGG + +K F+K +
Sbjct: 161 TILPTPLNLAKEDCMLIALIKPQFEVEKHEVEQGGIIKNPLLHQKVCDKIKDWFEKEHNF 220
Query: 207 K-------PVASRAESVEMFLLAKGFRK 227
K P+ + E FL+ G RK
Sbjct: 221 KIFGIIESPILGAKGNKE-FLIC-GKRK 246
>gi|67993605|ref|NP_001018225.1| SAM-dependent methyltransferase [Schizosaccharomyces pombe 972h-]
gi|74622209|sp|Q8TFH4|YIKA_SCHPO RecName: Full=Putative ribosomal RNA methyltransferase PB17E12.10c;
AltName: Full=rRNA (uridine-2'-O-)-methyltransferase
gi|19571753|emb|CAD27503.1| SAM-dependent methyltransferase [Schizosaccharomyces pombe]
Length = 301
Score = 40.9 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 38/214 (17%), Positives = 69/214 (32%), Gaps = 64/214 (29%)
Query: 54 KLLQ-INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGV 112
K ++ IN++HQ+ + + +VDLG +PG WS +AAR G RV+A DI+
Sbjct: 61 KFIEKINKEHQLFKPGQIVVDLGCAPGIWSTIAARHVGL---FGRVIACDIIPCRLPENS 117
Query: 113 KFFKFDFLDLDSW---------------------------------------EFIRQAIG 133
+ + L ++ + +
Sbjct: 118 SMIQGNILSMEIQLEIAKAAIRSRNSFFRNQQDHNSASIPYLQSVFEEERDTKEKAKIED 177
Query: 134 GNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF---------------------FALEM 172
+ D+++SD+ P + + + A FA++
Sbjct: 178 LSADVIMSDLGPPFPMVQGFEFWISKLPYLAMQTNEHLAVKDELDSLYLAQAALLFAIKA 237
Query: 173 LNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
L G FL K + L F+ V +
Sbjct: 238 LKPDGIFLCKVLESSHLRSFAEDLSMCFKCVKKI 271
>gi|325916858|ref|ZP_08179106.1| putative SAM-dependent methyltransferase [Xanthomonas vesicatoria
ATCC 35937]
gi|325536903|gb|EGD08651.1| putative SAM-dependent methyltransferase [Xanthomonas vesicatoria
ATCC 35937]
Length = 347
Score = 40.5 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 55/160 (34%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ ++++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLAPEERERLVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+LD + ++ F + +++ + P V MA + +
Sbjct: 242 EHVLDTGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRHTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + F+ + K+ +
Sbjct: 302 LPMKKRWDETRLCLD-------LFEQQAEKSLTVRAKQLY 334
>gi|118397756|ref|XP_001031209.1| hypothetical protein TTHERM_00895590 [Tetrahymena thermophila]
gi|89285534|gb|EAR83546.1| hypothetical protein TTHERM_00895590 [Tetrahymena thermophila
SB210]
Length = 601
Score = 40.5 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 33/111 (29%), Gaps = 2/111 (1%)
Query: 118 DFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGG 177
L + DL L + P + + +L
Sbjct: 257 YINTLKEQAQEQDFSFEGFDLYLGLRSCPNVEGYLQQEKQCQKRMIFDLTMICNLLADQQ 316
Query: 178 DFLVKTFQGGTTNDI--LCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
+ ++K + + + L L K FQ V+ KP S S +L F+
Sbjct: 317 NCVIKFYHTFSIRTLMILYLFSKIFQTVVMSKPRTSSFASNARYLHCTNFK 367
>gi|218282381|ref|ZP_03488663.1| hypothetical protein EUBIFOR_01245 [Eubacterium biforme DSM 3989]
gi|218216667|gb|EEC90205.1| hypothetical protein EUBIFOR_01245 [Eubacterium biforme DSM 3989]
Length = 243
Score = 40.5 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 75/204 (36%), Gaps = 25/204 (12%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
H D +V +R A+KL +K+ + SN+ ++D+G+S G ++ V R G+
Sbjct: 53 HTQDEFV---------SRGAFKLKGCLDKYNVDISNQVVLDIGASTGGFTDVCLRY-GAK 102
Query: 93 ANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRK 152
V L E + K + ++ E + D + D+++ +
Sbjct: 103 KVYALDVGHLQLAKELDQDCRVVKMEG--HNAREIVPDWFDEPIDFMCMDVSFISCKTIL 160
Query: 153 IDHLRTMSLCEA------ATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
L +S+ LN G + D+ L ++++ V +
Sbjct: 161 KHVLHVLSISHIAILVKPQFECGPAALNKHGVLINSKLALQIVEDVKAFLFQYYKSVEAM 220
Query: 207 KPVAS----RAESVEMFLLAKGFR 226
P S R+ + E + AK R
Sbjct: 221 -P--SILEGRSGNQEYMVYAKDLR 241
>gi|237900829|gb|ACR33194.1| viral polymerase [Sudan ebolavirus]
Length = 2210
Score = 40.5 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 58/198 (29%), Gaps = 26/198 (13%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI-- 103
G + YKL ++ ++ V L GS + + + G +A +
Sbjct: 1805 GIVSSMHYKLDEVLWEYNKF---ESAVTLAEGEGSGALLLIQKYGVKKLFLNTLATEHSI 1861
Query: 104 -----------------LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
+ ++ + + R + + +D+
Sbjct: 1862 ESEVISGYTTPRMLLSVMPRTHRGELEVILNNSASQITDITHRDWFSNQKNRIPNDVDII 1921
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGG--DFLVKTFQGGTTND--ILCLLKKHFQK 202
T+ ++L L EA +N ++K F I L F
Sbjct: 1922 TMDAETTENLDRSRLYEAVYTIICNHINPKTLKVVILKVFLSDLDGMCWINNYLAPMFGS 1981
Query: 203 VIHVKPVASRAESVEMFL 220
+KP+ S A S E +L
Sbjct: 1982 GYLIKPITSSARSSEWYL 1999
>gi|165940962|gb|ABY75328.1| viral polymerase [Sudan ebolavirus]
Length = 2210
Score = 40.5 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 58/198 (29%), Gaps = 26/198 (13%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI-- 103
G + YKL ++ ++ V L GS + + + G +A +
Sbjct: 1805 GIVSSMHYKLDEVLWEYNKF---ESAVTLAEGEGSGALLLIQKYGVKKLFLNTLATEHSI 1861
Query: 104 -----------------LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
+ ++ + + R + + +D+
Sbjct: 1862 ESEVISGYTTPRMLLSVMPRTHRGELEVILNNSASQITDITHRDWFSNQKNRIPNDVDII 1921
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGG--DFLVKTFQGGTTND--ILCLLKKHFQK 202
T+ ++L L EA +N ++K F I L F
Sbjct: 1922 TMDAETTENLDRSRLYEAVYTIICNHINPKTLKVVILKVFLSDLDGMCWINNYLAPMFGS 1981
Query: 203 VIHVKPVASRAESVEMFL 220
+KP+ S A S E +L
Sbjct: 1982 GYLIKPITSSARSSEWYL 1999
>gi|8477362|sp|Q66802|L_EBOSM RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|1041214|gb|AAA79970.1| RNA-dependent RNA polymerase [Sudan ebolavirus]
Length = 2210
Score = 40.5 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 58/198 (29%), Gaps = 26/198 (13%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI-- 103
G + YKL ++ ++ V L GS + + + G +A +
Sbjct: 1805 GIVSSMHYKLDEVLWEYNKF---ESAVTLAEGEGSGALLLIQKYGVKKLFLNTLATEHSI 1861
Query: 104 -----------------LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
+ ++ + + R + + +D+
Sbjct: 1862 ESEVISGYTTPRMLLSVMPRTHRGELEVILNNSASQITDITHRDWFSNQKNRIPNDVDII 1921
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGG--DFLVKTFQGGTTND--ILCLLKKHFQK 202
T+ ++L L EA +N ++K F I L F
Sbjct: 1922 TMDAETTENLDRSRLYEAVYTIICNHINPKTLKVVILKVFLSDLDGMCWINNYLAPMFGS 1981
Query: 203 VIHVKPVASRAESVEMFL 220
+KP+ S A S E +L
Sbjct: 1982 GYLIKPITSSARSSEWYL 1999
>gi|325292121|ref|YP_004277985.1| hemolysin [Agrobacterium sp. H13-3]
gi|325059974|gb|ADY63665.1| hemolysin [Agrobacterium sp. H13-3]
Length = 250
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 9/93 (9%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI---------TGSNAN 94
+ + +R+A KL + + +D+G+S G +++V G
Sbjct: 61 AQAYVSRAALKLTAALDHFGLDPKGHECLDVGASTGGFTEVLLHRGAKHVTSIDVGHGQM 120
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDLDSWEF 127
+ R+ + L +F D +D S +F
Sbjct: 121 HPRIENDSRVTNLEGLNARFLTTDDIDDRSVDF 153
>gi|325920350|ref|ZP_08182286.1| putative SAM-dependent methyltransferase [Xanthomonas gardneri ATCC
19865]
gi|325549170|gb|EGD20088.1| putative SAM-dependent methyltransferase [Xanthomonas gardneri ATCC
19865]
Length = 347
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEEREALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 242 EHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWIREGWCRNTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + F+ + ++ K+ +
Sbjct: 302 LPMKKRWDETRLCLD-------LFEQQSEKSLIVRAKQLY 334
>gi|289663534|ref|ZP_06485115.1| putative RNA 2'-O-ribose methyltransferase [Xanthomonas campestris
pv. vasculorum NCPPB702]
gi|289670924|ref|ZP_06491999.1| putative RNA 2'-O-ribose methyltransferase [Xanthomonas campestris
pv. musacearum NCPPB4381]
Length = 347
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 56/160 (35%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEEREALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 242 EHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + F+ ++ K+ +
Sbjct: 302 LPMKKRWDETRLCLD-------LFEQQAEKSLIVRAKQLY 334
>gi|163867875|ref|YP_001609079.1| hemolysin-like protein [Bartonella tribocorum CIP 105476]
gi|161017526|emb|CAK01084.1| hemolysin-like protein [Bartonella tribocorum CIP 105476]
Length = 247
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R+A KL+ + I+ +D+G+S G ++QV ++ V
Sbjct: 58 AQNYVSRAALKLITALDAFPIVTDKVTAIDVGASTGGFTQVLLERGAAHVIAVDVGHHQF 117
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
D + G DL++SD+++
Sbjct: 118 DKRLLGSCAITLLEGLNVRDFQQEH--LGGREIDLIVSDVSF 157
>gi|25121731|ref|NP_740267.1| non-structural protein 5 [Modoc virus]
Length = 898
Score = 40.5 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 9/176 (5%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
+R KL I+E+ + +VDLG G WS AA + N + + E
Sbjct: 56 VSRGTAKLAWIDERGGVELKG-SVVDLGCGRGGWSYYAA--SQPNVREVKAYTLGTSGHE 112
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
V+ F ++ + S +R+ D VL D+ + +L
Sbjct: 113 KPRLVETFGWNLITFKSKVDVRKMEPFQADTVLCDIGESNPTAAVE---ASRTLTVLNVI 169
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLK--KHFQKVIHVKPVASRAESVEMFLL 221
N G F VK + + + L+K + F + P+ SR + EM+ +
Sbjct: 170 SRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQRRFGGGLIRVPL-SRNSTHEMYFV 224
>gi|209548167|ref|YP_002280084.1| hemolysin A [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209533923|gb|ACI53858.1| hemolysin A [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 248
Score = 40.1 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R+A KL E ++ + +D+G+S G +++V + A + + +
Sbjct: 60 AQDYVSRAALKLASALEHFRLDPAGHHCLDIGASTGGFTEVLLQR---GAAHVTAIDVGH 116
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
M P + + L++ + IG D ++SD+++
Sbjct: 117 GQMHPRIAADPRVTNKEGLNARHLTAEDIGEPADFIVSDVSF 158
>gi|300114178|ref|YP_003760753.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosococcus watsonii
C-113]
gi|299540115|gb|ADJ28432.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Nitrosococcus watsonii
C-113]
Length = 354
Score = 40.1 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 8/121 (6%)
Query: 49 ARSAYKLLQINEKH-------QILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+R+ KL + + + LQ R VDLG++PG WS R A + +A
Sbjct: 186 SRATLKLEEAWQVFLTPEQRRKWLQPGMRAVDLGAAPGGWSWQLVRRGIRVIAVDNGAIA 245
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + F + +++ I P V A + +
Sbjct: 246 PSLLESGLVDHQPMDAFHYTPRHFADWMVCDIVEKPRRVAQLAAQWLANGWCRQCIFNLK 305
Query: 161 L 161
L
Sbjct: 306 L 306
>gi|49475233|ref|YP_033274.1| hemolysin-like protein [Bartonella henselae str. Houston-1]
gi|49238038|emb|CAF27245.1| Hemolysin-like protein [Bartonella henselae str. Houston-1]
Length = 249
Score = 40.1 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 2/139 (1%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R+A KL+ + I+ +D+G+S G ++QV G+ V +
Sbjct: 58 AQNYVSRAALKLMGALDAFPIVTDKVTAIDIGASTGGFTQVLLER-GAEHVIAVDVGHNQ 116
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCE 163
LD + L++ + G DL++SD+++ ++ L
Sbjct: 117 LDARLFGNSAITLLEGLNVRDLKQ-EHLGGREIDLIVSDVSFISLKLALPPVLSLAKQGA 175
Query: 164 AATFFALEMLNIGGDFLVK 182
A IG +FL K
Sbjct: 176 QAVLLVKPQFEIGREFLSK 194
>gi|15828642|ref|NP_326002.1| hemolysin A [Mycoplasma pulmonis UAB CTIP]
gi|14089584|emb|CAC13344.1| HEMOLYSIN A [Mycoplasma pulmonis]
Length = 238
Score = 40.1 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 56/138 (40%), Gaps = 7/138 (5%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R AYKLLQ E ++ ++ ++D+GSS G +SQVA I G+ + LD
Sbjct: 54 YVSRGAYKLLQAIEDFKLDFKDKIVLDIGSSTGGFSQVAL-INGAKKVYALDSGTNQLDY 112
Query: 107 --EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
+ V ++ L + + + D+ + D+++ ++ + ++
Sbjct: 113 KLRILDNVVVYENTNLKNINPKMFEE----QLDICVCDVSFISLKEVFKVLQSVLKKNKS 168
Query: 165 ATFFALEMLNIGGDFLVK 182
+ + K
Sbjct: 169 LMALIKPQFEAPKNLVEK 186
>gi|91205423|ref|YP_537778.1| hemolysin A [Rickettsia bellii RML369-C]
gi|91068967|gb|ABE04689.1| Hemolysin A [Rickettsia bellii RML369-C]
Length = 249
Score = 40.1 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
D V+ + + +R A KL++ + +I S +D GSS G +++V
Sbjct: 51 DIKVKLPK-HNYVSRGALKLIKALDHFKINPSGMVCIDFGSSTGGFTEVLLEQ 102
>gi|224373114|ref|YP_002607486.1| hemolysin A [Nautilia profundicola AmH]
gi|223589777|gb|ACM93513.1| hemolysin A [Nautilia profundicola AmH]
Length = 236
Score = 40.1 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
Q +G+ +R+AYKL +KH I N+ ++D+GSS G ++QVA
Sbjct: 52 QNDGYVSRAAYKLKNYLQKHGINFENKTVLDIGSSTGGFTQVALE 96
>gi|220966639|gb|ACL97360.1| L protein [Nariva virus]
Length = 2201
Score = 40.1 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 68/227 (29%), Gaps = 31/227 (13%)
Query: 30 LNRHINDPYVQRAQLEGWRARSAYKLLQINEKH--QILQSNRRIVDLGSSPGSWSQVAAR 87
L+R D + G + S YK L+I + Q+ +R + LG G+
Sbjct: 1750 LSRQAVDYSHHLYRRLGINSTSCYKALEIANVIAGRFDQTGQR-LFLGEGSGAMLVTYYY 1808
Query: 88 ITGSNANNTRVVAIDILDMEPILG---------------VKFFKFDFLDLDSWEFIRQAI 132
+ G+ V+ D +++
Sbjct: 1809 MLGNTKCYYNTGVFTDSVRGQREFNPYPSEVALVGKQNSVQNLLNDQIEILFNGKPESTW 1868
Query: 133 GG---NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML--------NIGGDFLV 181
G +L+ + T D T L + G ++
Sbjct: 1869 IGNLECYAYILNQVKIGTCSMVHCDMEGTSEKTRLQVLEELCHVVSIAVATGAPGSVLVL 1928
Query: 182 KTFQGGTT--NDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
K G ++++ + + +++V P S +S EM+++A +
Sbjct: 1929 KLMPLGDDWMSELIKFICEQYEEVFLHIPWYSNPDSTEMYVIAINLK 1975
>gi|21230290|ref|NP_636207.1| putative RNA 2'-O-ribose methyltransferase [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66769716|ref|YP_244478.1| putative RNA 2'-O-ribose methyltransferase [Xanthomonas campestris
pv. campestris str. 8004]
gi|188992932|ref|YP_001904942.1| putative RNA 2'-O-ribose methyltransferase [Xanthomonas campestris
pv. campestris str. B100]
gi|81304330|sp|Q4UR65|RLMM_XANC8 RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|81796273|sp|Q8PCB8|RLMM_XANCP RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|226705378|sp|B0RUG0|RLMM_XANCB RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|21111838|gb|AAM40131.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575048|gb|AAY50458.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167734692|emb|CAP52902.1| Conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 347
Score = 39.7 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ Q+++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEEREQLVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L + ++ F + +++ + P V MA + +
Sbjct: 242 EHVLATGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRHTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + F+ + K+ +
Sbjct: 302 LPMKKRWDETRLCLD-------LFEQQAEKSLTVRAKQLY 334
>gi|222822801|gb|ACM68470.1| polyprotein [Nounane virus]
Length = 3442
Score = 39.7 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 66/185 (35%), Gaps = 14/185 (7%)
Query: 46 GW-RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDIL 104
GW +R KL I E+ L+ + +VDLG G WS + A + +
Sbjct: 2589 GWSVSRGTAKLNWILER-SYLRPHGHVVDLGCGRGGWSYLVAG--ERKVRSVQAYTKGGF 2645
Query: 105 DMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
E VK + ++ ++ S + D ++ D+ + + +L
Sbjct: 2646 GHEEPKMVKNYGWNLINFKSNTNVMWLETKPCDTLMCDIGESSSDPHIEEE---RTLKVV 2702
Query: 165 ATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI---HVKPVASRAESVEMFLL 221
F F+ K I+ L K QK+ V+ SR + EM+ +
Sbjct: 2703 EMFERWLKEQRPDQFVCKIL-CPYGPRIMEKLDKC-QKIYGGGLVRVPFSRNSTHEMYWV 2760
Query: 222 --AKG 224
AKG
Sbjct: 2761 SEAKG 2765
>gi|327188063|gb|EGE55290.1| hemolysin A [Rhizobium etli CNPAF512]
Length = 261
Score = 39.7 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R+A KL E ++ + +D+G+S G +++V + A + + +
Sbjct: 73 AQDYVSRAALKLASALEHFRLDPAGHHCLDIGASTGGFTEVLLQR---GAAHVTAIDVGH 129
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
M P + + L++ + + IG ++SD+++
Sbjct: 130 GQMHPRISGDPRVTNREALNARDLTAEDIGRPASFIVSDVSF 171
>gi|294664497|ref|ZP_06729845.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292605730|gb|EFF49033.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 347
Score = 39.7 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 55/160 (34%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEERDALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 242 EHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + F+ + K+ +
Sbjct: 302 LPMKKRWDETRLCLD-------LFEQQAEKSLSVRAKQLY 334
>gi|294625777|ref|ZP_06704396.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292599947|gb|EFF44065.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 344
Score = 39.7 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 55/160 (34%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 179 SRSALKLDEALLTLLTPEERDALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 238
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 239 EHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 298
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + F+ + K+ +
Sbjct: 299 LPMKKRWDETRLCLD-------LFEQQAEKSLSVRAKQLY 331
>gi|166710749|ref|ZP_02241956.1| putative RNA 2'-O-ribose methyltransferase [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 347
Score = 39.7 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 56/160 (35%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ ++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEEREALVTPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 242 AHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + ++ F+ ++ K+ +
Sbjct: 302 LPMKKRWD-------ETRLCLELFEQQAEKSLIVRAKQLY 334
>gi|154251238|ref|YP_001412062.1| hemolysin A [Parvibaculum lavamentivorans DS-1]
gi|154155188|gb|ABS62405.1| hemolysin A [Parvibaculum lavamentivorans DS-1]
Length = 247
Score = 39.7 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 41 RAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
A + +R A KL+ + I S +DLG+S G +++V G + V
Sbjct: 56 LAPEHPYVSRGALKLVHALDHFGIDPSGSLCLDLGASTGGFTEVLLER-GVASVVAIDVG 114
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
L + + L++ + R + G DL+++D+++
Sbjct: 115 HGQLAEKIAQDTRV--RAIEGLNAKDISRDIVPGRIDLIVADLSF 157
>gi|47230360|emb|CAF99553.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 39.7 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 204 IHVKPVASRAESVEMFLLAKGF 225
KP S+A + E++++ +
Sbjct: 199 NVFKPATSKAGNSEVYVVCLSY 220
>gi|26553603|ref|NP_757537.1| hemolysin [Mycoplasma penetrans HF-2]
gi|26453609|dbj|BAC43941.1| hemolysin [Mycoplasma penetrans HF-2]
Length = 246
Score = 39.7 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
E + +R+AYKL E I +N+ +D+GSS G ++QV + V +
Sbjct: 56 EEKYVSRAAYKLKAAIEHFNIDLNNKIAIDIGSSTGGFTQVLLE-NNVKKVYSIDVGTNQ 114
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
L+ + K + E I D + D+++
Sbjct: 115 LNEQLKKNNKVI--SLEQTNFREIESSLIKDKIDFITIDVSF 154
>gi|260460313|ref|ZP_05808565.1| hemolysin A [Mesorhizobium opportunistum WSM2075]
gi|259033958|gb|EEW35217.1| hemolysin A [Mesorhizobium opportunistum WSM2075]
Length = 254
Score = 39.4 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+G+ +R+A KLL + + + +D+G+S G ++QV
Sbjct: 64 AQGYVSRAALKLLGGLDHFGLDPAGSEALDVGASTGGFTQVLLER 108
>gi|307720806|ref|YP_003891946.1| hemolysin A [Sulfurimonas autotrophica DSM 16294]
gi|306978899|gb|ADN08934.1| hemolysin A [Sulfurimonas autotrophica DSM 16294]
Length = 235
Score = 39.4 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 16/108 (14%), Positives = 39/108 (36%), Gaps = 2/108 (1%)
Query: 33 HINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSN 92
+D V+ + + +R+A+KL + + + + +D+GSS G ++QV
Sbjct: 43 QQSDE-VRVLEHRSYVSRAAFKLDEFLNETGLHVKGKTALDIGSSTGGFTQVLLERGAGK 101
Query: 93 ANNTRVVAIDILDMEPIL-GVKFFKFDFLDLDSWEFIRQAIGGNPDLV 139
+ V + V ++ + + I + +
Sbjct: 102 VSCVDVGREQLHHSLRKDERVHVYENCDIRKFEPDKQFDLIVSDVAFI 149
>gi|51473737|ref|YP_067494.1| hemolysin [Rickettsia typhi str. Wilmington]
gi|51460049|gb|AAU04012.1| hemolysin [Rickettsia typhi str. Wilmington]
Length = 251
Score = 39.4 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 16 KVKNRSCQ-GSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
KV N+ Q S +N H D V+ Q + +R A KL+ + +I +N +D+
Sbjct: 30 KVHNKHEQLIKSGMKVNIHDQDIKVKLPQ-HNYVSRGALKLITALDYFKIEPTNLVCIDI 88
Query: 75 GSSPGSWSQVAARI 88
GSS G +++V
Sbjct: 89 GSSTGGFTEVLFER 102
>gi|224981309|gb|ACN73462.1| polyprotein [Nounane virus]
Length = 3442
Score = 39.4 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 66/185 (35%), Gaps = 14/185 (7%)
Query: 46 GW-RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDIL 104
GW +R KL I E+ L+ + +VDLG G WS + A + +
Sbjct: 2589 GWSVSRGTAKLNWILER-SYLRPHGHVVDLGCGRGGWSYLVAG--ERKVRSVQAYTKGGF 2645
Query: 105 DMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
E VK + ++ ++ S + D ++ D+ + + +L
Sbjct: 2646 GHEEPKMVKNYGWNLINFKSNTNVMWLETKPCDTLMCDIGESSSDPYIEEE---RTLKVV 2702
Query: 165 ATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI---HVKPVASRAESVEMFLL 221
F F+ K I+ L K QK+ V+ SR + EM+ +
Sbjct: 2703 EMFERWLKEQRPDQFVCKIL-CPYGPRIMEKLDKC-QKIYGGGLVRVPFSRNSTHEMYWV 2760
Query: 222 --AKG 224
AKG
Sbjct: 2761 SEAKG 2765
>gi|220905563|ref|YP_002480875.1| hemolysin A [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219869862|gb|ACL50197.1| hemolysin A [Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 316
Score = 39.4 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D Q E + +R AYKLL I ++ ++ + +D G+S G ++ + G+
Sbjct: 105 DTAFALLQPEPYVSRGAYKLLTILDQFKLDVTGLVCLDAGASTGGFTDCLLQR-GAARVY 163
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
V + L + + + ++L E I D+V++D+++
Sbjct: 164 AVDVGRNQLHEKLRTNARVINLEGVNLRHAEAG--LIPEPVDMVVADVSF 211
>gi|183982514|ref|YP_001850805.1| cytotoxin/hemolysin, TlyA [Mycobacterium marinum M]
gi|183175840|gb|ACC40950.1| cytotoxin/hemolysin, TlyA [Mycobacterium marinum M]
Length = 281
Score = 39.4 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-VAID 102
GW +R A+KL+ + I RR +D G+S G ++ V + V
Sbjct: 59 ERGWVSRGAHKLIGALDAFGIDVHGRRCLDAGASTGGFTDVLLDRGAAEVVAADVGYGQL 118
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ V + + AIGG DLV++D+++
Sbjct: 119 AWSLRTDPRVIVI----ERTNVRDLSPAAIGGQVDLVVADLSF 157
>gi|254821088|ref|ZP_05226089.1| TlyA [Mycobacterium intracellulare ATCC 13950]
Length = 269
Score = 39.4 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
GW +R A+KL+ + I + RR +D G+S G +++V G+ V
Sbjct: 59 ERGWVSRGAHKLIGALDAFGISVAGRRCLDAGASTGGFTEVLLDR-GAAEVVAVDVGYGQ 117
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
L + + + +AIGG DLV++D+++
Sbjct: 118 LAWSLRSDARVVV--VERTNVRDLTPEAIGGPADLVVADLSF 157
>gi|254500931|ref|ZP_05113082.1| hemolysin A [Labrenzia alexandrii DFL-11]
gi|222437002|gb|EEE43681.1| hemolysin A [Labrenzia alexandrii DFL-11]
Length = 246
Score = 39.4 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD 105
G+ +R+A KL++ + ++ +D+G+S G ++QV + G+ + V D L
Sbjct: 59 GYVSRAALKLIEGLRTFNVTPVDKICLDIGASTGGFTQVLLQ-NGATRVHAIDVGHDQLH 117
Query: 106 ME 107
+
Sbjct: 118 DK 119
>gi|55770815|ref|YP_138527.1| polymerase [Sudan ebolavirus]
gi|81933484|sp|Q5XX01|L_EBOSU RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|52352977|gb|AAU43890.1| polymerase [Sudan ebolavirus]
Length = 2210
Score = 39.4 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 58/198 (29%), Gaps = 26/198 (13%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI-- 103
G + YKL ++ ++ V L GS + + + G +A +
Sbjct: 1805 GIVSSMHYKLDEVLWEYNKF---ESAVTLAEGEGSGALLLIQKYGVKKLFLNTLATEHSI 1861
Query: 104 -----------------LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
+ ++ + + R + + +D
Sbjct: 1862 ESEVISGYTTPRMLLPIMPKTHRGELEVILNNSASQITDITHRDWFSNQKNRIPNDADII 1921
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGG--DFLVKTFQGGTTND--ILCLLKKHFQK 202
T+ ++L L EA +N ++K F I L F
Sbjct: 1922 TMDAETTENLDRSRLYEAVYTIICNHINPKTLKVVILKVFLSDLDGMCWINNYLAPMFGS 1981
Query: 203 VIHVKPVASRAESVEMFL 220
+KP+ S A+S E +L
Sbjct: 1982 GYLIKPITSSAKSSEWYL 1999
>gi|118617311|ref|YP_905643.1| cytotoxin/hemolysin, TlyA [Mycobacterium ulcerans Agy99]
gi|7340781|emb|CAB83047.1| putative haemolysin [Mycobacterium ulcerans]
gi|118569421|gb|ABL04172.1| cytotoxin/hemolysin, TlyA [Mycobacterium ulcerans Agy99]
Length = 281
Score = 39.4 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-VAID 102
GW +R A+KL+ + I RR +D G+S G +++V + V
Sbjct: 59 ERGWVSRGAHKLIGALDAFGIDVHGRRCLDAGASTGGFTEVLLDRGAAEVVAADVGYGQL 118
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ V + + AIGG DLV++D+++
Sbjct: 119 AWSLRTDPRVIVI----ERTNVRDLSPAAIGGQVDLVVADLSF 157
>gi|269792512|ref|YP_003317416.1| hemolysin A [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100147|gb|ACZ19134.1| hemolysin A [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 269
Score = 39.4 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
VQR E W +R AYKLL+ E Q+ R VD+G+S G ++QV R +RV
Sbjct: 51 VQRGTEERWVSRGAYKLLRALEVFQLDPFGRICVDVGASTGGFTQVLLRR-----GASRV 105
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIR--QAIGGNPDLVLSDMAY 145
++D+ + V+ + + I + + D ++
Sbjct: 106 YSVDVGYGQMAWEVRNDPRVVVMERTNARHLSPSLIPEPCQMGVCDASF 154
>gi|302878038|ref|YP_003846602.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gallionella
capsiferriformans ES-2]
gi|302580827|gb|ADL54838.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Gallionella
capsiferriformans ES-2]
Length = 488
Score = 39.4 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 13/168 (7%)
Query: 49 ARSAYKLLQINEKH-------QILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RS KL + + ++L+S VDLG++PG W+ + A + +
Sbjct: 317 SRSTLKLAEAIDVFMDKGEQSRLLRSGMTAVDLGAAPGGWTWQMVKRGMRVTAVDNGPMK 376
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+ + + F F + +++ + P V + + + +
Sbjct: 377 GVLAKNPAVEHLMQDGFKFTPRKAVDWLICDMVEKPAKVAELIGNWFVSGWCKHAIFNLK 436
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQ--GGTTNDILCLLKKHFQKVIHV 206
L A + G + K G + I L +++
Sbjct: 437 LPMKQRVTATDAALGG---IRKLLDMEGISYKLIAKQLYHDREEITVF 481
>gi|218671119|ref|ZP_03520790.1| hemolysin A [Rhizobium etli GR56]
Length = 172
Score = 39.4 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 24/45 (53%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+ + +R+A KL E ++ + +D+G+S G +++V +
Sbjct: 73 AQDYVSRAALKLASALEHFRLDPAGHHCLDIGASTGGFTEVLLQR 117
>gi|218462484|ref|ZP_03502575.1| hemolysin A [Rhizobium etli Kim 5]
Length = 261
Score = 39.4 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 53/139 (38%), Gaps = 3/139 (2%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R+A KL + ++ + +D+G+S G +++V + A + + +
Sbjct: 73 AQDYVSRAALKLASALDHFRLDPAGHHCLDIGASTGGFTEVLLQR---GAAHVTAIDVGH 129
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCE 163
M P + + L++ + IG ++SD+++ ++ L
Sbjct: 130 GQMHPRISGDPRVTNREGLNARNLTAEDIGHPASFIVSDVSFISLKLALAPALDIAEPGA 189
Query: 164 AATFFALEMLNIGGDFLVK 182
A G + + K
Sbjct: 190 IAVLLIKPQFEAGREAIGK 208
>gi|71893515|ref|YP_278961.1| haemolysin [Mycoplasma hyopneumoniae J]
gi|71851642|gb|AAZ44250.1| haemolysin [Mycoplasma hyopneumoniae J]
gi|312601102|gb|ADQ90357.1| Hemolysin [Mycoplasma hyopneumoniae 168]
Length = 237
Score = 39.4 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 59/169 (34%), Gaps = 9/169 (5%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R A KL + ++ ++ I+D+G+S G ++Q G+ +
Sbjct: 49 KQKYVSRGALKLQAAYDYFKLNFQDKIILDIGASKGGFTQFCLEK-GAKKVYALDSGTNQ 107
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCE 163
LD + K + ++ + DL++ D+++ ++ + ++ +
Sbjct: 108 LDYSLRINPKVCVKEKTNIKFVDK--SFFNDEIDLIVCDVSFISLKKVLVVVKNLLTQGK 165
Query: 164 AATFFALEMLNIGGDFLV------KTFQGGTTNDILCLLKKHFQKVIHV 206
++ K + N I+ K F+ +
Sbjct: 166 NCITLLKPQFEANSKYVQKGGIVPKLYHKFLINRIIEFAKPSFEFLNFF 214
>gi|12034946|gb|AAG46052.1|AF326115_1 TlyA haemolysin [Mycoplasma hyopneumoniae]
Length = 232
Score = 39.4 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 59/169 (34%), Gaps = 9/169 (5%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R A KL + ++ ++ I+D+G+S G ++Q G+ +
Sbjct: 49 KQKYVSRGALKLQAAYDYFKLNFQDKIILDIGASKGGFTQFCLEK-GAKKVYALDSGTNQ 107
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCE 163
LD + K + ++ + DL++ D+++ ++ + ++ +
Sbjct: 108 LDYSLRINPKVCVKEKTNIKFVDK--SFFNDEIDLIVCDVSFISLKKVLVVVKNLLTQGK 165
Query: 164 AATFFALEMLNIGGDFLV------KTFQGGTTNDILCLLKKHFQKVIHV 206
++ K + N I+ K F+ +
Sbjct: 166 NCITLLKPQFEANSKYVQKGGIVPKLYHKFLINRIIEFAKPSFEFLNFF 214
>gi|255311732|pdb|2WA1|A Chain A, Structure Of The Methyltransferase Domain From Modoc
Virus, A Flavivirus With No Known Vector (Nkv)
gi|255311733|pdb|2WA1|B Chain B, Structure Of The Methyltransferase Domain From Modoc
Virus, A Flavivirus With No Known Vector (Nkv)
gi|255311734|pdb|2WA2|A Chain A, Structure Of The Methyltransferase Domain From Modoc
Virus, A Flavivirus With No Known Vector (Nkv)
gi|255311735|pdb|2WA2|B Chain B, Structure Of The Methyltransferase Domain From Modoc
Virus, A Flavivirus With No Known Vector (Nkv)
Length = 276
Score = 39.4 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 64/176 (36%), Gaps = 9/176 (5%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
+R KL I+E+ + +VDLG GSWS AA + N + + E
Sbjct: 64 VSRGTAKLAWIDERGGVELKG-TVVDLGCGRGSWSYYAA--SQPNVREVKAYTLGTSGHE 120
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
V+ F ++ + S + + D VL D+ + +L
Sbjct: 121 KPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDIGESNPTAAVE---ASRTLTVLNVI 177
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLKK--HFQKVIHVKPVASRAESVEMFLL 221
N G F VK + + + L+K F + P+ SR + EM+ +
Sbjct: 178 SRWLEYNQGCGFCVKVLNPYSCDVLEALMKMQARFGGGLIRVPL-SRNSTHEMYFV 232
>gi|157964686|ref|YP_001499510.1| hemolysin A [Rickettsia massiliae MTU5]
gi|157844462|gb|ABV84963.1| Hemolysin A [Rickettsia massiliae MTU5]
Length = 257
Score = 39.4 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
D V+R + + +R A KL+ + +I N +D+GSS G +++V
Sbjct: 57 DIKVKRPK-HNYVSRGALKLIAALDYFKIDPENLVCIDIGSSTGGFTEVLLER 108
>gi|27735371|ref|NP_776080.1| non-structural protein NS5; RNA-dependent RNA polymerase;
methyltransferase component of capping enzyme [Rio Bravo
virus]
Length = 897
Score = 39.0 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 11/177 (6%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
+R KL ++E+ + + +VDLG G WS A T N + +
Sbjct: 56 VSRGTSKLAWMHER-GFIPLSGHVVDLGCGRGGWSYYCAAQTPVRKVNAYTLGTGAHEKP 114
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
+ V+ ++ + S + + + D VL D+ + + +T+ + E
Sbjct: 115 RL--VESLGWNLITFKSKTDVFKLKPYSCDTVLCDIGE-SNPSYATEAKKTLEVIEMVGN 171
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVI---HVKPVASRAESVEMFLL 221
++N +F K + +L L K FQ + ++ SR + EM+ +
Sbjct: 172 --WMLVNPESNFCFKVL-NPYSPQVLERLTK-FQHMFGGGIIRVPHSRNSTHEMYFV 224
>gi|72080502|ref|YP_287560.1| haemolysin [Mycoplasma hyopneumoniae 7448]
gi|71913626|gb|AAZ53537.1| haemolysin [Mycoplasma hyopneumoniae 7448]
Length = 237
Score = 39.0 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 65/185 (35%), Gaps = 11/185 (5%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R A KL + ++ ++ I+D+G+S G ++Q G+ +
Sbjct: 49 KQKYVSRGALKLQAAYDYFKLNFQDKIILDIGASKGGFTQFCLEK-GAKKVYALDSGTNQ 107
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCE 163
LD + K + ++ + DL++ D+++ ++ ++ +
Sbjct: 108 LDYSLRINPKVCVKEKTNIKFVDK--SFFNDEIDLIVCDVSFISLKKVLAVVKNLLTQGK 165
Query: 164 AATFFALEMLNIGGDFLV------KTFQGGTTNDILCLLKKHFQKVIHV-KPVASRAE-S 215
++ K + N I+ K F+ + P+ R +
Sbjct: 166 NCITLLKPQFEANSKYVQKGGIVPKLYHKFLINRIIEFAKPSFEFLNFFESPIKGRKSKN 225
Query: 216 VEMFL 220
E FL
Sbjct: 226 TEYFL 230
>gi|224000615|ref|XP_002289980.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975188|gb|EED93517.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 536
Score = 39.0 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 16/115 (13%)
Query: 48 RARSAYKLLQINEKHQILQSNRRI--------------VDLGSSPGSWSQVAARITGSNA 93
+R+ YKL Q+ + ILQ +D+G+SPG W+QV
Sbjct: 314 VSRAYYKLAQLFDDDDILQGISETNTINPSQLLSHGAGMDVGASPGGWTQVLHNTLHIPT 373
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTI 148
+ + + + + GV + D + A +++ D +
Sbjct: 374 IVSIDLGVLAQRVLDLPGVYHLRADMCS--AKAKQVMAHHAPYSVIVCDACIDSY 426
>gi|311977768|ref|YP_003986888.1| hypothetical protein MIMI_gp0414 [Acanthamoeba polyphaga mimivirus]
gi|82000311|sp|Q5UQX0|YR383_MIMIV RecName: Full=Uncharacterized protein R383
gi|55417002|gb|AAV50652.1| unknown [Acanthamoeba polyphaga mimivirus]
gi|308204797|gb|ADO18598.1| putative FtsJ-like methyltransferase [Acanthamoeba polyphaga
mimivirus]
Length = 348
Score = 39.0 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 2/103 (1%)
Query: 126 EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF- 184
+ + Y ID + L +M G + +++ F
Sbjct: 132 NKQYNITNDINKAINIQLIYSRYSDIDIDENALIQLIYNDLSSLFQMQIQGSNMILQLFN 191
Query: 185 -QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
Q T ++ LL ++ + KP +S S +L+ G R
Sbjct: 192 VQTQVTVQLIYLLSSYYTEAYLYKPESSSDLSDNKYLILIGLR 234
>gi|296164594|ref|ZP_06847161.1| cytotoxin/hemolysin [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295900013|gb|EFG79452.1| cytotoxin/hemolysin [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 269
Score = 39.0 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-VAID 102
GW +R A+KL+ + I + RR +D G+S G +++V + V
Sbjct: 59 ERGWVSRGAHKLIGALDAFGIPVAGRRCLDAGASTGGFTEVLLHRGAAEVVAVDVGYGQL 118
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ V + + +AIGG DL+++D+++
Sbjct: 119 AWSLRCDPRVVV----VERTNVRDLSPEAIGGPVDLIVADLSF 157
>gi|21241659|ref|NP_641241.1| RNA 2'-O-ribose methyltransferase [Xanthomonas axonopodis pv. citri
str. 306]
gi|81804699|sp|Q8PNZ9|RLMM_XANAC RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|21107022|gb|AAM35777.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 347
Score = 39.0 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 55/160 (34%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ +++ R DLG++PG W+ V R + + +
Sbjct: 182 SRSALKLDEALLTLLTPEERDALVKPGMRAADLGAAPGGWTWVLTRQHVHVTSVDNGPLR 241
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + ++ F + +++ + P V MA + + +
Sbjct: 242 EHVLETGLVEHLRADGFHWKPAQPLDWMVCDMVEQPRRVAERMATWVREGWCRNTIFNLK 301
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + F+ + K+ +
Sbjct: 302 LPMKKRWDETRLCLD-------LFEQQAERSLSVRAKQLY 334
>gi|190572873|ref|YP_001970718.1| putative RNA 2'-O-ribose methyltransferase [Stenotrophomonas
maltophilia K279a]
gi|269969534|sp|B2FPH5|RLMM_STRMK RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|190010795|emb|CAQ44404.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 355
Score = 38.6 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ + + R DLG++PG W+ V R + + +
Sbjct: 189 SRSALKLDEALLTLLMPEEREALAKPGMRAADLGAAPGGWTWVLTRQHMHVLSIDNGPLR 248
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+LD + ++ F + +++ + P V MA + +
Sbjct: 249 QHVLDTGLVEHLRADGFHWHPEQPLDWMVCDMVEQPRRVAERMATWFREGWCRHAIFNLK 308
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + FQ ++ K+ +
Sbjct: 309 LPMKKRWDETRLCLD-------LFQDQAGKPLVVRAKQLY 341
>gi|332179|gb|AAA46562.1| L Protein [Lake Victoria marburgvirus]
Length = 2330
Score = 38.6 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 14/86 (16%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKKHFQ 201
T K + + + ++K F T ++ +++
Sbjct: 2040 LQWTAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMKNAIQYYG 2098
Query: 202 KVIHVKPVASRAESVEMFLLAKGFRK 227
+V KP +S A++ E +L G R+
Sbjct: 2099 QVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|62421412|gb|AAX82481.1| polyprotein [Alfuy virus]
Length = 3434
Score = 38.6 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 44/239 (18%), Positives = 75/239 (31%), Gaps = 36/239 (15%)
Query: 4 PPGSSSRRGLTQKVKNRSCQGSSRDWLNRH--------INDPYVQRAQLEGWR------A 49
GS+ R L ++ K+R Q S ++ D ++A+ G +
Sbjct: 2528 KRGSAGGRTLGEQWKDRLNQLSKEEFFQYRKEAIIEVDRTDA--RKARKAGNVTGGHPVS 2585
Query: 50 RSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA-----RITGSNANNTRVVAIDIL 104
R KL + E+ Q L R+VDLG G WS AA + +L
Sbjct: 2586 RGTAKLRWLVER-QFLNPVGRVVDLGCGRGGWSYYAATMKRVQEVRGYTKGGAGHEEPML 2644
Query: 105 DMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEA 164
+ K D +L D+ +H L
Sbjct: 2645 MQSYGWNIVSLKSGVDVFY-------RPSEVSDTLLCDIGESASSAEVEEHRTLRILEMV 2697
Query: 165 ATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
+ + + F +K + + L++ F + P+ SR S EM+ +
Sbjct: 2698 SDWLSRGPRE----FCIKVLCPYMPKVIEKMEQLQRRFGGGLVRVPL-SRNSSHEMYWV 2751
>gi|239946890|ref|ZP_04698643.1| hemolysin [Rickettsia endosymbiont of Ixodes scapularis]
gi|239921166|gb|EER21190.1| hemolysin [Rickettsia endosymbiont of Ixodes scapularis]
Length = 251
Score = 38.6 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
D V+ + + +R A KL+ + +I N +D+GSS G +++V
Sbjct: 51 DIKVKLPK-HNYVSRGALKLIAALDYFKIDPENLVCIDIGSSTGGFTEVLLER 102
>gi|118469022|ref|YP_888048.1| hemolysin A [Mycobacterium smegmatis str. MC2 155]
gi|118170309|gb|ABK71205.1| hemolysin A [Mycobacterium smegmatis str. MC2 155]
Length = 269
Score = 38.6 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
V + W +R A+KL+ + + RR +D G+S G +++V + V
Sbjct: 54 VIESDERTWVSRGAHKLIGALDAFGLSVEGRRCLDAGASTGGFTEVLLDRGAAEVVAADV 113
Query: 99 -VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ V + + +AIGG ++++D+++
Sbjct: 114 GYGQLAWSLRSDPRVHVL----ERTNVRDLTPEAIGGPVQMIVADLSF 157
>gi|254688050|gb|ACT79211.1| polymerase [Lake Victoria marburgvirus]
Length = 2327
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F G T ++ +
Sbjct: 2037 SDILTMDAETTKEETREQLYKTIINIWARTSPNIPKTS-IIKVFLLDYGGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|254688042|gb|ACT79204.1| polymerase [Lake Victoria marburgvirus]
gi|254688058|gb|ACT79218.1| polymerase [Lake Victoria marburgvirus]
Length = 2327
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F G T ++ +
Sbjct: 2037 SDILTMDAETTKEETREQLYKTIINIWARTSPNIPKTS-IIKVFLLDYGGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|81945908|sp|Q8B0I0|L_VSIVN RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|23305067|gb|AAN16984.1| L polymerase protein [Vesicular stomatitis Indiana virus]
Length = 2109
Score = 38.6 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF---QGGTTNDILCLLKKHFQKV 203
+ D ++ + + +L+ G + KT+ + + + +L F+ V
Sbjct: 1760 VMDMEVRDSSTSLKIETNVRNYVHRILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTV 1819
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
V+ S +++ E++++ KG +K
Sbjct: 1820 DLVQTEFSSSQTSEVYMVCKGLKK 1843
>gi|254688066|gb|ACT79225.1| polymerase [Lake Victoria marburgvirus]
Length = 2327
Score = 38.6 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F G T ++ +
Sbjct: 2037 SDILTMDAETTKEETREQLYKTIINIWARTSPNIPKTS-IIKVFLLDYGGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|123820544|sp|Q1PDC4|L_MABVR RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|91177750|gb|ABE27074.1| polymerase [Lake Victoria marburgvirus - Ravn]
gi|151564213|gb|ABS17554.1| L protein [Lake Victoria marburgvirus - Ravn]
gi|187480759|gb|ACD13008.1| L protein [Lake Victoria marburgvirus - Ravn]
gi|187480767|gb|ACD13015.1| L protein [Lake Victoria marburgvirus - Ravn]
gi|187480775|gb|ACD13022.1| L protein [Lake Victoria marburgvirus - Ravn]
Length = 2327
Score = 38.6 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F G T ++ +
Sbjct: 2037 SDILTMDAETTKEETREQLYKTIINIWARTSPNIPKTS-IIKVFLLDYGGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|91177774|gb|ABE27095.1| polymerase [Lake Victoria marburgvirus - DRC1999]
Length = 2327
Score = 38.6 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F G T ++ +
Sbjct: 2037 SDILTMDAETTKEETREQLYKTIINIWARTSPNIPKTS-IIKVFLLDYGGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|158539115|ref|YP_001531159.1| L protein [Lake Victoria marburgvirus]
gi|77543433|gb|ABA87130.1| L protein [Lake Victoria marburgvirus - Musoke]
Length = 2331
Score = 38.6 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|40388386|gb|AAR85459.1| L protein [Lake Victoria marburgvirus]
Length = 2331
Score = 38.6 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|40388394|gb|AAR85466.1| L protein [Lake Victoria marburgvirus]
Length = 2331
Score = 38.6 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|229817935|ref|ZP_04448217.1| hypothetical protein BIFANG_03222 [Bifidobacterium angulatum DSM
20098]
gi|229784539|gb|EEP20653.1| hypothetical protein BIFANG_03222 [Bifidobacterium angulatum DSM
20098]
Length = 271
Score = 38.6 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 44/144 (30%), Gaps = 19/144 (13%)
Query: 43 QLEGWRARSAYKLLQINEKHQI----LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
+ E + +R AYKL+ E + +D+G+S G + V R RV
Sbjct: 77 KGEDYVSRGAYKLVGAFEAFHEQGLAEPKGLQCLDIGASTGGFCDVLLRR-----GAGRV 131
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRT 158
VA+D+ + + + I + G N V +D D
Sbjct: 132 VALDVGHGQLDPRI----------ATDPRIIEMSGVNIRDVFADDLPFRPQMIVSDVSFI 181
Query: 159 MSLCEAATFFALEMLNIGGDFLVK 182
+ LVK
Sbjct: 182 SLTYVIPVIARIAAPGAAVVLLVK 205
>gi|149941286|emb|CAM84182.2| polymerase [Vesicular stomatitis Indiana virus]
Length = 2109
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF---QGGTTNDILCLLKKHFQKV 203
+ D ++ + + +L+ G + KT+ + + + +L F+ V
Sbjct: 1760 VMDMEVRDSSTSLKIETNVRNYVHRILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTV 1819
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
V+ S +++ E++++ KG +K
Sbjct: 1820 DLVQTEFSSSQTSEVYMVCKGLKK 1843
>gi|149941171|emb|CAM84177.1| polymerase [Vesicular stomatitis Indiana virus]
Length = 2109
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF---QGGTTNDILCLLKKHFQKV 203
+ D ++ + + +L+ G + KT+ + + + +L F+ V
Sbjct: 1760 VMDMEVRDSSTSLKIETNVRNYVHRILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTV 1819
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
V+ S +++ E++++ KG +K
Sbjct: 1820 DLVQTEFSSSQTSEVYMVCKGLKK 1843
>gi|1350906|sp|P31352|L_MABVM RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|541784|emb|CAA78120.1| polymerase [Lake Victoria marburgvirus]
Length = 2331
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|1173173|sp|P03523|L_VSIVA RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|61851|emb|CAA25453.1| polymerase L [Vesicular stomatitis virus]
Length = 2109
Score = 38.6 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF---QGGTTNDILCLLKKHFQKV 203
+ D ++ + + +L+ G + KT+ + + + +L F+ V
Sbjct: 1760 VMDMEVRDSSTSLKIETNVRNYVHRILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTV 1819
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
V+ S +++ E++++ KG +K
Sbjct: 1820 DLVQTEFSSSQTSEVYMVCKGLKK 1843
>gi|218457798|gb|ACK77585.1| polymerase [Recombinant vesicular stomatitis Indiana virus
rVSV-G/GFP]
Length = 2109
Score = 38.2 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF---QGGTTNDILCLLKKHFQKV 203
+ D ++ + + +L+ G + KT+ + + + +L F+ V
Sbjct: 1760 VMDMEVRDSSTSLKIETNVRNYVHRILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTV 1819
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
V+ S +++ E++++ KG +K
Sbjct: 1820 DLVQTEFSSSQTSEVYMVCKGLKK 1843
>gi|144678905|gb|ABP01784.1| large protein [Vesicular stomatitis Indiana virus]
gi|194272588|gb|ACF37251.1| L protein [Vesicular stomatitis Indiana virus]
Length = 2109
Score = 38.2 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF---QGGTTNDILCLLKKHFQKV 203
+ D ++ + + +L+ G + KT+ + + + +L F+ V
Sbjct: 1760 VMDMEVRDSSTSLKIETNVRNYVHRILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTV 1819
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
V+ S +++ E++++ KG +K
Sbjct: 1820 DLVQTEFSSSQTSEVYMVCKGLKK 1843
>gi|81965433|sp|Q98776|L_VSIVM RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|336028|gb|AAA48441.1| polymerase [Vesicular stomatitis Indiana virus]
Length = 2109
Score = 38.2 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF---QGGTTNDILCLLKKHFQKV 203
+ D ++ + + +L+ G + KT+ + + + +L F+ V
Sbjct: 1760 VMDMEVRDSSTSLKIETNVRNYVHRILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTV 1819
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
V+ S +++ E++++ KG +K
Sbjct: 1820 DLVQTEFSSSQTSEVYMVCKGLKK 1843
>gi|9627234|ref|NP_041716.1| polymerase (L protein) [Vesicular stomatitis Indiana virus]
gi|335878|gb|AAA48371.1| polymerase (L protein) [Vesicular stomatitis Indiana virus]
Length = 2109
Score = 38.2 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF---QGGTTNDILCLLKKHFQKV 203
+ D ++ + + +L+ G + KT+ + + + +L F+ V
Sbjct: 1760 VMDMEVRDSSTSLKIETNVRNYVHRILDEQGVLIYKTYGTYICESEKNAVTILGPMFKTV 1819
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
V+ S +++ E++++ KG +K
Sbjct: 1820 DLVQTEFSSSQTSEVYMVCKGLKK 1843
>gi|170070490|ref|XP_001869598.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167866401|gb|EDS29784.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 527
Score = 38.2 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 205 HVKPVASRAESVEMFLLAKG 224
+KP SR + E +++ +
Sbjct: 108 ILKPCTSRPANSEHYVVCQD 127
>gi|118462925|ref|YP_882261.1| hemolysin A [Mycobacterium avium 104]
gi|118164212|gb|ABK65109.1| hemolysin A [Mycobacterium avium 104]
Length = 269
Score = 38.2 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
GW +R A+KLL + +I + RR +D G+S G +++V G+ V
Sbjct: 59 ERGWVSRGAHKLLGALDAFEIAVAGRRCLDAGASTGGFTEVLLDR-GAAEVVAVDVGYGQ 117
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
L + + + +AIGG DLV++D+++ ++
Sbjct: 118 LAWSLRSDARVVV--VERTNVRDLTPEAIGGPADLVVADLSFISLC 161
>gi|150395716|ref|YP_001326183.1| hemolysin A [Sinorhizobium medicae WSM419]
gi|150027231|gb|ABR59348.1| hemolysin A [Sinorhizobium medicae WSM419]
Length = 251
Score = 38.2 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 19/140 (13%), Positives = 47/140 (33%), Gaps = 4/140 (2%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-VAID 102
+ + +R+A KLL + + S + +D+G+S G +++V + ++ V
Sbjct: 62 AQDYVSRAALKLLTALDHFGLDPSEQTCLDVGASTGGFTEVLLKRGAAHVVAVDVGHGQI 121
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
+ V + + + ++SD+++ ++ L
Sbjct: 122 HPRVAEDPRVTNIEGLNARSMTRD---DIGERAVTFIVSDVSFISLKLALPPALGLAEPG 178
Query: 163 EAATFFALEMLNIGGDFLVK 182
G D + K
Sbjct: 179 ACCVLLVKPQFEAGRDAISK 198
>gi|41407499|ref|NP_960335.1| TlyA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|254775529|ref|ZP_05217045.1| TlyA [Mycobacterium avium subsp. avium ATCC 25291]
gi|41395852|gb|AAS03718.1| TlyA [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 269
Score = 38.2 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
GW +R A+KLL + +I + RR +D G+S G +++V G+ V
Sbjct: 59 ERGWVSRGAHKLLGALDAFEIAVAGRRCLDAGASTGGFTEVLLDR-GAAEVVAVDVGYGQ 117
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
L + + + +AIGG DLV++D+++ ++
Sbjct: 118 LAWSLRSDARVVV--VERTNVRDLTPEAIGGPADLVVADLSFISLC 161
>gi|73670608|ref|YP_306623.1| FtsJ-like methyltransferase [Methanosarcina barkeri str. Fusaro]
gi|72397770|gb|AAZ72043.1| FtsJ-like methyltransferase [Methanosarcina barkeri str. Fusaro]
Length = 236
Score = 38.2 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG 90
Q +G+ +KL I E+ IL+ ++DLGSS G + A+ I G
Sbjct: 56 QPQGY-----FKLKLIQEESGILKPGDEVLDLGSSAGGFLLFASEIVG 98
>gi|171673115|gb|ACB47438.1| L polymerase protein [Cocal virus]
Length = 2108
Score = 38.2 bits (87), Expect = 0.80, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG---GTTNDILCLLKKHFQKV 203
+ D ++ + + +L G + KT+ ++L LL +FQ+V
Sbjct: 1760 VMDMEVRDPSMSLKIEQNLRHNIHNLLQQEGTLIYKTYGTHLVEAEENVLTLLGPYFQRV 1819
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
V+ S +++ E++ + +G +
Sbjct: 1820 ELVQTDYSSSQTSEVYFVGRGLK 1842
>gi|114706809|ref|ZP_01439709.1| hemolysin-like protein [Fulvimarina pelagi HTCC2506]
gi|114537757|gb|EAU40881.1| hemolysin-like protein [Fulvimarina pelagi HTCC2506]
Length = 266
Score = 38.2 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
G+ +R+A KL+ + I + +D+G+S G +SQV +
Sbjct: 75 GYVSRAALKLIAGLDAFAIEPAGLDCLDIGASTGGFSQVLLQR 117
>gi|288818047|ref|YP_003432394.1| hemolysin [Hydrogenobacter thermophilus TK-6]
gi|288787446|dbj|BAI69193.1| hemolysin [Hydrogenobacter thermophilus TK-6]
gi|308751648|gb|ADO45131.1| hemolysin A [Hydrogenobacter thermophilus TK-6]
Length = 261
Score = 38.2 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 60/189 (31%), Gaps = 14/189 (7%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R YKL E I +D+GSS G ++ + V +
Sbjct: 59 YVSRGGYKLEHALEGFGIDVRGFVALDVGSSTGGFTDCLLQRGVIKVYAVDVGRAQMDIK 118
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
+ D+ + D++ D+++ ++ ++ +
Sbjct: 119 LRQDPRVILYEE---TDARSLTESHVPEKADIITVDVSFISVTKVLPHVVKFLKEGGILL 175
Query: 167 FFALEMLNIGGDFLVKTFQGGTTNDILCLLKKH-------FQK--VIHVKPVASRAESVE 217
+ D + K + + +LK FQ V+ KP S + E
Sbjct: 176 VLVKPQFELTPDKVKKGIVRSSEDKFQAVLKVCQKLKDLGFQIGGVLKAKPRGS-KGNEE 234
Query: 218 MFLLAKGFR 226
FLLA G +
Sbjct: 235 FFLLA-GKK 242
>gi|288931952|ref|YP_003436012.1| RNA-binding S4 domain protein [Ferroglobus placidus DSM 10642]
gi|288894200|gb|ADC65737.1| RNA-binding S4 domain protein [Ferroglobus placidus DSM 10642]
Length = 208
Score = 38.2 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 55/177 (31%), Gaps = 25/177 (14%)
Query: 50 RSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPI 109
R YKL ++++K+ I++ ++DLGSS G + A+ L
Sbjct: 57 RGYYKLKELDKKYGIVEEGDIVLDLGSSAGGFLLYASEKAK-------------LVYGIE 103
Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
+F + + IR I S + + + SL F
Sbjct: 104 YSKEFEDSLREIEEERKNIRVFIDDAFTFDTSRLDELDVILCDLTLEPEDSLKALMRFVE 163
Query: 170 LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
F+ K + +I + + V K E +++ + R
Sbjct: 164 KLKKGGKVLFVSK-ERIPEFPEIFEV-----EAVEKAKDR------REYYIILRKLR 208
>gi|54020395|ref|YP_115731.1| hemolysin [Mycoplasma hyopneumoniae 232]
gi|53987568|gb|AAV27769.1| TlyA haemolysin [Mycoplasma hyopneumoniae 232]
Length = 237
Score = 38.2 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 59/169 (34%), Gaps = 9/169 (5%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R A KL + ++ ++ I+D+G+S G ++Q G+ +
Sbjct: 49 KQKYVSRGALKLQAAYDYFKLNFQDKIILDIGASKGGFTQFCLEK-GAKKVYALDSGTNQ 107
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG------HRKIDHLR 157
LD + K + ++ + DL++ D+++ ++ + +
Sbjct: 108 LDYSLRINPKVCVKEKTNIKFVDK--SFFNDEIDLIVCDVSFISLKKILAVVKNLLTQGK 165
Query: 158 TMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHV 206
F A G + K + N I+ K F+ +
Sbjct: 166 NFITLLKPQFEANSKYVQKGGIVPKLYHKFLINRIIEFAKPSFEFLNFF 214
>gi|254523702|ref|ZP_05135757.1| RNA 2-O-ribose methyltransferase, SAM-dependent domain
[Stenotrophomonas sp. SKA14]
gi|219721293|gb|EED39818.1| RNA 2-O-ribose methyltransferase, SAM-dependent domain
[Stenotrophomonas sp. SKA14]
Length = 359
Score = 38.2 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ + + R DLG++PG W+ V R + + +
Sbjct: 193 SRSALKLDEALLTLLTPEEREALARPGMRAADLGAAPGGWTWVLTRQHMHVLSIDNGPLR 252
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+LD + ++ F + +++ + P V MA + +
Sbjct: 253 QHVLDTGLVEHLRADGFHWHPEQPLDWMVCDMVEQPRRVAERMATWFREGWCRHAIFNLK 312
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + FQ ++ K+ +
Sbjct: 313 LPMKKRWDETRLCLD-------LFQDQAGKPLVVRAKQLY 345
>gi|151564221|gb|ABS17561.1| L Protein [Lake Victoria marburgvirus - Ci67]
gi|305862088|gb|ADM72987.1| L protein [Lake Victoria marburgvirus]
gi|305862096|gb|ADM72994.1| L protein [Lake Victoria marburgvirus]
gi|305862104|gb|ADM73001.1| L protein [Lake Victoria marburgvirus]
Length = 2331
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMRNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|86609471|ref|YP_478233.1| hypothetical protein CYB_2023 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558013|gb|ABD02970.1| hypothetical protein CYB_2023 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 315
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 49 ARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAA 86
+RS +KLL+ + QI L + +DLG++PG WS++
Sbjct: 154 SRSEFKLLEAIQVFQIPLVPGGQALDLGAAPGGWSRILR 192
>gi|464697|sp|P35262|L_MABVP RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|296963|emb|CAA48508.1| structural protein [Lake Victoria marburgvirus]
gi|450915|emb|CAA82542.1| L protein [Lake Victoria marburgvirus]
gi|1095843|prf||2110212G RNA-dependent RNA polymerase
Length = 2331
Score = 38.2 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMRNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|194364456|ref|YP_002027066.1| putative RNA 2'-O-ribose methyltransferase [Stenotrophomonas
maltophilia R551-3]
gi|269969533|sp|B4SK51|RLMM_STRM5 RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|194347260|gb|ACF50383.1| conserved hypothetical protein [Stenotrophomonas maltophilia
R551-3]
Length = 355
Score = 37.8 bits (86), Expect = 1.00, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 15/160 (9%)
Query: 49 ARSAYKLLQIN-------EKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + E+ + + R DLG++PG W+ V R + + +
Sbjct: 189 SRSALKLDEALLTLLTPEEREALAKPGMRAADLGAAPGGWTWVLTRQHMHVLSIDNGPLR 248
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+LD + ++ F + +++ + P V MA + +
Sbjct: 249 QHVLDTGLVEHLRADGFHWHPEQPLDWMVCDMVEQPRRVAERMATWFREGWCRHAIFNLK 308
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHF 200
L + + FQ ++ K+ +
Sbjct: 309 LPMKKRWDETRLCLD-------LFQEQAGKPLVVRAKQLY 341
>gi|222147750|ref|YP_002548707.1| hemolysin A [Agrobacterium vitis S4]
gi|221734738|gb|ACM35701.1| hemolysin A [Agrobacterium vitis S4]
Length = 263
Score = 37.8 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 48/139 (34%), Gaps = 2/139 (1%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R+A KL+ + ++ S +D+G+S G +++V G+ V +
Sbjct: 66 AQDYVSRAALKLVAGLDHFKLDPSGHICLDVGASTGGFTEVLLHR-GAAHVVAIDVGHEQ 124
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCE 163
+ + L+ E ++SD+++ ++ + L
Sbjct: 125 FHPRLESDPRTTNIEGLNARYLE-PEDIGNQEFTFLVSDVSFISLKLALVPALEMAEPGS 183
Query: 164 AATFFALEMLNIGGDFLVK 182
G + + K
Sbjct: 184 HCLLLVKPQFEAGREAISK 202
>gi|71275159|ref|ZP_00651446.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71898240|ref|ZP_00680414.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|170731150|ref|YP_001776583.1| putative RNA 2'-O-ribose methyltransferase [Xylella fastidiosa M12]
gi|226705380|sp|B0U5D5|RLMM_XYLFM RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|71163968|gb|EAO13683.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71731979|gb|EAO34036.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|167965943|gb|ACA12953.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 351
Score = 37.8 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Query: 49 ARSAYKLLQI-------NEKHQILQSNRRIVDLGSSPGSWSQVAARI-TGSNANNTRVVA 100
+RSA KL + NE+ L+ + DLG++PG W+ V R + + +
Sbjct: 184 SRSALKLEEALITLLTPNEREAKLRPGMQATDLGAAPGGWTWVLIRQHLRVTSIDNAALR 243
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + V+ F + +++ + P V MA + +
Sbjct: 244 PPLLNHPLVQHVRADGFRWTPPRPMDWMVCDMVEQPRRVAERMAVWLREGWCRHMIFNLK 303
Query: 161 LCEAATFFALEMLNIG 176
L + +
Sbjct: 304 LPMKKRWDETRLCLER 319
>gi|157828691|ref|YP_001494933.1| hemolysin [Rickettsia rickettsii str. 'Sheila Smith']
gi|165933411|ref|YP_001650200.1| hemolysin [Rickettsia rickettsii str. Iowa]
gi|157801172|gb|ABV76425.1| hemolysin [Rickettsia rickettsii str. 'Sheila Smith']
gi|165908498|gb|ABY72794.1| hemolysin [Rickettsia rickettsii str. Iowa]
Length = 251
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
D V+ Q + +R A KL+ + +I N +D+GSS G +++V
Sbjct: 51 DIKVKLPQ-HNYVSRGALKLIAALDYFKIDPENLVCIDIGSSTGGFTEVLLER 102
>gi|222632590|gb|EEE64722.1| hypothetical protein OsJ_19578 [Oryza sativa Japonica Group]
Length = 719
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 26/75 (34%)
Query: 124 SWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT 183
+ D+VL D + G + SL A A L G F+ K
Sbjct: 46 VRRLMDSNGVAAFDVVLHDGSPNVGGAWAQEATAQSSLVIDAVRLATMFLAPKGAFITKV 105
Query: 184 FQGGTTNDILCLLKK 198
F+ N I+ LK+
Sbjct: 106 FRSQDYNAIMYCLKQ 120
>gi|91177742|gb|ABE27067.1| polymerase [Lake Victoria marburgvirus - Angola2005]
Length = 2331
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMRNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|123820522|sp|Q1PD54|L_MABVA RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|91177686|gb|ABE27018.1| polymerase [Lake Victoria marburgvirus - Angola2005]
gi|91177694|gb|ABE27025.1| polymerase [Lake Victoria marburgvirus - Angola2005]
gi|91177702|gb|ABE27032.1| polymerase [Lake Victoria marburgvirus - Angola2005]
gi|91177710|gb|ABE27039.1| polymerase [Lake Victoria marburgvirus - Angola2005]
gi|91177718|gb|ABE27046.1| polymerase [Lake Victoria marburgvirus - Angola2005]
gi|91177726|gb|ABE27053.1| polymerase [Lake Victoria marburgvirus - Angola2005]
gi|91177734|gb|ABE27060.1| polymerase [Lake Victoria marburgvirus - Angola2005]
Length = 2331
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMRNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFRK 227
++ +V KP +S A++ E +L G R+
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYL-CCGKRR 2123
>gi|329667057|gb|AEB93005.1| hemolysin-like protein [Lactobacillus johnsonii DPC 6026]
Length = 270
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Query: 43 QLEG--WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
+ +G + +R +KL + + I + +D+G+S G ++ VA + G+ V
Sbjct: 55 KDDGKKYVSRGGFKLEKALQVFNIDLKGKICLDIGASTGGFTDVALQ-NGAKLVYALDVG 113
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ L + + + + + G PD ++D+++
Sbjct: 114 YNQLAWKLRDNPQVIVMEKQNFR-YSKPVDFTDGLPDFAMTDVSF 157
>gi|121601957|ref|YP_988720.1| hemolysin A [Bartonella bacilliformis KC583]
gi|120614134|gb|ABM44735.1| hemolysin A [Bartonella bacilliformis KC583]
Length = 250
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 39/102 (38%), Gaps = 2/102 (1%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R+A KL+ + ++ + +D+G+S G ++QV S+ V
Sbjct: 58 AQNYVSRAALKLIGALDAFPVVTTQVIALDIGASTGGFTQVLLERGASHVIAVDVGHNQF 117
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
D + G DL++SD+++
Sbjct: 118 DACLSNNSAVTLLEGLNVRDLRQEH--LGGREIDLIVSDVSF 157
>gi|262199925|ref|YP_003271134.1| hemolysin A [Haliangium ochraceum DSM 14365]
gi|262083272|gb|ACY19241.1| hemolysin A [Haliangium ochraceum DSM 14365]
Length = 282
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 41 RAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
R++ + +R A KL++ + I + +D+G+S G ++ V R
Sbjct: 54 RSKDHPYVSRGALKLVEGLDTFAIDPAGLVALDIGASTGGFTDVLLRR 101
>gi|157803620|ref|YP_001492169.1| tyrosyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
gi|157784883|gb|ABV73384.1| tyrosyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
Length = 284
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+ +R A KL+ + +I N +D+GSS G ++QV
Sbjct: 89 KHNYVSRGALKLIAALDYFKITTENLVCIDIGSSTGGFTQVLLER 133
>gi|157825879|ref|YP_001493599.1| hemolysin A [Rickettsia akari str. Hartford]
gi|157799837|gb|ABV75091.1| Hemolysin A [Rickettsia akari str. Hartford]
Length = 247
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+D V+ Q + +R A KL+ + +I N +D+GSS G +++V
Sbjct: 50 SDIKVKLPQ-HNYVSRGALKLIAALDYFKIDPENLVCIDIGSSTGGFTEVLLER 102
>gi|34581533|ref|ZP_00143013.1| hemolysin [Rickettsia sibirica 246]
gi|28262918|gb|EAA26422.1| hemolysin [Rickettsia sibirica 246]
Length = 251
Score = 37.8 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
D V+ Q + +R A KL+ + +I N +D+GSS G +++V
Sbjct: 51 DIKVKLPQ-HNYVSRGALKLIAALDYFKIDPENLVCIDIGSSTGGFTEVLLER 102
>gi|268319203|ref|YP_003292859.1| hypothetical protein FI9785_717 [Lactobacillus johnsonii FI9785]
gi|262397578|emb|CAX66592.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
Length = 270
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 43 QLEG--WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
+ +G + +R +KL + + I + +D+G+S G ++ VA + G+ V
Sbjct: 55 KDDGKKYVSRGGFKLEKALQVFNIDLKGKICLDIGASTGGFTDVALQ-NGAKLVYALDVG 113
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ L + + G PD ++D+++
Sbjct: 114 YNQLAWKLRDN-PQVVVMEKQNFRYSKPEDFTDGLPDFAMTDVSF 157
>gi|319406942|emb|CBI80579.1| hemolysin-like protein [Bartonella sp. 1-1C]
Length = 249
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KLL + ++ + +D+G+S G ++QV S+ V
Sbjct: 61 YVSRAALKLLYALDVFPVMTNKITAIDIGASTGGFTQVLLERGASHVIALDVGHNQFDVR 120
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAY 145
L+ + ++ + G+ DL++SD+++
Sbjct: 121 LSGNDAITL---LEGLNVRDLKQEHLNGHEIDLIVSDVSF 157
>gi|229586878|ref|YP_002845379.1| Hemolysin A [Rickettsia africae ESF-5]
gi|228021928|gb|ACP53636.1| Hemolysin A [Rickettsia africae ESF-5]
Length = 251
Score = 37.8 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
D V+ Q + +R A KL+ + +I N +D+GSS G +++V
Sbjct: 51 DIKVKLPQ-HNYVSRGALKLIAALDYFKIDPENLVCIDIGSSTGGFTEVLLER 102
>gi|328544921|ref|YP_004305030.1| ribosomal RNA large subunit methyltransferase J [polymorphum gilvum
SL003B-26A1]
gi|326414663|gb|ADZ71726.1| Ribosomal RNA large subunit methyltransferase J [Polymorphum gilvum
SL003B-26A1]
Length = 247
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
G+ +R+A KLL ++ + ++R +D+G+S G ++QV
Sbjct: 58 ARGYVSRAALKLLAGLDQFGVDPADRVCLDIGASTGGFTQVLLER 102
>gi|238650335|ref|YP_002916187.1| hemolysin [Rickettsia peacockii str. Rustic]
gi|238624433|gb|ACR47139.1| hemolysin [Rickettsia peacockii str. Rustic]
Length = 253
Score = 37.8 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
D V+ Q + +R A KL+ + +I N +D+GSS G +++V
Sbjct: 51 DIKVKLPQ-HNYVSRGALKLIAALDYFKIDPENLVCIDIGSSTGGFTEVLLER 102
>gi|302882451|ref|XP_003040135.1| hypothetical protein NECHADRAFT_102067 [Nectria haematococca mpVI
77-13-4]
gi|256721004|gb|EEU34422.1| hypothetical protein NECHADRAFT_102067 [Nectria haematococca mpVI
77-13-4]
Length = 1962
Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 197 KKHFQKVIHVKPVASRAESVEMFLLAK 223
K+ F+++ K ASR E+ +L+A
Sbjct: 1008 KRMFKEIKDAKDKASRPENKNSYLVAT 1034
>gi|88855477|ref|ZP_01130141.1| hemolysin [marine actinobacterium PHSC20C1]
gi|88815384|gb|EAR25242.1| hemolysin [marine actinobacterium PHSC20C1]
Length = 264
Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
A+ + + +R+A+KL+ + I + +D+G+S G ++QV
Sbjct: 54 AETDHYVSRAAHKLVAALDSFGIDATGTLALDVGASTGGFTQVLLER 100
>gi|319787999|ref|YP_004147474.1| RNA 2'-O-ribose methyltransferase [Pseudoxanthomonas suwonensis
11-1]
gi|317466511|gb|ADV28243.1| putative RNA 2'-O-ribose methyltransferase [Pseudoxanthomonas
suwonensis 11-1]
Length = 351
Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 49 ARSAYKLLQI-------NEKHQILQSNRRIVDLGSSPGSWSQVAAR-ITGSNANNTRVVA 100
+RSA KL + E+ + L+ DLG++PG W+ V R + + +
Sbjct: 185 SRSALKLEEAFLALLGPEERERQLKPGMTAADLGAAPGGWTWVLTRHHLRVTSVDNGPLR 244
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+LD + ++ F + +++ + P V + MA + +
Sbjct: 245 QHVLDTGLVEHLRADGFHWKPAQPLDWMVCDMVEQPSRVAARMAQWFAEGWCRQAVFNLK 304
Query: 161 L 161
L
Sbjct: 305 L 305
>gi|291614216|ref|YP_003524373.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sideroxydans
lithotrophicus ES-1]
gi|291584328|gb|ADE11986.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Sideroxydans
lithotrophicus ES-1]
Length = 343
Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
Query: 49 ARSAYKLLQINEKHQ-------ILQSNRRIVDLGSSPGSWSQVAARI 88
+RS KL + E L+ +DLG++PG W+ +
Sbjct: 174 SRSYLKLAEAFEVFLDKKEQALWLKPGMTAIDLGAAPGGWTWQLVQR 220
>gi|91177766|gb|ABE27088.1| polymerase [Lake Victoria marburgvirus - DRC1999]
Length = 2331
Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 3/88 (3%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ +V KP +S A++ E +L R
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYLCCSKRR 2123
>gi|75548632|sp|Q6UY63|L_MABVO RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|33868625|gb|AAQ55261.1| L protein [Lake Victoria marburgvirus]
Length = 2331
Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 3/88 (3%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMKNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ +V KP +S A++ E +L R
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYLCCSKRR 2123
>gi|15892745|ref|NP_360459.1| hemolysin [Rickettsia conorii str. Malish 7]
gi|15619922|gb|AAL03360.1| hemolysin [Rickettsia conorii str. Malish 7]
Length = 251
Score = 37.4 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+ +R A KL+ + +I N +D+GSS G +++V
Sbjct: 58 QHNYVSRGALKLIAALDYFKIDPENLVCIDIGSSTGGFTEVLLER 102
>gi|72162433|ref|YP_290090.1| hemolysin A [Thermobifida fusca YX]
gi|71916165|gb|AAZ56067.1| hemolysin A [Thermobifida fusca YX]
Length = 266
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-VAIDILD 105
+ +R AYKL+ + + + RR +D G+S G ++ V R ++ V
Sbjct: 63 YVSRGAYKLIGALDAFAVDVTGRRCLDAGASTGGFTDVLLRRGAAHVVAVDVGYGQLAWS 122
Query: 106 MEPILGVKFFKFDFLDLDSWEF 127
+ V + + + +
Sbjct: 123 LRSDPRVTVLERQNVRELTPDQ 144
>gi|158699649|gb|ABW76843.1| polyprotein [Yaounde virus]
Length = 3430
Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 60/195 (30%), Gaps = 26/195 (13%)
Query: 40 QRAQLEGWR------ARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA-----RI 88
++A+ EG + +R KL + E+ + + ++VDLG G W+ AA +
Sbjct: 2566 RKARREGNKTSGHPVSRGTAKLRWLVER-KFVNPIGKVVDLGCGRGGWTYYAATLKLVQE 2624
Query: 89 TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTI 148
+L + K D + D+ +
Sbjct: 2625 VKGYTKGGPGHEEPMLMQSYGWNIVTMKSGIDVFY-------RASEPCDTLFCDIGESSS 2677
Query: 149 GHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHV 206
+ L + F +K + + +L++ F +
Sbjct: 2678 SPEVEETRTIRVLEMVEDWLHRGPRE----FCIKVLCPYMPKVIERMEVLQRRFGGGLVR 2733
Query: 207 KPVASRAESVEMFLL 221
P+ SR + EM+ +
Sbjct: 2734 VPL-SRNSNHEMYWV 2747
>gi|150020827|ref|YP_001306181.1| hemolysin A [Thermosipho melanesiensis BI429]
gi|149793348|gb|ABR30796.1| hemolysin A [Thermosipho melanesiensis BI429]
Length = 264
Score = 37.4 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q E + +R YKL ++ + ++ D+G+S G ++ + G V
Sbjct: 54 QKEKYVSRGGYKLEGAHKSFKFEIKDKIACDIGASTGGFTDFLLQ-NGIKKVYCVDVGYG 112
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
L + K + + + + +
Sbjct: 113 QLHWKIRNNKKTIVLEKTNAKNLDLEEK 140
>gi|81945903|sp|Q8B0H5|L_VSIVS RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|23305073|gb|AAN16989.1| L polymerase protein [Vesicular stomatitis Indiana virus]
Length = 2109
Score = 37.4 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF---QGGTTNDILCLLKKHFQKV 203
+ D ++ + + +L+ G + KT+ + + + +L F+ V
Sbjct: 1760 VMDMEVRDSSTSLKIESNVRNYVHRILDEQGVLIYKTYGTYICESEKNAVTILGPLFKTV 1819
Query: 204 IHVKPVASRAESVEMFLLAKGFRK 227
V+ S +++ E++++ KG +K
Sbjct: 1820 DLVQTEFSSSQTSELYMVCKGLKK 1843
>gi|319403928|emb|CBI77516.1| hemolysin-like protein [Bartonella rochalimae ATCC BAA-1498]
Length = 237
Score = 37.4 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ + +R+A KLL + ++ + +D+G+S G ++QV S V
Sbjct: 46 AQSYVSRAALKLLYALDVFPVMTNKITAIDVGASTGGFTQVLLERGASYVIALDVGHNQF 105
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGN-PDLVLSDMAY 145
L+ + ++ + G+ DL++SD+++
Sbjct: 106 DVRLSGNDAITL---LEGLNVRDLKQEHLNGHEIDLIVSDVSF 145
>gi|146411793|gb|ABI54482.1| polyprotein [Jugra virus]
Length = 3390
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 60/178 (33%), Gaps = 14/178 (7%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
+R + KL I E+ L+ + R+VDLG G WS A + + + +
Sbjct: 2541 VSRGSAKLNWIIER-GYLKPHGRVVDLGCGRGGWSYTCAAERSVSIVRGFTLGKNGHESP 2599
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
+ + L + +F ++ + V SD IG +
Sbjct: 2600 RL-------IESLGWNIIKFKDKSDVQKMEPVTSDTLLCDIGESSSNPEVEKERTLRVIE 2652
Query: 168 FALEMLNIGGD-FLVKTFQGGTTNDILCLLKKHFQKVI---HVKPVASRAESVEMFLL 221
++ F K +++ L+ FQ V+ SR + EM+ +
Sbjct: 2653 NMRRWMSPSTSAFCFKVLA-PYKPEVIEALES-FQLTYGGGIVRNPFSRNSTHEMYYV 2708
>gi|182682524|ref|YP_001830684.1| putative RNA 2'-O-ribose methyltransferase [Xylella fastidiosa M23]
gi|182632634|gb|ACB93410.1| conserved hypothetical protein [Xylella fastidiosa M23]
gi|307578802|gb|ADN62771.1| putative RNA 2'-O-ribose methyltransferase [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 366
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Query: 49 ARSAYKLLQI-------NEKHQILQSNRRIVDLGSSPGSWSQVA-ARITGSNANNTRVVA 100
+RSA KL + NE+ L+ DLG++PG W+ V + + + +
Sbjct: 199 SRSALKLEEALITLLTPNEREAKLRPGMCATDLGAAPGGWTWVLICQHLRVTSIDNAALR 258
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + V+ F ++ +++ + P V MA + +
Sbjct: 259 PPLLNHPLVQHVRADGFRWIPPRPMDWMVCDMVEQPRRVAERMAVWLREGWCRHMIFNLK 318
Query: 161 LCEAATFFALEMLNIG 176
L + +
Sbjct: 319 LPMKKRWDETRLCLER 334
>gi|15888079|ref|NP_353760.1| hemolysin [Agrobacterium tumefaciens str. C58]
gi|15155705|gb|AAK86545.1| hemolysin [Agrobacterium tumefaciens str. C58]
Length = 250
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI---------TGSNAN 94
+ + +R+A KL + ++ +D+G+S G +++V G
Sbjct: 61 AQAYVSRAALKLTAALDHFKLDPRGLDCLDVGASTGGFTEVLLHRGAKHVVAIDVGHGQI 120
Query: 95 NTRVVAIDILDMEPILGVKFFKFDFLDL 122
+ R+ + L +F D +D
Sbjct: 121 HPRIENDPRVTSLEGLNARFLTTDDIDE 148
>gi|50554297|ref|XP_504557.1| YALI0E29557p [Yarrowia lipolytica]
gi|49650426|emb|CAG80161.1| YALI0E29557p [Yarrowia lipolytica]
Length = 862
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 4 PPGSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQ 63
P G + R + RS + ++ W DP +RA+ R+R+ Y NE H+
Sbjct: 401 PSGRTEGRSWATPFRRRSKKDLNKGWNRSQSRDPAEERARTPNPRSRTPY---DSNETHE 457
Query: 64 ILQSNRRIVDLGSSPGSWSQVAA 86
L DL S Q AA
Sbjct: 458 ALSVGANTFDLSPSKSPAPQRAA 480
>gi|28199774|ref|NP_780088.1| putative RNA 2'-O-ribose methyltransferase [Xylella fastidiosa
Temecula1]
gi|81438278|sp|Q87AC0|RLMM_XYLFT RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|269969642|sp|B2I9N9|RLMM_XYLF2 RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|28057895|gb|AAO29737.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
Length = 351
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Query: 49 ARSAYKLLQI-------NEKHQILQSNRRIVDLGSSPGSWSQVA-ARITGSNANNTRVVA 100
+RSA KL + NE+ L+ DLG++PG W+ V + + + +
Sbjct: 184 SRSALKLEEALITLLTPNEREAKLRPGMCATDLGAAPGGWTWVLICQHLRVTSIDNAALR 243
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + V+ F ++ +++ + P V MA + +
Sbjct: 244 PPLLNHPLVQHVRADGFRWIPPRPMDWMVCDMVEQPRRVAERMAVWLREGWCRHMIFNLK 303
Query: 161 LCEAATFFALEMLNIG 176
L + +
Sbjct: 304 LPMKKRWDETRLCLER 319
>gi|254688090|gb|ACT79246.1| polymerase [Lake Victoria marburgvirus]
Length = 2331
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 3/88 (3%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMRYAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ +V KP +S A++ E +L R
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYLCCSKRR 2123
>gi|254688082|gb|ACT79239.1| polymerase [Lake Victoria marburgvirus]
Length = 2331
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 3/88 (3%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMRYAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ +V KP +S A++ E +L R
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYLCCSKRR 2123
>gi|109255261|ref|YP_654538.1| replicase [Citrus leprosis virus C]
gi|123863050|sp|Q1KZ59|POLG_CILVC RecName: Full=RNA replication protein; Includes: RecName:
Full=Methyltransferase; Includes: RecName: Full=Helicase;
Includes: RecName: Full=RNA-directed RNA polymerase
gi|85720661|gb|ABC75821.1| replicase [Citrus leprosis virus C]
Length = 2512
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 59/208 (28%), Gaps = 42/208 (20%)
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPIL------- 110
I I ++ + L + ++A+ + +++ + + D+ I
Sbjct: 845 IASYFNIFNNSYKGPFLNVYELGFMEIASSLEIPSSSGNKFLITDVWLHHCIKALRVLDP 904
Query: 111 --------------------------GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMA 144
+F + F + + + +V+
Sbjct: 905 HSNVIVLRSSNTSRIPDRYGVCDFTMDSEFHEESFCLSTTLSDVLNLGIYSQCMVVFSDL 964
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFA---LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
RT + + L+ GG + + F+ + L +L F+
Sbjct: 965 SRVPLKPFAPGFRTRTSVAERSNKILLAWSALSSGGTAVFRVFRPEEVPESLNMLTTLFE 1024
Query: 202 KVIHVKPVA---SRAESVEMFLLAKGFR 226
+ KP A S + +LL G R
Sbjct: 1025 DIRFFKPKAISTSIVD---GYLLCSGKR 1049
>gi|42519418|ref|NP_965348.1| hemolysin-like protein [Lactobacillus johnsonii NCC 533]
gi|41583706|gb|AAS09314.1| hemolysin-like protein [Lactobacillus johnsonii NCC 533]
Length = 270
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 43 QLEG--WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
+ +G + +R +KL + + I + +D+G+S G ++ VA + G+ V
Sbjct: 55 KDDGKKYVSRGGFKLEKALQVFNIDLKGKICLDIGASTGGFTDVALQ-NGAKLVYALDVG 113
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ L + + G PD ++D+++
Sbjct: 114 YNQLAWKLRDN-PQVVVMEKQNFRYSKPVDFTDGLPDFAMTDVSF 157
>gi|195970192|ref|NP_384985.2| hypothetical protein SMc00973 [Sinorhizobium meliloti 1021]
gi|307304209|ref|ZP_07583961.1| hemolysin A [Sinorhizobium meliloti BL225C]
gi|307320514|ref|ZP_07599929.1| hemolysin A [Sinorhizobium meliloti AK83]
gi|187904153|emb|CAC45451.2| Probable hemolysin [Sinorhizobium meliloti 1021]
gi|306893790|gb|EFN24561.1| hemolysin A [Sinorhizobium meliloti AK83]
gi|306902677|gb|EFN33270.1| hemolysin A [Sinorhizobium meliloti BL225C]
Length = 251
Score = 37.0 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 46/140 (32%), Gaps = 4/140 (2%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-VAID 102
+ + +R+A KL+ + + S + +D+G+S G +++V + ++ V
Sbjct: 62 AQDYVSRAALKLVAALDHFGLDPSEQTCLDVGASTGGFTEVLLKRGAAHVVAVDVGHGQI 121
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
+ V + + ++SD+++ ++ L
Sbjct: 122 HPRVAEDPRVTNIEGLNARSMTR---GDIDERAITFIVSDVSFISLKLALPPALGLAEPG 178
Query: 163 EAATFFALEMLNIGGDFLVK 182
G D + K
Sbjct: 179 ACCILLVKPQFEAGRDAISK 198
>gi|226941326|ref|YP_002796400.1| RNA 2'-O-ribose methyltransferase XF_0748 [Laribacter hongkongensis
HLHK9]
gi|269969531|sp|C1DB52|RLMM_LARHH RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|226716253|gb|ACO75391.1| Putative RNA 2'-O-ribose methyltransferase XF_0748 [Laribacter
hongkongensis HLHK9]
Length = 353
Score = 37.0 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
Query: 49 ARSAYKLLQINEKH-------QILQSNRRIVDLGSSPGSWSQVAARI 88
+RS KL + E L+ VDLG++PG W+ R
Sbjct: 177 SRSTLKLAEAFEVFLGEQGQQDKLKPGMTAVDLGAAPGGWTWQLLRR 223
>gi|163761046|ref|ZP_02168124.1| hemolysin-like protein [Hoeflea phototrophica DFL-43]
gi|162281827|gb|EDQ32120.1| hemolysin-like protein [Hoeflea phototrophica DFL-43]
Length = 259
Score = 37.0 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
+ + +R+A KL E + R +D+G+S G ++QV
Sbjct: 70 AQAYVSRAALKLKAGLEAFGFDPAGRTALDIGASTGGFTQVLLE 113
>gi|76446004|gb|ABA42875.1| polyprotein [Citrus leprosis virus C]
Length = 2512
Score = 37.0 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 59/208 (28%), Gaps = 42/208 (20%)
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPIL------- 110
I I ++ + L + ++A+ + +++ + + D+ I
Sbjct: 845 IASYFNIFNNSYKGPFLNVYELGFMEIASSLEIPSSSGNKFLITDVWLHHCIKALRVLDP 904
Query: 111 --------------------------GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMA 144
+F + F + + + +V+
Sbjct: 905 HSNVIVLRSSNTSRIPDRYGVCDFTMDSEFHEESFCLSTTLSDVLNLGIYSQCMVVFSDL 964
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFA---LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
RT + + L+ GG + + F+ + L +L F+
Sbjct: 965 SRVPLKPFAPGFRTRTSVAERSNKILLAWSALSSGGTAVFRVFRPEEVPESLNMLTTLFE 1024
Query: 202 KVIHVKPVA---SRAESVEMFLLAKGFR 226
+ KP A S + +LL G R
Sbjct: 1025 DIRFFKPKAISTSIVD---GYLLCSGKR 1049
>gi|41057601|ref|NP_958055.1| large protein [Mossman virus]
gi|33637711|gb|AAQ23993.1| large protein [Mossman virus]
Length = 2205
Score = 37.0 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 18/147 (12%), Positives = 48/147 (32%), Gaps = 9/147 (6%)
Query: 82 SQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
A ++ +N NN + + + ++ +
Sbjct: 1836 PAEVALVSKANGNNMSLTDNISILFNGKPESTWIGNLECFSYILNQVKLGTCSLVHCDME 1895
Query: 142 DMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF-QGGT-TNDILCLLKKH 199
+ T + +SL A + F++K G + +I+ ++ +H
Sbjct: 1896 GVGDKTSHQVLEEMCHVISLALAVGEYG-------SCFVLKMMPLGQDWSAEIIRVISEH 1948
Query: 200 FQKVIHVKPVASRAESVEMFLLAKGFR 226
+ + + P S +S E++++ G +
Sbjct: 1949 YDETLIYIPWFSNPDSTEVYVIGIGLK 1975
>gi|256821264|ref|YP_003145227.1| hypothetical protein Kkor_0037 [Kangiella koreensis DSM 16069]
gi|256794803|gb|ACV25459.1| hypothetical protein Kkor_0037 [Kangiella koreensis DSM 16069]
Length = 608
Score = 37.0 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 52/166 (31%), Gaps = 12/166 (7%)
Query: 27 RDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
+ W + +D Y ++ + E + Y +Q ++ +I++ I+ L S + V A
Sbjct: 79 QAWHQKQRSDYYYRKPKHENL---AFY--IQADQ-FEIVELG-SIIHLPESKSNP--VIA 129
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
+ S R+ + + V+ F+F + S + + + +
Sbjct: 130 DLAKSKYLKYRITHNHVTKSLYVPCVEVFRFYYSSSTSLAQQAFSGKKAEECLFN---PK 186
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDI 192
+ H + + ++ F+
Sbjct: 187 YTYEKFNQHFLMLRSRVRNIDAPFVGRIAFDTYALRAFENIYEKSF 232
>gi|296536788|ref|ZP_06898841.1| probable RNA 2'-O-ribose methyltransferase mtfA [Roseomonas
cervicalis ATCC 49957]
gi|296262883|gb|EFH09455.1| probable RNA 2'-O-ribose methyltransferase mtfA [Roseomonas
cervicalis ATCC 49957]
Length = 307
Score = 37.0 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 44 LEGWRARSAYKLLQ-INEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
EG +R+ KL + + + ++DLG++PG W+ A++
Sbjct: 145 REGPPSRAYLKLWEALTRLGRWPGPGETVLDLGAAPGGWTWALAQL 190
>gi|71901130|ref|ZP_00683236.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|71729094|gb|EAO31219.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
Length = 351
Score = 37.0 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 8/136 (5%)
Query: 49 ARSAYKLLQI-------NEKHQILQSNRRIVDLGSSPGSWSQVA-ARITGSNANNTRVVA 100
+RSA KL + NE+ L+ + DLG++PG W+ V + + + +
Sbjct: 184 SRSALKLEEALITLLTPNEREAKLRPGMQATDLGAAPGGWTWVLICQHLRVTSIDNAALR 243
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+L+ + V+ F ++ +++ + P V MA + +
Sbjct: 244 PPLLNHPLVQHVRADGFRWIPPRPMDWMVCDMVEQPRRVAERMAVWLREGWCRHMIFNLK 303
Query: 161 LCEAATFFALEMLNIG 176
L + +
Sbjct: 304 LPMKKRWDETRLCLER 319
>gi|29468608|ref|NP_047113.2| polymerase [Hendra virus]
gi|81923709|sp|O89344|L_HENDH RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|29432478|gb|AAC83194.2| polymerase [Hendra virus]
Length = 2244
Score = 37.0 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT-FQ-GGTTNDILCLLKKHFQK 202
M A+ ++ G + K F G + +L + + +F
Sbjct: 1939 SDMESGIDKQVEEIMIEHSHLISIAINVMIEDGVLVSKIAFAPGFPISRLLNMYRSYFGL 1998
Query: 203 VIHVKPVASRAESVEMFLLAK 223
V+ PV S ES E++L+
Sbjct: 1999 VLVCFPVYSNPESTEVYLICL 2019
>gi|254688074|gb|ACT79232.1| polymerase [Lake Victoria marburgvirus]
Length = 2331
Score = 37.0 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 3/88 (3%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETTKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMRNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ +V KP +S A++ E +L R
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYLCCSKRR 2123
>gi|328495204|gb|AEB21226.1| polymerase [Hendra virus]
Length = 2244
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT-FQ-GGTTNDILCLLKKHFQK 202
M A+ ++ G + K F G + +L + + +F
Sbjct: 1939 SDMESGIDKQVEEIMIEHSHLISIAINVMIEDGVLVSKIAFAPGFPISRLLNMYRSYFGL 1998
Query: 203 VIHVKPVASRAESVEMFLLAK 223
V+ PV S ES E++L+
Sbjct: 1999 VLVCFPVYSNPESTEVYLICL 2019
>gi|328495194|gb|AEB21217.1| polymerase [Hendra virus]
Length = 2244
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT-FQ-GGTTNDILCLLKKHFQK 202
M A+ ++ G + K F G + +L + + +F
Sbjct: 1939 SDMESGIDKQVEEIMIEHSHLISIAINVMIEDGVLVSKIAFAPGFPISRLLNMYRSYFGL 1998
Query: 203 VIHVKPVASRAESVEMFLLAK 223
V+ PV S ES E++L+
Sbjct: 1999 VLVCFPVYSNPESTEVYLICL 2019
>gi|300361958|ref|ZP_07058135.1| hemolysin A [Lactobacillus gasseri JV-V03]
gi|300354577|gb|EFJ70448.1| hemolysin A [Lactobacillus gasseri JV-V03]
Length = 270
Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 43 QLEG--WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
+ +G + +R +KL + + I ++ +D+G+S G ++ VA + G+ V
Sbjct: 55 KDDGKKYVSRGGFKLEKALQVFNINLKDKICLDIGASTGGFTDVALQ-NGAKLVYALDVG 113
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ L + + + + + G PD ++D+++
Sbjct: 114 YNQLAWKLRDNPQVIVMEKQNFR-YSKPADFTDGLPDFAMTDVSF 157
>gi|328495174|gb|AEB21199.1| polymerase [Hendra virus]
Length = 2244
Score = 37.0 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT-FQ-GGTTNDILCLLKKHFQK 202
M A+ ++ G + K F G + +L + + +F
Sbjct: 1939 SDMESGIDKQVEEIMIEHSHLISIAINVMIEDGVLVSKIAFAPGFPISRLLNMYRSYFGL 1998
Query: 203 VIHVKPVASRAESVEMFLLAK 223
V+ PV S ES E++L+
Sbjct: 1999 VLVCFPVYSNPESTEVYLICL 2019
>gi|91177758|gb|ABE27081.1| polymerase [Lake Victoria marburgvirus - DRC1999]
Length = 2331
Score = 37.0 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 3/88 (3%)
Query: 141 SDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTF--QGGTTNDILCLLKK 198
SD+ K + + + ++K F T ++ +
Sbjct: 2037 SDILTMDAETIKDETREQLYKTIVNIWTRTSPNIP-KISIIKVFLLDYEGTLFLMRNAIQ 2095
Query: 199 HFQKVIHVKPVASRAESVEMFLLAKGFR 226
++ +V KP +S A++ E +L R
Sbjct: 2096 YYGQVQLKKPYSSNAKNSEWYLCCSKRR 2123
>gi|53802683|ref|YP_112631.1| putative RNA 2'-O-ribose methyltransferase [Methylococcus
capsulatus str. Bath]
gi|81683223|sp|Q60CL4|RLMM_METCA RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|53756444|gb|AAU90735.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 352
Score = 37.0 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 49 ARSAYKLLQ-----INEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+RS KL + ++ +L+ VDLG++PG W+ R
Sbjct: 185 SRSTLKLEEAFLVFVDRPETMLRPGMSAVDLGAAPGGWTWQLVRR 229
>gi|328495214|gb|AEB21235.1| polymerase [Hendra virus]
Length = 2244
Score = 37.0 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT-FQ-GGTTNDILCLLKKHFQK 202
M A+ ++ G + K F G + +L + + +F
Sbjct: 1939 SDMESGIDKQVEEIMIEHSHLISIAINVMIEDGVLVSKIAFAPGFPISRLLNMYRSYFGL 1998
Query: 203 VIHVKPVASRAESVEMFLLAK 223
V+ PV S ES E++L+
Sbjct: 1999 VLVCFPVYSNPESTEVYLICL 2019
>gi|328495183|gb|AEB21207.1| polymerase [Hendra virus]
Length = 2244
Score = 37.0 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT-FQ-GGTTNDILCLLKKHFQK 202
M A+ ++ G + K F G + +L + + +F
Sbjct: 1939 SDMESGIDKQVEEIMIEHSHLISIAINVMIEDGVLVSKIAFAPGFPISRLLNMYRSYFGL 1998
Query: 203 VIHVKPVASRAESVEMFLLAK 223
V+ PV S ES E++L+
Sbjct: 1999 VLVCFPVYSNPESTEVYLICL 2019
>gi|238852561|ref|ZP_04642971.1| hemolysin A [Lactobacillus gasseri 202-4]
gi|238834707|gb|EEQ26934.1| hemolysin A [Lactobacillus gasseri 202-4]
Length = 270
Score = 36.7 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 43 QLEG--WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
+ +G + +R +KL + + I ++ +D+G+S G ++ VA + G+ V
Sbjct: 55 KDDGKKYVSRGGFKLEKALQVFNINLKDKTCLDIGASTGGFTDVALQ-NGAKLVYALDVG 113
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ L + + G PD ++D+++
Sbjct: 114 YNQLAWKLRDN-PQVVVMEKQNFRYSKPADFTDGLPDFAMTDVSF 157
>gi|308806163|ref|XP_003080393.1| Predicted 23S rRNA methylase containing THUMP domain (ISS)
[Ostreococcus tauri]
gi|116058853|emb|CAL54560.1| Predicted 23S rRNA methylase containing THUMP domain (ISS)
[Ostreococcus tauri]
Length = 424
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 49 ARSAYKLLQINEKHQI-LQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R+ +KL + + + ++ + D+G++PG W++ S + +++
Sbjct: 245 CRAYFKLHEALLRAGVPVKDDWNCADIGAAPGGWTRTLGERVTSGVVWA-IDPAELVLDP 303
Query: 108 PILGVKFFKFDFLD--LDSWEFIRQAIGGNPDLVLSDMAYPTIGH 150
+ VK + D E +R G +L++ D
Sbjct: 304 MPVNVKHLQVLAEDAVQTVREGLRATKTGELNLIVCDANMHPEAC 348
>gi|282855619|ref|ZP_06264933.1| hemolysin A [Pyramidobacter piscolens W5455]
gi|282586549|gb|EFB91803.1| hemolysin A [Pyramidobacter piscolens W5455]
Length = 270
Score = 36.7 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Query: 34 INDPYVQRAQLE--GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGS 91
+ D V R + GW +R A+KLL E+ + R +D+G+S G ++QV + +
Sbjct: 49 VKDAAVVRLKSGSGGWVSRGAHKLLTAIERFHLKLEGRVCLDVGASTGGFTQVMLKYGAA 108
Query: 92 NANNTRV-VAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
V + + V + ++ + P V SD ++
Sbjct: 109 KVYAVDVGYGLLDWSLRTDPRVVVMERR----NARFLTGEMFSPRPGFVCSDASF 159
>gi|203287950|ref|YP_002222965.1| hemolysin [Borrelia recurrentis A1]
gi|201085170|gb|ACH94744.1| hemolysin [Borrelia recurrentis A1]
Length = 263
Score = 36.7 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 59/164 (35%), Gaps = 9/164 (5%)
Query: 41 RAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
++ + + +R KL + E +I+ ++ VD+G+S G ++ + V
Sbjct: 57 ESKSKQFVSRGGDKLFEALEIFKIVVKDKICVDVGASTGGFTDCLLQEGAKLIYAVDVGL 116
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMS 160
+ I + + F + P+L + D+++ ++ + + +S
Sbjct: 117 NQLSYKLRID-----PRVKVFEKTNIFNIKKFDIQPNLAVIDVSFRSVISICANLIDKLS 171
Query: 161 LCEAATFFALEMLNIGGDFLVKTFQG----GTTNDILCLLKKHF 200
+ D +K F G N+IL + K F
Sbjct: 172 DKLIIALVKPQFELKDLDLNIKDFNGIVEHKYLNEILNKVIKKF 215
>gi|9634976|ref|NP_054697.1| RNA polymerase [Tupaia paramyxovirus]
gi|7536534|gb|AAF63393.1|AF079780_8 RNA polymerase [Tupaia paramyxovirus]
Length = 2270
Score = 36.7 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 10/106 (9%)
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML--------NIGGDFLVKT 183
+LS +++ ++ D + + G + K
Sbjct: 1943 NPECYCYILSTVSHESVSLIHCDLESNFEKDTETVIEEQCHILSLGLTLLSKDGILVTKL 2002
Query: 184 F--QGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFRK 227
G +L + F V V P S ES E +L+A ++
Sbjct: 2003 CPDASGYIVPLLRSYQNFFSTVEIVLPQFSNPESTEFYLVAYQIKR 2048
>gi|145683676|gb|ABP88817.1| polyprotein [Usutu virus]
Length = 3434
Score = 36.7 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 76/233 (32%), Gaps = 24/233 (10%)
Query: 4 PPGSSSRRGLTQKVKNRSCQGSSRDWLNRHIN-----D-PYVQRAQLEGWR------ARS 51
G R L ++ K + S D+L D ++A+ +G + +R
Sbjct: 2528 KRGRPGGRTLGEQWKEKLNGLSKEDFLKYRKEAITEVDRSAARKARRDGNKTGGHPVSRG 2587
Query: 52 AYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILG 111
+ KL + E+ Q ++ ++VDLG G WS AA + G
Sbjct: 2588 SAKLRWMVER-QFVKPIGKVVDLGCGRGGWSYYAATLKGVQEVRGY-----TKGGPGHEE 2641
Query: 112 VKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
+ +L + + + D + IG +
Sbjct: 2642 PMLMQSYGWNLVTMKSGVDVYYKPSE--PCDTLFCDIGESSSSAEVEEQRTLRILEMVSD 2699
Query: 172 MLNI-GGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
L +F +K + L +L++ + + P+ SR + EM+ +
Sbjct: 2700 WLQRGPREFCIKVLCPYMPRVMERLEVLQRRYGGGLVRVPL-SRNSNHEMYWV 2751
>gi|56692442|ref|YP_164264.1| polyprotein precursor [Usutu virus]
gi|45378908|gb|AAS59402.1| polyprotein precursor [Usutu virus]
Length = 3434
Score = 36.7 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 76/233 (32%), Gaps = 24/233 (10%)
Query: 4 PPGSSSRRGLTQKVKNRSCQGSSRDWLNRHIN-----D-PYVQRAQLEGWR------ARS 51
G R L ++ K + S D+L D ++A+ +G + +R
Sbjct: 2528 KRGRPGGRTLGEQWKEKLNGLSKEDFLKYRKEAITEVDRSAARKARRDGNKTGGHPVSRG 2587
Query: 52 AYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILG 111
+ KL + E+ Q ++ ++VDLG G WS AA + G
Sbjct: 2588 SAKLRWMVER-QFVKPIGKVVDLGCGRGGWSYYAATLKGVQEVRGY-----TKGGPGHEE 2641
Query: 112 VKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
+ +L + + + D + IG +
Sbjct: 2642 PMLMQSYGWNLVTMKSGVDVYYKPSE--PCDTLFCDIGESSSSAEVEEQRTLRILEMVSD 2699
Query: 172 MLNI-GGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
L +F +K + L +L++ + + P+ SR + EM+ +
Sbjct: 2700 WLQRGPREFCIKVLCPYMPRVMERLEVLQRRYGGGLVRVPL-SRNSNHEMYWV 2751
>gi|304373102|ref|YP_003856311.1| hypothetical protein MHR_0306 [Mycoplasma hyorhinis HUB-1]
gi|304309293|gb|ADM21773.1| hypothetical protein MHR_0306 [Mycoplasma hyorhinis HUB-1]
Length = 238
Score = 36.7 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 3/140 (2%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q + + +R AYKLL E +I N+ I+D+G+S G +SQV+ G+ V +
Sbjct: 50 QKKEFVSRGAYKLLAAIEAFKIDFENKVILDIGASTGGFSQVSLNY-GAKLVYALDVGKN 108
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
LD + K + +L S D V+ D+++ ++ +
Sbjct: 109 QLDYKLRQNSKIKSLEQTNLKSISKQM--FEVEIDKVVCDVSFISLKEVYKVVEHILKTN 166
Query: 163 EAATFFALEMLNIGGDFLVK 182
+ ++ K
Sbjct: 167 DDLIVLLKPQFEASSKYVEK 186
>gi|75548697|sp|Q6V1Q2|L_EBOZ5 RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|33860549|gb|AAQ55053.1| polymerase [Zaire ebolavirus]
Length = 2212
Score = 36.7 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIG--GDFLVKTFQGGTTNDIL--CLLKKHFQK 202
T+ +++ L EA L ++ ++K F T + L F
Sbjct: 1925 TMDAETTENINRSKLYEAVYKLILHHIDPSVLKAVVLKVFLSDTEGMLWLNDNLAPFFAT 1984
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
+KP+ S A S E +L F
Sbjct: 1985 GYLIKPITSSARSSEWYLCLTNF 2007
>gi|330723274|gb|AEC45644.1| hypothetical protein SRH_00375 [Mycoplasma hyorhinis MCLD]
Length = 238
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 3/140 (2%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q + + +R AYKLL E ++ N+ I+D+G+S G +SQV+ G+ V +
Sbjct: 50 QKKEFVSRGAYKLLAAIEAFKLDFENKVILDIGASTGGFSQVSLNY-GAKLVYALDVGNN 108
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
LD + K + +L S D V+ D+++ ++ +
Sbjct: 109 QLDYKLRQNSKIKSLEQTNLKSISKQM--FEVEIDKVVCDVSFISLKEVYKVVEHILKTN 166
Query: 163 EAATFFALEMLNIGGDFLVK 182
+ ++ K
Sbjct: 167 DDLIVLLKPQFEASSKYVEK 186
>gi|326796520|ref|YP_004314340.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinomonas mediterranea
MMB-1]
gi|326547284|gb|ADZ92504.1| ribosomal RNA methyltransferase RrmJ/FtsJ [Marinomonas mediterranea
MMB-1]
Length = 255
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 49/141 (34%), Gaps = 8/141 (5%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWS-----QVAARITGSNANNTRVVAI 101
+ +R A KL +++ I ++D+G S G ++ A ++ G + ++
Sbjct: 63 YVSRGALKLEGALKQYHIDFKGFAVLDVGQSTGGFTDCSLQHGAEKVVGVEVGHDQLDPT 122
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
+ I F + LD + D ++ D+++ + ++
Sbjct: 123 LRNNESVIC---FEGINARSLDKNDLEPHFPTKGFDAIVMDVSFISQMKILPQLPSLLAE 179
Query: 162 CEAATFFALEMLNIGGDFLVK 182
+G +F+ K
Sbjct: 180 NGYLITLVKPQFEVGQEFVSK 200
>gi|238854800|ref|ZP_04645130.1| hemolysin A [Lactobacillus jensenii 269-3]
gi|260664031|ref|ZP_05864884.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
jensenii SJ-7A-US]
gi|282933878|ref|ZP_06339226.1| hemolysin A [Lactobacillus jensenii 208-1]
gi|313472309|ref|ZP_07812801.1| hemolysin A [Lactobacillus jensenii 1153]
gi|238832590|gb|EEQ24897.1| hemolysin A [Lactobacillus jensenii 269-3]
gi|239529840|gb|EEQ68841.1| hemolysin A [Lactobacillus jensenii 1153]
gi|260561917|gb|EEX27886.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
jensenii SJ-7A-US]
gi|281301967|gb|EFA94221.1| hemolysin A [Lactobacillus jensenii 208-1]
Length = 270
Score = 36.7 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 7/148 (4%)
Query: 37 PYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNT 96
+ + + + +R +KL + + I +++ +D+G+S G ++ VA + G+
Sbjct: 51 HFYIKDDGQKYVSRGGFKLEKALKVFDIDLTDKLCLDIGASTGGFTDVALQ-NGAKKVYA 109
Query: 97 RVVAIDILDMEPILG---VKFFKFDFLDLDSWEFIRQAIGGNPDLVLS---DMAYPTIGH 150
V + L + V + +F S +F V D+ P +
Sbjct: 110 LDVGYNQLAWQLRDDSRVVVMERQNFRYSKSADFTDGLPDFAMTDVSFISLDLIMPPMFE 169
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGD 178
D + L + E + G
Sbjct: 170 ILKDQCDAVCLIKPQFEAGPEHVGKNGI 197
>gi|161653002|gb|ABX75372.1| polymerase [Zaire ebolavirus]
Length = 2212
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIG--GDFLVKTFQGGTTNDIL--CLLKKHFQK 202
T+ +++ L EA L ++ ++K F T + L F
Sbjct: 1925 TMDAETTENINRSKLYEAVYKLILHHIDPSVLKAVVLKVFLSDTEGMLWLNDNLAPFFAT 1984
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
+KP+ S A S E +L F
Sbjct: 1985 GYLIKPITSSARSSEWYLCLTNF 2007
>gi|11761753|gb|AAG40171.1|AF272001_8 L protein [Zaire ebolavirus]
Length = 2212
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIG--GDFLVKTFQGGTTNDIL--CLLKKHFQK 202
T+ +++ L EA L ++ ++K F T + L F
Sbjct: 1925 TMDAETTENINRSKLYEAVYKLILHHIDPSVLKAVVLKVFLSDTEGMLWLNDNLAPFFAT 1984
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
+KP+ S A S E +L F
Sbjct: 1985 GYLIKPITSSARSSEWYLCLTNF 2007
>gi|21702655|gb|AAM76038.1| L protein [Zaire ebolavirus]
Length = 2212
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIG--GDFLVKTFQGGTTNDIL--CLLKKHFQK 202
T+ +++ L EA L ++ ++K F T + L F
Sbjct: 1925 TMDAETTENINRSKLYEAVYKLILHHIDPSVLKAVVLKVFLSDTEGMLWLNDNLAPFFAT 1984
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
+KP+ S A S E +L F
Sbjct: 1985 GYLIKPITSSARSSEWYLCLTNF 2007
>gi|10313999|ref|NP_066251.1| L [Zaire ebolavirus]
gi|8489003|sp|Q05318|L_EBOZM RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|2546941|emb|CAA47483.1| L-polymerase, structural protein [Zaire ebolavirus]
gi|4262354|gb|AAD14589.1| polymerase [Zaire ebolavirus]
gi|23630490|gb|AAN37511.1| polymerase protein L [Zaire ebolavirus]
Length = 2212
Score = 36.7 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEMLNIG--GDFLVKTFQGGTTNDIL--CLLKKHFQK 202
T+ +++ L EA L ++ ++K F T + L F
Sbjct: 1925 TMDAETTENINRSKLYEAVYKLILHHIDPSVLKAVVLKVFLSDTEGMLWLNDNLAPFFAT 1984
Query: 203 VIHVKPVASRAESVEMFLLAKGF 225
+KP+ S A S E +L F
Sbjct: 1985 GYLIKPITSSARSSEWYLCLTNF 2007
>gi|146411787|gb|ABI54478.1| polyprotein [Saboya virus]
Length = 3390
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 18/180 (10%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV-AARITGSNANNTRVVAIDILDM 106
+R + KL + E+ L+ + R+VDLG G WS AA S+ +
Sbjct: 2541 VSRGSAKLNWMMER-GYLRPHGRVVDLGCGRGGWSYACAAERLVSSVKGFTLGKAGHETP 2599
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
I + L + +F + G + SD IG +
Sbjct: 2600 RLI--------ESLGWNIIKFKDKCDVGRMQPIASDTLLCDIGESSSNPEIEKERTLKVI 2651
Query: 167 FFALEMLNIGG-DFLVKTFQGGTTNDILCLLKKHFQKVI----HVKPVASRAESVEMFLL 221
++ F K +++ L+ FQ P+ SR + EM+ +
Sbjct: 2652 EIVRNWMSPTTSSFCFKVLA-PYKPEVIEALES-FQLSHGGGLVRNPL-SRNSTHEMYFV 2708
>gi|256851325|ref|ZP_05556714.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
jensenii 27-2-CHN]
gi|260660749|ref|ZP_05861664.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
jensenii 115-3-CHN]
gi|282933230|ref|ZP_06338617.1| hemolysin A [Lactobacillus jensenii 208-1]
gi|297206195|ref|ZP_06923590.1| hemolysin A [Lactobacillus jensenii JV-V16]
gi|256616387|gb|EEU21575.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
jensenii 27-2-CHN]
gi|260548471|gb|EEX24446.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
jensenii 115-3-CHN]
gi|281302734|gb|EFA94949.1| hemolysin A [Lactobacillus jensenii 208-1]
gi|297149321|gb|EFH29619.1| hemolysin A [Lactobacillus jensenii JV-V16]
Length = 270
Score = 36.7 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Query: 37 PYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNT 96
+ + + + +R +KL + + I +++ +D+G+S G ++ VA + +G+
Sbjct: 51 KFYIKDDGQKYVSRGGFKLEKALKVFDIDLTDKLCLDIGASTGGFTDVALQ-SGAKKVYA 109
Query: 97 RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
V + L + + + + + G PD ++D+++
Sbjct: 110 LDVGYNQLAWQLRDDSRVIVMERQNFR-YSKPADFTEGLPDFAMTDVSF 157
>gi|301111656|ref|XP_002904907.1| FtsJ methyltransferase domain-containing protein, putative
[Phytophthora infestans T30-4]
gi|262095237|gb|EEY53289.1| FtsJ methyltransferase domain-containing protein, putative
[Phytophthora infestans T30-4]
Length = 348
Score = 36.3 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 44/190 (23%), Gaps = 46/190 (24%)
Query: 44 LEGWRARSAYKLLQINEKHQIL-----QSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
+ RSA KL ++ Q + D+ PG +S+ +
Sbjct: 94 KHRFLNRSAMKLATLDHIFQWTRSFNQKETFSFADICGGPGGFSEYL------------L 141
Query: 99 VAIDILDMEPILGVKFFKFDFLDLDSW--EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHL 156
+ G+ +F + D+ D +
Sbjct: 142 WRTEQTSAVHGYGITLKDAANNCDWRLPSKFREMFTICYGEDGTGDLYSLANIRNFRDIV 201
Query: 157 RTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESV 216
R A G D + SR S
Sbjct: 202 RGQHPNGVDLAVAD----------------GGFLDARSQSNQ-----------TSRPASS 234
Query: 217 EMFLLAKGFR 226
E +++A+G R
Sbjct: 235 ERYIVARGLR 244
>gi|309811988|ref|ZP_07705754.1| ribosomal RNA large subunit methyltransferase J [Dermacoccus sp.
Ellin185]
gi|308434046|gb|EFP57912.1| ribosomal RNA large subunit methyltransferase J [Dermacoccus sp.
Ellin185]
Length = 345
Score = 36.3 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 40 QRAQLEGWRARSAYKLLQINEKHQILQ--SNRRIVDLGSSPGSWSQVAARI 88
+ A + +R+ +KL ++ ++ VDLG+SPG W+++
Sbjct: 178 RLAARKEQVSRAEFKLEEL---FGLIDVPRGDVAVDLGASPGGWTRILRSR 225
>gi|298675322|ref|YP_003727072.1| RNA-binding S4 domain-containing protein [Methanohalobium
evestigatum Z-7303]
gi|298288310|gb|ADI74276.1| RNA-binding S4 domain protein [Methanohalobium evestigatum Z-7303]
Length = 220
Score = 36.3 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 44 LEGW-RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG--SNANNTRVVA 100
EG+ R + +KL I EK ++ N ++D+GSS G + A+ I +R
Sbjct: 51 EEGFDRPQGYFKLQYIQEKTGLINKNDYVLDIGSSAGGFLLYASEIAAYVRGIEFSRYFE 110
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEF 127
++ + G F D + + +
Sbjct: 111 SELEKISSEYGNVSFVIDDIFTVTMDK 137
>gi|284161758|ref|YP_003400381.1| RNA-binding S4 domain protein [Archaeoglobus profundus DSM 5631]
gi|284011755|gb|ADB57708.1| RNA-binding S4 domain protein [Archaeoglobus profundus DSM 5631]
Length = 209
Score = 36.3 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 52 AYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+KL +++E +++ + ++DLGSS G + A+
Sbjct: 59 YWKLKELDEMWNLIKKDDIVLDLGSSAGGFLLYASEK 95
>gi|45378910|gb|AAS59401.1| polyprotein precursor [Usutu virus]
Length = 3434
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 76/233 (32%), Gaps = 24/233 (10%)
Query: 4 PPGSSSRRGLTQKVKNRSCQGSSRDWLNRHIN-----D-PYVQRAQLEGWR------ARS 51
G R L ++ K + S D+L D ++A+ +G + +R
Sbjct: 2528 KRGRPGGRTLGEQWKEKLNGLSREDFLKYRKEAITEVDRSAARKARRDGNKTGGHPVSRG 2587
Query: 52 AYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILG 111
+ KL + E+ Q ++ ++VDLG G WS AA + G
Sbjct: 2588 SAKLRWMVER-QFVKPIGKVVDLGCGRGGWSYYAATLKGVQEVRGY-----TKGGPGHEE 2641
Query: 112 VKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
+ +L + + + D + IG +
Sbjct: 2642 PMLMQSYGWNLVTMKSGVDVYYKPSE--PCDTLFCDIGESSSSAEVEEQRTLRILEMVSD 2699
Query: 172 MLNI-GGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
L +F +K + L +L++ + + P+ SR + EM+ +
Sbjct: 2700 WLQRGPREFCIKVLCPYMPRVMERLEVLQRRYGGGLVRVPL-SRNSNHEMYWV 2751
>gi|307609404|emb|CBW98893.1| hypothetical protein LPW_06801 [Legionella pneumophila 130b]
Length = 304
Score = 36.3 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 9/161 (5%)
Query: 49 ARSAYKLLQ-INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R+ KL + + ++ + ++DLG+SPG W+ + G+ + +D M
Sbjct: 151 NRAYLKLWEALFLLNKYPRPGETVLDLGASPGGWT-YVMQSVGTQVTSVDKAELDTKIMA 209
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
+ V F K ++ + + + D VLSD+A + S
Sbjct: 210 -LPRVSFLKQS-----AFALDPEQLTESYDWVLSDVACYPDRAYTLIKKWIASKKARQLI 263
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
F +++ +K FQ + ++ L +V P
Sbjct: 264 FTIKLQGQTDLNTIKRFQSIPNSKVINLFYNK-HEVTFFYP 303
>gi|67906106|dbj|BAE00056.1| large protein [Human parainfluenza virus 2]
Length = 2263
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 187 GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAK---GFR 226
+ + LL F ++ ++ S S E++L+ + FR
Sbjct: 1960 SRFSQLASLLWCFFDRIHLIRSSYSDPHSHEVYLVCRLAADFR 2002
>gi|51246266|ref|YP_066150.1| hemolysin A [Desulfotalea psychrophila LSv54]
gi|50877303|emb|CAG37143.1| related to hemolysin A [Desulfotalea psychrophila LSv54]
Length = 242
Score = 36.3 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWS 82
V+ + + +R +KL Q I + + D+G+S G ++
Sbjct: 51 VRLRKKCPYVSRGGFKLEQALNYFSIDLAGKVCADIGASSGGFT 94
>gi|109390475|gb|ABG33779.1| 286 kDa polyprotein [Citrus leprosis virus C]
Length = 2512
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 26/208 (12%), Positives = 59/208 (28%), Gaps = 42/208 (20%)
Query: 58 INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPIL------- 110
I I ++ + L ++++A+ + +++ + + D+ I
Sbjct: 845 IASYFNIFNNSYKGPFLNVYELGFTEIASSLEIPSSSGNKFLITDVWLHHCIKALRVLDP 904
Query: 111 --------------------------GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMA 144
+F + F + + + +V+
Sbjct: 905 HSNVIVLRSSNTSRIPDRYGVCDFTMDSEFHEESFCLSTTLSNVLNLGIYSQCMVVFSDL 964
Query: 145 YPTIGHRKIDHLRTMSLCEAATFFA---LEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQ 201
RT + + L+ GG + + F+ + L L F+
Sbjct: 965 SRVPLKPFAPGFRTRTSVAERSNKILLAWSALSSGGTAVFRVFRPEEVPESLNTLTTLFE 1024
Query: 202 KVIHVKPVA---SRAESVEMFLLAKGFR 226
+ KP A S + +LL G R
Sbjct: 1025 DIRFFKPKAISTSIVD---GYLLCSGKR 1049
>gi|54293591|ref|YP_126006.1| hypothetical protein lpl0643 [Legionella pneumophila str. Lens]
gi|53753423|emb|CAH14876.1| hypothetical protein lpl0643 [Legionella pneumophila str. Lens]
Length = 304
Score = 36.3 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 9/161 (5%)
Query: 49 ARSAYKLLQ-INEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
R+ KL + + ++ + ++DLG+SPG W+ + G+ + +D M
Sbjct: 151 NRAYLKLWEALFLLNKYPRPGETVLDLGASPGGWT-YVMQSVGTQVTSVDKAELDTKIMA 209
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
+ V F K ++ + + + D VLSD+A + S
Sbjct: 210 -LPRVSFLKQS-----AFALDPEQLTESYDWVLSDVACYPDRAYTLIKKWIASKKARQLI 263
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
F +++ +K FQ + ++ L +V P
Sbjct: 264 FTIKLQGQTDLNTIKRFQSIPNSKVINLFYNK-HEVTFFYP 303
>gi|269123368|ref|YP_003305945.1| methyltransferase small [Streptobacillus moniliformis DSM 12112]
gi|268314694|gb|ACZ01068.1| methyltransferase small [Streptobacillus moniliformis DSM 12112]
Length = 237
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 48/161 (29%), Gaps = 9/161 (5%)
Query: 49 ARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQV-AARITGSNANNTRVVAIDILDME 107
R + KLL+I I+ R L G A I+ N N + I ++ +
Sbjct: 36 NRKSKKLLEIGSGFGIISMILRKRTLAEITGVEINYDAYNISLENLKNNNIDNIFFINED 95
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
+ KF D+ P D + +L
Sbjct: 96 ILNYRKFLSEQTYDIIV--------SNPPYFTHKDEKQLKKNINLRNARVESTLSIKEIL 147
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP 208
L L F+ ++I+ LLK +V VKP
Sbjct: 148 NISTYLLKNNASLYLIFRTERLSEIIELLKDSCLEVKRVKP 188
>gi|116629412|ref|YP_814584.1| rRNA methylase [Lactobacillus gasseri ATCC 33323]
gi|311110937|ref|ZP_07712334.1| hemolysin A [Lactobacillus gasseri MV-22]
gi|116094994|gb|ABJ60146.1| Predicted rRNA methylase [Lactobacillus gasseri ATCC 33323]
gi|311066091|gb|EFQ46431.1| hemolysin A [Lactobacillus gasseri MV-22]
Length = 270
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 43 QLEG--WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
+ +G + +R +KL + + I ++ +D+G+S G ++ VA + G+ V
Sbjct: 55 KDDGKKYVSRGGFKLEKALQVFNINLKDKICLDIGASTGGFTDVALQ-NGAKLVYALDVG 113
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ L + + G PD ++D+++
Sbjct: 114 YNQLAWKLRDN-PQVVVMEKQNFRYSKPADFTDGLPDFAMTDVSF 157
>gi|326390910|ref|ZP_08212461.1| Methyltransferase type 11 [Thermoanaerobacter ethanolicus JW 200]
gi|325993058|gb|EGD51499.1| Methyltransferase type 11 [Thermoanaerobacter ethanolicus JW 200]
Length = 199
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 61/187 (32%), Gaps = 12/187 (6%)
Query: 38 YVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTR 97
+ +Q+E +R K+L I ++H L + + +D+G G+ V +
Sbjct: 18 WFFNSQVEYYR-----KVLAILKEHIDLGNYIKFLDVGCGTGALCYVLREAGFEVSGVEV 72
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLR 157
+ M+ + + + + F ++ +
Sbjct: 73 SAGMLAQAMKRLKNTDIKAYKINPGEGFPFEDNFFDVVTASYVAHGIKKNEREILYKEMS 132
Query: 158 TMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN---DILCLLKKHFQKVIHVKPVASRAE 214
++ + + F+ G N ++ LK++F++V V S
Sbjct: 133 RVAKHYVILHDYNQNRDFFTSFVEWLEGGDYFNFVKEVKKELKENFKEVKMV--DVSSKA 190
Query: 215 SVEMFLL 221
S +++L
Sbjct: 191 S--LYIL 195
>gi|282850887|ref|ZP_06260261.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
gasseri 224-1]
gi|282557839|gb|EFB63427.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
gasseri 224-1]
Length = 270
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 43 QLEG--WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVA 100
+ +G + +R +KL + + I ++ +D+G+S G ++ VA + G+ V
Sbjct: 55 KDDGKKYVSRGGFKLEKALQVFNINLKDKICLDIGASTGGFTDVALQ-NGAKLVYALDVG 113
Query: 101 IDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ L + + G PD ++D+++
Sbjct: 114 YNQLAWKLRDN-PQVVVMEKQNFRYSKPADFTDGLPDFAMTDVSF 157
>gi|193216568|ref|YP_001999810.1| predicted 23S rRNA methylase [Mycoplasma arthritidis 158L3-1]
gi|193001891|gb|ACF07106.1| predicted 23S rRNA methylase [Mycoplasma arthritidis 158L3-1]
Length = 242
Score = 36.3 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 46/140 (32%), Gaps = 5/140 (3%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
+ + +R+A KLL SN+ +D+GSS G + QV
Sbjct: 54 RKNEYVSRAANKLLAAINNFDSTVSNKVCLDIGSSTGGFVQVLLEHGAKKVYAVDSGTNQ 113
Query: 103 ILDMEPI-LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
+ I V ++ L + E + + V D+++ ++ H + +S
Sbjct: 114 LNYQLRINPQVVVYEKTNLKHLTLEMFNE----PLEFVSCDVSFISLKHVFKVCEQLLSS 169
Query: 162 CEAATFFALEMLNIGGDFLV 181
+++
Sbjct: 170 KTQIMALIKPQFEASSKYVL 189
>gi|283458437|ref|YP_003363061.1| putative rRNA methylase [Rothia mucilaginosa DY-18]
gi|283134476|dbj|BAI65241.1| predicted rRNA methylase [Rothia mucilaginosa DY-18]
Length = 242
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 38 YVQRAQLEGWRARSAYKLLQINEKH-QILQSNRRIVDLGSSPGSWSQVAARI 88
YV++++L + +R+ +KL + I +R +D G+S G ++ V R
Sbjct: 49 YVRQSELTEYVSRAGHKLAGALDAFPDIEVEGKRCLDAGASTGGFTDVLLRR 100
>gi|22550316|ref|NP_689391.1| polyprotein [Montana myotis leukoencephalitis virus]
gi|22474436|emb|CAC82713.1| polyprotein [Montana myotis leukoencephalitis virus]
Length = 3374
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 17/180 (9%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDME 107
+R KL ++E+ +++ +VDLG G WS +A + + +
Sbjct: 2533 VSRGTSKLAWMHER-SLVRLEGCVVDLGCGRGGWSYYSAAQNPVRKVDAYTLGYGGHEKP 2591
Query: 108 PILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATF 167
+ V+ ++ + + + + D +L D+ + ++
Sbjct: 2592 RL--VETLGWNLITFKAKTDVFSLNPYSCDTILCDIGESNPSYAVE---AQRTIRVIDLM 2646
Query: 168 FALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK------VIHVKPVASRAESVEMFLL 221
+N +F K T ++L L FQ V SR + EM+ +
Sbjct: 2647 ERWLKVNPQANFCFKVLT-PYTGNVLERL-HSFQTRFGGGLVRV---PLSRNSTHEMYFV 2701
>gi|145224093|ref|YP_001134771.1| hemolysin A [Mycobacterium gilvum PYR-GCK]
gi|315444430|ref|YP_004077309.1| hemolysin A [Mycobacterium sp. Spyr1]
gi|145216579|gb|ABP45983.1| hemolysin A [Mycobacterium gilvum PYR-GCK]
gi|315262733|gb|ADT99474.1| hemolysin A [Mycobacterium sp. Spyr1]
Length = 268
Score = 36.3 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+ W +R A+KL+ + + + RR +D G+S G +++V + VVA+D+
Sbjct: 59 EDSWVSRGAHKLIGALDVFGLTVAGRRCLDAGASTGGFTEVLLSR-----DVREVVAVDV 113
Query: 104 LDMEPILGVKFFKFDFLDLDS--WEFIRQAIGGNPDLVLSDMAY 145
+ V+ + + + +AIGG DLV++D+++
Sbjct: 114 GYGQLAWSVRTDPRVTVMERTNVRDLTAEAIGGPVDLVVADLSF 157
>gi|242213456|ref|XP_002472556.1| predicted protein [Postia placenta Mad-698-R]
gi|220728350|gb|EED82246.1| predicted protein [Postia placenta Mad-698-R]
Length = 405
Score = 35.9 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 50/178 (28%), Gaps = 25/178 (14%)
Query: 69 RRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDL------ 122
RR +DLG +PG +SQ + + ++ + + F +
Sbjct: 114 RRFLDLGCAPGGFSQWLLQHNRDVYGVGVTLPVEEAGIPLQIDSAFLANFRVCYDDLIRL 173
Query: 123 ---------DSWEFIRQAIGGNPDLVLSDMAY--PTIGHRKIDHLRTMSLCEAATFFALE 171
+ DLV++ +S
Sbjct: 174 ATASMESGVPVQIHLPDDHHEPYDLVIAGAYLVLQRQKPWWQRMQMVLSQTLIIISNIAA 233
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKP---VASRAESVEMFLLAKGFR 226
K F D++ +L++ F+ V K A R +L+ +GFR
Sbjct: 234 DGTAVVSISTKLFL--WIVDLIGMLRQCFKTVTAHKTGRLHAVRTS---CYLICRGFR 286
>gi|313231253|emb|CBY08368.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 35.9 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 6/119 (5%)
Query: 87 RITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYP 146
N + V+ D+ + G + D + ++ + I+ DLV+SD
Sbjct: 84 EKENKNESGGSCVSCDLRPFRHVNGARQVIGDIFEKETLDQIQNEQR-EFDLVVSDAHPG 142
Query: 147 TIGHRKIDHLRTMSLCEAATFFALEML-NIGGDFLVKTFQGGTTNDILCLLKKHFQKVI 204
K + L + L L + GG FL K + ++ L+K+HFQ V
Sbjct: 143 ASQDPKQTIYSSTQLSQRIIEDVLPQLLSPGGAFLTKAL----SQKLVSLMKQHFQHVS 197
>gi|81961759|sp|Q91DD4|L_EBORE RecName: Full=RNA-directed RNA polymerase L; Short=Protein L;
AltName: Full=Large structural protein; AltName:
Full=Replicase; AltName: Full=Transcriptase; Includes:
RecName: Full=RNA-directed RNA polymerase; Includes:
RecName: Full=mRNA (guanine-N(7)-)-methyltransferase;
Includes: RecName: Full=mRNA guanylyltransferase
gi|15823616|dbj|BAB69010.1| polymerase [Reston ebolavirus - Reston]
Length = 2212
Score = 35.9 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 57/195 (29%), Gaps = 20/195 (10%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVD----------------LGSSPGSWSQVAARIT 89
G + YKL ++ ++ S + + L ++ +
Sbjct: 1806 GIVSSMHYKLDEVLLEYNSFDSAITLAEGEGSGALLLLQKYSTRLLFLNTLATEHSIESE 1865
Query: 90 GSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIG 149
+ +T + + I+ V + + + + + T+
Sbjct: 1866 VVSGFSTPRMLLPIMQKVHEGQVTVILNNSASQITDITSSMWLSNQKYNLPCQVEIITMD 1925
Query: 150 HRKIDHLRTMSLCEAATFFALEMLNIG--GDFLVKTF--QGGTTNDILCLLKKHFQKVIH 205
++L L A L+ ++ ++K F I L F
Sbjct: 1926 AETTENLNRSQLYRAVYNLILDHIDPQYLKVVVLKVFLSDIEGILWINDYLAPLFGAGYL 1985
Query: 206 VKPVASRAESVEMFL 220
+KP+ S A S E +L
Sbjct: 1986 IKPITSSARSSEWYL 2000
>gi|21311777|gb|AAM46848.1|AF498259_1 surface antigen LsaA [Lawsonia intracellularis]
Length = 233
Score = 35.9 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 3/140 (2%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
Q + + +R AYKLL E ++ N+ I+D+G+S G +SQV+ G+ V +
Sbjct: 50 QKKEFVSRGAYKLLAAIEAFKLDFENKVILDIGASTGGFSQVSLNY-GAKLVYALDVGNN 108
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
LD + K + +L S D V+ D+++ ++ +
Sbjct: 109 QLDYKLRQNSKIKSLEQTNLKSISKQM--FEVEIDKVVCDVSFISLKEVYKVVEHILKTN 166
Query: 163 EAATFFALEMLNIGGDFLVK 182
+ ++ K
Sbjct: 167 DDWIVLLKPQFEASSKYVEK 186
>gi|261415471|ref|YP_003249154.1| conserved hypothetical ATPase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371927|gb|ACX74672.1| conserved hypothetical ATPase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327015|gb|ADL26216.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 428
Score = 35.9 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 189 TNDILCLLKKHFQKVIHVKPVASRAESVEM-FLLAK 223
++L K F V + KP + +S E+ F++ +
Sbjct: 324 YIELLRRAAKEFDDVYYYKPSS---QSKEVDFVVCR 356
>gi|58337601|ref|YP_194186.1| hemolysin-like protein [Lactobacillus acidophilus NCFM]
gi|227904241|ref|ZP_04022046.1| hemolysin A [Lactobacillus acidophilus ATCC 4796]
gi|58254918|gb|AAV43155.1| hemolysin-like protein [Lactobacillus acidophilus NCFM]
gi|227867889|gb|EEJ75310.1| hemolysin A [Lactobacillus acidophilus ATCC 4796]
Length = 270
Score = 35.9 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 37 PYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNT 96
+ + + + +R +KL + + I ++ +D+G+S G ++ VA + G+
Sbjct: 51 KFYVKDDGKKYVSRGGFKLEKALKVFNINLKDKICLDIGASTGGFTDVALQ-NGAKMVYA 109
Query: 97 RVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
V + L + + + + + G PD ++D+++
Sbjct: 110 LDVGYNQLAWQLRDDPRVVVMEKQNFR-YSKPEDFDQGLPDFAMTDVSF 157
>gi|221481830|gb|EEE20200.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 1028
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPV 209
L T L + A ++L GG F+ F T +L L F++V VKP
Sbjct: 79 NYQELLTGRLLLSEFLIAFQLLQHGGTFICTVFDSFTSFTASLLFLCIALFEEVYIVKP- 137
Query: 210 ASRAE--SVE 217
SR + E
Sbjct: 138 -SRNRWTNSE 146
>gi|237843343|ref|XP_002370969.1| hypothetical protein TGME49_016610 [Toxoplasma gondii ME49]
gi|211968633|gb|EEB03829.1| hypothetical protein TGME49_016610 [Toxoplasma gondii ME49]
gi|221502329|gb|EEE28062.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 1028
Score = 35.9 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPV 209
L T L + A ++L GG F+ F T +L L F++V VKP
Sbjct: 79 NYQELLTGRLLLSEFLIAFQLLQHGGTFICTVFDSFTSFTASLLFLCIALFEEVYIVKP- 137
Query: 210 ASRAE--SVE 217
SR + E
Sbjct: 138 -SRNRWTNSE 146
>gi|56800305|gb|AAW30973.1| polyprotein [Dengue virus 4]
Length = 3387
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 13/183 (7%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAI 101
++ + +R + K+ I E+ +++ ++VDLG G WS A +
Sbjct: 2536 SKTKHAVSRGSSKIRWIVER-GMIKPKGKVVDLGCGRGGWSYYMATLKNVTEVKG-YTKG 2593
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
EPI + ++ + L S + D +L D+ + +
Sbjct: 2594 GPGHEEPIPMAT-YGWNLVKLHSGVDVFYKPTEQVDTLLCDIGESSSNPTIEEG-----R 2647
Query: 162 CEAATFFALEMLNIGGDFLVKT---FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
L+ +F +K + ++ L ++H ++ SR + EM
Sbjct: 2648 TLRVLKMVEPWLSSKPEFCIKVLNPYMPTVIEELEKLQRRHGGSLVRC--PLSRNSTHEM 2705
Query: 219 FLL 221
+ +
Sbjct: 2706 YWV 2708
>gi|53653753|gb|AAU89380.1| polyprotein [Dengue virus 4]
Length = 3387
Score = 35.9 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 13/183 (7%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAI 101
++ + +R + K+ I E+ +++ ++VDLG G WS A +
Sbjct: 2536 SKTKHAVSRGSSKIRWIVER-GMIKPKGKVVDLGCGRGGWSYYMATLKNVTEVKG-YTKG 2593
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
EPI + ++ + L S + D +L D+ + +
Sbjct: 2594 GPGHEEPIPMAT-YGWNLVKLHSGVDVFYKPTEQVDTLLCDIGESSSNPTIEEG-----R 2647
Query: 162 CEAATFFALEMLNIGGDFLVKT---FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
L+ +F +K + ++ L ++H ++ SR + EM
Sbjct: 2648 TLRVLKMVEPWLSSKPEFCIKVLNPYMPTVIEELEKLQRRHGGSLVRC--PLSRNSTHEM 2705
Query: 219 FLL 221
+ +
Sbjct: 2706 YWV 2708
>gi|294101847|ref|YP_003553705.1| hemolysin A [Aminobacterium colombiense DSM 12261]
gi|293616827|gb|ADE56981.1| hemolysin A [Aminobacterium colombiense DSM 12261]
Length = 271
Score = 35.9 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
W +R AYKLL+ E + + +DLG+S G ++ V G+ V L
Sbjct: 63 WVSRGAYKLLRALEVFSVDPKGKVCMDLGASTGGFTDVLLAR-GARRVYAVDVGYGQLAW 121
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ + + + + R+ D+V D ++
Sbjct: 122 KLRNDSRVVVMERTN--ARYLQREHFDEPLDMVTIDASF 158
>gi|300023486|ref|YP_003756097.1| hemolysin A [Hyphomicrobium denitrificans ATCC 51888]
gi|299525307|gb|ADJ23776.1| hemolysin A [Hyphomicrobium denitrificans ATCC 51888]
Length = 259
Score = 35.9 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Query: 46 GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD 105
G+ +R A KL ++ + +D+G+S G ++QV +V A+D+
Sbjct: 72 GYVSRGAEKLAAALDQFGFDVTGVVALDVGASTGGFTQVLLER-----GAAQVFAVDVGS 126
Query: 106 MEPILGVKFFKFDFLDLDSWE--FIRQAIGGNPDLVLSDMAY 145
+ VK + R+ + V+ D+++
Sbjct: 127 AQLHDDVKSDARVVSLENCDARTLTREHVPAPVGAVVIDVSF 168
>gi|307266302|ref|ZP_07547842.1| Methyltransferase type 11 [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918680|gb|EFN48914.1| Methyltransferase type 11 [Thermoanaerobacter wiegelii Rt8.B1]
Length = 199
Score = 35.9 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 25/187 (13%), Positives = 62/187 (33%), Gaps = 12/187 (6%)
Query: 38 YVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTR 97
+ +Q+E +R K+L I ++H L + + +D+G G+ V +
Sbjct: 18 WFFNSQVEYYR-----KVLAILKEHIDLGNYIKFLDVGCGTGALCYVLREAGFEVSGVEV 72
Query: 98 VVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLR 157
+ M+ + + + + + F ++ +
Sbjct: 73 SAGMLAQAMKRLKNMDIKTYKINPGEGFPFEDNFFDVVTASYVAHGIKKNEREILYKEMS 132
Query: 158 TMSLCEAATFFALEMLNIGGDFLVKTFQGGTTN---DILCLLKKHFQKVIHVKPVASRAE 214
++ + + F+ G N ++ LK++F++V V S
Sbjct: 133 RVAKHYVILHDYNQNRDFFTSFVEWLEGGDYFNFVKEVKKELKENFKEVKMV--DVSSKA 190
Query: 215 SVEMFLL 221
S +++L
Sbjct: 191 S--LYIL 195
>gi|259501559|ref|ZP_05744461.1| hemolysin A [Lactobacillus iners DSM 13335]
gi|302191467|ref|ZP_07267721.1| rRNA methylase [Lactobacillus iners AB-1]
gi|312874470|ref|ZP_07734500.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LEAF 2052A-d]
gi|259167077|gb|EEW51572.1| hemolysin A [Lactobacillus iners DSM 13335]
gi|311090082|gb|EFQ48496.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LEAF 2052A-d]
Length = 270
Score = 35.5 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
IN+ + + + +R YKL + I +++ +D+G+S G ++ VA +
Sbjct: 48 INEVFYVKKDSRKYVSRGGYKLEKALNVFNIDLTDKVCLDIGASTGGFTDVALQ 101
>gi|147920272|ref|YP_685958.1| Fe(II) import system, GTP-binding protein B [uncultured
methanogenic archaeon RC-I]
gi|110621354|emb|CAJ36632.1| Fe(II) import system, GTP-binding protein B [uncultured
methanogenic archaeon RC-I]
Length = 635
Score = 35.5 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 38 YVQRAQLE--GWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
YV A LE G+ R+A+ L +I + ++ + LG + ++ +
Sbjct: 350 YVLMALLENSGYLTRAAFLLDEIMHRFKLHGRAMIPMILGFGCSVPAIMSTK 401
>gi|309804215|ref|ZP_07698292.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LactinV 11V1-d]
gi|309808809|ref|ZP_07702694.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LactinV 01V1-a]
gi|312871885|ref|ZP_07731969.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LEAF 3008A-a]
gi|312872410|ref|ZP_07732479.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LEAF 2062A-h1]
gi|312874517|ref|ZP_07734542.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LEAF 2053A-b]
gi|315653404|ref|ZP_07906326.1| hemolysin A [Lactobacillus iners ATCC 55195]
gi|325911821|ref|ZP_08174225.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners UPII 143-D]
gi|325913458|ref|ZP_08175824.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners UPII 60-B]
gi|329919862|ref|ZP_08276800.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners SPIN 1401G]
gi|308163618|gb|EFO65888.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LactinV 11V1-d]
gi|308167935|gb|EFO70068.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LactinV 01V1-a]
gi|311089908|gb|EFQ48327.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LEAF 2053A-b]
gi|311091992|gb|EFQ50367.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LEAF 2062A-h1]
gi|311092607|gb|EFQ50967.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LEAF 3008A-a]
gi|315489329|gb|EFU78969.1| hemolysin A [Lactobacillus iners ATCC 55195]
gi|325476327|gb|EGC79489.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners UPII 143-D]
gi|325477227|gb|EGC80373.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners UPII 60-B]
gi|328936952|gb|EGG33382.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners SPIN 1401G]
Length = 270
Score = 35.5 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
IN+ + + + +R YKL + I +++ +D+G+S G ++ VA +
Sbjct: 48 INEVFYVKKDSRKYVSRGGYKLEKALNVFNIDLTDKVCLDIGASTGGFTDVALQ 101
>gi|219683739|ref|YP_002470122.1| hemolysin-like protein [Bifidobacterium animalis subsp. lactis
AD011]
gi|219621389|gb|ACL29546.1| hemolysin-like protein with S4 domain found in bacteria and plants
[Bifidobacterium animalis subsp. lactis AD011]
Length = 259
Score = 35.5 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 38/151 (25%), Gaps = 25/151 (16%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQS-------NRRIVDLGSSPGSWSQVAARITGS 91
V A + + +R A KLL + +D+G+S G + V R G+
Sbjct: 59 VHMAMEDDYVSRGALKLL---GAFNAFAPAGFTSVEGKHCLDIGASTGGFCDVLLRR-GA 114
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
V LD + + ++ V D
Sbjct: 115 AQVIALDVGHGQLDPRIADDPRVIEMSGVN--------------MRYVGVDDLPYRPDVI 160
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
D A + LVK
Sbjct: 161 VSDVSFISLTYLMAAIAEVAAPAAQIVLLVK 191
>gi|183601729|ref|ZP_02963099.1| possible rRNA methyltransferase [Bifidobacterium animalis subsp.
lactis HN019]
gi|183219335|gb|EDT89976.1| possible rRNA methyltransferase [Bifidobacterium animalis subsp.
lactis HN019]
gi|289178509|gb|ADC85755.1| Putative cell adhesion protein (contact hemolysin TlyA-related)
[Bifidobacterium animalis subsp. lactis BB-12]
Length = 262
Score = 35.5 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 38/151 (25%), Gaps = 25/151 (16%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQS-------NRRIVDLGSSPGSWSQVAARITGS 91
V A + + +R A KLL + +D+G+S G + V R G+
Sbjct: 62 VHMAMEDDYVSRGALKLL---GAFNAFAPAGFTSVEGKHCLDIGASTGGFCDVLLRR-GA 117
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
V LD + + ++ V D
Sbjct: 118 AQVIALDVGHGQLDPRIADDPRVIEMSGVN--------------MRYVGVDDLPYRPDVI 163
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
D A + LVK
Sbjct: 164 VSDVSFISLTYLMAAIAEVAAPAAQIVLLVK 194
>gi|187918372|ref|YP_001883935.1| putative cell adhesion protein [Borrelia hermsii DAH]
gi|119861220|gb|AAX17015.1| putative cell adhesion protein [Borrelia hermsii DAH]
Length = 263
Score = 35.5 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 58/162 (35%), Gaps = 9/162 (5%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAID 102
+ + +R +KL + E +I ++ +D+G+S G ++ + V
Sbjct: 59 KSRQFVSRGGFKLFESLETFKITLKDKICIDVGASTGGFTDCLLQEGAKLVYAVDVGFNQ 118
Query: 103 ILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLC 162
+ + + + F Q P+L + D+++ ++ D + +S
Sbjct: 119 LSYKLRVD-----PRVRVFEKTNIFDIQQFDMQPNLAVIDVSFRSVVSICADLIDRLSDR 173
Query: 163 EAATFFALEMLNIGGDFLVKTFQG----GTTNDILCLLKKHF 200
+ G D +K F G ++IL + + F
Sbjct: 174 LIVALVKPQFELKGLDLDIKDFNGVVENRYLSEILEKVIRKF 215
>gi|332298733|ref|YP_004440655.1| hypothetical protein Trebr_2109 [Treponema brennaborense DSM 12168]
gi|332181836|gb|AEE17524.1| hypothetical protein Trebr_2109 [Treponema brennaborense DSM 12168]
Length = 346
Score = 35.5 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 46/141 (32%), Gaps = 13/141 (9%)
Query: 49 ARSAYKLLQINEK----HQILQS-NRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI 103
+R+ KL + +L R D G+ PG W+ V ++ + R
Sbjct: 180 SRAYLKLQEALTHVYSRFGVLPGEGSRCFDAGACPGGWTWVLRQLGCTVLAVDRAELAPK 239
Query: 104 LDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCE 163
L +P+ V F K D L E G D V SD+ + S
Sbjct: 240 LMADPL--VTFQKHDAFTLPPQEI------GPFDWVCSDVICYPERLLEWVGKWLDSGMC 291
Query: 164 AATFFALEMLNIGGDFLVKTF 184
++M +V+ F
Sbjct: 292 RNMICTIKMQGAIDWRVVERF 312
>gi|146411795|gb|ABI54483.1| polyprotein [Potiskum virus]
Length = 3390
Score = 35.5 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 22/182 (12%)
Query: 48 RARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVA-ARITGSNANNTRVVAIDILDM 106
+R + KL + E+ L+ + R+VDLG G WS A S+ +
Sbjct: 2541 VSRGSAKLNWMMER-GYLRPHGRVVDLGCGRGGWSYACSAERLVSSVKGFTLGKAGHETP 2599
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
I + L + +F + G + SD IG +
Sbjct: 2600 RLI--------ESLGWNIIKFKDKCDVGRMQPIASDTLLCDIGESSSNPEIEKERTLKVI 2651
Query: 167 FFALEMLNIGG-DFLVKTFQGGTTNDILCLLKKHFQ------KVIHVKPVASRAESVEMF 219
++ F K +++ L+ FQ V + SR + EM+
Sbjct: 2652 EIVRNWMSPTTSSFCFKVLA-PYKPEVIEALES-FQLSYGGGLVRN---PLSRNSTHEMY 2706
Query: 220 LL 221
+
Sbjct: 2707 FV 2708
>gi|83945407|ref|ZP_00957755.1| hemolysin A [Oceanicaulis alexandrii HTCC2633]
gi|83851241|gb|EAP89098.1| hemolysin A [Oceanicaulis alexandrii HTCC2633]
Length = 245
Score = 35.5 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R+A KL++ + + + +R +D+GSS G +++V + V +
Sbjct: 56 YVSRAALKLVKGLDAFGVDPAGKRCLDIGSSTGGFTEVLLERGAARVVAVDVGRDQLAPA 115
Query: 107 -EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLS 141
V + + E I A G S
Sbjct: 116 LRAHPQVLSLEGTDARNLTRELIEDAAPGLLVCDAS 151
>gi|260654973|ref|ZP_05860461.1| hemolysin A [Jonquetella anthropi E3_33 E1]
gi|260630288|gb|EEX48482.1| hemolysin A [Jonquetella anthropi E3_33 E1]
Length = 269
Score = 35.5 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 1/88 (1%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-VAI 101
Q W +R AYKLL + I + +D+G+S G ++ V S V
Sbjct: 60 QSSQWVSRGAYKLLTALDAFNIDLTGAVCLDVGASTGGFTHVMLTRGASRVYALDVGYGQ 119
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIR 129
+ V E+
Sbjct: 120 LAWSLRQDQRVTVMDRRNAREMVPEWFE 147
>gi|241190773|ref|YP_002968167.1| hemolysin-like protein [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196179|ref|YP_002969734.1| hemolysin-like protein [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|240249165|gb|ACS46105.1| hemolysin-like protein [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240250733|gb|ACS47672.1| hemolysin-like protein [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|295793762|gb|ADG33297.1| hemolysin-like protein [Bifidobacterium animalis subsp. lactis V9]
Length = 252
Score = 35.5 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 38/151 (25%), Gaps = 25/151 (16%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQS-------NRRIVDLGSSPGSWSQVAARITGS 91
V A + + +R A KLL + +D+G+S G + V R G+
Sbjct: 52 VHMAMEDDYVSRGALKLL---GAFNAFAPAGFTSVEGKHCLDIGASTGGFCDVLLRR-GA 107
Query: 92 NANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHR 151
V LD + + ++ V D
Sbjct: 108 AQVIALDVGHGQLDPRIADDPRVIEMSGVN--------------MRYVGVDDLPYRPDVI 153
Query: 152 KIDHLRTMSLCEAATFFALEMLNIGGDFLVK 182
D A + LVK
Sbjct: 154 VSDVSFISLTYLMAAIAEVAAPAAQIVLLVK 184
>gi|304321305|ref|YP_003854948.1| Hemolysin HlyA [Parvularcula bermudensis HTCC2503]
gi|303300207|gb|ADM09806.1| Hemolysin HlyA [Parvularcula bermudensis HTCC2503]
Length = 243
Score = 35.5 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAA 86
+ +R+A+KLL E + +D+G+S G ++QV
Sbjct: 57 YVSRAAFKLLAALEAFSFDPQDLLCLDIGASTGGFTQVLC 96
>gi|309805478|ref|ZP_07699523.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LactinV 09V1-c]
gi|308165129|gb|EFO67367.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LactinV 09V1-c]
Length = 278
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 29/54 (53%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
IN+ + + + + +R YKL + I +++ +D+G+S G ++ VA +
Sbjct: 56 INEVFYVKNDNKKYVSRGGYKLEKALNVFNIDLTDKVCLDIGASTGGFTDVALQ 109
>gi|110633093|ref|YP_673301.1| hemolysin A [Mesorhizobium sp. BNC1]
gi|110284077|gb|ABG62136.1| hemolysin A [Chelativorans sp. BNC1]
Length = 252
Score = 35.5 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+ +R+A KL+ + + +D+GSS G ++QV
Sbjct: 66 YVSRAALKLVHGLDAFGLDPHGALALDIGSSTGGFTQVLLER 107
>gi|255326173|ref|ZP_05367259.1| ribosomal RNA large subunit methyltransferase J [Rothia
mucilaginosa ATCC 25296]
gi|255296627|gb|EET75958.1| ribosomal RNA large subunit methyltransferase J [Rothia
mucilaginosa ATCC 25296]
Length = 242
Score = 35.5 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 38 YVQRAQLEGWRARSAYKLLQINEKHQILQ-SNRRIVDLGSSPGSWSQVAARI 88
YV++++L + +R+ +KL + ++ +R +D G+S G ++ V R
Sbjct: 49 YVRQSELTEYVSRAGHKLAGALDAFPEIEVEGKRCLDAGASTGGFTDVLLRR 100
>gi|15644324|ref|NP_229376.1| hemolysin [Thermotoga maritima MSB8]
gi|148270346|ref|YP_001244806.1| hemolysin A [Thermotoga petrophila RKU-1]
gi|170289028|ref|YP_001739266.1| hemolysin A [Thermotoga sp. RQ2]
gi|281412652|ref|YP_003346731.1| hemolysin A [Thermotoga naphthophila RKU-10]
gi|4982145|gb|AAD36643.1|AE001802_12 hemolysin [Thermotoga maritima MSB8]
gi|147735890|gb|ABQ47230.1| hemolysin A [Thermotoga petrophila RKU-1]
gi|170176531|gb|ACB09583.1| hemolysin A [Thermotoga sp. RQ2]
gi|281373755|gb|ADA67317.1| hemolysin A [Thermotoga naphthophila RKU-10]
Length = 267
Score = 35.5 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 3/147 (2%)
Query: 36 DPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANN 95
D V+ + + +R YKL E +I S + D+G+S G ++ + G+
Sbjct: 49 DANVELLEEPKYVSRGGYKLESAFESFKIDVSGKVACDIGASTGGFTDFLLQR-GAKKVY 107
Query: 96 TRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH 155
V L + + + ++ + +G D+V D+++ ++
Sbjct: 108 AVDVGYGQLHWKLRNDPRVVVMEKVN--ARYLNPDDLGEKVDVVTCDVSFISLKKIIPAI 165
Query: 156 LRTMSLCEAATFFALEMLNIGGDFLVK 182
R + A F+ K
Sbjct: 166 SRILKNIGDAVLLVKPQFEAPRKFVKK 192
>gi|57544912|gb|AAW51421.1| polyprotein [Dengue virus 4]
Length = 3383
Score = 35.5 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 65/183 (35%), Gaps = 13/183 (7%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAI 101
++++ +R + K+ I E+ +++ ++VDLG G WS A +
Sbjct: 2532 SKIKHAVSRGSSKIRWIVER-GMIKPKGKVVDLGCGRGGWSYYMATLKNVTEVKG-YTKG 2589
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
EPI + ++ + L S + D +L D+ + +
Sbjct: 2590 GPGHEEPIPMAT-YGWNLVKLHSGVDVFYKPTEQVDTLLCDIGESSSNPTIEEG-----R 2643
Query: 162 CEAATFFALEMLNIGGDFLVKT---FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
L+ +F +K + ++ L ++H ++ SR + EM
Sbjct: 2644 TLRVLKMVEPWLSSKPEFCIKVLNPYMPTVIEELEKLQRRHGGSLVRC--PLSRNSTHEM 2701
Query: 219 FLL 221
+ +
Sbjct: 2702 YWV 2704
>gi|20090852|ref|NP_616927.1| FtsJ-like methyltransferase [Methanosarcina acetivorans C2A]
gi|19915923|gb|AAM05407.1| FtsJ-like methyltransferase [Methanosarcina acetivorans C2A]
Length = 226
Score = 35.5 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARIT 89
Q +G+ +KL I E+ ++L+ R++DLGSS G + A+ I
Sbjct: 56 QPQGY-----FKLRFIQEESEVLKPGDRVLDLGSSAGGFLLFASEIV 97
>gi|282163383|ref|YP_003355768.1| hypothetical protein MCP_0713 [Methanocella paludicola SANAE]
gi|282155697|dbj|BAI60785.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 215
Score = 35.5 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 66/171 (38%), Gaps = 16/171 (9%)
Query: 52 AYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILG 111
+KL I E IL+ ++D+GSS G + A+ I ++ + + L+ +
Sbjct: 59 YFKLKGIQEASGILRPGDVVLDIGSSAGGFLMFASGI--ASRVVGIEFSREFLEPLSNVE 116
Query: 112 VKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALE 171
++ + D++ A+GG D++L+DM + ++ L E +
Sbjct: 117 KEYPGVKVMFGDAFRMDLAALGGPYDVILNDMTVEPLTSIEVLKRFLPLLKEHGRIVQVV 176
Query: 172 MLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
L +G I L + + + R + +E +++A
Sbjct: 177 KLGP---------RGTPEPMIKKLAEAGLKIQKVI-----RPQKMEAYIVA 213
>gi|21226172|ref|NP_632094.1| putative ribosomal RNA methyltransferase [Methanosarcina mazei Go1]
gi|20904401|gb|AAM29766.1| putative ribosomal RNA methyltransferase [Methanosarcina mazei Go1]
Length = 243
Score = 35.5 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
Query: 43 QLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITG--SNANNTRVVA 100
Q +G+ +KL + E+ +L+ R++DLGSS G + A+ I +R
Sbjct: 69 QPQGY-----FKLKYVQEESGVLKPGDRVLDLGSSAGGFLLFASEIADHVKGIEFSRDFR 123
Query: 101 ID-ILDMEPILGVKFFKFDFLDLDSWEFIRQ 130
+ V+ D + E +
Sbjct: 124 SELGKIAYERENVEIIFGDVFTIPLKELSEE 154
>gi|209882443|ref|XP_002142658.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209558264|gb|EEA08309.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 559
Score = 35.5 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 53/201 (26%), Gaps = 26/201 (12%)
Query: 28 DWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKH---------------QILQSNRRIV 72
WL H D Y + + S YK+ +I +I++++ + +
Sbjct: 307 RWLEDHCEDLYSILLHHYKYVSIS-YKIGEIMRDLSSLLGIVQSPEIKDKKIIKTSLKFI 365
Query: 73 DLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAI 132
L + I +N R++ + + I S + I
Sbjct: 366 PLNIFRNKAFYILKSIIYNNQIFYRLIKLSGSNCFDIASDSISTLRCYLFISPHLTNEFI 425
Query: 133 GGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDF-----LVKTFQGG 187
N D S I R EM I F +K F
Sbjct: 426 TTNQDKFFSYYFGYLIQSPDYVPKRQGLRLLNQLLSVPEMSKIMTKFASNYKYLKVFM-- 483
Query: 188 TTNDILCLLKK-HFQKVIHVK 207
++ L F+ K
Sbjct: 484 --ILLISKLSSISFESFHLFK 502
>gi|77124348|ref|YP_338085.1| large protein [J-virus]
gi|62546315|gb|AAX86035.1| large protein [J-virus]
Length = 2204
Score = 35.5 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 146 PTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKT--FQGGTTNDILCLLKKHFQKV 203
T + ++ + AL + + ++VK ++ ++ L +++ V
Sbjct: 1899 DTESSLEKTPEVILNEQIHSLCLALNLGDNNSIYVVKLAPRDNDYSSTLISLFYQYYSNV 1958
Query: 204 IHVKPVASRAESVEMFLLAKGFR 226
I + P S S E +++ +
Sbjct: 1959 ICLLPSYSNPASPECYIICTEKK 1981
>gi|47458915|ref|YP_015777.1| putative rRNA methylase [Mycoplasma mobile 163K]
gi|47458243|gb|AAT27566.1| putative rRNA methylase [Mycoplasma mobile 163K]
Length = 241
Score = 35.5 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 44 LEGWRARSAYKLLQINEKHQILQ--SNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAI 101
+ + +R AYKLL E+ + + N+ ++D+GSS G + +V + G+ V
Sbjct: 54 KKEYVSRGAYKLLDAIEEFNLKKEIKNKIVLDIGSSTGGFIEVLLKY-GAEKVFALDVGT 112
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ LD + K + +L + + +LV D+++
Sbjct: 113 NQLDYSLRINPKVISKENTNL--KQISKNLFSEKIELVTCDVSF 154
>gi|294793651|ref|ZP_06758788.1| primosomal protein N' [Veillonella sp. 3_1_44]
gi|294455221|gb|EFG23593.1| primosomal protein N' [Veillonella sp. 3_1_44]
Length = 727
Score = 35.5 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 42/164 (25%), Gaps = 21/164 (12%)
Query: 51 SAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPIL 110
S YK Q ++ +L+ RI + + + I + I
Sbjct: 365 SYYKAKQ--GEYHLLELPNRIFEQSMPKVTIVDMKEEIL-----HGNYSVFSDAMSRLIQ 417
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDH-LRTMSLCEAATFFA 169
LD + I G V+ TI D + E
Sbjct: 418 -------HTLDEHNQMIILLNRRGYNTFVMCRDCGETIMCPHCDVAMVYHQAGEELRCHY 470
Query: 170 LEMLNIGGDFLVKT------FQGGTTNDILCLLKKHFQKVIHVK 207
E K F G T + L++HF+ +
Sbjct: 471 CEHHEPIPTVCPKCNSKRIKFFGSGTQKVEEELRRHFKSARIAR 514
>gi|219685232|ref|ZP_03540052.1| ribosomal RNA large subunit methyltransferase J [Borrelia garinii
Far04]
gi|219673328|gb|EED30347.1| ribosomal RNA large subunit methyltransferase J [Borrelia garinii
Far04]
Length = 263
Score = 35.5 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 58/162 (35%), Gaps = 6/162 (3%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R YKLL+ + +I N+ VD+GSS G ++ + + + V +
Sbjct: 63 FVSRGGYKLLEALKDFKIEVKNKICVDVGSSTGGFTDCLLQCGANFVYSVDVGTNQLSYK 122
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
I + + F P+ + D+++ + ++ + +S
Sbjct: 123 LRID-----PRVKVLERTNIFDVTEFKIVPNFAVVDVSFRSSISICVNLIDKLSDNFIIV 177
Query: 167 FFALEMLNIGGDFLVKTFQG-GTTNDILCLLKKHFQKVIHVK 207
+ + +K F G + + +L+ +K K
Sbjct: 178 LIKPQFEVKNLNLDIKNFNGVVNADYLKTILQSVIEKFYKNK 219
>gi|215430586|ref|ZP_03428505.1| cytotoxin|haemolysin tlyA [Mycobacterium tuberculosis EAS054]
gi|289753783|ref|ZP_06513161.1| cytotoxin/hemolysin tlyA [Mycobacterium tuberculosis EAS054]
gi|289694370|gb|EFD61799.1| cytotoxin/hemolysin tlyA [Mycobacterium tuberculosis EAS054]
Length = 135
Score = 35.5 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV 98
W +R A+KL+ E I RR +D G+S +++V V
Sbjct: 59 ERAWVSRGAHKLVGALEAFAIAVGGRRCLDAGASTVGFTEVLRDRGPPTGGPADV 113
>gi|57544910|gb|AAW51420.1| polyprotein [Dengue virus 4]
Length = 3249
Score = 35.5 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 65/183 (35%), Gaps = 13/183 (7%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAI 101
++++ +R + K+ I E+ +++ ++VDLG G WS A +
Sbjct: 2398 SKIKHAVSRGSSKIRWIVER-GMIKPKGKVVDLGCGRGGWSYYMATLKNVTEVKG-YTKG 2455
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
EPI + ++ + L S + D +L D+ + +
Sbjct: 2456 GPGHEEPIPMAT-YGWNLVKLHSGVDVFYKPTEQVDTLLCDIGESSSNPTIEEG-----R 2509
Query: 162 CEAATFFALEMLNIGGDFLVKT---FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
L+ +F +K + ++ L +++ ++ SR + EM
Sbjct: 2510 TLRVLKMVEPWLSSKPEFCIKVLNPYMPTVIEELEKLQRRYGGSLVRC--PLSRNSTHEM 2567
Query: 219 FLL 221
+ +
Sbjct: 2568 YWV 2570
>gi|309806896|ref|ZP_07700882.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LactinV 03V1-b]
gi|308166714|gb|EFO68907.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners LactinV 03V1-b]
Length = 192
Score = 35.1 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
IN+ + + + +R YKL + I +++ +D+G+S G ++ VA +
Sbjct: 48 INEVFYVKKDSRKYVSRGGYKLEKALNVFNIDLTDKVCLDIGASTGGFTDVALQ 101
>gi|183219509|ref|YP_001837505.1| putative ribosomal RNA methyltransferase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189909651|ref|YP_001961206.1| rRNA methylase/hemolysin-tylA [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|106879730|emb|CAJ90434.1| putative ribosomal RNA methyltransferase [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|167774327|gb|ABZ92628.1| rRNA methylase/Hemolysin-tylA [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167777931|gb|ABZ96229.1| Putative ribosomal RNA methyltransferase, putative hemolysine
TlyA-like protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 257
Score = 35.1 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQ-SNRRIVDLGSSPGSWSQVAARI 88
D + +++ + +R AYKLL ++ + +Q + +DLG+S G + QV
Sbjct: 50 KDKVRTKEKIKTYVSRGAYKLLGAFDRWKTIQVEGKTCIDLGASTGGFCQVLLEK 104
>gi|325962895|ref|YP_004240801.1| hemolysin A [Arthrobacter phenanthrenivorans Sphe3]
gi|323468982|gb|ADX72667.1| hemolysin A [Arthrobacter phenanthrenivorans Sphe3]
Length = 271
Score = 35.1 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 35 NDPYVQRAQLEGWRARSAYKLLQINEKHQILQS-NRRIVDLGSSPGSWSQVAARI 88
D V+ + + + +R+ +KL + ++ +R +D G+S G ++ V R
Sbjct: 48 KDLAVRHDEQDTYVSRAGHKLAGALDAFPAIKPQGKRCLDAGASTGGFTDVLLRR 102
>gi|315038640|ref|YP_004032208.1| hemolysin-like protein [Lactobacillus amylovorus GRL 1112]
gi|325957122|ref|YP_004292534.1| hemolysin-like protein [Lactobacillus acidophilus 30SC]
gi|312276773|gb|ADQ59413.1| hemolysin-like protein [Lactobacillus amylovorus GRL 1112]
gi|325333687|gb|ADZ07595.1| hemolysin-like protein [Lactobacillus acidophilus 30SC]
gi|327183846|gb|AEA32293.1| hemolysin-like protein [Lactobacillus amylovorus GRL 1118]
Length = 270
Score = 35.1 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 51/148 (34%), Gaps = 7/148 (4%)
Query: 37 PYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNT 96
+ + + + +R +KL + + I ++ +D+G+S G ++ VA + G+
Sbjct: 51 KFYVKDDGKKYVSRGGFKLEKALKVFDIDLKDKICLDIGASTGGFTDVALQ-NGAKMVYA 109
Query: 97 RVVAIDILDMEPILG---VKFFKFDFLDLDSWEFIRQAIGGNPDLVLS---DMAYPTIGH 150
V + L + V K +F +F + V D+ P +
Sbjct: 110 LDVGYNQLAWQLRDDPRVVVMEKQNFRYSKPEDFDQGLPDFAMTDVSFISLDLIMPPMCA 169
Query: 151 RKIDHLRTMSLCEAATFFALEMLNIGGD 178
D + L + E + G
Sbjct: 170 ILKDKCDAVCLIKPQFEAGPENVGKHGI 197
>gi|148828521|gb|ABR13879.1| polyprotein [Dengue virus 4]
Length = 3387
Score = 35.1 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 67/183 (36%), Gaps = 13/183 (7%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAI 101
++++ +R + K+ I E+ +++ ++VDLG G WS A + N R
Sbjct: 2536 SKIKHAVSRGSSKIRWIVER-GMIKPKGKVVDLGCGRGGWSYYVATL--KNVTEVRGFTK 2592
Query: 102 DILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSL 161
E + + + ++ + L S + D +L D+ + +
Sbjct: 2593 GGPGHEEPIPMATYGWNLVKLHSGVDVFYKPTEQVDTLLCDIGESSSNPTIEEG-----R 2647
Query: 162 CEAATFFALEMLNIGGDFLVKT---FQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEM 218
L+ +F +K + ++ L +K+ +I SR + EM
Sbjct: 2648 TLRILRMVEPWLSSKPEFCIKVLNPYMPTVIEELEKLQRKYGGNLIRC--PLSRNSTHEM 2705
Query: 219 FLL 221
+ +
Sbjct: 2706 YWV 2708
>gi|46198486|ref|YP_004153.1| hemolysin [Thermus thermophilus HB27]
gi|46196108|gb|AAS80526.1| hemolysin [Thermus thermophilus HB27]
Length = 235
Score = 35.1 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
E + R AYKLL E + + DLG+S G ++QV
Sbjct: 53 EERYVGRGAYKLLGALEAFPVEPRGKVAADLGASTGGFTQVLLER 97
>gi|226377838|ref|YP_002790883.1| polyprotein [Bagaza virus]
gi|54399548|gb|AAV34161.1| polyprotein [Bagaza virus]
Length = 3426
Score = 35.1 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 22/193 (11%)
Query: 40 QRAQLEGWR------ARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNA 93
++A+ EG +R KL + E+ L+ ++VDLG G WS A +
Sbjct: 2562 RKARREGNVTGGHPVSRGTAKLRWLVER-GFLKPRGKVVDLGCGRGGWSYYCATL--KMV 2618
Query: 94 NNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKI 153
+ E + ++ + ++ + L S I + D +L D+ +
Sbjct: 2619 QEVKGYTKGGPGHEEPMMMQSYGWNLVSLKSGIDIFYRPAEHSDTLLCDIGEASPVPEIE 2678
Query: 154 DHLRTMSLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQK-----VIHVKP 208
+ L + A +F +K +L L++ + V
Sbjct: 2679 EARTLKVLQTVDEWLARG----TEEFCIKVL-CPYMPRVLKELERMQSRWGGGLVRV--- 2730
Query: 209 VASRAESVEMFLL 221
SR + EM+ +
Sbjct: 2731 PLSRNSNHEMYWV 2743
>gi|91772977|ref|YP_565669.1| RNA-binding S4 [Methanococcoides burtonii DSM 6242]
gi|91711992|gb|ABE51919.1| RNA-binding S4 domain protein [Methanococcoides burtonii DSM
6242]
Length = 225
Score = 35.1 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 52 AYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
+KL I ++ +++ ++DLGSS G + A+ I
Sbjct: 60 YFKLKGIQDETGLIKEGDSVLDLGSSAGGFIVFASEI 96
>gi|55980515|ref|YP_143812.1| hemolysin [Thermus thermophilus HB8]
gi|55771928|dbj|BAD70369.1| hemolysin [Thermus thermophilus HB8]
Length = 235
Score = 35.1 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 44 LEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
E + R AYKLL E + + DLG+S G ++QV
Sbjct: 53 EERYVGRGAYKLLGALEAFPVEPRGKVAADLGASTGGFTQVLLER 97
>gi|309809484|ref|ZP_07703342.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners SPIN 2503V10-D]
gi|308170156|gb|EFO72191.1| ribosomal RNA large subunit methyltransferase J [Lactobacillus
iners SPIN 2503V10-D]
Length = 278
Score = 35.1 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 34 INDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAAR 87
IN+ + + + +R YKL + I +++ +D+G+S G ++ VA +
Sbjct: 56 INEVFYVKKDSRKYVSRGGYKLEKALNVFNIDLTDKACLDIGASTGGFTDVALQ 109
>gi|320449902|ref|YP_004201998.1| ribosomal RNA large subunit methyltransferase J [Thermus
scotoductus SA-01]
gi|320150071|gb|ADW21449.1| ribosomal RNA large subunit methyltransferase J [Thermus
scotoductus SA-01]
Length = 244
Score = 35.1 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 45 EGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
E + +R AYKLL E + + D+G+S G ++QV
Sbjct: 54 ERYVSRGAYKLLGALEAFAVKVEGKVAADIGASTGGFTQVLLER 97
>gi|309387087|gb|ADO67798.1| pregnancy-associated glycoprotein 9 [Bubalus bubalis]
Length = 370
Score = 35.1 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 56/186 (30%), Gaps = 14/186 (7%)
Query: 15 QKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDL 74
++VK S ++ LN + + + +Q+ +R++ N L++ + + +
Sbjct: 19 RRVKTMRKTLSGKNILNNFLKEHAYRLSQIS---SRAS------NLTFHPLRNIKDKLYV 69
Query: 75 GSSPGSWSQVAARI---TGSNANNTRVVAIDILDMEPILGVKFFKFDFLDLDSWEFIRQA 131
G+ ++ TGS+ V + + F F
Sbjct: 70 GNITIGTPPQEFQVIFDTGSSDLWVPSVFCTSPICSTHVMFRHFDSSTFRPTKKTFSINY 129
Query: 132 IGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLVKTFQG--GTT 189
G V+ D +S+ E +G ++ +F G
Sbjct: 130 GSGRMKGVVVHDTVRIGNLVSTDQPFGLSMAELGFDGIPFDGVMGLNYPKLSFSGAIPIF 189
Query: 190 NDILCL 195
+ +
Sbjct: 190 DKLKNE 195
>gi|218296418|ref|ZP_03497161.1| hemolysin A [Thermus aquaticus Y51MC23]
gi|218243212|gb|EED09743.1| hemolysin A [Thermus aquaticus Y51MC23]
Length = 235
Score = 35.1 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 39 VQRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
V+ + E + R AYKLL E I + + DLG+S G ++QV
Sbjct: 48 VELLEEERYVGRGAYKLLGALEAFPIALAGKVAADLGASTGGFTQVLLER 97
>gi|326803325|ref|YP_004321143.1| ribosomal RNA large subunit methyltransferase J [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650736|gb|AEA00919.1| ribosomal RNA large subunit methyltransferase J [Aerococcus urinae
ACS-120-V-Col10a]
Length = 273
Score = 35.1 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 40 QRAQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVV 99
++ + +R +KL + ++ + + ++D+GSS G ++ VA + G+ + V
Sbjct: 54 RKGHEIPYVSRGGFKLEKAIKQFDLDFTGLNVLDIGSSTGGFTDVALQ-NGAVHSYALDV 112
Query: 100 AIDILDMEPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAY 145
+ LD + I + G PD+ + D+++
Sbjct: 113 GTNQLDWK-IRNDDRVTVMEQTNFRYSQPEDFTEGVPDIAVIDVSF 157
>gi|192359645|ref|YP_001982842.1| putative RNA 2'-O-ribose methyltransferase [Cellvibrio japonicus
Ueda107]
gi|226705352|sp|B3PKB3|RLMM_CELJU RecName: Full=Ribosomal RNA large subunit methyltransferase M;
AltName: Full=23S rRNA 2'-O-ribose methyltransferase
rlmM
gi|190685810|gb|ACE83488.1| hypothetical protein CJA_2381 [Cellvibrio japonicus Ueda107]
Length = 350
Score = 34.7 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
Query: 49 ARSAYKLLQINEKH-------QILQSNRRIVDLGSSPGSWSQVAARI 88
+R+ KL + + L R VDLG++PG W+ +
Sbjct: 182 SRATLKLEEAWHHFIPAADWDRRLAPGMRAVDLGAAPGGWTWQLVQR 228
>gi|87120481|ref|ZP_01076375.1| hypothetical protein MED121_22027 [Marinomonas sp. MED121]
gi|86164124|gb|EAQ65395.1| hypothetical protein MED121_22027 [Marinomonas sp. MED121]
Length = 350
Score = 34.7 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 7/47 (14%)
Query: 49 ARSAYKLLQINEKH-------QILQSNRRIVDLGSSPGSWSQVAARI 88
+RS KL + + +L+ VDLG++PG W+
Sbjct: 182 SRSTLKLEEAMHEFVPAKKWPVLLREGMTAVDLGAAPGGWTYQLVER 228
>gi|56692454|ref|YP_164818.1| NS5 [Usutu virus]
Length = 905
Score = 34.7 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 39/231 (16%), Positives = 76/231 (32%), Gaps = 24/231 (10%)
Query: 6 GSSSRRGLTQKVKNRSCQGSSRDWLNRHIN-----D-PYVQRAQLEGWR------ARSAY 53
G R L ++ K + S D+L D ++A+ +G + +R +
Sbjct: 1 GRPGGRTLGEQWKEKLNGLSKEDFLKYRKEAITEVDRSAARKARRDGNKTGGHPVSRGSA 60
Query: 54 KLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVK 113
KL + E+ Q ++ ++VDLG G WS AA + G
Sbjct: 61 KLRWMVER-QFVKPIGKVVDLGCGRGGWSYYAATLKGVQEVRGY-----TKGGPGHEEPM 114
Query: 114 FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML 173
+ +L + + + D + IG + L
Sbjct: 115 LMQSYGWNLVTMKSGVDVYYKPSE--PCDTLFCDIGESSSSAEVEEQRTLRILEMVSDWL 172
Query: 174 NI-GGDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLL 221
+F +K + L +L++ + + P+ SR + EM+ +
Sbjct: 173 QRGPREFCIKVLCPYMPRVMERLEVLQRRYGGGLVRVPL-SRNSNHEMYWV 222
>gi|219684212|ref|ZP_03539156.1| ribosomal RNA large subunit methyltransferase J [Borrelia garinii
PBr]
gi|219672201|gb|EED29254.1| ribosomal RNA large subunit methyltransferase J [Borrelia garinii
PBr]
Length = 263
Score = 34.7 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 56/160 (35%), Gaps = 9/160 (5%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM 106
+ +R YKLL+ + +I N+ VD+GSS G ++ + + + V +
Sbjct: 63 FVSRGGYKLLEALKDFKIEVKNKICVDVGSSTGGFTDCLLQCGANFVYSVDVGTNQLSYK 122
Query: 107 EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAAT 166
I + + F P+ + D+++ + ++ + +S
Sbjct: 123 LRID-----PRVKVLERTNIFDVTEFKIVPNFAVVDVSFRSSISICVNLIDKLSDNFIIV 177
Query: 167 FFALEMLNIGGDFLVKTF----QGGTTNDILCLLKKHFQK 202
+ + +K F G IL + + F K
Sbjct: 178 LIKPQFEVKSLNLDIKNFNGVVNGDYLKTILQSVIEKFYK 217
>gi|323358624|ref|YP_004225020.1| rRNA methylase [Microbacterium testaceum StLB037]
gi|323274995|dbj|BAJ75140.1| predicted rRNA methylase [Microbacterium testaceum StLB037]
Length = 265
Score = 34.7 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 42 AQLEGWRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARI 88
A + + +R A+KLL + ++ + R +DLG+S G ++QV
Sbjct: 52 ASPDHYVSRGAHKLLAALDAFEVDVAGRVALDLGASTGGFTQVLRER 98
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.126 0.377
Lambda K H
0.267 0.0388 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,990,904,650
Number of Sequences: 14124377
Number of extensions: 96802434
Number of successful extensions: 270515
Number of sequences better than 10.0: 2306
Number of HSP's better than 10.0 without gapping: 2047
Number of HSP's successfully gapped in prelim test: 259
Number of HSP's that attempted gapping in prelim test: 266500
Number of HSP's gapped (non-prelim): 2545
length of query: 227
length of database: 4,842,793,630
effective HSP length: 134
effective length of query: 93
effective length of database: 2,950,127,112
effective search space: 274361821416
effective search space used: 274361821416
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 78 (34.7 bits)