HHsearch results for GI: 254780316 and protein with PDBid: 2odr_A
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=100.00 E-value=0 Score=476.81 Aligned_cols=405 Identities=13% Similarity=0.104 Sum_probs=311.4
Q ss_pred HHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHC----CCCCHH
Q ss_conf 8761654015544134553013588999888752123345556525874135543100004311333311----345878
Q gi|254780316|r 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG----IDVPIE 422 (805)
Q Consensus 347 ar~l~l~TdaS~RfERgvd~~~~~~al~r~~~Li~e~~gg~~~~~~~~~~~~~~~~~I~l~~~~i~~ilG----~~i~~~ 422 (805)
-..+||+||||+|||||+|++++..+++||..+..+++++..... +..+.+...| +....+
T Consensus 8 ~~s~GL~td~ShrFer~~~~ela~ka~ErA~~~~~eil~~~~id~---------------~lPr~~~~~Gk~HPl~~~ie 72 (665)
T 2odr_A 8 HHSSGLVPRGSHMFKREEIIEMANKDFEKAWIETKDLIKAKKINE---------------SYPRIKPVFGKTHPVNDTIE 72 (665)
T ss_dssp ---------------CHHHHHHHHHCHHHHHHHHGGGSCCCCTTT---------------SGGGSCCCCCBCCHHHHHHH
T ss_pred CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---------------CCCCCCCCCCCCCHHHHHHH
T ss_conf 435787860553100113367669999999996455506775554---------------58998878766082899999
Q ss_pred HHHHHHHHHHHHHHCCC---CCCEE---EECCCCC---C-CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 99999998402221034---56236---6403454---3-3440256767676535233466765544345767899889
Q gi|254780316|r 423 DSLRILERLGFSVIGEY---DKFEV---SVPSWRQ---D-VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ 492 (805)
Q Consensus 423 ei~~iL~~Lgf~v~~~~---~~~~V---~vPs~R~---D-I~~e~DLiEEIaRiyGYdnIp~~~l~~~~~~~~~~~~~~~ 492 (805)
+|.++|.+|||++.... +.|.+ .+|+||+ | +..+.|++|||+|+|||||||+..+.... ........+
T Consensus 73 eIreIL~rLGFee~~gp~Ie~~wnfD~LfvP~~HPaRDDtFyLE~DliEEVaRiyGYdnIp~tlp~~~~--~~~e~~~~~ 150 (665)
T 2odr_A 73 NLRQAYLRMGFEEYINPVIVDERDIYKQFGPEAMAVLDRCFYLAGLPRPDVGLSDEKISQIEKLGIKVS--EHKESLQKI 150 (665)
T ss_dssp HHHHHHHHTTCEECCCCSEEEHHHHHHHHGGGHHHHHHTCEEEEBCCC--------------------------------
T ss_pred HHHHHHHHCCCEEEECCEEEEEEECCCCCCCCCCCHHCCCEEECCCCHHHHHCCCCCCCCCCCCCCCCC--CCCCHHHHH
T ss_conf 999999988988963894745250443268987752117154247632233022452334322444544--531013567
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 54678988787787740232100482576552000000002467764321015122110677643210158611345430
Q gi|254780316|r 493 SRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 (805)
Q Consensus 493 ~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~~~~~~~~~i~l~NPlS~e~s~lR~SLlp~LL~~~~~N~~r~~~~i~lFEi 572 (805)
...+++++.|.+.||+|++||||++++....+.....++.+.||+++++++||||++|||+.++++|++|+..++++||+
T Consensus 151 ~~~~k~r~~l~~~G~~EVitySfvs~~~~~~l~~~~~~i~l~NPisSe~svLRThlspgll~~l~~N~~r~~~plrlFEi 230 (665)
T 2odr_A 151 LHGYKKGTLDGDDLVLEISNALEISSEMGLKILEDVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSI 230 (665)
T ss_dssp ---------------------------------------CCCCCCBCCSEEECCCTHHHHHHHHHHHTTTSCSCEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 66665312221046124542022362443202565552002585531355648887268999999998579998589977
Q ss_pred CCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCEEEECCCCCCCCCC
Q ss_conf 244447775443100022103543101246202345443333146888753111111101453-3303305886567898
Q gi|254780316|r 573 SHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL-DSLRFESGAPSWYHPG 651 (805)
Q Consensus 573 G~Vf~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ll~~l~~~-~~~~~~~~~~~~~hPg 651 (805)
|+||.++....+.+.....+. .|-. -.+.+||||+||.+++++..++.. ..+++.+...+++|||
T Consensus 231 GrVFR~D~~~D~tHl~~fhQl-------eGlv-------vg~~vdf~DLKg~le~lL~~lg~~~vkfr~~~s~~Pf~hPg 296 (665)
T 2odr_A 231 DRCFRREQKEDKSHLMTYHSA-------SCAI-------AGEGVDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYYTPE 296 (665)
T ss_dssp EEEECCCSCCCSSCCSEEEEE-------EEEE-------ECTTCCHHHHHHHHHHHHHTTTCCCEEEEECTTCCTTBCTT
T ss_pred EEEECCCCCCCCCCCCEEEEE-------EEEE-------ECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
T ss_conf 788747875546558611489-------9999-------86756789999999999999678871899657778998994
Q ss_pred CEEEEEECC----EE-EEEEEEEECHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCC--CCCCCCCCCCCCEEEEEEEE
Q ss_conf 169999879----29-999985477899996687997899998787623545202456--63136898887200189996
Q gi|254780316|r 652 RSGIIKTSA----EI-VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT--KKVVHLSSLHPVKRDLAFIV 724 (805)
Q Consensus 652 rsa~I~~~g----k~-iiG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~~~~~~~~~~--~~~~~~s~fP~v~RDls~iv 724 (805)
++++|++.+ +. -+|.+|++||.+++++||+.++++|++.+|.|.......... ..+.++++||.+.||+|++|
T Consensus 297 ~eaeV~~~~~k~~~WlEIgg~G~vhP~VLk~~GId~~V~AFGLGLERLAMlk~gI~DIR~L~~p~f~~~~~s~RDlA~~V 376 (665)
T 2odr_A 297 TQTEVYAYHPKLKEWLEVATFGVYSPVALSKYGIDVPVMNLGLGVERLAMISGNFADVREMVYPQFYEHKLNDRNVASMV 376 (665)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCCSCEEEEEEEHHHHHHHHTTCSCHHHHHCGGGSCCCCCHHHHHTTE
T ss_pred EEEEEEEEECCCCEEEEEEECCCCCHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHEE
T ss_conf 05899999456983999992443079999876979857999975899999873997688761666578984331221121
Q ss_pred --CCCCCHHHHHHHHHHC-CCCEEEEE-----EEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHH
Q ss_conf --6887999999999711-10035769-----8987636779988426999999847798889999
Q gi|254780316|r 725 --DQHIPAGTLVNIIKNV-DRLIDDVT-----VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 (805)
Q Consensus 725 --~~~v~~~~I~~~i~~~-~~ll~~v~-----lfDvY~g~~i~~gkkSla~rl~fqs~~kTLtd~E 782 (805)
+++..++++.+.+++. ....+++. .||+|+|++++++|||+++++++++.++||-..-
T Consensus 377 ~ldk~p~~~e~~~i~~~i~~~~~~~~~~~sp~~FdvyeG~~~g~~KKsIavsv~~~eenk~L~g~~ 442 (665)
T 2odr_A 377 KLDKVPVMDEIYDLTKELIESCVKNKDLKSPCELAIEKTFSFGKTKKNVKINIFEKEEGKNLLGPS 442 (665)
T ss_dssp EESCCCSSHHHHHHHHHHHHHHHHC----------------------------------------C
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCCEEEEEEEEEECCCCCCCCHH
T ss_conf 114674607799999999999986487678736999755577998528999999536897426814