HHsearch alignment for GI: 254780316 and conserved domain: PTZ00326
>PTZ00326 phenylalanyl-tRNA synthetase; Provisional.
Probab=98.95 E-value=5.3e-08 Score=75.99 Aligned_cols=192 Identities=16% Similarity=0.194 Sum_probs=128.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH---HHHHHH-------HHHCCCCCCCCCC-------------
Q ss_conf 76789988954678988787787740232100482576---552000-------0000024677643-------------
Q gi|254780316|r 484 DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS---VLFGGG-------QRELEILNPISAD------------- 540 (805)
Q Consensus 484 ~~~~~~~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~---~~~~~~-------~~~i~l~NPlS~e------------- 540 (805)
T Consensus 237 ~~g~~hp~~~~~~~~r~if~~mGF~E~~~~~~ves~fwNfDaLf~Pq~HPARd~~DTF~l~~p~~~~~~~~~~~~~Vk~v 316 (505)
T PTZ00326 237 SMGNLHPLLKVRQEFREIFMEMGFEEMPTNRWVESSFWNFDALFIPQQHPARDLQDTFFLSKPETSKFLDAEYVERVKAV 316 (505)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 87766889999999999999779767668971331321311104898998665233477447542456878999988888
Q ss_pred ---------------------CCCCCCHHHCHHHHHHHH---HC--CCCCCHHHHHHHCCCCCCCCCCCC----CEEHHH
Q ss_conf ---------------------210151221106776432---10--158611345430244447775443----100022
Q gi|254780316|r 541 ---------------------MSNMRTSLLPGLLKATGR---NV--DRAIADFAIFEVSHVYENDTPEGQ----KYMAAG 590 (805)
Q Consensus 541 ---------------------~s~lR~SLlp~LL~~~~~---N~--~r~~~~i~lFEiG~Vf~~~~~~~~----~~~~~~ 590 (805)
T Consensus 317 He~G~~gs~Gw~y~W~~~~a~~~~LRthTt~vs~r~l~~~~~~~~~~~~~~P~k~fsi~rv~R~e~~d~th~~~f~Q~eg 396 (505)
T PTZ00326 317 HSGGGYGSIGWQYNWKLEEARKNVLRTHTTAVSARMLYKLAQQYQKGKGFKPKKYFSIDRVFRNETLDATHLAEFHQVEG 396 (505)
T ss_pred HCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCEEECCCCCCCCCCEEEEEEE
T ss_conf 50688788876778797787520636577537699999875404655688981475237264157777653404554357
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEE--CC--E-EEEE
Q ss_conf 10354310124620234544333314688875311111110145333033058865678981699998--79--2-9999
Q gi|254780316|r 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT--SA--E-IVLG 665 (805)
Q Consensus 591 ~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ll~~l~~~~~~~~~~~~~~~~hPgrsa~I~~--~g--k-~iiG 665 (805)
T Consensus 397 ~~-------------------~~~~~~~~~l~~~l~~f~~~~g~-~~~rfrp~yfpfteP--s~e~~~~~~~~~~w~Ei~ 454 (505)
T PTZ00326 397 VV-------------------IDRNLSLGDLMGTLREFFRRIGI-SKLRFKPAFNPYTEP--SMEIFGYHPQLKKWVEVG 454 (505)
T ss_pred EE-------------------ECCCCCHHHHHHHHHHHHHHHCC-CCEEECCCCCCCCCC--CEEEEEEECCCCCEEEEE
T ss_conf 89-------------------64888899999999999998498-757868888898998--278999707888479982
Q ss_pred EEEEECHHHHHHCCCCC--CEEEEEEEHHHHHHH
Q ss_conf 98547789999668799--789999878762354
Q gi|254780316|r 666 YFGEFHPNILDFFGLSN--PICGFEVYLDSIPIS 697 (805)
Q Consensus 666 ~iG~ihP~i~~~~~i~~--~v~~~EI~ld~L~~~ 697 (805)
T Consensus 455 g~Gm~~p~vl~~~g~~~~~~~~a~G~g~eR~am~ 488 (505)
T PTZ00326 455 NSGLFRPEMLRPMGFPEDVTVIAWGLSLERPTMI 488 (505)
T ss_pred CCCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHH
T ss_conf 6657587887325959998489986238899999