HHsearch results for GI: 254780314 and protein with PDBid: 2por_A
>2por_A Porin; HET: C8E; 1.80A {Rhodobacter capsulatus} SCOP: f.4.3.1 PDB: 3por_A*
Probab=97.21 E-value=0.012 Score=35.14 Aligned_cols=158 Identities=16% Similarity=0.102 Sum_probs=97.1
Q ss_pred CEEEE-EEECCCEEEEEEHHHCCCC--CCCCEEEEEEEEEEEECCEEEEEEEEEEC------CCCCCEEEEEEEECCCCC
Q ss_conf 22689-9825754510330321466--66540347889634541268999852211------466512798886136788
Q gi|254780314|r 178 MSLSY-RHSFGLLKAGLSTDLLQKD--GLKQVLGIGYMASYAIGKIRSTVTGGYDA------GTNNVAIRANISSPVSRA 248 (351)
Q Consensus 178 ~SirY-qYe~G~F~AGiSvDeLE~d--g~~n~VGV~g~vsg~aGavS~qltGGyDt------d~eeGAIRAl~ta~iG~P 248 (351)
+++.| ..+.+.|..+++.-.-+.+ ...++-.....+.+..+++...+....-. ..+..+.++......+
T Consensus 116 ~~~~y~sp~~~g~~~~~~y~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~-- 193 (301)
T 2por_A 116 NPVLLYTYSAGAFSVAASMSDGKVGETSEDDAQEMAVAAAYTFGNYTVGLGYEKIDSPDTALMADMEQLELAAIAKFG-- 193 (301)
T ss_dssp BCEEEEEEEETTEEEEEEECCSBSTTSSCBCCEEEEEEEEEEETTEEEEEEEEEEECSCTTTSCCEEEEEEEEEEEET--
T ss_pred CEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEHHHCCCCCCCCCCCCCEEEEEEEEEEC--
T ss_conf 115999511266579999940787665445576115788751575020320011134431124554226541034204--
Q ss_pred CEEEEEEEEEC------------------CCCCCCCCCCEEEEEEEEEEECEEEEECCCEEEECCCCCCCCCEEEEEEEE
Q ss_conf 20246788733------------------864000112113664355631104786045254045676785227787788
Q gi|254780314|r 249 GTLDCGAVWAS------------------GDNSYYDKSKYSVFAGYKFDVAKSITISGGGQYFGDINKTGKDGWSAGISA 310 (351)
Q Consensus 249 GTlglAgVwAS------------------gpNaYY~~SEWaVAAeYaikaTDKl~ITPG~QY~gd~~~sg~DaWk~GlTv 310 (351)
.+.+.+.+.. ......+...|.+.+.|.+.+ .+...+|.-.-+....+....+|-+
T Consensus 194 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~y~~g~-----~~~~~~y~~~~~~~~~~~~~~~lG~ 267 (301)
T 2por_A 194 -ATNVKAYYADGELDRDFARAVFDLTPVAAAATAVDHKAYGLSVDSTFGA-----TTVGGYVQVLDIDTIDDVTYYGLGA 267 (301)
T ss_dssp -TEEEEEEEEEEEEEHHHHHHHTTCCCCSSCCCEEEEEEEEEEEEEEETT-----EEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred -CEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEECCC-----EEEEEEEEEECCCCCCCEEEEEEEE
T ss_conf -1788987765530123322101332013566542100489999998187-----7899999996368888538999999
Q ss_pred EEEEECCCEEEEEEEECCCCCCCCCCCCCCCC-CCCCHHCCC
Q ss_conf 88851591277898732742113542346631-001101139
Q gi|254780314|r 311 KYMISSGLEAQASVAFNDNFVKKGVAIDKGVD-LSVGLKKSF 351 (351)
Q Consensus 311 DYqItegL~tK~SVqY~D~~~~~~~~~d~g~d-~t~gl~~sf 351 (351)
||++..++...+.+.+.|. |+.++ ..+|+.-+|
T Consensus 268 ~Y~lsk~~~~~~~y~~~~~--------d~~~~~~~~G~~~~F 301 (301)
T 2por_A 268 SYDLGGGASIVGGIADNDL--------PNSDMVADLGVKFKF 301 (301)
T ss_dssp EEEEETTEEEEEEEEEECS--------SSCCCEEEEEEEEEC
T ss_pred EEECCCCEEEEEEEEEEEC--------CCCCEEEEEEEEEEC
T ss_conf 9988999899999999816--------899647999879989