HHsearch alignment for GI: 254780316 and conserved domain: PRK08655
>PRK08655 prephenate dehydrogenase; Provisional.
Probab=98.51 E-value=4e-06 Score=62.65 Aligned_cols=131 Identities=18% Similarity=0.356 Sum_probs=88.8
Q ss_pred CCEEEEEEEEEECHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHH
Q ss_conf 79299999854778999966879978999987876235452024566313689888720018999668879999999997
Q gi|254780316|r 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 (805)
Q Consensus 659 ~gk~iiG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~~~~~~~~~~~~~~~~s~fP~v~RDls~iv~~~v~~~~I~~~i~ 738 (805)
T Consensus 310 s~~vh~G~lk~v~~~~~~-l~~~~~~~~l~~--~ni~~~~~~el~~wk~---~nl~~~~~disv~~~~~~d~~ii~~~~~ 383 (441)
T PRK08655 310 SGKVHVGILKKVYPDEII-LKKGNKEIKLKI--SNIRLLSEKELREWKV---ENLEKYVRDISVLFPKGADPEVILELLD 383 (441)
T ss_pred CCCEEEEEEEEECCCEEE-EECCCCEEEEEE--ECCCCCCHHHHHHHHH---CCCCCCEEEEEEEECCCCCHHHHHHHHH
T ss_conf 880798788774386589-813993799986--3010389889999886---4576313568999269999799999985
Q ss_pred HCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCEEC
Q ss_conf 11100357698987636779988426999999847798889999999999999999999511981
Q gi|254780316|r 739 NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 (805)
Q Consensus 739 ~~~~ll~~v~lfDvY~g~~i~~gkkSla~rl~fqs~~kTLtd~EI~~i~~~ii~~l~~k~ga~LR 803 (805)
T Consensus 384 ~~~-~~~~~~i~d~y~g~~i~~~~~s~tfri~~------~~~~~~~~~~~~~~~~l~-~~g~~~r 440 (441)
T PRK08655 384 NLK-HKFDIEIIDVYSGPQIDEGRLSVTFRITS------FGKEDLENLEEEFTKLLE-GIGGKIR 440 (441)
T ss_pred CCC-CEEEEEEEEECCCCCCCCCCEEEEEEEEE------ECHHHHHHHHHHHHHHHH-CCCCEEC
T ss_conf 235-13457888803687467773279999998------457778889999999985-4687625