RPSBLAST alignment of GI: 254780313 and protein with PDBid: 3lkz

>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus} Length = 321
 Score = 94.5 bits (234), Expect = 2e-20
 Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 10/176 (5%)

Query: 50  RSAYKLLQINEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPI 109
           R   KL  + E+  + +   +++DLG   G W    A                    E  
Sbjct: 78  RGTAKLRWLVERRFL-EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGH--EEP 134

Query: 110 LGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFA 169
             V+ + ++ + + S   +        D +L D+   +    +++  RT+ + E      
Sbjct: 135 QLVQSYGWNIVTMKSGVDVFYRPSECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMV---E 190

Query: 170 LEMLNIGGDFLVKTFQGGTTN--DILCLLKKHFQKVIHVKPVASRAESVEMFLLAK 223
             +     +F VK          + + LL++ +   + V+   SR  + EM+ +++
Sbjct: 191 DWLHRGPREFCVKVLCPYMPKVIEKMELLQRRYGGGL-VRNPLSRNSTHEMYWVSR 245