HHsearch results for GI: 254780316 and protein with PDBid: 3ica_A
>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, beta subunit, structural genomics, PSI-2, protein structure initiative; HET: TAM; 2.44A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.5e-42 Score=319.64 Aligned_cols=206 Identities=18% Similarity=0.205 Sum_probs=173.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH--HHHHCCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCH
Q ss_conf 98895467898878778774023210048257655200--0000002467764321015122110677643210158611
Q gi|254780316|r 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG--GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 (805)
Q Consensus 489 ~~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~~~~~--~~~~i~l~NPlS~e~s~lR~SLlp~LL~~~~~N~~r~~~~ 566 (805)
+..+++.+++|+.|+++||+|++||||++++..+.+.. .+.+|+|+||+|+|+++||+||+||||+++++|++|++.+
T Consensus 4 d~~~~~~~~ir~~L~~~Gf~Ev~tys~~~~~~~~~~~~~~~~~~v~l~NPls~d~~~lR~sLlpgLL~~~~~N~~~~~~~ 83 (213)
T 3ica_A 4 DRRYKWQTVVSEQLVGAGFNEILNNSLTAGSYYEGLKSHPREMAVELMNPLSQELNCMRQTLLFGGLETLSHNLRRKHLS 83 (213)
T ss_dssp HHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGGTTCSSSCGGGCCBCSSBSCSSEEEECSSSHHHHHHHHHHHHTTTCSE
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 57689999999999978963001276789899987417875670795288656689998876864999987666534666
Q ss_pred HHHHHHCCCCCCCCCCC--CCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCC
Q ss_conf 34543024444777544--3100022103543101246202345443333146888753111111101453330330588
Q gi|254780316|r 567 FAIFEVSHVYENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 (805)
Q Consensus 567 i~lFEiG~Vf~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ll~~l~~~~~~~~~~~~ 644 (805)
+++||+|+||..+.... +.......+...++...+|..+...|....+.+|||++||++++++..++...........
T Consensus 84 ~~lFEiG~vf~~~~~~~~~~~~~~~~~e~~~l~~~~~G~~~~~~w~~~~~~~df~~~Kgive~ll~~lgi~~~~~~~~~~ 163 (213)
T 3ica_A 84 LYLFEWGKCYRFHAAKRTDETPLAAYAEDDRLGIWICGQRVHNSWAHPEEPTSVFELKAVVEQVLCRVGIETGAYTLKTA 163 (213)
T ss_dssp EEEEEEEEEEEEECCCC--CCSSCEEEEEEEEEEEEEEBCCC-----CCCBCCHHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred EEEEEEEEEECCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 35897411661477765432101002035189999988865666565433005999999999999982998321302255
Q ss_pred CCCCCCCCEEEEEECCEEEEEEEEEECHHHHHHCCCCCCEEEEEEEHHHHH
Q ss_conf 656789816999987929999985477899996687997899998787623
Q gi|254780316|r 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 (805)
Q Consensus 645 ~~~~hPgrsa~I~~~gk~iiG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~ 695 (805)
.+.+||+++|.++.+|+.+ |++|+|||.++++|+|+.|||+|||++|.|.
T Consensus 164 ~~~~~~~~~a~i~~~~~~i-G~~G~l~p~i~~~~~i~~~v~~~Ei~ld~Ll 213 (213)
T 3ica_A 164 DNDLYASAMEVKTRSGKLL-GTFGTVSTELIKRFEIEQPVYFAELLWDALM 213 (213)
T ss_dssp CCTTEEEEEEEEETTCCEE-EEEEEECHHHHHHTTCCSCEEEEEEEHHHHC
T ss_pred CCCCCCCCEEEEEECCCEE-EEEEEECHHHHHHCCCCCCEEEEEEEHHHHC
T ss_conf 6433566236887789599-9999988999987497998799999979939