HHsearch alignment for GI: 254780316 and conserved domain: COG2517

>COG2517 Predicted RNA-binding protein containing a C-terminal EMAP domain [General function prediction only].

Probab=98.98  E-value=1.3e-09  Score=87.52  Aligned_cols=68  Identities=26%  Similarity=0.397  Sum_probs=61.6

Q ss_pred             CCEEEEEEEEEEECCCCC-CCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCEECCCCEEEEEEHHCCCCCCCHHHH
Q ss_conf             874899999975657998-7089997599957989754834558978989668779258983983312058650545411
Q gi|254780316|r   42 SPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS  120 (805)
Q Consensus        42 ~~vvvg~v~~~~~hP~ad-l~v~~Vd~g~~~~~~IvcgA~Nv~~g~~V~~A~~Ga~lp~g~~~i~~~~irGv~S~GMlCS  120 (805)
T Consensus       120 V~~vvGEV~Sv~~hp~aD~L~v~vvn~G~-r~~tVVTN~~~vreg~~vaVAl----LP-------Pr~F~gvvSeGMFlg  187 (219)
T COG2517         120 VDIVVGEVMSVGKHPNADKLLVTVVNIGG-RAVTVVTNDLDVREGDRVAVAL----LP-------PRNFFGVVSEGMFLG  187 (219)
T ss_pred             EEEEEEEEEECCCCCCCCCEEEEEEECCC-EEEEEEECCCCCCCCCEEEEEE----CC-------HHHHCCCCCCCEEEC
T ss_conf             88876323422568987715999982188-4789970652211388779996----38-------067445013525631


Q ss_pred             H
Q ss_conf             8
Q gi|254780316|r  121 E  121 (805)
Q Consensus       121 ~  121 (805)
T Consensus       188 ~  188 (219)
T COG2517         188 A  188 (219)
T ss_pred             C
T ss_conf             1