HHsearch alignment for GI: 254780316 and conserved domain: COG2024

>COG2024 Phenylalanyl-tRNA synthetase alpha subunit (archaeal type) [Translation, ribosomal structure and biogenesis].
Probab=97.55  E-value=7.8e-05  Score=53.52  Aligned_cols=179  Identities=17%  Similarity=0.272  Sum_probs=121.4

Q ss_pred             CCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf             00246776432101512211067764321015861134543024444777544310002210354310124620234544
Q gi|254780316|r  531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSE  610 (805)
Q Consensus       531 i~l~NPlS~e~s~lR~SLlp~LL~~~~~N~~r~~~~i~lFEiG~Vf~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  610 (805)
T Consensus       173 fk~Lkp~s~-tlTLRSHMTsGWFItLs~i~~r~~~PlklFSIDRCFRREQ~ED~shLmtYh--------------SASCV  237 (536)
T COG2024         173 FKDLKPESS-TLTLRSHMTSGWFITLSEILKREDPPLKLFSIDRCFRREQREDASHLMTYH--------------SASCV  237 (536)
T ss_pred             HHHCCCCCC-CEEHHHHCCCCEEEEHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHHHHHHC--------------CCEEE
T ss_conf             763577777-505666334310135798872348984164256776655310156664320--------------34079


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECC--CCCCCCCCCEEEEEEC-------------CEEEEEEEEEECHHHH
Q ss_conf             333314688875311111110145333033058--8656789816999987-------------9299999854778999
Q gi|254780316|r  611 ERCRFVDLFDAKADALSVIEPFVSLDSLRFESG--APSWYHPGRSGIIKTS-------------AEIVLGYFGEFHPNIL  675 (805)
Q Consensus       611 ~~~~~~df~dlKg~v~~ll~~l~~~~~~~~~~~--~~~~~hPgrsa~I~~~-------------gk~iiG~iG~ihP~i~  675 (805)
T Consensus       238 vvde~vtvD~GKaVAEglL~qfGFe-~F~FrpDEK~SKYYvP~TQTEVyAyHPkL~gs~~kysdgWiEiATFGlYSP~AL  316 (536)
T COG2024         238 VVDEDVTVDDGKAVAEGLLRQFGFE-KFRFRPDEKKSKYYVPGTQTEVYAYHPKLVGSIEKYSDGWIEIATFGLYSPIAL  316 (536)
T ss_pred             EECCCCCCCCCHHHHHHHHHHHCCC-CEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHH
T ss_conf             9758644354389999999971940-035466200355347996304777454003652125887089996035672779


Q ss_pred             HHCCCCCCEEEEEEEHHHHHHHHHCC--CCCCCCCCCCCCCCCEEEEEEEEC
Q ss_conf             96687997899998787623545202--456631368988872001899966
Q gi|254780316|r  676 DFFGLSNPICGFEVYLDSIPISQKKR--TKTKKVVHLSSLHPVKRDLAFIVD  725 (805)
Q Consensus       676 ~~~~i~~~v~~~EI~ld~L~~~~~~~--~~~~~~~~~s~fP~v~RDls~iv~  725 (805)
T Consensus       317 aeY~Id~pVMNLGlGVERlaMIl~g~~DVR~mvYpqi~ew~lSD~diA~mi~  368 (536)
T COG2024         317 AEYGIDYPVMNLGLGVERLAMILHGADDVRSMVYPQIYEWRLSDRDIARMIR  368 (536)
T ss_pred             HHCCCCCCEEECCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf             8729997012032208999999817447766513453445666588886640