HHsearch alignment of GI: 254780314 and MMDB domain: 3prn_A_

>3prn_A (A:) Porin; integral membrane protein, pore eyelet mutant; HET: C8E; 1.90A {Rhodopseudomonas blastica}
Probab=97.62  E-value=0.0052  Score=38.23  Aligned_cols=156  Identities=14%  Similarity=0.082  Sum_probs=111.8

Q ss_pred             EEEEEEECCCEEEEEEHHHCCCCC--CCCEEEEEEEEEEEECCEEEEEEEEEECCCCCCEEEEEEEECCCCCCEEEEEEE
Q ss_conf             268998257545103303214666--654034788963454126899985221146651279888613678820246788
Q gi|254780314|r  179 SLSYRHSFGLLKAGLSTDLLQKDG--LKQVLGIGYMASYAIGKIRSTVTGGYDAGTNNVAIRANISSPVSRAGTLDCGAV  256 (351)
Q Consensus       179 SirYqYe~G~F~AGiSvDeLE~dg--~~n~VGV~g~vsg~aGavS~qltGGyDtd~eeGAIRAl~ta~iG~PGTlglAgV  256 (351)
                      -+.|.++.+.|+.+.+...-+.+.  ..+.-+....+.++.+.+.....-.......+.+-.-.+.+... .+-+-+++.
T Consensus       132 ~~~~s~~~~g~~~~a~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~y~~~~~~~~~~~~~~~~a~y~-~~~~~l~a~  210 (289)
T 3prn_A          132 GIAVTYSISGVNLYLSYVDPDQTVDSSLVTEEFGIAADWSNDMISLAAAYTTDAGGIVDNDIAFVGAAYK-FNDAGTVGL  210 (289)
T ss_dssp             EEEEEEECSSEEEEEEEEETTTTSCGGGSCCEEEEEEEEECSSEEEEEEEEESGGGCTTCCEEEEEEEEC-CSSSEEEEE
T ss_pred             EEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEEEEE-ECCEEEEEE
T ss_conf             7997710068999998832677654555673589999902786468988864035655543210001454-054268889


Q ss_pred             EECCCCCCCCCCCEEEEEEEEEEECEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCC
Q ss_conf             73386400011211366435563110478604525404567678522778778888851591277898732742113542
Q gi|254780314|r  257 WASGDNSYYDKSKYSVFAGYKFDVAKSITISGGGQYFGDINKTGKDGWSAGISAKYMISSGLEAQASVAFNDNFVKKGVA  336 (351)
Q Consensus       257 wASgpNaYY~~SEWaVAAeYaikaTDKl~ITPG~QY~gd~~~sg~DaWk~GlTvDYqItegL~tK~SVqY~D~~~~~~~~  336 (351)
                      |.-..+.-.+...|.+.+.|.+..   +++.-+.++..+  ....++|.  +.++|++..++..-+.++|.|.       
T Consensus       211 y~~~~~~~~~~~~~~~~~~Y~~~~---~~~~~~y~~~~~--~~~~~~~~--~g~~Y~l~k~~~~yae~~~~~~-------  276 (289)
T 3prn_A          211 NWYDNGLSTAGDQVTLYGNYAFGA---TTVRAYVSDIDR--AGADTAYG--IGADYQFAEGVKVSGSVQSGFA-------  276 (289)
T ss_dssp             EEEECTTSTTCSEEEEEEEEEETT---EEEEEEEEEECS--TTCCCEEE--EEEEEEEETTEEEEEEEEECTT-------
T ss_pred             EEEECCCCCCCEEEEEEEEEEECC---EEEEEEEEECCC--CCCCCEEE--EEEEEECCCCEEEEEEEEEEEC-------
T ss_conf             998503776304899999999488---889999961577--77641899--9999984898599999999708-------


Q ss_pred             CCCCCCCCCCHHCCC
Q ss_conf             346631001101139
Q gi|254780314|r  337 IDKGVDLSVGLKKSF  351 (351)
Q Consensus       337 ~d~g~d~t~gl~~sf  351 (351)
                        +++..++||.-.|
T Consensus       277 --~~~~~~vG~r~~F  289 (289)
T 3prn_A          277 --NETVADVGVRFDF  289 (289)
T ss_dssp             --CCEEEEEEEEEEC
T ss_pred             --CCCEEEEEEEEEC
T ss_conf             --9825705757769