RPSBLAST alignment of GI: 254780313 and protein with PDBid: 3evf
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, ATP-binding, capsid protein, cleavage on PAIR of basic residues; HET: GTA SAH; 1.45A {Yellow fever virus 17D} PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A* Length = 277
Score = 148 bits (374), Expect = 1e-36
Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 24/235 (10%)
Query: 6 GSSSRRGLTQKVKNRSCQGSSRD----------WLNRHINDPYVQRAQLEG--WRARSAY 53
GS++ + L + K R ++R ++ +++ +R
Sbjct: 2 GSANGKTLGEVWKRELNLLDKRQFELYKRTDIVEVDRDTARRHLAEGKVDTGVAVSRGTA 61
Query: 54 KLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVK 113
KL +E+ + + R++DLG G W AA + + D +P+
Sbjct: 62 KLRWFHERGYV-KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH-EKPMNVQ- 118
Query: 114 FFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEML 173
++ + I + D +L D+ G + + L
Sbjct: 119 SLGWNIITFKDKTDIHRLEPVKCDTLLCDI-----GEXXXXXVTEGERTVRVLDTVEKWL 173
Query: 174 NIG-GDFLVKTFQG--GTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGF 225
G +F VK + L LL++ F + P SR + EM+ ++
Sbjct: 174 ACGVDNFCVKVLAPYMPDVLEKLELLQRRFGGTVIRNP-LSRNSTHEMYYVSGAR 227