HHsearch alignment for GI: 254780316 and conserved domain: PRK06253
>PRK06253 O-phosphoseryl-tRNA synthetase; Reviewed.
Probab=98.93 E-value=5e-09 Score=83.28 Aligned_cols=209 Identities=15% Similarity=0.254 Sum_probs=135.4
Q ss_pred CCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 46776432101512211067764321015861134543024444777544310002210354310124620234544333
Q gi|254780316|r 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC 613 (805)
Q Consensus 534 ~NPlS~e~s~lR~SLlp~LL~~~~~N~~r~~~~i~lFEiG~Vf~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 613 (805)
T Consensus 175 L~p~s-~~~tLRSHmTsgwfitL~~l~~k~~~P~klFSIDRcFRrEq~eD~~hL~~yhsa--------------scvv~~ 239 (527)
T PRK06253 175 LKPES-SRLTLRSHMTSGWFITLSALWERKPLPFKLFSIDRCFRREQKEDASRLMTYHSA--------------SCVVAG 239 (527)
T ss_pred CCCCC-CCCEEHHCCCCHHHHHHHHHHHCCCCCEEEEEEEHEEECHHHCCHHHHHHHHEE--------------EEEEEC
T ss_conf 25544-453410010302788799997267998368741010220000245563454432--------------269975
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEEECC--CCCCCCCCCEEEEEE-----CCEEEEEEEEEECHHHHHHCCCCCCEEE
Q ss_conf 314688875311111110145333033058--865678981699998-----7929999985477899996687997899
Q gi|254780316|r 614 RFVDLFDAKADALSVIEPFVSLDSLRFESG--APSWYHPGRSGIIKT-----SAEIVLGYFGEFHPNILDFFGLSNPICG 686 (805)
Q Consensus 614 ~~~df~dlKg~v~~ll~~l~~~~~~~~~~~--~~~~~hPgrsa~I~~-----~gk~iiG~iG~ihP~i~~~~~i~~~v~~ 686 (805)
T Consensus 240 edVn~d~gkav~~~lL~~fGF~-~frFrPdek~skYY~P~TqtEVy~yhp~~~gWvEvatfGIysP~aL~~ygI~~PVmn 318 (527)
T PRK06253 240 EDVTVDDGKAVAEGLLSQFGFT-NFRFRPDEKRSKYYTPDTQTEVYAYHPKLDGWVEVATFGIYSPTALAEYGIDVPVMN 318 (527)
T ss_pred CCCCHHHHHHHHHHHHHHHCCC-EEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHHHHCCCCCCEEE
T ss_conf 9866777799999999970975-378434423566537886327999636678628973142567544543199974220
Q ss_pred EEEEHHHHHHHHHCCCCCC--CCCCCCCCCCCEEEEEEEEC-----CCCCHHHHHHHH-HHC--CCCEEEEEEEEEEECC
Q ss_conf 9987876235452024566--31368988872001899966-----887999999999-711--1003576989876367
Q gi|254780316|r 687 FEVYLDSIPISQKKRTKTK--KVVHLSSLHPVKRDLAFIVD-----QHIPAGTLVNII-KNV--DRLIDDVTVFDVFQGK 756 (805)
Q Consensus 687 ~EI~ld~L~~~~~~~~~~~--~~~~~s~fP~v~RDls~iv~-----~~v~~~~I~~~i-~~~--~~ll~~v~lfDvY~g~ 756 (805)
T Consensus 319 lGlGvERLAMI~~~~~DiR~l~ypQf~~~~lsD~eiA~~i~~~~~P~t~eg~~~a~~ii~~~~~~~~e~sPC~f~~~~g~ 398 (527)
T PRK06253 319 LGLGVERLAMILHNAEDVREMVYPQFYEWELSDREIARMIKVDKVPVTDEGKDLAREIVETCVKHADEPSPCEFEAWEGE 398 (527)
T ss_pred CCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
T ss_conf 01118999999818277887633456775668699986514046767578999999999999981899999468874031
Q ss_pred CC
Q ss_conf 79
Q gi|254780316|r 757 SL 758 (805)
Q Consensus 757 ~i 758 (805)
T Consensus 399 ~~ 400 (527)
T PRK06253 399 IF 400 (527)
T ss_pred CC
T ss_conf 04