HHsearch alignment for GI: 254780316 and conserved domain: pfam03483
>pfam03483 B3_4 B3/4 domain. This domain is found in tRNA synthetase beta subunits as well as in some non tRNA synthetase proteins.
Probab=100.00 E-value=0 Score=448.35 Aligned_cols=173 Identities=40% Similarity=0.771 Sum_probs=170.7
Q ss_pred HHHHHHHCCCCCCC-CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCHHHHH
Q ss_conf 11233201123224-55663778788886401321039999989998608700000102233326886235543114554
Q gi|254780316|r 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 (805)
Q Consensus 213 ~c~~y~~~~i~~v~-~~~SP~wl~~rL~~~Gir~inniVDitNyvmle~GqPlHafD~dki~~~i~vr~a~~~E~~~~Ld 291 (805)
T Consensus 1 ~c~~~~~~~i~~i~~~~~SP~wl~~rL~~~G~~pIN~iVDitNyv~le~GqP~hafD~dki~g~i~vr~a~~~E~~~~L~ 80 (174)
T pfam03483 1 ACPRYFGRVIRGVKKNRPSPEWLQRRLRRAGIRPINNVVDITNYVMLELGQPLHAFDLDKIEGDIVVRLAKGGEKFTTLD 80 (174)
T ss_pred CCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCEEEECC
T ss_conf 99875079998987789998999999998599872175609999999958974454688748977999889996036226
Q ss_pred HHCCCCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHH
Q ss_conf 20112454320000256763100111355312013672699997157878887788761654015544134553013588
Q gi|254780316|r 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 (805)
Q Consensus 292 ~~e~~L~~~~lvI~d~~~~ialaGImGg~~s~v~~~T~~illEsA~F~p~~Ir~tar~l~l~TdaS~RfERgvd~~~~~~ 371 (805)
T Consensus 81 ~~~~~l~~~~lVi~D~~~~i~laGi~gg~~s~v~~~Tk~I~lE~a~f~p~~i~~~~r~~~l~tdas~rfergvd~~~~~~ 160 (174)
T pfam03483 81 GKERELDPGDLVIADDDGPVALAGIMGGEESEVTEDTTNIFLESAYFDPVAIRKTSRKLGLRTDASYRFERGVDPELLEA 160 (174)
T ss_pred CCCCCCCCHHEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHH
T ss_conf 86052784122888678760551010675333344730799995388689999999981898688887756899899999
Q ss_pred HHHHHHHHHCCCCC
Q ss_conf 99988875212334
Q gi|254780316|r 372 VLKHIVSLILSLCG 385 (805)
Q Consensus 372 al~r~~~Li~e~~g 385 (805)
T Consensus 161 al~~~~~Li~~~~g 174 (174)
T pfam03483 161 ALDRATALLLELCG 174 (174)
T ss_pred HHHHHHHHHHHHCC
T ss_conf 99999999999749