HHsearch alignment for GI: 254780316 and conserved domain: PRK00488

>PRK00488 pheS phenylalanyl-tRNA synthetase subunit alpha; Validated.
Probab=98.35  E-value=1.4e-05  Score=58.76  Aligned_cols=186  Identities=15%  Similarity=0.191  Sum_probs=120.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH--HHH-HHHHH-------CCCCCCCCCCCCCCCCHHHCHHHHH
Q ss_conf             7899889546789887877877402321004825765--520-00000-------0024677643210151221106776
Q gi|254780316|r  486 RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--LFG-GGQRE-------LEILNPISADMSNMRTSLLPGLLKA  555 (805)
Q Consensus       486 ~~~~~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~--~~~-~~~~~-------i~l~NPlS~e~s~lR~SLlp~LL~~  555 (805)
T Consensus       104 G~~HPit~~~~ei~~iF~~~Gf~v-~~GpeiE~~~~NFdaLn~P~~HPAR~~~DTFy~-----~~~~lLRTHTS~~qir~  177 (338)
T PRK00488        104 GGLHPLTRTIERIEDIFVGLGFEV-AEGPEIEDDYYNFEALNIPKDHPARDMQDTFYI-----DDRLLLRTHTSPVQIRT  177 (338)
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCEE-ECCCCEEEHHHHHHHHCCCCCCCCCCCCCEEEE-----CCCCEECCCCCHHHHHH
T ss_conf             664769999999999999869769-618831004546887569978854364662897-----68713435687888999


Q ss_pred             HHHHCCCCCCHHHHHHHCCCCCCCCCCC-CCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf             4321015861134543024444777544-310002210354310124620234544333314688875311111110145
Q gi|254780316|r  556 TGRNVDRAIADFAIFEVSHVYENDTPEG-QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS  634 (805)
Q Consensus       556 ~~~N~~r~~~~i~lFEiG~Vf~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ll~~l~~  634 (805)
T Consensus       178 m~~----~~pp~~~i~~GrvyR~d~~DatH~~~FhQ~E---------gl~-------vd~~it~~~Lk~~l~~f~~~~fg  237 (338)
T PRK00488        178 MEK----QKPPIRIIAPGRVYRNDSDDATHSPMFHQVE---------GLV-------VDKNISFADLKGTLEDFLKAFFG  237 (338)
T ss_pred             HHH----CCCCEEEEECCCCCCCCCCCCCCCEEEEEEE---------EEE-------EECCCCHHHHHHHHHHHHHHHCC
T ss_conf             972----6998699952663158999875350466400---------589-------71788799999999999999728


Q ss_pred             -CCCEEEECCCCCCCCCCCEEEEEE------------CCE-EEEEEEEEECHHHHHHCCCCCC---EEEEEEEHHHHHHH
Q ss_conf             -333033058865678981699998------------792-9999985477899996687997---89999878762354
Q gi|254780316|r  635 -LDSLRFESGAPSWYHPGRSGIIKT------------SAE-IVLGYFGEFHPNILDFFGLSNP---ICGFEVYLDSIPIS  697 (805)
Q Consensus       635 -~~~~~~~~~~~~~~hPgrsa~I~~------------~gk-~iiG~iG~ihP~i~~~~~i~~~---v~~~EI~ld~L~~~  697 (805)
T Consensus       238 ~~~~~R~rpsyFPFtEPs~Evdi~~~~~~g~gc~~~~~~~WlEi~G~Gmv~p~Vl~~~gid~~~~~G~AfG~GieR~aMl  317 (338)
T PRK00488        238 EDLKIRFRPSYFPFTEPSAEVDVSCFNCKGKGCRVCKNTGWLEVLGCGMVHPNVLRNVGIDPEEYSGFAFGMGIERLAML  317 (338)
T ss_pred             CCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCEEEEEEECHHHHHHH
T ss_conf             76647754788999998534788731457766544789963897376667889998669995527599875158899999