HHsearch alignment for GI: 254780316 and conserved domain: COG0073
>COG0073 ARC1 EMAP domain [General function prediction only].
Probab=99.95 E-value=5.2e-28 Score=217.96 Aligned_cols=120 Identities=38% Similarity=0.591 Sum_probs=110.5
Q ss_pred HHHCCCEEEEEECCC-CCCCEEEEEEEEEEECCCCC-CCEEEEECCCCC-EEEEECCCCCCCCCCEEEEECCCCEECCCC
Q ss_conf 874586042111246-56874899999975657998-708999759995-798975483455897898966877925898
Q gi|254780316|r 25 LTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENN 101 (805)
Q Consensus 25 lt~~G~EVe~i~~~~-~~~~vvvg~v~~~~~hP~ad-l~v~~Vd~g~~~-~~~IvcgA~Nv~~g~~V~~A~~Ga~lp~g~ 101 (805)
T Consensus 1 ~~~~~~e~e~i~~~~~~~~~l~vg~V~~~~~~p~adkL~~~~Vd~G~~~~~~qiv~G~~n~~~~~~vv~a~v~~v~~-~~ 79 (123)
T COG0073 1 LTRIGLEVEEIEIDDFAKVDLRVGKVVEAEPHPNADKLLVLKVDLGDEKEPRQIVCGAPNFYAGEKLVGAKVGAVLN-GG 79 (123)
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEEEEC-CC
T ss_conf 96322234411115444378189999981258997835799998089883789983362203761235377999976-77
Q ss_pred EEEEEEHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCH
Q ss_conf 398331205865054541188769985477507816888888455
Q gi|254780316|r 102 MIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 (805)
Q Consensus 102 ~~i~~~~irGv~S~GMlCS~~ELgl~~~~~gI~~l~~~~~~G~~~ 146 (805)
T Consensus 80 -~ikp~klrG~~S~GMics~~e~~~~~~~~~il~~~~~~~~g~~~ 123 (123)
T COG0073 80 -KLKPAKLRGVESEGMLLSAEELGLSDENVGILTLDEGVPPGTKV 123 (123)
T ss_pred -CCCCCEECCCEECEEEEECCCCCCCCCCCEEEECCCCCCCCCCC
T ss_conf -41632036830021798652388864456369678777888889