HHsearch alignment for GI: 254780316 and conserved domain: CHL00192

>CHL00192 syfB phenylalanyl-tRNA synthetase beta chain; Provisional.
Probab=100.00  E-value=0  Score=1456.71  Aligned_cols=676  Identities=28%  Similarity=0.464  Sum_probs=601.3

Q ss_pred             CCCCHHHHHHHCCCC-CCHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEECCC
Q ss_conf             977867998847899-9889999998745860421112465687489999997565799870899975999579897548
Q gi|254780316|r    1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGA   79 (805)
Q Consensus         1 M~is~~WL~~~v~~~-~~~~~l~~~lt~~G~EVe~i~~~~~~~~vvvg~v~~~~~hP~adl~v~~Vd~g~~~~~~IvcgA   79 (805)
T Consensus         1 m~~~~~wl~~~~~~~~~~~~~l~~~lt~~g~~~e~~~~~~----------------------------------------   40 (702)
T CHL00192          1 MKVSLNWLKELVDIENIDFDTLVDKLSLAGFEVEDIERLS----------------------------------------   40 (702)
T ss_pred             CCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHC----------------------------------------
T ss_conf             9476899998638779998999998744476533102221----------------------------------------


Q ss_pred             CCCCCCCEEEEECCCCEECCCCEEEEEEHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCEEEEE
Q ss_conf             34558978989668779258983983312058650545411887699854775078168888884558870888559998
Q gi|254780316|r   80 PNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDV  159 (805)
Q Consensus        80 ~Nv~~g~~V~~A~~Ga~lp~g~~~i~~~~irGv~S~GMlCS~~ELgl~~~~~gI~~l~~~~~~G~~~~~~l~l~D~i~ei  159 (805)
T Consensus        41 ---------------------------------------------------------------------~lgldD~vlei   51 (702)
T CHL00192         41 ---------------------------------------------------------------------ILGEKDMILDV   51 (702)
T ss_pred             ---------------------------------------------------------------------CCCCCCEEEEE
T ss_conf             ---------------------------------------------------------------------06899868997


Q ss_pred             EECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf             70878576655578999877641156666554566777777741589840731112332011232245566377878888
Q gi|254780316|r  160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK  239 (805)
Q Consensus       160 ~iTpNR~D~ls~~GiARElaa~~~~~l~~~~~~~~~~~~~~~~~i~v~i~~~~~c~~y~~~~i~~v~~~~SP~wl~~rL~  239 (805)
T Consensus        52 ~iTPNR~DclS~~GiARElaa~~~~~l~~p~~~~~~~~~~~~~-~~~~~~~~~~c~~y~~~~i~~v~v~~SP~wl~~rL~  130 (702)
T CHL00192         52 TSTANRSDSLSIIGLSREISALTNRDLKYKAYKPSIAIFTHKI-TILSSHSLLNCGIYSIVIIDNLRVNDSPLWLQNRLS  130 (702)
T ss_pred             EECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-EEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH
T ss_conf             5598778988889999999997598988856577643346761-230245545787388999878736899799999999


Q ss_pred             HHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC-------EEEEEECCCCCCHHHHHHHCCCCCCCCEEEECCCCCCC
Q ss_conf             64013210399999899986087000001022333-------26886235543114554201124543200002567631
Q gi|254780316|r  240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-------VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQS  312 (805)
Q Consensus       240 ~~Gir~inniVDitNyvmle~GqPlHafD~dki~~-------~i~vr~a~~~E~~~~Ld~~e~~L~~~~lvI~d~~~~ia  312 (805)
T Consensus       131 ~~Gir~inniVDitNYvmle~GqPlHAfD~dki~~~~~~~~~~i~vr~a~~~e~~~~Ld~~e~~L~~~~lvI~d~~~~ia  210 (702)
T CHL00192        131 SSGIKPLNLLVDISNYIMLKWGQPINIFDLDKISSVPIQPSLLILSNFNLGKSSHFILDNPNIKLSSEILLVQYNDNPIS  210 (702)
T ss_pred             HCCCCCCCCCCCHHHHHHHHCCCCCEEECHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCEEECCCCCEEEEECCEEEE
T ss_conf             86998654334666633343088618973889368766664048997057985588238867854888779981992588


Q ss_pred             CHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCE
Q ss_conf             00111355312013672699997157878887788761654015544134553013588999888752123345556525
Q gi|254780316|r  313 IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC  392 (805)
Q Consensus       313 laGImGg~~s~v~~~T~~illEsA~F~p~~Ir~tar~l~l~TdaS~RfERgvd~~~~~~al~r~~~Li~e~~gg~~~~~~  392 (805)
T Consensus       211 lAGVmGG~~s~V~~~T~~IllEsA~F~p~~Ir~tar~l~l~tdaS~RfERGvdp~~~~~al~ra~~Li~e~~~g~~~~~~  290 (702)
T CHL00192        211 IAGIGLNSEIDCDANTKSILIEGAIFSKQVVRKSSRKLGIRTESSIRQEKGLNRDNFLNALYEAISLLGELTFGKIGKTF  290 (702)
T ss_pred             ECCEECCCCCEEECCHHHHHHHHEECCHHHHHHHHHHHCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCEECCCE
T ss_conf             72060786533505604614544215779989999983677514233246899789999999999999987398442203


Q ss_pred             EEEECCCCCCCEECCCCHHHHHHC--------CCCCHHHHHHHHHHHHHHHHCC-CCCCEEEECCCCC-CCCCHHHHHHH
Q ss_conf             874135543100004311333311--------3458789999999840222103-4562366403454-33440256767
Q gi|254780316|r  393 IARNITYKPRKIVFMNSEVKRLSG--------IDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQ-DVEEKADLVEE  462 (805)
Q Consensus       393 ~~~~~~~~~~~I~l~~~~i~~ilG--------~~i~~~ei~~iL~~Lgf~v~~~-~~~~~V~vPs~R~-DI~~e~DLiEE  462 (805)
T Consensus       291 ~~~~~~~~~~~i~~~~~~i~~~lG~~~~~~~~~~i~~~~i~~iL~~Lgf~v~~~~~~~~~V~vPs~R~~DI~~e~DLiEE  370 (702)
T CHL00192        291 GYHKLTNISKPINLSKKKIQDILGPIKINGSTRYLSFEEIENILKSLNFKLIYDSLKNWEVIIPSYRQDDIFREIDLIEE  370 (702)
T ss_pred             ECCCCCCCCCEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEEEECCCCCHHHHCCCCHHHHH
T ss_conf             12556777850775899999973976445655568999999999977998995478868998897566664771059999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             67653523346676554434576789988954678988787787740232100482576552000000002467764321
Q gi|254780316|r  463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMS  542 (805)
Q Consensus       463 IaRiyGYdnIp~~~l~~~~~~~~~~~~~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~~~~~~~~~i~l~NPlS~e~s  542 (805)
T Consensus       371 VaRiyGydnI~~~-~p~~~--~~~~~~~~~~~~~~lr~~L~~~Gf~E~itysf~s~~~~-----~~~~v~l~NPis~e~s  442 (702)
T CHL00192        371 IARLYGFDNFISK-LPLIQ--FDGRLSFLRNFIDKIRSLLRNLGLTELVHYSLVKSYTY-----YKGEIKLYNPLLQDYS  442 (702)
T ss_pred             HHHHHCCCCCCCC-CCCCC--CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHC-----CCCCEEECCCCCHHHH
T ss_conf             9998080336555-78754--67888988999999999999689834775314684445-----6772897087524378


Q ss_pred             CCCCHHHCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC--CCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             0151221106776432101586113454302444477754--43100022103543101246202345443333146888
Q gi|254780316|r  543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE--GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFD  620 (805)
Q Consensus       543 ~lR~SLlp~LL~~~~~N~~r~~~~i~lFEiG~Vf~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~d  620 (805)
T Consensus       443 ~LR~sLlpgLL~~~~~N~~r~~~~i~lFEiG~vf~~~~~~~~e~~~l~~~~~--------~g~~~~~~w~~~~~~~dFfd  514 (702)
T CHL00192        443 TLRSSLLPGLILAQQYNLKQSNQTIEGFEIGHVFRDNTEKIFETLHLAGGIG--------GGLDIRSSWSEKAQSLNWYE  514 (702)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHEEEEEEE--------CCCCCCCCCCCCCCCCCHHH
T ss_conf             8888779999999986153599774289764552688788621122999998--------18866544456677678999


Q ss_pred             HHHHHHHHHHHCCCCCC---EEEECCCCCCCCCCCEEEEEECCEEEEEEEEEECHHHHHHCCCCCCEEEEEEEHHHHHHH
Q ss_conf             75311111110145333---033058865678981699998792999998547789999668799789999878762354
Q gi|254780316|r  621 AKADALSVIEPFVSLDS---LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS  697 (805)
Q Consensus       621 lKg~v~~ll~~l~~~~~---~~~~~~~~~~~hPgrsa~I~~~gk~iiG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~~~  697 (805)
T Consensus       515 ~Kg~ve~ll~~l~~~~~~~~~~~~~~~~~~~hPg~sA~I~~~~~~i-G~iG~lhP~v~~~~~l~~~v~~~Eidl~~l~~~  593 (702)
T CHL00192        515 AKGIVEEFFQRLNLPIVWKKIDSLDQRNKFLHPGRSAEIIYNNENI-GIFGQLHPLLASNLGLNTSTYLFEFDLEKLQAS  593 (702)
T ss_pred             HHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCEEEEEECCEEE-EEEEEECHHHHHHCCCCCCEEEEEEEHHHHHHH
T ss_conf             9999999999818984200201455542334877548999999799-999998799998739999779999997994323


Q ss_pred             HHCCCC-CCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCC-CCEEEEEEEEEEECCCCCCCCEEEEEEEEEECCC
Q ss_conf             520245-66313689888720018999668879999999997111-0035769898763677998842699999984779
Q gi|254780316|r  698 QKKRTK-TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK  775 (805)
Q Consensus       698 ~~~~~~-~~~~~~~s~fP~v~RDls~iv~~~v~~~~I~~~i~~~~-~ll~~v~lfDvY~g~~i~~gkkSla~rl~fqs~~  775 (805)
T Consensus       594 ~~~~~~~~~~~~~~skfP~v~RDlalvv~~~v~~~~I~~~I~~~~~~ll~~v~lfDvY~g~~i~~gkKSla~~l~fq~~~  673 (702)
T CHL00192        594 IEQLNYLNYIIQPYSKYPSITRDLSLIIPKNMTISFLLKLILQFGNNLLESITLFDQYKGKSIGEGKKSLGLRLTYRSNK  673 (702)
T ss_pred             HHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCC
T ss_conf             44304466656778999970068999989999799999999862924171788999857999899966999999998989


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCEEC
Q ss_conf             8889999999999999999999511981
Q gi|254780316|r  776 DTFRDDDIRILMDRIVENVVKKTNAVLR  803 (805)
Q Consensus       776 kTLtd~EI~~i~~~ii~~l~~k~ga~LR  803 (805)
T Consensus       674 rTLtd~eV~~~~~kIi~~l~~k~~a~LR  701 (702)
T CHL00192        674 KTLTNKEIDRIQNELQKNLLKQLQLVLR  701 (702)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCEEC
T ss_conf             9969999999999999999998593867