HHsearch alignment for GI: 254780316 and conserved domain: COG0072
>COG0072 PheT Phenylalanyl-tRNA synthetase beta subunit [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=1199.64 Aligned_cols=643 Identities=38% Similarity=0.626 Sum_probs=587.6
Q ss_pred CCCCHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEC-CCHHHHHHHC
Q ss_conf 884558870888559998708785766555789998776411566665545667777777415898407-3111233201
Q gi|254780316|r 142 VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMC 220 (805)
Q Consensus 142 ~G~~~~~~l~l~D~i~ei~iTpNR~D~ls~~GiARElaa~~~~~l~~~~~~~~~~~~~~~~~i~v~i~~-~~~c~~y~~~ 220 (805)
T Consensus 1 ~g~~~~~~~~L~d~i~e~~~tpnr~D~ls~~GiarE~aa~~~~~~~~~~~~d~~~~~~~~~~~~v~ie~~~~~~~~~~~~ 80 (650)
T COG0072 1 MPTIVREYLDLDDLIIEISITPNRADCLSMLGIARELAAEYDLKLEFPKIRDLESAEGLARKIFLEIEAGKYACPRYAGR 80 (650)
T ss_pred CCCCHHHHHHHCCCCEECCCCCCHHHHHCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEE
T ss_conf 98522545553453112336778788612255253304541761225776643344455614787334550117765359
Q ss_pred CCCCCC-CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCCC
Q ss_conf 123224-5566377878888640132103999998999860870000010223332688623554311455420112454
Q gi|254780316|r 221 CVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 (805)
Q Consensus 221 ~i~~v~-~~~SP~wl~~rL~~~Gir~inniVDitNyvmle~GqPlHafD~dki~~~i~vr~a~~~E~~~~Ld~~e~~L~~ 299 (805)
T Consensus 81 ~i~~v~~~~~sP~~~~~~l~~~gir~in~lVDitnyv~l~~Gqp~h~~d~~~~~~~i~vr~a~~~e~~~~ld~~~~~l~~ 160 (650)
T COG0072 81 VIKGVKVNAPSPLWLQARLRGVGIRPINNLVDITNYVHLELGQPRHAFDIGKIDGKIPVRYAKEGETLVFLDGKERELLT 160 (650)
T ss_pred EEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCCCCEEECCCCCEEECC
T ss_conf 99856568899889999998779970779999999999996897146446443787368973578735863885335368
Q ss_pred CCEEEECCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 32000025676310011135531201367269999715787888778876165401554413455301358899988875
Q gi|254780316|r 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSL 379 (805)
Q Consensus 300 ~~lvI~d~~~~ialaGImGg~~s~v~~~T~~illEsA~F~p~~Ir~tar~l~l~TdaS~RfERgvd~~~~~~al~r~~~L 379 (805)
T Consensus 161 ~~~vi~d~~~~~alagv~g~~~s~~~~~t~d~~~E~a~f~Pi~i~~~~r~l~~~T~~~~r~~rGvD~~~v~~al~~~~~l 240 (650)
T COG0072 161 GDLVIADHEKGLALAGVMGGADSEVDPNTTDVLLEVASFPPIIISKTSRRLGLDTEASFRFERGVDPELVEKALNRATTL 240 (650)
T ss_pred CCEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEEEEECCHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 87899837974455346413556878440230336785476888751451257850268871279989999999999999
Q ss_pred HCCCCCCCCCCCEEEEEC--CCCCCCEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHH
Q ss_conf 212334555652587413--554310000431133331134587899999998402221034562366403454334402
Q gi|254780316|r 380 ILSLCGGTASDICIARNI--TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKA 457 (805)
Q Consensus 380 i~e~~gg~~~~~~~~~~~--~~~~~~I~l~~~~i~~ilG~~i~~~ei~~iL~~Lgf~v~~~~~~~~V~vPs~R~DI~~e~ 457 (805)
T Consensus 241 l~e~~gg~v~~~~~~~~~~~~~~~~~i~~~~~~i~~llG~~ls~eei~~iL~rLg~~~~~~~~~~~V~vPs~R~DI~~e~ 320 (650)
T COG0072 241 LAEICGGEVSSVVIVGGDEKLTPPRKIELRLERINRLLGLELSAEEIEKILKRLGFKVEVKGDGLTVTVPSYRVDILIEA 320 (650)
T ss_pred HHHHCCCEEEEEEEECCCCCCCCCCEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCCCEEEECCCCCCCCCCCC
T ss_conf 99862985514899457766788844871899999986898899999999997699034168746997688721356532
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH-HCCCCCC
Q ss_conf 567676765352334667655443457678998895467898878778774023210048257655200000-0002467
Q gi|254780316|r 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR-ELEILNP 536 (805)
Q Consensus 458 DLiEEIaRiyGYdnIp~~~l~~~~~~~~~~~~~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~~~~~~~~-~i~l~NP 536 (805)
T Consensus 321 DliEEv~r~yGy~ni~~~~p~~~~~~~~-~~~~~~~~~r~vr~~l~~~G~~Evitysl~s~e~~~~~~~~~~~~~~l~NP 399 (650)
T COG0072 321 DLIEEVARIYGYNNIPPELPSAFTIGRG-GLTPLQKFRRKVRRALVGLGFQEVITYSLTSPEEAKLFGLENDEALELANP 399 (650)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCEEECCC
T ss_conf 7888999985714488758765445666-656678999999999985897599861258989999742377752685686
Q ss_pred CCCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC-CCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7643210151221106776432101586113454302444477754-431000221035431012462023454433331
Q gi|254780316|r 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 (805)
Q Consensus 537 lS~e~s~lR~SLlp~LL~~~~~N~~r~~~~i~lFEiG~Vf~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 615 (805)
T Consensus 400 iS~e~s~mR~sLlp~LL~~~~~N~~r~~~~~~iFEiG~v~~~~~~~~~~~~~~~~l~~g~~--------~~~~w~~~-~~ 470 (650)
T COG0072 400 ISEEYSVLRTSLLPGLLEALSYNKNRKNPDVRIFEIGDVFVKDEEAERETRHLAGLAAGLA--------GEESWQGK-RP 470 (650)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHCCC--------CCCCCCCC-CC
T ss_conf 7623888887778889999998753368864688667457058865320278999874446--------43334556-76
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCEEEEEEEEEECHHHHHHCCCCCCEEEEEEEHHHHH
Q ss_conf 46888753111111101453330330588656789816999987929999985477899996687997899998787623
Q gi|254780316|r 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 (805)
Q Consensus 616 ~df~dlKg~v~~ll~~l~~~~~~~~~~~~~~~~hPgrsa~I~~~gk~iiG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~ 695 (805)
T Consensus 471 v~f~d~Kg~ve~ll~~lg~--~~~~~~~~~~~~hpgrsA~I~~~~-~~iG~iGeiHP~vl~~~dl~~~~~~fEi~l~~l~ 547 (650)
T COG0072 471 VDFYDAKGDLEALLEALGV--EYEFEPAEHPAFHPGRSAAIYLNK-EVIGFIGELHPEVLKEFDLPGPVYVFEIDLDALL 547 (650)
T ss_pred CCHHHHHHHHHHHHHHCCC--CCEEEECCCCCCCCCCCEEEEECC-EEEEEEEEECHHHHHHCCCCCCCEEEEEEHHHHC
T ss_conf 4699999999999997299--727840556751368607999999-8889988876999987599888189997134424
Q ss_pred HHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCC-CCEEEEEEEEEEECCCCCCCCEEEEEEEEEECC
Q ss_conf 5452024566313689888720018999668879999999997111-003576989876367799884269999998477
Q gi|254780316|r 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 (805)
Q Consensus 696 ~~~~~~~~~~~~~~~s~fP~v~RDls~iv~~~v~~~~I~~~i~~~~-~ll~~v~lfDvY~g~~i~~gkkSla~rl~fqs~ 774 (805)
T Consensus 548 -----~~~~~~~~~~s~~pa~~RDia~~v~~~v~~~~i~~~i~~~~~~~l~~v~lfDvy~-~~~~~~~ks~a~~~~~~~~ 621 (650)
T COG0072 548 -----KRKKPAYKPISKFPAVRRDIALVVDEDVPAGDIVKAIKKAGGKLLESVNLFDVYQ-KGLGEGKKSLAIRLTFQDP 621 (650)
T ss_pred -----CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEEEE-CCCCCCCEEEEEEEEEECC
T ss_conf -----4446567888989854330699968999989999999983636689999999850-2578996689999999889
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCEEC
Q ss_conf 98889999999999999999999511981
Q gi|254780316|r 775 KDTFRDDDIRILMDRIVENVVKKTNAVLR 803 (805)
Q Consensus 775 ~kTLtd~EI~~i~~~ii~~l~~k~ga~LR 803 (805)
T Consensus 622 ~rTLtdeev~~~~~~~~~~l~~~~~~~lr 650 (650)
T COG0072 622 ERTLTDEEVNALVNKIVEALKEKFGAELR 650 (650)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCEEC
T ss_conf 88888799999999999999998484709