HHsearch alignment for GI: 254780316 and conserved domain: CHL00192

Probab=91.13  E-value=0.23  Score=28.85  Aligned_cols=68  Identities=18%  Similarity=0.225  Sum_probs=32.0

Q ss_pred             CEEEEEECCEEEEEEEEEECHHHHHH-CCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEE----EEEEE-C
Q ss_conf             16999987929999985477899996-687997899998787623545202456631368988872001----89996-6
Q gi|254780316|r  652 RSGIIKTSAEIVLGYFGEFHPNILDF-FGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRD----LAFIV-D  725 (805)
Q Consensus       652 rsa~I~~~gk~iiG~iG~ihP~i~~~-~~i~~~v~~~EI~ld~L~~~~~~~~~~~~~~~~s~fP~v~RD----ls~iv-~  725 (805)
T Consensus       615 RDlalvv~~~v---~~~~I~~~I~~~~~~ll~~v~lfDvY~g~------------------~i~~gkKSla~~l~fq~~~  673 (702)
T CHL00192        615 RDLSLIIPKNM---TISFLLKLILQFGNNLLESITLFDQYKGK------------------SIGEGKKSLGLRLTYRSNK  673 (702)
T ss_pred             EEEEEEECCCC---CHHHHHHHHHHCCCCCEEEEEEEEEECCC------------------CCCCCCEEEEEEEEEECCC
T ss_conf             68999989999---79999999986292417178899985799------------------9899966999999998989


Q ss_pred             CCCCHHHHHHHHHHC
Q ss_conf             887999999999711
Q gi|254780316|r  726 QHIPAGTLVNIIKNV  740 (805)
Q Consensus       726 ~~v~~~~I~~~i~~~  740 (805)
T Consensus       674 rTLtd~eV~~~~~kI  688 (702)
T CHL00192        674 KTLTNKEIDRIQNEL  688 (702)
T ss_pred             CCCCHHHHHHHHHHH
T ss_conf             996999999999999