HHsearch alignment for GI: 254780316 and conserved domain: COG3382
>COG3382 Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].
Probab=99.33 E-value=1.1e-11 Score=102.00 Aligned_cols=141 Identities=21% Similarity=0.233 Sum_probs=116.9
Q ss_pred CCCCCHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCEEEE
Q ss_conf 5566377878888640-132103999998999860870000010223332688623554311455420112454320000
Q gi|254780316|r 227 NNVAPNWMRQRLKAVG-LRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIA 305 (805)
Q Consensus 227 ~~~SP~wl~~rL~~~G-ir~inniVDitNyvmle~GqPlHafD~dki~~~i~vr~a~~~E~~~~Ld~~e~~L~~~~lvI~ 305 (805)
T Consensus 80 ~r~S~EALlrRv~kg~~lp~InpvVD~yNa~Sl~y~vPig~~D~d~~~g~lrL~~a~ggE~f~~lg~~~~~~~~geiv~~ 159 (229)
T COG3382 80 TRPSAEALLRRVLKGNSLPRINPVVDIYNAASLKYAVPIGGYDADKIVGDLRLTLADGGETFDTLGAKNEPPLEGEIVLV 159 (229)
T ss_pred CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEECCCCCEEECCCCCCCCCCCCCEEEE
T ss_conf 89729999999874898666562554105777762487441138770798169863687254324677878999947997
Q ss_pred CCCCCCC-CHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 2567631-001113553120136726999971578788877887616540155441345530135889998887521233
Q gi|254780316|r 306 SDGRIQS-IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC 384 (805)
Q Consensus 306 d~~~~ia-laGImGg~~s~v~~~T~~illEsA~F~p~~Ir~tar~l~l~TdaS~RfERgvd~~~~~~al~r~~~Li~e~~ 384 (805)
T Consensus 160 Dd~G~~~r~~~~Rds~rT~vt~~Tk~~l~I~e~vp~-----------------------~~~~~l~~a~~~l~~~l~~~~ 216 (229)
T COG3382 160 DDEGAFCRRWNWRDSVRTMVTESTKNVLLIAEGVPG-----------------------VEVEDLVEALDSLADLLEKLL 216 (229)
T ss_pred CCCCCEEEECCCCCCEEEEHHHCCCEEEEEEECCCC-----------------------CCHHHHHHHHHHHHHHHHHHC
T ss_conf 489880410454245055511056627898865898-----------------------568999999999999999865
Q ss_pred CCCCCC
Q ss_conf 455565
Q gi|254780316|r 385 GGTASD 390 (805)
Q Consensus 385 gg~~~~ 390 (805)
T Consensus 217 gG~~~~ 222 (229)
T COG3382 217 GGTRAV 222 (229)
T ss_pred CCCCCC
T ss_conf 886552