HHsearch alignment for GI: 254780316 and conserved domain: COG2024
>COG2024 Phenylalanyl-tRNA synthetase alpha subunit (archaeal type) [Translation, ribosomal structure and biogenesis].
Probab=97.55 E-value=7.8e-05 Score=53.52 Aligned_cols=179 Identities=17% Similarity=0.272 Sum_probs=121.4
Q ss_pred CCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 00246776432101512211067764321015861134543024444777544310002210354310124620234544
Q gi|254780316|r 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSE 610 (805)
Q Consensus 531 i~l~NPlS~e~s~lR~SLlp~LL~~~~~N~~r~~~~i~lFEiG~Vf~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 610 (805)
T Consensus 173 fk~Lkp~s~-tlTLRSHMTsGWFItLs~i~~r~~~PlklFSIDRCFRREQ~ED~shLmtYh--------------SASCV 237 (536)
T COG2024 173 FKDLKPESS-TLTLRSHMTSGWFITLSEILKREDPPLKLFSIDRCFRREQREDASHLMTYH--------------SASCV 237 (536)
T ss_pred HHHCCCCCC-CEEHHHHCCCCEEEEHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHHHHHHC--------------CCEEE
T ss_conf 763577777-505666334310135798872348984164256776655310156664320--------------34079
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECC--CCCCCCCCCEEEEEEC-------------CEEEEEEEEEECHHHH
Q ss_conf 333314688875311111110145333033058--8656789816999987-------------9299999854778999
Q gi|254780316|r 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRFESG--APSWYHPGRSGIIKTS-------------AEIVLGYFGEFHPNIL 675 (805)
Q Consensus 611 ~~~~~~df~dlKg~v~~ll~~l~~~~~~~~~~~--~~~~~hPgrsa~I~~~-------------gk~iiG~iG~ihP~i~ 675 (805)
T Consensus 238 vvde~vtvD~GKaVAEglL~qfGFe-~F~FrpDEK~SKYYvP~TQTEVyAyHPkL~gs~~kysdgWiEiATFGlYSP~AL 316 (536)
T COG2024 238 VVDEDVTVDDGKAVAEGLLRQFGFE-KFRFRPDEKKSKYYVPGTQTEVYAYHPKLVGSIEKYSDGWIEIATFGLYSPIAL 316 (536)
T ss_pred EECCCCCCCCCHHHHHHHHHHHCCC-CEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHH
T ss_conf 9758644354389999999971940-035466200355347996304777454003652125887089996035672779
Q ss_pred HHCCCCCCEEEEEEEHHHHHHHHHCC--CCCCCCCCCCCCCCCEEEEEEEEC
Q ss_conf 96687997899998787623545202--456631368988872001899966
Q gi|254780316|r 676 DFFGLSNPICGFEVYLDSIPISQKKR--TKTKKVVHLSSLHPVKRDLAFIVD 725 (805)
Q Consensus 676 ~~~~i~~~v~~~EI~ld~L~~~~~~~--~~~~~~~~~s~fP~v~RDls~iv~ 725 (805)
T Consensus 317 aeY~Id~pVMNLGlGVERlaMIl~g~~DVR~mvYpqi~ew~lSD~diA~mi~ 368 (536)
T COG2024 317 AEYGIDYPVMNLGLGVERLAMILHGADDVRSMVYPQIYEWRLSDRDIARMIR 368 (536)
T ss_pred HHCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 8729997012032208999999817447766513453445666588886640