HHsearch results for GI: 254780316 and protein with PDBid: 1qe0_A
>1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1
Probab=92.42 E-value=0.029 Score=33.69 Aligned_cols=90 Identities=6% Similarity=0.028 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH-HHH-----HHHHCCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCC
Q ss_conf 8895467898878778774023210048257655-200-----0000002467764321015122110677643210158
Q gi|254780316|r 490 LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL-FGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 (805)
Q Consensus 490 ~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~~-~~~-----~~~~i~l~NPlS~e~s~lR~SLlp~LL~~~~~N~~r~ 563 (805)
..+...+.+++.+...||.|+.|-.|-..+.... .+. .++..++.+. +.+.=.||+.+.+++...+..|..+.
T Consensus 18 ~~~~i~~~i~~~~~~~Gy~~V~tP~ie~~dl~~~~~g~~~~~~~~~mf~~~D~-~g~~~~LRpd~t~~~~r~~~~~~~~s 96 (420)
T 1qe0_A 18 KWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDK-GDRSITLRPEGTAAVVRSYIEHKMQG 96 (420)
T ss_dssp HHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEECHH-HHCCEEECSCSHHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCCHHHHHCCCEECC-CCCEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 99999999999999869979999520408774255675211157650432669-99888327776849999999856640
Q ss_pred --CCHHHHHHHCCCCCCCC
Q ss_conf --61134543024444777
Q gi|254780316|r 564 --IADFAIFEVSHVYENDT 580 (805)
Q Consensus 564 --~~~i~lFEiG~Vf~~~~ 580 (805)
...+|+|++|+||+...
T Consensus 97 ~~~lP~r~~~~g~v~R~e~ 115 (420)
T 1qe0_A 97 NPNQPIKLYYNGPMFRYER 115 (420)
T ss_dssp CSSCSEEEEEEEEEECC--
T ss_pred CCCCCEEEEEECCEEECCC
T ss_conf 6778758998864787046