BLAST/PSIBLAST alignment of GI: 254780314 and GI: 116252521 at iteration 1
>gi|116252521|ref|YP_768359.1| outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 340
>gi|115257169|emb|CAK08264.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 340
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 47/293 (16%)
Query: 55 KVGGSLEKSLQARYHKLNGNNEFNSLAYDIPVKGNLEVNANA----GDVTGVAKLKLAVD 110
K+ G + + LNG+ E N +D +G ++ A + G +TGV ++ D
Sbjct: 58 KIEGYIRFQVDVGDQPLNGS-ESNDSDWDARTRGQVQFTAKSDTEYGPLTGVIVMQFNAD 116
Query: 111 DVLSMQFAESDVRALAFTVPSSKLSVEELSLSMKGARLGYYKSWSD-----EVNPVYSPT 165
+ +D A+ ++ L + G R G + SW D E + + S
Sbjct: 117 NA-------TDQDAI----------LDSAYLDVAGFRAGLFYSWWDDGLSGETDDIGSIV 159
Query: 166 TLYNDARGLDKMMSLSYRHSFGLLKAGLSTDLLQK-----DGLKQVLGIGYMASYAIGKI 220
TL+N SL Y++ G AG+S D L+ D +G+ + G
Sbjct: 160 TLHN---------SLRYQYESGTFYAGISVDELEDGFYKSDEEPNNVGVAFGVGGTAGAF 210
Query: 221 RSTVTGGYDAGTNNVAIRANISSPVSRAGTLDCGAVWASGDNSYYDKSKYSVFAGYKFDV 280
+TGG+D + AIRA + + GTL AV++SG NSYY ++++V A Y
Sbjct: 211 SYQITGGWDFDNEDGAIRAMGTVDIG-PGTLGLAAVYSSGPNSYYSAAEWAVAAEYAIKA 269
Query: 281 AKSITISGGGQYFGDI-----NKTGKDGWSAGISAKYMISSGLEAQASVAFND 328
+ I+ G QY+GD + +G D W G++ Y I A+ASV + D
Sbjct: 270 TDKLKITPGVQYYGDYYVDGDDFSGGDAWKVGLTVDYQIVDNFYAKASVQYLD 322