Query gi|254780314|ref|YP_003064727.1| outer membrane protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 351
No_of_seqs 25 out of 27
Neff 1.8
Searched_HMMs 13730
Date Wed Jun 1 02:17:52 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780314.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3prna_ f.4.3.1 (A:) Porin {Rh 97.9 0.00066 4.8E-08 41.4 17.0 153 178-351 131-289 (289)
2 d2fgqx1 f.4.3.1 (X:3-332) Pori 95.9 0.053 3.9E-06 29.5 16.3 144 178-329 134-295 (330)
3 d2pora_ f.4.3.1 (A:) Porin {Rh 92.0 0.34 2.5E-05 24.5 20.5 238 76-351 13-301 (301)
4 d2zfga1 f.4.3.1 (A:1-340) Pori 90.7 0.47 3.4E-05 23.6 18.7 245 84-351 43-340 (340)
5 d1p4ta_ f.4.1.1 (A:) Outer mem 85.6 1 7.3E-05 21.6 11.3 28 302-329 106-133 (155)
6 d1qjpa_ f.4.1.1 (A:) Outer mem 84.6 1.1 8.1E-05 21.3 11.4 68 266-333 73-150 (171)
7 d1fepa_ f.4.3.3 (A:) Ferric en 68.9 3.2 0.00023 18.5 7.3 61 262-324 392-452 (714)
8 d3brda3 b.42.7.1 (A:381-541) D 42.7 8.7 0.00064 15.7 2.8 29 161-191 8-37 (161)
9 d1qj8a_ f.4.1.1 (A:) Outer mem 37.8 10 0.00076 15.2 10.6 29 301-329 104-132 (148)
10 d1u8fo2 d.81.1.1 (O:152-315) G 36.9 8.8 0.00064 15.7 2.1 64 13-87 24-87 (164)
11 d1phoa_ f.4.3.1 (A:) Porin {Es 33.5 12 0.00089 14.8 23.8 238 96-351 47-330 (330)
12 d1te1b_ b.29.1.11 (B:) Xylanas 33.5 10 0.00073 15.3 2.0 15 144-158 8-22 (190)
13 d2g82a2 d.81.1.1 (A:149-310) G 27.4 5.1 0.00037 17.2 -0.4 62 14-87 25-86 (162)
14 d2iwgb1 b.29.1.22 (B:4-182) 52 25.1 17 0.0012 13.9 2.3 10 257-266 127-136 (179)
15 d3cmco2 d.81.1.1 (O:149-312) G 23.4 5.6 0.00041 16.9 -0.8 62 14-87 25-86 (163)
16 d1h4ga_ b.29.1.11 (A:) Xylanas 22.0 13 0.00092 14.7 0.8 15 144-158 8-22 (206)
17 d2q03a1 b.159.2.1 (A:5-137) Un 21.4 20 0.0015 13.5 6.9 93 153-258 13-112 (133)
No 1
>d3prna_ f.4.3.1 (A:) Porin {Rhodopseudomonas blastica, strain DSM2131 [TaxId: 1075]}
Probab=97.94 E-value=0.00066 Score=41.38 Aligned_cols=153 Identities=13% Similarity=0.074 Sum_probs=96.7
Q ss_pred CEEEEEEECCCEEEEEEHHHCCCCCC--CCEEEEEEEEEEEECCEEEEEEEEEECCCC----CCEEEEEEEECCCCCCEE
Q ss_conf 22689982575451033032146666--540347889634541268999852211466----512798886136788202
Q gi|254780314|r 178 MSLSYRHSFGLLKAGLSTDLLQKDGL--KQVLGIGYMASYAIGKIRSTVTGGYDAGTN----NVAIRANISSPVSRAGTL 251 (351)
Q Consensus 178 ~SirYqYe~G~F~AGiSvDeLE~dg~--~n~VGV~g~vsg~aGavS~qltGGyDtd~e----eGAIRAl~ta~iG~PGTl 251 (351)
..+.|.++.+.|+++++.-.=+.+.. .+..+....+.++.+++.. -..|+.... .-+......... +.+
T Consensus 131 ~i~y~sp~~~Gf~~~~~y~~~~~~~~~~~~~~~~~~~~~y~~~~~~~--~~~y~~~~~~~~~~~~~~~~~~~~~---~~~ 205 (289)
T d3prna_ 131 NGIAVTYSISGVNLYLSYVDPDQTVDSSLVTEEFGIAADWSNDMISL--AAAYTTDAGGIVDNDIAFVGAAYKF---NDA 205 (289)
T ss_dssp EEEEEEEECSSEEEEEEEEETTTTSCGGGSCCEEEEEEEEECSSEEE--EEEEEESGGGCTTCCEEEEEEEECC---SSS
T ss_pred CEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCEE--EEEEEECCCCCCCCCCCEEEEEEEE---CCE
T ss_conf 27996611277989988842677665666663268998804786134--6656410477654432101014540---551
Q ss_pred EEEEEEECCCCCCCCCCCEEEEEEEEEEECEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCC
Q ss_conf 46788733864000112113664355631104786045254045676785227787788888515912778987327421
Q gi|254780314|r 252 DCGAVWASGDNSYYDKSKYSVFAGYKFDVAKSITISGGGQYFGDINKTGKDGWSAGISAKYMISSGLEAQASVAFNDNFV 331 (351)
Q Consensus 252 glAgVwASgpNaYY~~SEWaVAAeYaikaTDKl~ITPG~QY~gd~~~sg~DaWk~GlTvDYqItegL~tK~SVqY~D~~~ 331 (351)
.+.+.+....+.--+...|.+.+.|.+.+ .+..++|...-... +.-..+|.++|+++.++..-+.+++.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~y~~g~-----~~~~~~y~~~~~~~--~~~~~~lg~~Y~ls~~~~l~a~~~~~~~-- 276 (289)
T d3prna_ 206 GTVGLNWYDNGLSTAGDQVTLYGNYAFGA-----TTVRAYVSDIDRAG--ADTAYGIGADYQFAEGVKVSGSVQSGFA-- 276 (289)
T ss_dssp EEEEEEEEECTTSTTCSEEEEEEEEEETT-----EEEEEEEEEECSTT--CCCEEEEEEEEEEETTEEEEEEEEECTT--
T ss_pred EEEEEEEEEECCCCCCEEEEEEEEEEECC-----EEEEEEEEECCCCC--CCCEEEEEEEEECCCCEEEEEEEEEEEC--
T ss_conf 68888888603676413799999998388-----89999996157787--6418999999984998499999999808--
Q ss_pred CCCCCCCCCCCCCCCHHCCC
Q ss_conf 13542346631001101139
Q gi|254780314|r 332 KKGVAIDKGVDLSVGLKKSF 351 (351)
Q Consensus 332 ~~~~~~d~g~d~t~gl~~sf 351 (351)
++ ...++|++-+|
T Consensus 277 ------~~-~~a~~Gv~~~F 289 (289)
T d3prna_ 277 ------NE-TVADVGVRFDF 289 (289)
T ss_dssp ------CC-EEEEEEEEEEC
T ss_pred ------CC-CEEEEEEEEEC
T ss_conf ------98-25725657769
No 2
>d2fgqx1 f.4.3.1 (X:3-332) Porin {Comamonas acidovorans [TaxId: 80866]}
Probab=95.87 E-value=0.053 Score=29.54 Aligned_cols=144 Identities=17% Similarity=0.177 Sum_probs=83.6
Q ss_pred CEEEEE-EECCCEEEEEEHHHCCCC--CCC--CEEEEEEEEEEEECCEEEEEEEEEECC--------CCCCEEEEEEEEC
Q ss_conf 226899-825754510330321466--665--403478896345412689998522114--------6651279888613
Q gi|254780314|r 178 MSLSYR-HSFGLLKAGLSTDLLQKD--GLK--QVLGIGYMASYAIGKIRSTVTGGYDAG--------TNNVAIRANISSP 244 (351)
Q Consensus 178 ~SirYq-Ye~G~F~AGiSvDeLE~d--g~~--n~VGV~g~vsg~aGavS~qltGGyDtd--------~eeGAIRAl~ta~ 244 (351)
++|+|+ -+++.|+++++.-.-+++ ... ..-..+..+.+..|++...+ +|+-. .+.-+.+.-++-.
T Consensus 134 n~i~Y~sp~~~Gf~~~~~y~~~~~~~~~~~~~~~~~~~~~~~Y~~g~l~~~~--~y~~~~~~~~~~~~~~~~~~~ga~Y~ 211 (330)
T d2fgqx1 134 NLISYYTPNFGGFNAGFGYAFDEKQTIGTADSVGRYIGGYVAYDNGPLSASL--GLAQQKTAVGGLATDRDEITLGASYN 211 (330)
T ss_dssp SEEEEECCCBTTEEEEEEEECCTTCCBTTBSSTTCEEEEEEEEECSSEEEEE--EEEEEEEEETTEEEEEEEEEEEEEEE
T ss_pred EEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEE--EEEEECCCCCCCCCCCCEEEEEEEEE
T ss_conf 0699976644534256555137787643332311203468998069768999--99870456544336620489988999
Q ss_pred CCCCCEEEEEEEEECC-----CCCCCCCCCEEEEEEEEEEECEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEEECCCE
Q ss_conf 6788202467887338-----64000112113664355631104786045254045676785227787788888515912
Q gi|254780314|r 245 VSRAGTLDCGAVWASG-----DNSYYDKSKYSVFAGYKFDVAKSITISGGGQYFGDINKTGKDGWSAGISAKYMISSGLE 319 (351)
Q Consensus 245 iG~PGTlglAgVwASg-----pNaYY~~SEWaVAAeYaikaTDKl~ITPG~QY~gd~~~sg~DaWk~GlTvDYqItegL~ 319 (351)
++ |-+| ++.|... ...-.....|.+.+.|.+...-++++ +.++. +.+..+.++....|-.||++.....
T Consensus 212 ~g-~~~l--~~~y~~~~~~~~~~~~~~~~~~~~~a~y~~~~~~~~~~--~y~~~-~~~~~~~~~~~~~lg~~Y~lSKrT~ 285 (330)
T d2fgqx1 212 FG-VAKL--SGLLQQTKFKRDIGGDIKTNSYMLGASAPVGGVGEVKL--QYALY-DQKAIDSKAHQITLGYVHNLSKRTA 285 (330)
T ss_dssp CS-SCEE--EEEEEEEEEEETTSCEEEEEEEEEEEEEEETTTEEEEE--EEEEE-EEGGGTEEEEEEEEEEEEESSSSEE
T ss_pred EE-EEEE--EEEEEEEEECCCCCCEEEEEEEEEEEEEEECCCEEEEE--EEEEE-ECCCCCCCCEEEEEEEEEECCCCHH
T ss_conf 65-4899--99998766214667527776799988999546178999--99998-0556789724999999997567618
Q ss_pred EEEEEEECCC
Q ss_conf 7789873274
Q gi|254780314|r 320 AQASVAFNDN 329 (351)
Q Consensus 320 tK~SVqY~D~ 329 (351)
.-+.+-|.++
T Consensus 286 lYa~~~y~~n 295 (330)
T d2fgqx1 286 LYGNLAFLKN 295 (330)
T ss_dssp EEEEEEEEEE
T ss_pred HHHHHHHHHC
T ss_conf 7442065112
No 3
>d2pora_ f.4.3.1 (A:) Porin {Rhodobacter capsulatus [TaxId: 1061]}
Probab=92.04 E-value=0.34 Score=24.49 Aligned_cols=238 Identities=16% Similarity=0.117 Sum_probs=126.9
Q ss_pred CCCCCCCCCEEEEEEEEEECC---CCEEEEEEEEEECCCHHCCCCCCCCHHEEEEECCCCCCCHHHHEEEH----HHEEE
Q ss_conf 655433342000148997056---86134999997422000000111210001210355551125200011----00000
Q gi|254780314|r 76 EFNSLAYDIPVKGNLEVNANA---GDVTGVAKLKLAVDDVLSMQFAESDVRALAFTVPSSKLSVEELSLSM----KGARL 148 (351)
Q Consensus 76 e~n~~~~d~~~~g~~~~~a~~---g~~tgv~~~~~~~d~~~~~~~~~~d~~a~~~~~~Ss~l~ldeayLdi----~GfRa 148 (351)
..++.++....+-.+-|.... ..++..+++++..+.-.. ..+++|+-+ +-+++
T Consensus 13 ~~~~~~~~~~s~sRi~~~g~~~l~~Gl~~~~~~e~~~~~~~~--------------------~~~~~~vgl~g~fG~v~~ 72 (301)
T d2pora_ 13 MYNGDDWNFSSRSRVLFTMSGTTDSGLEFGASFKAHESVGAE--------------------TGEDGTVFLSGAFGKIEM 72 (301)
T ss_dssp EECSSCEEEEEEEEEEEEEEEECTTCCEEEEEEEGGGHHHHT--------------------TTSSSEEEEEETTEEEEE
T ss_pred EEECCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEEECCCCC--------------------CCCCEEEEEECCCEEEEE
T ss_conf 984898641105699999899988981999999998326888--------------------654001788615449984
Q ss_pred CCEEEECC----CCCCCCC----------CEEEECCCCCCCCCCEEEE-EEECCCEEEEEEHHHCCCCC--CCCEEEEEE
Q ss_conf 12220024----4445555----------1023112224443322689-98257545103303214666--654034788
Q gi|254780314|r 149 GYYKSWSD----EVNPVYS----------PTTLYNDARGLDKMMSLSY-RHSFGLLKAGLSTDLLQKDG--LKQVLGIGY 211 (351)
Q Consensus 149 G~FySWWD----EtddIgS----------~~TL~Nd~rg~dk~~SirY-qYe~G~F~AGiSvDeLE~dg--~~n~VGV~g 211 (351)
|--++=.+ .+++.+. +...-+....-..-++|.| .++++.|.++++.-.-+... ..++-+...
T Consensus 73 Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~y~sp~~~Gf~~~a~y~~~~~~~~~~~~~~~~~~ 152 (301)
T d2pora_ 73 GDALGASEALFGDLYEVGYTDLDDRGGNDIPYLTGDERLTAEDNPVLLYTYSAGAFSVAASMSDGKVGETSEDDAQEMAV 152 (301)
T ss_dssp ESCBCHHHHHHCCSCCCTTTTCCTTSCSSCCCSSBTTSSCBTTBCEEEEEEEETTEEEEEEECCSBSTTSSCBCCEEEEE
T ss_pred CCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEEE
T ss_conf 34023532000010123444555420221234456555444122026614643775899998733576654423652024
Q ss_pred EEEEEECCEEEEEEEEEECCCC--------CCEEEEEEEECCCCCCEEEEEEEEECC------------------CCCCC
Q ss_conf 9634541268999852211466--------512798886136788202467887338------------------64000
Q gi|254780314|r 212 MASYAIGKIRSTVTGGYDAGTN--------NVAIRANISSPVSRAGTLDCGAVWASG------------------DNSYY 265 (351)
Q Consensus 212 ~vsg~aGavS~qltGGyDtd~e--------eGAIRAl~ta~iG~PGTlglAgVwASg------------------pNaYY 265 (351)
.+.+..+++... .+|+.... ....++......+ .+-+.+.+... ...-.
T Consensus 153 ~~~y~~~~~~~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (301)
T d2pora_ 153 AAAYTFGNYTVG--LGYEKIDSPDTALMADMEQLELAAIAKFG---ATNVKAYYADGELDRDFARAVFDLTPVAAAATAV 227 (301)
T ss_dssp EEEEEETTEEEE--EEEEEEECSCTTTSCCEEEEEEEEEEEET---TEEEEEEEEEEEEEHHHHHHHTTCCCCSSCCCEE
T ss_pred EEEEECCCCCEE--EEEECCCCCCCCCCCCCCEEEEEEEEECC---CEEEEEEEEEEEECCCCCCEEEEECCCCCCCCCC
T ss_conf 455505771114--32000124422345553203467775013---1899999999850332011022000123455542
Q ss_pred CCCCEEEEEEEEEEECEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCC-CCC
Q ss_conf 1121136643556311047860452540456767852277877888885159127789873274211354234663-100
Q gi|254780314|r 266 DKSKYSVFAGYKFDVAKSITISGGGQYFGDINKTGKDGWSAGISAKYMISSGLEAQASVAFNDNFVKKGVAIDKGV-DLS 344 (351)
Q Consensus 266 ~~SEWaVAAeYaikaTDKl~ITPG~QY~gd~~~sg~DaWk~GlTvDYqItegL~tK~SVqY~D~~~~~~~~~d~g~-d~t 344 (351)
....|.+.+.|.+.+. ++.++|.-.-+..+.+.-..+|-++|++..+...-+.+.+.+. |+.+ -..
T Consensus 228 ~~~~~~~~~~y~~g~~-----~~~~~y~~~~~~~~~~~~~~~lG~~Y~Lsk~t~ly~~y~~~~~--------d~~~~~~~ 294 (301)
T d2pora_ 228 DHKAYGLSVDSTFGAT-----TVGGYVQVLDIDTIDDVTYYGLGASYDLGGGASIVGGIADNDL--------PNSDMVAD 294 (301)
T ss_dssp EEEEEEEEEEEEETTE-----EEEEEEEEEEETTTEEEEEEEEEEEEEEETTEEEEEEEEEECS--------SSCCCEEE
T ss_pred CEEEEEEEEEEEECCE-----EEEEEEEEECCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEC--------CCCCEEEE
T ss_conf 1010113468971324-----7889999841688886369999999978999799999999835--------89873799
Q ss_pred CCHHCCC
Q ss_conf 1101139
Q gi|254780314|r 345 VGLKKSF 351 (351)
Q Consensus 345 ~gl~~sf 351 (351)
.|+.-+|
T Consensus 295 ~G~~~~F 301 (301)
T d2pora_ 295 LGVKFKF 301 (301)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
T ss_conf 9649989
No 4
>d2zfga1 f.4.3.1 (A:1-340) Porin {Escherichia coli, different sequences [TaxId: 562]}
Probab=90.71 E-value=0.47 Score=23.65 Aligned_cols=245 Identities=15% Similarity=0.103 Sum_probs=117.9
Q ss_pred CEEEEEEEEEECCCCEEEEEEEEEECCCHHCCCCCCCCHHEEEEECCCCCCCHHHHEEEHH-----HEEECCEEEECC--
Q ss_conf 2000148997056861349999974220000001112100012103555511252000110-----000012220024--
Q gi|254780314|r 84 IPVKGNLEVNANAGDVTGVAKLKLAVDDVLSMQFAESDVRALAFTVPSSKLSVEELSLSMK-----GARLGYYKSWSD-- 156 (351)
Q Consensus 84 ~~~~g~~~~~a~~g~~tgv~~~~~~~d~~~~~~~~~~d~~a~~~~~~Ss~l~ldeayLdi~-----GfRaG~FySWWD-- 156 (351)
+-+||.-++. +.++...++.+.++-- . ++ ..-....+..+++|+-|. -+|+|--++-+.
T Consensus 43 iG~~g~~~l~---~gl~a~~~~E~~~~~~--~----~~-----~~~~~~~~~~R~~yvGl~~~~~G~v~~Gr~~~~~~~~ 108 (340)
T d2zfga1 43 LGFKGETQIN---SDLTGYGQWEYNFQGN--N----SE-----GADAQTGNKTRLAFAGLKYADVGSFDYGRNYGVVYDA 108 (340)
T ss_dssp EEEEEEEECS---SSEEEEEEEEEEEESS--S----CS-----STTTTTTCEEEEEEEEEEETTTEEEEEEEEECTTHHH
T ss_pred EEEEEEEECC---CCEEEEEEEEEEEECC--C----CC-----CCCCCCCCCCEEEEEEEECCCCEEEEEECCCCHHHHH
T ss_conf 9999999888---9839999999779868--8----87-----6777766432269997643885389985236578642
Q ss_pred --CCCCC---CCCEEEECCCCCCCCCCEEEEEEEC-----CCEEEEEE--HHHCCC-CCCCCEEEEEEEEEEEECCEEEE
Q ss_conf --44455---5510231122244433226899825-----75451033--032146-66654034788963454126899
Q gi|254780314|r 157 --EVNPV---YSPTTLYNDARGLDKMMSLSYRHSF-----GLLKAGLS--TDLLQK-DGLKQVLGIGYMASYAIGKIRST 223 (351)
Q Consensus 157 --EtddI---gS~~TL~Nd~rg~dk~~SirYqYe~-----G~F~AGiS--vDeLE~-dg~~n~VGV~g~vsg~aGavS~q 223 (351)
-+|++ ++........-....-.+++|.... ..++.++. ...-.. ....+..+.+..+++..+++.
T Consensus 109 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~-- 186 (340)
T d2zfga1 109 LGYTDMLPEFGGDTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFG-- 186 (340)
T ss_dssp HTTTCCCSSSCCTTCCTTSTTSSEEEEEEEEEESHHHHTSTTEEEEEEEECCBCCSSSTTCBCCEEEEEEEEEETTEE--
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEECCCEEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCE--
T ss_conf 112453101366532235434566565289703334130322899999702466665445557402100122578826--
Q ss_pred EEEEEECCC--------------CCCEEEEEEEECCCCCCEEEEEEEEECCCCCC-------------CCCCCEEEEEEE
Q ss_conf 985221146--------------65127988861367882024678873386400-------------011211366435
Q gi|254780314|r 224 VTGGYDAGT--------------NNVAIRANISSPVSRAGTLDCGAVWASGDNSY-------------YDKSKYSVFAGY 276 (351)
Q Consensus 224 ltGGyDtd~--------------eeGAIRAl~ta~iG~PGTlglAgVwASgpNaY-------------Y~~SEWaVAAeY 276 (351)
+.+.|.... ..-+++ +.+... .+.+.+++.|....+.. .....|.+.|.|
T Consensus 187 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~Y 263 (340)
T d2zfga1 187 IVGAYGAADRTNLQEAQPLGNGKKAEQWA--TGLKYD-ANNIYLAANYGETRNATPITNKFTNTSGFANKTQDVLLVAQY 263 (340)
T ss_dssp EEEEEEEEECCHHHHTSSBCCCSEEEEEE--EEEEEE-ETTEEEEEEEEEEESCSEEEETTTTEEEECSEEEEEEEEEEE
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCEEEEE--EEEEEE-ECCEEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEE
T ss_conf 77777753046653333335664112576--424897-112899999988850344222345665542036789999999
Q ss_pred EEEECEEEEECCCEEEECCCC--CCC--CCEEEEEEEEEEEEECCCEEEEEEEE--CCCCCCCCCCCCCCCCCCCCHHCC
Q ss_conf 563110478604525404567--678--52277877888885159127789873--274211354234663100110113
Q gi|254780314|r 277 KFDVAKSITISGGGQYFGDIN--KTG--KDGWSAGISAKYMISSGLEAQASVAF--NDNFVKKGVAIDKGVDLSVGLKKS 350 (351)
Q Consensus 277 aikaTDKl~ITPG~QY~gd~~--~sg--~DaWk~GlTvDYqItegL~tK~SVqY--~D~~~~~~~~~d~g~d~t~gl~~s 350 (351)
.+. ..+++..+.+|.-.-+ ..+ .......+-++|++...+..-++-.+ .|. - +....++-+-.++||.-.
T Consensus 264 ~~~--~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~vG~~Y~lsk~~~~y~~Y~~~~~d~-~-~~~~~~~~~~~~~G~ry~ 339 (340)
T d2zfga1 264 QFD--FGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDS-D-NKLGVGSDDTVAVGIVYQ 339 (340)
T ss_dssp CCT--TSEEEEEEEEEEEEEEETTTEEEEEEEEEEEEEEEEEETTEEEEEEEEEECCCT-T-CTTCCCCBCEEEEEEEEE
T ss_pred EEC--CCEEEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEECCCC-C-CCCCCCCCCEEEEEEEEE
T ss_conf 726--765899999999503566777766348999999999469989999999982257-7-667776787999999998
Q ss_pred C
Q ss_conf 9
Q gi|254780314|r 351 F 351 (351)
Q Consensus 351 f 351 (351)
|
T Consensus 340 F 340 (340)
T d2zfga1 340 F 340 (340)
T ss_dssp C
T ss_pred C
T ss_conf 9
No 5
>d1p4ta_ f.4.1.1 (A:) Outer membrane protein NspA {Neisseria meningitidis [TaxId: 487]}
Probab=85.60 E-value=1 Score=21.59 Aligned_cols=28 Identities=14% Similarity=0.232 Sum_probs=25.6
Q ss_pred CEEEEEEEEEEEEECCCEEEEEEEECCC
Q ss_conf 2277877888885159127789873274
Q gi|254780314|r 302 DGWSAGISAKYMISSGLEAQASVAFNDN 329 (351)
Q Consensus 302 DaWk~GlTvDYqItegL~tK~SVqY~D~ 329 (351)
-+|.+|+=++|+|++++..++..+|.+-
T Consensus 106 ~~~~~g~G~~y~lt~n~~~~~eyry~~~ 133 (155)
T d1p4ta_ 106 IGLGVLTGVSYAVTPNVDLDAGYRYNYI 133 (155)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEEEEEECCCEEEEEEEEEEEC
T ss_conf 6258998999993599899999999975
No 6
>d1qjpa_ f.4.1.1 (A:) Outer membrane protein A (OMPA) transmembrane domain {Escherichia coli [TaxId: 562]}
Probab=84.59 E-value=1.1 Score=21.30 Aligned_cols=68 Identities=12% Similarity=0.150 Sum_probs=45.1
Q ss_pred CCCCEEEEEEEEEEECEEEEECC--CEEEECCC---CC-----CCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCCC
Q ss_conf 11211366435563110478604--52540456---76-----78522778778888851591277898732742113
Q gi|254780314|r 266 DKSKYSVFAGYKFDVAKSITISG--GGQYFGDI---NK-----TGKDGWSAGISAKYMISSGLEAQASVAFNDNFVKK 333 (351)
Q Consensus 266 ~~SEWaVAAeYaikaTDKl~ITP--G~QY~gd~---~~-----sg~DaWk~GlTvDYqItegL~tK~SVqY~D~~~~~ 333 (351)
...-+.+.+.|.+..++++.+-+ |+.++..- +. .....|.+|+-++|.|++++..++..+|.+.+.+.
T Consensus 73 ~~~~~~l~~~~~~~~~~~~~~y~~~G~~~~~~~~~~~~~~~~~~~~~~~~~G~G~~y~i~~~~~l~~ey~~~~~~~~~ 150 (171)
T d1qjpa_ 73 KAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTYSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDA 150 (171)
T ss_dssp EEEEEEEEEEEEEESSSSEEEEEEEEEEEEEEEEECSSSCEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEC-----
T ss_pred EEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCC
T ss_conf 888889999999853886069898616999988411445620468515679827999927997999999999625865
No 7
>d1fepa_ f.4.3.3 (A:) Ferric enterobactin receptor FepA {Escherichia coli [TaxId: 562]}
Probab=68.94 E-value=3.2 Score=18.47 Aligned_cols=61 Identities=13% Similarity=0.321 Sum_probs=32.3
Q ss_pred CCCCCCCCEEEEEEEEEEECEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEEECCCEEEEEE
Q ss_conf 400011211366435563110478604525404567678522778778888851591277898
Q gi|254780314|r 262 NSYYDKSKYSVFAGYKFDVAKSITISGGGQYFGDINKTGKDGWSAGISAKYMISSGLEAQASV 324 (351)
Q Consensus 262 NaYY~~SEWaVAAeYaikaTDKl~ITPG~QY~gd~~~sg~DaWk~GlTvDYqItegL~tK~SV 324 (351)
+.+.....|++.+++.++.+|+|.+++|+.|=. .... ...|..-+.+.|++.+.+.-+++.
T Consensus 392 ~~~~~~~~~~~y~~~~~~~~~~~~~~~G~R~d~-~~~~-~~~~~p~~~~~~~~~~~~~~~~~~ 452 (714)
T d1fepa_ 392 SPYSKAEIFSLFAENNMELTDSTIVTPGLRFDH-HSIV-GNNWSPALNISQGLGDDFTLKMGI 452 (714)
T ss_dssp CCEEEEEEEEEEEEEEEECSSSEEEEEEEEEEE-ETTT-EEEEEEEEEEEEECSTTEEEEEEE
T ss_pred CCCCHHCCCCHHHHHHCCCCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 663000000131200001232111123323211-1111-111221100012332111112233
No 8
>d3brda3 b.42.7.1 (A:381-541) DNA-binding protein LAG-1 (CSL) {Caenorhabditis elegans [TaxId: 6239]}
Probab=42.66 E-value=8.7 Score=15.72 Aligned_cols=29 Identities=24% Similarity=0.245 Sum_probs=17.4
Q ss_pred CCCCEEEECCCCCCCCCCEEEEEE-ECCCEEE
Q ss_conf 555102311222444332268998-2575451
Q gi|254780314|r 161 VYSPTTLYNDARGLDKMMSLSYRH-SFGLLKA 191 (351)
Q Consensus 161 IgS~~TL~Nd~rg~dk~~SirYqY-e~G~F~A 191 (351)
-||.+-|||-+|+|+- |-||.. |+|.|-|
T Consensus 8 sGs~VsLFNRlrSQTV--sTrYl~ve~~~f~a 37 (161)
T d3brda3 8 SGTKVALFNRLRSQTV--STRYLHVEGNAFHA 37 (161)
T ss_dssp TTSEEEEEECSTTCGG--GCEEEEEETTEEEE
T ss_pred CCCEEEEEEEECCCCC--CEEEEEECCCEEEE
T ss_conf 8999981641136200--11678853880698
No 9
>d1qj8a_ f.4.1.1 (A:) Outer membrane protein X (OMPX) {Escherichia coli [TaxId: 562]}
Probab=37.77 E-value=10 Score=15.23 Aligned_cols=29 Identities=14% Similarity=0.110 Sum_probs=26.1
Q ss_pred CCEEEEEEEEEEEEECCCEEEEEEEECCC
Q ss_conf 52277877888885159127789873274
Q gi|254780314|r 301 KDGWSAGISAKYMISSGLEAQASVAFNDN 329 (351)
Q Consensus 301 ~DaWk~GlTvDYqItegL~tK~SVqY~D~ 329 (351)
...|..|+=++|.|++++..++.-+|.|.
T Consensus 104 ~~g~~~G~Gvey~l~~n~~~~~eY~~~~~ 132 (148)
T d1qj8a_ 104 DYGFSYGAGLQFNPMENVALDFSYEQSRI 132 (148)
T ss_dssp EEEEEEEEEEEECSSTTEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEEECCCEEEEEEEEEEEC
T ss_conf 44446962179980688799999999747
No 10
>d1u8fo2 d.81.1.1 (O:152-315) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}
Probab=36.93 E-value=8.8 Score=15.70 Aligned_cols=64 Identities=22% Similarity=0.340 Sum_probs=35.5
Q ss_pred HHHHHCCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
Q ss_conf 222100112123430220010254212221120000111256312025666665410136877655433342000
Q gi|254780314|r 13 VATIISYSESFAYVRGKTSMVSNNRARNRSAGKVGNVLPHITKVGGSLEKSLQARYHKLNGNNEFNSLAYDIPVK 87 (351)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lng~~e~n~~~~d~~~~ 87 (351)
+.||-+|.-+-.-+.+.. +..+.|.|+|. .|..|+-|-....+++-|..--.||+| .++-.||-
T Consensus 24 mTTiHayT~~Q~l~D~~~---~~~~Rr~Raa~--~niIPttTgAakAv~~vlP~L~gkl~g------~a~RVPt~ 87 (164)
T d1u8fo2 24 MTTVHAITATQKTVDGPS---GKLWRDGRGAL--QNIIPASTGAAKAVGKVIPELNGKLTG------MAFRVPTA 87 (164)
T ss_dssp EEEEEECCTTSBSSSCCC---TTCGGGGSBTT--TCCEEEECCTTTTHHHHSGGGTTSEEE------EEEEESCS
T ss_pred EEEEECCCCCCCCCCCCC---CCCCCCCCCCC--CCCEECCCCHHHHHHHHCHHHCCCCCC------EEEECCCC
T ss_conf 876502538643113666---67653577776--731156522889999857411687430------38736877
No 11
>d1phoa_ f.4.3.1 (A:) Porin {Escherichia coli, different sequences [TaxId: 562]}
Probab=33.55 E-value=12 Score=14.81 Aligned_cols=238 Identities=14% Similarity=0.113 Sum_probs=112.3
Q ss_pred CCCEEEEEEEEEECCCHHCCCCCCCCHHEEEEECCCCCCCHHHHEEEH-----HHEEECCEEEECCC----CCCCCCCEE
Q ss_conf 686134999997422000000111210001210355551125200011-----00000122200244----445555102
Q gi|254780314|r 96 AGDVTGVAKLKLAVDDVLSMQFAESDVRALAFTVPSSKLSVEELSLSM-----KGARLGYYKSWSDE----VNPVYSPTT 166 (351)
Q Consensus 96 ~g~~tgv~~~~~~~d~~~~~~~~~~d~~a~~~~~~Ss~l~ldeayLdi-----~GfRaG~FySWWDE----tddIgS~~T 166 (351)
.+.++++.+|++.++-.- .+.+ +..+..+.+|+-+ +-+++|--++..++ +|+....-.
T Consensus 47 ~~gl~a~~~lE~~~~~~~----~~~~---------~~~~~~r~ayvGl~~~~~G~v~~Gr~~~~~~~~~~~~d~~~~~~~ 113 (330)
T d1phoa_ 47 NDQLTGYGRWEAEFAGNK----AESD---------TAQQKTRLAFAGLKYKDLGSFDYGRNLGALYDVEAWTDMFPEFGG 113 (330)
T ss_dssp SSSEEEEEEEEEEEESSS----CTTC---------CCCEEEEEEEEEEEETTTEEEEEEEEECSTHHHHTTTCCSSSCCS
T ss_pred CCCEEEEEEEEEEEECCC----CCCC---------CCCCCCCEEEEEEECCCCEEEEEECCCCHHEEEEEECCCCCCCCC
T ss_conf 898499999999897688----7666---------665543217999964786899974247600243210123444566
Q ss_pred ----EECCCCCCCCCCEEEEEEEC-C----CEEEEEEHHHC---CCCCCCCEEEEEEEEEEEECCEEEEEEEEEECCC--
Q ss_conf ----31122244433226899825-7----54510330321---4666654034788963454126899985221146--
Q gi|254780314|r 167 ----LYNDARGLDKMMSLSYRHSF-G----LLKAGLSTDLL---QKDGLKQVLGIGYMASYAIGKIRSTVTGGYDAGT-- 232 (351)
Q Consensus 167 ----L~Nd~rg~dk~~SirYqYe~-G----~F~AGiSvDeL---E~dg~~n~VGV~g~vsg~aGavS~qltGGyDtd~-- 232 (351)
..+....---=++|+|+... . .+..++...-- ++....+..+....+++..+.....+..+|....
T Consensus 114 ~~~~~~~~~~~~r~~~~i~y~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 193 (330)
T d1phoa_ 114 DSSAQTDNFMTKRASGLATYRNTDFFGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRT 193 (330)
T ss_dssp CSSCCTTSTTTSEEEEEEEEEEESTTTTCTTEEEEEEEECCBCSSCSTTCBCSEEEEEEEEEETTTTEEEEEEEEEEECC
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCC
T ss_conf 53223343334553653787322114520008999986024566664455676520135666216862677656404665
Q ss_pred ------------CCCEEEEEEEECCCCCCEEEEEEEEEC--CCCCC-----CCCCCEEEEEEEEEEECEEEEECCCEEEE
Q ss_conf ------------651279888613678820246788733--86400-----01121136643556311047860452540
Q gi|254780314|r 233 ------------NNVAIRANISSPVSRAGTLDCGAVWAS--GDNSY-----YDKSKYSVFAGYKFDVAKSITISGGGQYF 293 (351)
Q Consensus 233 ------------eeGAIRAl~ta~iG~PGTlglAgVwAS--gpNaY-----Y~~SEWaVAAeYaikaTDKl~ITPG~QY~ 293 (351)
..-++++-+.-+.+ + +.+++.|.. ..+.. .....|.+.+.|.+..+ +...-+.++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~a~Y~~~-~--~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~a~y~~~~~--~~~~~~~~~~ 268 (330)
T d1phoa_ 194 NEQNLQSRGTGKRAEAWATGLKYDAN-N--IYLATFYSETRKMTPITGGFANKTQNFEAVAQYQFDFG--LRPSLGYVLS 268 (330)
T ss_dssp GGGTTSSSSCSSEEEEEEEEEEEEET-T--EEEEEEEEEEESCSCCSSSSCSEEEEEEEEEEECCSSS--EEEEEEEEEE
T ss_pred CCCCCCCCCCCCEEEEEEEEEEEECC-E--EEEEEEEEEEEECCCCCCCCEEEEEEEEEEEEEEECCC--EEEEEEEEEE
T ss_conf 43233344554203368877799814-0--88886887754047766532021126999989840642--0467789998
Q ss_pred CCCC--C-CCCC-EEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCC
Q ss_conf 4567--6-7852-2778778888851591277898732742113542346631001101139
Q gi|254780314|r 294 GDIN--K-TGKD-GWSAGISAKYMISSGLEAQASVAFNDNFVKKGVAIDKGVDLSVGLKKSF 351 (351)
Q Consensus 294 gd~~--~-sg~D-aWk~GlTvDYqItegL~tK~SVqY~D~~~~~~~~~d~g~d~t~gl~~sf 351 (351)
..-+ . ...+ ....-|.++|++...+..-+..+|.+-=....-..++.+-..+||.--|
T Consensus 269 ~~~~~~~~~~~~~~~~~~vG~~Y~lsk~~~~yaey~~~~~d~~~~~~~~~~~~~~vGlr~~F 330 (330)
T d1phoa_ 269 KGKDIEGIGDEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDIVAVGMTYQF 330 (330)
T ss_dssp EEESBTTTBCCEEEEEEEEEEEEESSSSEEEEEEEEEECCCSSCTTCCCCCCEEEEEEEEEC
T ss_pred ECCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEC
T ss_conf 21355667887612899999999907998999999997145766577666889999999989
No 12
>d1te1b_ b.29.1.11 (B:) Xylanase II {Penicillium funiculosum [TaxId: 28572]}
Probab=33.52 E-value=10 Score=15.34 Aligned_cols=15 Identities=33% Similarity=0.552 Sum_probs=11.5
Q ss_pred HHEEECCEEEECCCC
Q ss_conf 000001222002444
Q gi|254780314|r 144 KGARLGYYKSWSDEV 158 (351)
Q Consensus 144 ~GfRaG~FySWWDEt 158 (351)
-|.--||||+||.+.
T Consensus 8 tG~~~Gy~y~~W~d~ 22 (190)
T d1te1b_ 8 TGTNNGYYYSFWTNG 22 (190)
T ss_dssp EEESSSCEEEEEECS
T ss_pred CEEECCEEEEEEECC
T ss_conf 263899999999779
No 13
>d2g82a2 d.81.1.1 (A:149-310) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}
Probab=27.35 E-value=5.1 Score=17.18 Aligned_cols=62 Identities=24% Similarity=0.395 Sum_probs=35.3
Q ss_pred HHHHCCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
Q ss_conf 22100112123430220010254212221120000111256312025666665410136877655433342000
Q gi|254780314|r 14 ATIISYSESFAYVRGKTSMVSNNRARNRSAGKVGNVLPHITKVGGSLEKSLQARYHKLNGNNEFNSLAYDIPVK 87 (351)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lng~~e~n~~~~d~~~~ 87 (351)
.||-+|.-+-.-+-+. ..+..|.|+|. .|..|+.|.....+++-+. .|+| .+...++-.||.
T Consensus 25 tTiH~~t~~Q~l~D~~----~~d~rr~Rsa~--~niIPt~Tgaakai~~vlP----~L~g--ki~g~a~RVPt~ 86 (162)
T d2g82a2 25 TTVHSYTNDQRLLDLP----HKDLRRARAAA--INIIPTTTGAAKATALVLP----SLKG--RFDGMALRVPTA 86 (162)
T ss_dssp EEEEECCTTSBSSSCC----CSSTTTTSBGG--GCCEEECCCHHHHHHHHCG----GGTT--SEEEEEEEESCS
T ss_pred EEECCCCCCCCCCCCC----CCCCCCCCHHH--CCCCCCCCCCCHHHCHHHH----HHCC--CCEEEEEEECCC
T ss_conf 7552152766357788----88866666043--1667665754400033567----5089--730589863036
No 14
>d2iwgb1 b.29.1.22 (B:4-182) 52 kDa Ro protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.14 E-value=17 Score=13.90 Aligned_cols=10 Identities=30% Similarity=0.796 Sum_probs=3.2
Q ss_pred EECCCCCCCC
Q ss_conf 7338640001
Q gi|254780314|r 257 WASGDNSYYD 266 (351)
Q Consensus 257 wASgpNaYY~ 266 (351)
|..|--++|+
T Consensus 127 ~e~G~lsFy~ 136 (179)
T d2iwgb1 127 YEAGMVSFYN 136 (179)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCEEEEEE
T ss_conf 2899899995
No 15
>d3cmco2 d.81.1.1 (O:149-312) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}
Probab=23.43 E-value=5.6 Score=16.93 Aligned_cols=62 Identities=23% Similarity=0.400 Sum_probs=34.6
Q ss_pred HHHHCCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
Q ss_conf 22100112123430220010254212221120000111256312025666665410136877655433342000
Q gi|254780314|r 14 ATIISYSESFAYVRGKTSMVSNNRARNRSAGKVGNVLPHITKVGGSLEKSLQARYHKLNGNNEFNSLAYDIPVK 87 (351)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lng~~e~n~~~~d~~~~ 87 (351)
.||-+|.-+-.-+-+.. .+..|.|+| ..|..|.-|.....+++-+. .|+| .+...++-.||.
T Consensus 25 TTvHa~T~~Q~l~D~~~----~d~Rr~Raa--~~niIPtsTgAakav~~vlP----~L~g--kl~g~a~RVPt~ 86 (163)
T d3cmco2 25 TTVHSYTNDQRILDLPH----KDLRRARAA--AESIIPTTTGAAKAVALVLP----ELKG--KLNGMAMRVPTP 86 (163)
T ss_dssp EEEEECCTTSBSSSCCC----SSTTTTSBT--TTCCEEEECSHHHHHHHHCG----GGTT--TEEEEEEEESCS
T ss_pred EEECCCCCCCCCCCCCC----CCHHCCCHH--HHCCCCCCCCHHHHHHHHHH----HHCC--CCCEEEEECCCC
T ss_conf 75514627465778777----420002067--61778766648899987548----7679--853589953778
No 16
>d1h4ga_ b.29.1.11 (A:) Xylanase II {Bacillus agaradhaerens [TaxId: 76935]}
Probab=21.97 E-value=13 Score=14.73 Aligned_cols=15 Identities=20% Similarity=0.290 Sum_probs=11.9
Q ss_pred HHEEECCEEEECCCC
Q ss_conf 000001222002444
Q gi|254780314|r 144 KGARLGYYKSWSDEV 158 (351)
Q Consensus 144 ~GfRaG~FySWWDEt 158 (351)
-|..-|+|||||.+.
T Consensus 8 ~G~~~Gy~Y~~W~d~ 22 (206)
T d1h4ga_ 8 IGNHDGYDYEFWKDS 22 (206)
T ss_dssp EEEETTEEEEEEECS
T ss_pred CEEECCEEEEEEECC
T ss_conf 666799888899479
No 17
>d2q03a1 b.159.2.1 (A:5-137) Uncharacterized protein Sden_2034 {Shewanella denitrificans [TaxId: 192073]}
Probab=21.44 E-value=20 Score=13.45 Aligned_cols=93 Identities=14% Similarity=0.035 Sum_probs=54.5
Q ss_pred EECCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCEEEEEEHHHCC----CCCCCCEEE---EEEEEEEEECCEEEEEE
Q ss_conf 00244445555102311222444332268998257545103303214----666654034---78896345412689998
Q gi|254780314|r 153 SWSDEVNPVYSPTTLYNDARGLDKMMSLSYRHSFGLLKAGLSTDLLQ----KDGLKQVLG---IGYMASYAIGKIRSTVT 225 (351)
Q Consensus 153 SWWDEtddIgS~~TL~Nd~rg~dk~~SirYqYe~G~F~AGiSvDeLE----~dg~~n~VG---V~g~vsg~aGavS~qlt 225 (351)
.=||| .|...+++.+.+..+ ++.|+|+++ +. |.|.-|.. .++...-|| +.|.+.++.|-|.+|-.
T Consensus 13 ~~W~E-----~~~~~~~~g~~l~ra-~v~k~~~Gd-l~-G~s~~~~l~~y~~~g~A~yvg~E~f~G~l~Gr~Gsfvlqh~ 84 (133)
T d2q03a1 13 TAWDE-----TSYFESDNGAKLTQA-VITQSYQGV-LQ-GHSEIRYLMSYQDNANATFVGFEHFTGSLGDKKGSFILQHK 84 (133)
T ss_dssp EEEEE-----EEEEECTTSCEEEEE-EEEEEECSS-EE-EEEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ECCCC-----CCCCCCCCCCCEEEE-EEEEEEEEE-EE-EEEEEEEEEEECCCCCEEEEEEEEEEEEECCCEEEEEEEEE
T ss_conf 45898-----764245688735899-999986326-77-89999999997289848899999999998990488999977
Q ss_pred EEEECCCCCCEEEEEEEECCCCCCEEEEEEEEE
Q ss_conf 522114665127988861367882024678873
Q gi|254780314|r 226 GGYDAGTNNVAIRANISSPVSRAGTLDCGAVWA 258 (351)
Q Consensus 226 GGyDtd~eeGAIRAl~ta~iG~PGTlglAgVwA 258 (351)
|-+|... .+.-.++--+ -||=.|+++--
T Consensus 85 G~~~~g~----~~~~~~IVpg-SgTGeL~Gl~G 112 (133)
T d2q03a1 85 GLFAAGV----ASSEFELVER-SATGDFVHLVG 112 (133)
T ss_dssp EEEETTE----EEEEEEECTT-CCEETTTTEEE
T ss_pred EEECCCC----EEEEEEEECC-CCCCCCCCCEE
T ss_conf 5882883----2177999757-87730057377
Done!