HHsearch results for GI: 254780316 and protein with PDBid: 3l4g_B
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=100.00 E-value=0 Score=923.92 Aligned_cols=533 Identities=17% Similarity=0.176 Sum_probs=431.8
Q ss_pred HHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHH-CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 2058650545411887699854775078168888884558870-888559998708785766555789998776411566
Q gi|254780316|r 108 KIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYL-ELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKL 186 (805)
Q Consensus 108 ~irGv~S~GMlCS~~ELgl~~~~~gI~~l~~~~~~G~~~~~~l-~l~D~i~ei~iTpNR~D~ls~~GiARElaa~~~~~l 186 (805)
+-++.+|.||+|| |+|+ +.+||...++..+.+......+ ..||+||||++||||||||||+||||||||+++. +
T Consensus 17 ~~~~~e~~~~lc~--~~gl--e~d~~~~~~~~~~~~~~~~~~~~~~dd~i~eieiTpNR~D~lS~~GiARelaa~~~~-~ 91 (589)
T 3l4g_B 17 RTYTDEEFDELCF--EFGL--ELDEITSEKEIISKEQGNVKAAGASDVVLYKIDVPANRYDLLCLEGLVRGLQVFKER-I 91 (589)
T ss_dssp SCCCTTHHHHHHH--HTTC--EEEEEEEHHHHHTTTSSCCCCCSSSSSEEEEEECCTTCSTTSSHHHHHHHHHHHTTS-S
T ss_pred CCCCHHHHHHHHH--HCCC--CCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCC-C
T ss_conf 9898789997787--6398--035654531102344452000256888589996088757886899999999984488-7
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCC----CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 6655456677777774158984073111233201123224556----637787888864013210399999899986087
Q gi|254780316|r 187 KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV----APNWMRQRLKAVGLRSISALVDITNYVSLDRGY 262 (805)
Q Consensus 187 ~~~~~~~~~~~~~~~~~i~v~i~~~~~c~~y~~~~i~~v~~~~----SP~wl~~rL~~~Gir~inniVDitNyvmle~Gq 262 (805)
+.|.+...... .....+.+.+++.+.||+|.+++|+||++++ ||.|||+||+++|+|+ ||+||||||+|+++||
T Consensus 92 ~~p~~~~~~~~-~~~~~~~v~~~~~~~cp~~~~~vi~~v~~~~~~~~sp~wlq~rL~~~g~r~-~~~VdItnyv~~~~gq 169 (589)
T 3l4g_B 92 KAPVYKRVMPD-GKIQKLIITEETAKIRPFAVAAVLRNIKFTKDRYDSFIELQEKLHQNICRK-RALVAIGTHDLDTLSG 169 (589)
T ss_dssp CCCCCEEECCS-SCCCEEEECTTTTTTSCEEEEEEECCBCCCHHHHHHHHHHHHHTTTTTTTT-TTSEEEEEEEGGGCCS
T ss_pred CCCCCCCCCCC-CCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC-CCEEEEHHEEHHHCCC
T ss_conf 78765555777-765443552256454975899999753137200059999999999827985-5367321146865389
Q ss_pred CEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCE--------------EEECCCC-CCCCHHHCCCCCCCCCCC
Q ss_conf 0000010223332688623554311455420112454320--------------0002567-631001113553120136
Q gi|254780316|r 263 PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNV--------------VIASDGR-IQSIAGIIGGKHAGCDDN 327 (805)
Q Consensus 263 PlHafD~dki~~~i~vr~a~~~E~~~~Ld~~e~~L~~~~l--------------vI~d~~~-~ialaGImGg~~s~v~~~ 327 (805)
|+|+|+.++ +.+.++.+..+|++.++|+.++.++.+++ ||+|+++ ++++||||||.+|+|+++
T Consensus 170 Plhy~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~vi~d~~~~vl~lagiigg~~s~v~~~ 247 (589)
T 3l4g_B 170 PFTYTAKRP--SDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGDHSRITVN 247 (589)
T ss_dssp CEEEEEECS--TTCEECBTTCSSCEEHHHHHHHSTTCTTTTTTTTTTCCSSCEEEEECTTCCCCEETTTEEBSTTCCCTT
T ss_pred CEEEEEECC--CCEEEEECCCCCEEEECCCEEEEECCCCHHHHHCCCCCCCCEEEEECCCCEEEEECCCCCCCCEEECCC
T ss_conf 879999779--974899878872476034406760463244311211036750489888967898564336766166565
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC---------CCEEEEECC
Q ss_conf 72699997157878887788761654015544134553013588999888752123345556---------525874135
Q gi|254780316|r 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---------DICIARNIT 398 (805)
Q Consensus 328 T~~illEsA~F~p~~Ir~tar~l~l~TdaS~RfERgvd~~~~~~al~r~~~Li~e~~gg~~~---------~~~~~~~~~ 398 (805)
|++|++|+|+|||..++++ +.+++.++.++|++... .....+...
T Consensus 248 T~~i~iE~a~~d~~~~~~~--------------------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (589)
T 3l4g_B 248 TRNIFIECTGTDFTKAKIV--------------------------LDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPE 301 (589)
T ss_dssp CCCEEEEEEESCHHHHHHH--------------------------HHHHHHHHGGGBTTSSEEECEEEECTTSCEEEECC
T ss_pred CHHEEEHHCCCHHHHHHHH--------------------------HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCC
T ss_conf 3010112014207889998--------------------------87899999986353433110368862122245776
Q ss_pred CCCCCEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHC--CCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 543100004311333311345878999999984022210--345623664034543344025676767653523346676
Q gi|254780316|r 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG--EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 (805)
Q Consensus 399 ~~~~~I~l~~~~i~~ilG~~i~~~ei~~iL~~Lgf~v~~--~~~~~~V~vPs~R~DI~~e~DLiEEIaRiyGYdnIp~~~ 476 (805)
.++++|.++.++++++||++++.++|.++|++|||+++. +++.|.|+||+||+||.+++||||||+|+|||||||+.+
T Consensus 302 ~~~~~i~~~~~~i~~~lG~~i~~~~i~~iL~~Lgf~~~~~~~~~~~~v~vPs~R~DI~~~~DliEEIaRiyGydnI~~~~ 381 (589)
T 3l4g_B 302 LAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQMTL 381 (589)
T ss_dssp CCCEEEEEEHHHHHHHHTCCCCHHHHHHHHHHTTCEEEECSSSSEEEEEECSSCTTCCSHHHHHHHHHHHHCGGGSCCCC
T ss_pred CCCCEEECCHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
T ss_conf 66420324899952303872386788999987488058604687576248875564587541788888670030266667
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH----HHHHCCCCCCCCCCCCCCCCHHHCHH
Q ss_conf 55443457678998895467898878778774023210048257655200----00000024677643210151221106
Q gi|254780316|r 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG----GQRELEILNPISADMSNMRTSLLPGL 552 (805)
Q Consensus 477 l~~~~~~~~~~~~~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~~~~~----~~~~i~l~NPlS~e~s~lR~SLlp~L 552 (805)
+.. ......+..+++.+++|+.|+++||+|++||||+|++++..+.. ..+.++|.||+|+|+++||+||+|||
T Consensus 382 p~~---~~~~~~~~~~~~~~~ir~~L~~~Gf~E~itysf~s~~~~~~~~~~~~~~~~~v~l~NPis~e~s~lR~sLlp~L 458 (589)
T 3l4g_B 382 PKT---YTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGL 458 (589)
T ss_dssp CCC---CCCCCCCHHHHHHHHHHHHHHHTTCEECCCCSEECHHHHTGGGTSCTTSSCCCBBSSCSSGGGSEECSCSHHHH
T ss_pred CCC---CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCCCHHHH
T ss_conf 764---45565785799999999999971212202002569899987635566656428960875344444202576889
Q ss_pred HHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 77643210158611345430244447775443100022103543101246202345443333146888753111111101
Q gi|254780316|r 553 LKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 (805)
Q Consensus 553 L~~~~~N~~r~~~~i~lFEiG~Vf~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ll~~l 632 (805)
|+++++|++|+. ++++||+|+||.++...... ......++ + .|. ....|||++||.+++++..+
T Consensus 459 L~~~~~N~~~~~-~~~lFEiG~Vf~~~~~~~~~----~~~~~~l~----~-----~~~--~~~~~f~~~kg~~e~ll~~l 522 (589)
T 3l4g_B 459 LKTIAANRKMPL-PLKLFEISDIVIKDSNTDVG----AKNYRHLC----A-----VYY--NKNPGFEIIHGLLDRIMQLL 522 (589)
T ss_dssp HHHHHHTTTSCS-CEEEEEEEEEEEECTTSTTS----EEEEEEEE----E-----EEE--SSSCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCC-CEEEEEECCEECCCCCCCCC----CCCCCEEE----E-----EEC--CCCCCHHHHHHHHHHHHHHC
T ss_conf 999997316799-76799731447268864345----30114788----9-----970--89999999999999999872
Q ss_pred CCC-----CCEEEECCCCCCCCCCCEEEEEECCEEEEEEEEEECHHHHHHCCCCCCEEEEEEEHHHHH
Q ss_conf 453-----330330588656789816999987929999985477899996687997899998787623
Q gi|254780316|r 633 VSL-----DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 (805)
Q Consensus 633 ~~~-----~~~~~~~~~~~~~hPgrsa~I~~~gk~iiG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~ 695 (805)
+.. ..+.+++.++++|||||||.|+++|+.+ |++|+|||.++++|+|+.|||+|||||+.|.
T Consensus 523 ~i~~~~~~~~~~~~~~~~~~~hPgrsA~I~~~g~~i-G~iGelhP~v~~~~~l~~~v~~~Eidl~~Ll 589 (589)
T 3l4g_B 523 DVPPGEDKGGYVIKASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEINIGPFL 589 (589)
T ss_dssp TCCBSTTTTSEEEEECCCTTEEEEEEEEEEETTEEE-EEEEEECHHHHHHTTCCSCEEEEEEECGGGC
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEE-EEEEEECHHHHHHCCCCCCEEEEEEEHHHHC
T ss_conf 997445666379964878876898769999999499-9999998999997297997699999936829