HHsearch results for GI: 254780316 and protein with PDBid: 2cxi_A
>2cxi_A Phenylalanyl-tRNA synthetase beta chain; aminoacyl-tRNA synthetase, ligase, structural genomics, NPPSFA; HET: MSE; 1.94A {Pyrococcus horikoshii OT3}
Probab=100.00 E-value=0 Score=529.69 Aligned_cols=317 Identities=18% Similarity=0.239 Sum_probs=273.5
Q ss_pred CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEECCCC
Q ss_conf 97786799884789998899999987458604211124656874899999975657998708999759995798975483
Q gi|254780316|r 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAP 80 (805)
Q Consensus 1 M~is~~WL~~~v~~~~~~~~l~~~lt~~G~EVe~i~~~~~~~~vvvg~v~~~~~hP~adl~v~~Vd~g~~~~~~IvcgA~ 80 (805)
|.++++||.+++..+.+.+++++.|+++|+|||++.. +
T Consensus 4 i~~~~~~L~~~lg~~~~~e~~~~~l~~~G~ev~~~~~---------------------------------~--------- 41 (348)
T 2cxi_A 4 FDVSKSDLERLIGRSFSIEEWEDLVLYAKCELDDVWE---------------------------------E--------- 41 (348)
T ss_dssp EEEEHHHHHHHHTSCCCHHHHHHHHHHTTEEEEEEEE---------------------------------E---------
T ss_pred EEECHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC---------------------------------C---------
T ss_conf 9973999999878999989999877876971135557---------------------------------7---------
Q ss_pred CCCCCCEEEEECCCCEECCCCEEEEEEHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCEEEEEE
Q ss_conf 45589789896687792589839833120586505454118876998547750781688888845588708885599987
Q gi|254780316|r 81 NVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVS 160 (805)
Q Consensus 81 Nv~~g~~V~~A~~Ga~lp~g~~~i~~~~irGv~S~GMlCS~~ELgl~~~~~gI~~l~~~~~~G~~~~~~l~l~D~i~ei~ 160 (805)
. +|.++|++
T Consensus 42 -------------------~----------------------------------------------------~~~~~eid 50 (348)
T 2cxi_A 42 -------------------N----------------------------------------------------GKVYFKLD 50 (348)
T ss_dssp -------------------T----------------------------------------------------TEEEEEEE
T ss_pred -------------------C----------------------------------------------------CEEEEEEC
T ss_conf -------------------7----------------------------------------------------71899847
Q ss_pred EC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf 08-78576655578999877641156666554566777777741589840731112332011232245566377878888
Q gi|254780316|r 161 LT-PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 (805)
Q Consensus 161 iT-pNR~D~ls~~GiARElaa~~~~~l~~~~~~~~~~~~~~~~~i~v~i~~~~~c~~y~~~~i~~v~~~~SP~wl~~rL~ 239 (805)
+| ||||||||++|+||||||+++.+++.|.+..+.. ...+.|..+.++.||+|++++++||++
T Consensus 51 ~t~pNR~D~lS~~GiARel~a~~~~~~~~p~~~~~~~----~~~i~v~~~~~~~~p~~~~~vi~~v~~------------ 114 (348)
T 2cxi_A 51 SKDTNRPDLWSAEGVARQIKWALGIEKGLPKYEVKKS----NVTVYVDEKLKDIRPYGVYAIVEGLRL------------ 114 (348)
T ss_dssp ECCTTCGGGSSHHHHHHHHHHHTTSSCSSCCCCEEEE----EEEEEECGGGTTTSCEEEEEEEESCCC------------
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC----CCEEEEEECCCCCCCEEEEEEEECCCC------------
T ss_conf 9999828886899999999997688878987334788----842899505777651699999999879------------
Q ss_pred HHCCCCCHHHHHHHHHHHHHHCC-----CEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCE------------
Q ss_conf 64013210399999899986087-----0000010223332688623554311455420112454320------------
Q gi|254780316|r 240 AVGLRSISALVDITNYVSLDRGY-----PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNV------------ 302 (805)
Q Consensus 240 ~~Gir~inniVDitNyvmle~Gq-----PlHafD~dki~~~i~vr~a~~~E~~~~Ld~~e~~L~~~~l------------ 302 (805)
|.+|+|++||+|||+|+++|| |+||||+|||+++|.||.|+++|+|++||++++.+..+++
T Consensus 115 --~~~~i~~ivdi~n~v~~~~Gq~r~~~pih~fDldkI~~~i~vr~a~~~e~f~~Ld~~~~~~~~e~l~~~~~~~~~~~~ 192 (348)
T 2cxi_A 115 --DEDSLSQMIQLQEKIALTFGRRRREVAIGIFDFDKIKPPIYYKAAEKTEKFAPLGYKEEMTLEEILEKHEKGREYGHL 192 (348)
T ss_dssp --CHHHHHHHHHHHHHHHHTTTTTTTSEEEEEEEGGGSCSSEEEEEECTTCEECBTTCSSCEEHHHHHHHSHHHHHHGGG
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEECCCCCEEEECCCCHHCCCHHHHHHCCCCCEEEEE
T ss_conf --847899999999999999755540386201757676884699954999868879963313735542204566502344
Q ss_pred --------EEECC-CCCCCCHHHCCCCCC-CCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHH
Q ss_conf --------00025-676310011135531-20136726999971578788877887616540155441345530135889
Q gi|254780316|r 303 --------VIASD-GRIQSIAGIIGGKHA-GCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV 372 (805)
Q Consensus 303 --------vI~d~-~~~ialaGImGg~~s-~v~~~T~~illEsA~F~p~~Ir~tar~l~l~TdaS~RfERgvd~~~~~~a 372 (805)
||+|. .+++++||||||..| +++.+|+++|+|+|.|||..++ +++++.+++|||||.++..+.
T Consensus 193 i~~~~~~~vi~d~~~~ils~~~ii~~~~s~ki~~~T~~i~~e~~~~d~~~~~-----~~l~~~~~~l~e~g~~~~~~~-- 265 (348)
T 2cxi_A 193 IKDKQFYPLLIDSEGNVLSMPPIINSEFTGRVTTDTKNVFIDVTGWKLEKVM-----LALNVMVTALAERGGKIRSVR-- 265 (348)
T ss_dssp TTTSSSEEEEEETTSCEEEETTTEEBSSSSCCCTTCCSEEEEEEESCHHHHH-----HHHHHHHHHHHTTTCEEEEEE--
T ss_pred ECCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCCCHHEEEEEECCCHHHHH-----HHHHHHHHHHHHHCCCCEEEE--
T ss_conf 2157775389818984699545426000265675531148986148989999-----999999999998479840489--
Q ss_pred HHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC
Q ss_conf 99888752123345556525874135543100004311333311345878999999984022210345623664034543
Q gi|254780316|r 373 LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQD 452 (805)
Q Consensus 373 l~r~~~Li~e~~gg~~~~~~~~~~~~~~~~~I~l~~~~i~~ilG~~i~~~ei~~iL~~Lgf~v~~~~~~~~V~vPs~R~D 452 (805)
+ +........+..++++|+++.++++++||++++.++|.++|++|||+++.+++.|.|+||+||+|
T Consensus 266 ----------v----~~~~~~~~~p~~~~~~i~~~~~~i~~~lG~~i~~~~i~~iL~~Lgf~v~~~~~~~~V~vP~~R~D 331 (348)
T 2cxi_A 266 ----------V----VYKDFEIETPDLTPKEFEVELDYIRKLSGLELNDGEIKELLEKMMYEVEISRGRAKLKYPAFRDD 331 (348)
T ss_dssp ----------E----ECSSCEEEECCCCCEEEEEEHHHHHHHHTCCCCHHHHHHHHHHTTCEEEEETTEEEEEECTTCCC
T ss_pred ----------E----EECCCEECCCCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCEEEEECCCCCCC
T ss_conf ----------9----94574120467776479967999988868867999999999987997996598289989998566
Q ss_pred CCCHHHHHHHHHHHCCC
Q ss_conf 34402567676765352
Q gi|254780316|r 453 VEEKADLVEEILRIYGV 469 (805)
Q Consensus 453 I~~e~DLiEEIaRiyGY 469 (805)
|.+++||||||||+|||
T Consensus 332 I~~~~DliEEIaRiyGY 348 (348)
T 2cxi_A 332 IMHARDILEDVLIAYGY 348 (348)
T ss_dssp CCSHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHCCC
T ss_conf 69733899987875288