RPSBLAST alignment of GI: 254780313 and protein with PDBid: 2px2
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A* Length = 269
Score = 105 bits (263), Expect = 1e-23
Identities = 44/235 (18%), Positives = 83/235 (35%), Gaps = 30/235 (12%)
Query: 6 GSSSRRGLTQKVKNRSCQGSSRD----------WLNRHINDPYVQRAQLEG--WRARSAY 53
G + R L ++ K + + ++R + G +R
Sbjct: 1 GRAGGRTLGEQWKEKLNAMGKEEFFSYRKEAILEVDRTEARRARREGNKVGGHPVSRGTA 60
Query: 54 KLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDI---LDMEPIL 110
KL + E+ + Q ++VDLG G WS AA + V EP+L
Sbjct: 61 KLRWLVERRFV-QPIGKVVDLGCGRGGWSYYAATMKNV----QEVRGYTKGGPGHEEPML 115
Query: 111 GVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFAL 170
+ + S + D +L D+ + +I+ RT+ + E
Sbjct: 116 MQSYGWNIV-TMKSGVDVFYKPSEISDTLLCDIG-ESSPSAEIEEQRTLRILE----MVS 169
Query: 171 EMLNIG-GDFLVKTFQGGTTN--DILCLLKKHFQKVIHVKPVASRAESVEMFLLA 222
+ L+ G +F +K + L L++ F + V+ SR + EM+ ++
Sbjct: 170 DWLSRGPKEFCIKILCPYMPKVIEKLESLQRRFGGGL-VRVPLSRNSNHEMYWVS 223