RPSBLAST alignment of GI: 254780313 and protein with PDBid: 2nyu
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} Length = 196
Score = 153 bits (387), Expect = 3e-38
Identities = 65/187 (34%), Positives = 101/187 (54%), Gaps = 7/187 (3%)
Query: 47 WRARSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRV-----VAI 101
+R+RSA+KLL++NE+HQIL+ R++D G++PG+WSQVA + + + + +
Sbjct: 2 YRSRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGV 61
Query: 102 DILDMEPILGVKFFKFDFLDLDSW--EFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTM 159
D+L + P+ G F + + G D++LSDMA G R +DH R +
Sbjct: 62 DLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLI 121
Query: 160 SLCEAATFFALEMLNIGGDFLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMF 219
SLC ++L GG FL KT+ G + + L + FQ V +KP ASR ES E++
Sbjct: 122 SLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKESSEVY 181
Query: 220 LLAKGFR 226
LA +
Sbjct: 182 FLATQYH 188