HHsearch results for GI: 254780316 and protein with PDBid: 2odr_C
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=100.00 E-value=0 Score=459.51 Aligned_cols=407 Identities=13% Similarity=0.094 Sum_probs=299.4
Q ss_pred HHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHCCCCCHHHHHH
Q ss_conf 87616540155441345530135889998887521233455565258741355431000043113333113458789999
Q gi|254780316|r 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLR 426 (805)
Q Consensus 347 ar~l~l~TdaS~RfERgvd~~~~~~al~r~~~Li~e~~gg~~~~~~~~~~~~~~~~~I~l~~~~i~~ilG~~i~~~ei~~ 426 (805)
-..+||+||||+|||||+|++++..+++||..+..+++++...... + |. .+...-+...+++. .+++.+
T Consensus 8 ~~S~GL~tdaShrFERgvd~eLa~ka~ErAw~~~~eiv~~~~iD~~--~--Pr-~~~~~Gk~HPl~~~------ieeIre 76 (701)
T 2odr_C 8 HHSSGLVPRGSHMFKREEIIEMANKDFEKAWIETKDLIKAKKINES--Y--PR-IKPVFGKTHPVNDT------IENLRQ 76 (701)
T ss_dssp ---------------CHHHHHHHHHCHHHHHHHHGGGSCCCCTTTS--S--TT-CCCCCCBCCHHHHH------HHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--C--CC-CCCCCCCCCHHHHH------HHHHHH
T ss_conf 4357878506650001143777899999999850010265745545--9--99-88777770717999------999999
Q ss_pred HHHHHHHHHHCCC---CCCEEE---ECCCC---CC-CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 9998402221034---562366---40345---43-34402567676765352334667655443457678998895467
Q gi|254780316|r 427 ILERLGFSVIGEY---DKFEVS---VPSWR---QD-VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR 496 (805)
Q Consensus 427 iL~~Lgf~v~~~~---~~~~V~---vPs~R---~D-I~~e~DLiEEIaRiyGYdnIp~~~l~~~~~~~~~~~~~~~~~~~ 496 (805)
+|.+|||++.... +.|.+. +|+|| .| +..+.|++|||+|+|||||||+..+.... . .......+...+
T Consensus 77 IL~rLGFeE~~gp~Iv~ewnFD~LfvP~~HPaRDDtFyLE~DliEEVaRi~GYdnIp~~~p~~~~-~-~~e~~e~~~~~~ 154 (701)
T 2odr_C 77 AYLRMGFEEYINPVIVDERDIYKQFGPEAMAVLDRCFYLAGLPRPDVGLSDEKISQIEKLGIKVS-E-HKESLQKILHGY 154 (701)
T ss_dssp HHHHTTCEECCCCSEEEHHHHHHHHGGGHHHHHHTCEEEEECCC------------------------------------
T ss_pred HHHHCCCEEEECCEEEEEECCCCCCCCCCCCHHHCCEEECCCCHHHHCCCCCCCCCCCCCCCCCC-C-CCHHHHHHHHHH
T ss_conf 99978988974896845451641168987743207154347641132023452233212455554-4-200135666766
Q ss_pred HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHHHHCCCC
Q ss_conf 89887877877402321004825765520000000024677643210151221106776432101586113454302444
Q gi|254780316|r 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 (805)
Q Consensus 497 ~ir~~L~~~Gf~Ev~tysl~s~~~~~~~~~~~~~i~l~NPlS~e~s~lR~SLlp~LL~~~~~N~~r~~~~i~lFEiG~Vf 576 (805)
++++.+.+.||+|++||||++++....+.....++.+.||+|+++++||||++|||+.++++|++|+.+++|+||+|+||
T Consensus 155 k~r~~l~~~G~~EvitySfvd~~~~~~~~~~~~p~~l~NPisse~sVLRThttpGlL~~l~~n~~r~~~piRlFeiGrVF 234 (701)
T 2odr_C 155 KKGTLDGDDLVLEISNALEISSEMGLKILEDVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCF 234 (701)
T ss_dssp -----------------------------------CCCCCCEEEEEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 53011210341024320234723320025655620025855301456176874669999999985799984999876667
Q ss_pred CCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC-CEEEECCCCCCCCCCCEEE
Q ss_conf 477754431000221035431012462023454433331468887531111111014533-3033058865678981699
Q gi|254780316|r 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRSGI 655 (805)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ll~~l~~~~-~~~~~~~~~~~~hPgrsa~ 655 (805)
.++......+.....+. .| | -..+.+||||+||.+++++..++... .+++.+..++++|||++++
T Consensus 235 R~D~i~DatHl~~FhQ~-------EG------l-vvg~~Vdf~DLKgiLe~lL~~Lg~~~vkfr~~~s~~Pf~hPg~eae 300 (701)
T 2odr_C 235 RREQKEDKSHLMTYHSA-------SC------A-IAGEGVDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQTE 300 (701)
T ss_dssp CCCSCCCSSCCSEEEEE-------EE------E-EECTTCCHHHHHHHHHHHHHTTTCCCEEEEECTTCCTTBCTTCCEE
T ss_pred ECCCCCCCCCCCEEEEE-------EE------E-EECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEE
T ss_conf 25762425578424678-------99------9-9858868999999999999996787729996577889989913589
Q ss_pred EEEC----CEEE-EEEEEEECHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCC--CCCCCCCCCCCEEEEEEEE--CC
Q ss_conf 9987----9299-999854778999966879978999987876235452024566--3136898887200189996--68
Q gi|254780316|r 656 IKTS----AEIV-LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK--KVVHLSSLHPVKRDLAFIV--DQ 726 (805)
Q Consensus 656 I~~~----gk~i-iG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~~~~~~~~~~~--~~~~~s~fP~v~RDls~iv--~~ 726 (805)
|++. ++.+ +|.+|++||.+++++||+.++++|++.+|.|........... .+..+..++.+.||+|+.+ ++
T Consensus 301 V~~~~~~~~~WlEIgg~GmvhP~VL~~~GId~~V~AfGLGLERLAMlkygI~DIR~L~~P~f~~~~ls~rd~A~~v~vdk 380 (701)
T 2odr_C 301 VYAYHPKLKEWLEVATFGVYSPVALSKYGIDVPVMNLGLGVERLAMISGNFADVREMVYPQFYEHKLNDRNVASMVKLDK 380 (701)
T ss_dssp EEEEETTTTEEEEEEEEEEBCHHHHHHTTCCSCEEEEEEEHHHHHHHHTTCSCHHHHHCGGGSCCCCCHHHHHHHBCCSS
T ss_pred EEEEECCCCEEEEEECCCCCCHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHEEEECC
T ss_conf 99994659948999657540799998769798679998778999998739917777615774567777656200110136
Q ss_pred CCCHHHHHHHHHHCC-CCE-----EEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCH
Q ss_conf 879999999997111-003-----576989876367799884269999998477988899
Q gi|254780316|r 727 HIPAGTLVNIIKNVD-RLI-----DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 (805)
Q Consensus 727 ~v~~~~I~~~i~~~~-~ll-----~~v~lfDvY~g~~i~~gkkSla~rl~fqs~~kTLtd 780 (805)
...+.+....+++.- ..+ ++..+||+|+|++++++|||++++++++...+||-.
T Consensus 381 ~p~~~e~~~i~~~iv~~~~~~~~~~sp~~FdVyeG~~~g~~KKsIaV~v~e~eenk~L~g 440 (701)
T 2odr_C 381 VPVMDEIYDLTKELIESCVKNKDLKSPCELAIEKTFSFGKTKKNVKINIFEKEEGKNLLG 440 (701)
T ss_dssp CC----------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCCEEEEEEEEECCCCCCCCC
T ss_conf 753587999999999999971887788379997661468885389999980378972258