HHsearch results for GI: 254780316 and protein with PDBid: 3l4g_B
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=97.24 E-value=0.00012 Score=50.70 Aligned_cols=213 Identities=10% Similarity=0.053 Sum_probs=123.5
Q ss_pred CEEEECCCCCCCEEEEEECC-CCCCHHHHHHHCCC--CCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCC
Q ss_conf 00000102233326886235-54311455420112--4543200002567631001113553120136726999971578
Q gi|254780316|r 263 PSHVFDASRISDVLTVRRAC-SGEKILALDNQEYD--LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 (805)
Q Consensus 263 PlHafD~dki~~~i~vr~a~-~~E~~~~Ld~~e~~--L~~~~lvI~d~~~~ialaGImGg~~s~v~~~T~~illEsA~F~ 339 (805)
-+..||++++..++.+...+ .+..|..|+..+.. ++.......+.+....++||||+..+.|..++++.+++.|
T Consensus 158 dItnyv~~~~gqPlhy~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~vi~d~~~~vl~la--- 234 (589)
T 3l4g_B 158 AIGTHDLDTLSGPFTYTAKRPSDIKFKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMP--- 234 (589)
T ss_dssp EEEEEEGGGCCSCEEEEEECSTTCEECBTTCSSCEEHHHHHHHSTTCTTTTTTTTTTCCSSCEEEEECTTCCCCEET---
T ss_pred EEHHEEHHHCCCCEEEEEECCCCEEEEECCCCCEEEECCCEEEEECCCCHHHHHCCCCCCCCEEEEECCCCEEEEEC---
T ss_conf 32114686538987999977997489987887247603440676046324431121103675048988896789856---
Q ss_pred HHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC-CCCC-CEECCCCHHHHHHCC
Q ss_conf 78887788761654015544134553013588999888752123345556525874135-5431-000043113333113
Q gi|254780316|r 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-YKPR-KIVFMNSEVKRLSGI 417 (805)
Q Consensus 340 p~~Ir~tar~l~l~TdaS~RfERgvd~~~~~~al~r~~~Li~e~~gg~~~~~~~~~~~~-~~~~-~I~l~~~~i~~ilG~ 417 (805)
..|....++....|.+.+++++|.||.. ..++...+.....--........... ..+. ........-. --+
T Consensus 235 -giigg~~s~v~~~T~~i~iE~a~~d~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i 307 (589)
T 3l4g_B 235 -PIINGDHSRITVNTRNIFIECTGTDFTK----AKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAY--RKE 307 (589)
T ss_dssp -TTEEBSTTCCCTTCCCEEEEEEESCHHH----HHHHHHHHHHHHGGGBTTSSEEECEEEECTTSCEEEECCCCC--EEE
T ss_pred -CCCCCCCEEECCCCHHEEEHHCCCHHHH----HHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCC--CEE
T ss_conf -4336766166565301011201420788----999887899999986353433110368862122245776664--203
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCC-CC-C-CCCCCCCCCCCCCCCHHHHH
Q ss_conf 458789999999840222103456236640345433440256767676535233-46-6-76554434576789988954
Q gi|254780316|r 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ-IK-S-EPLPLTQVEDKRNLSLQQSR 494 (805)
Q Consensus 418 ~i~~~ei~~iL~~Lgf~v~~~~~~~~V~vPs~R~DI~~e~DLiEEIaRiyGYdn-Ip-~-~~l~~~~~~~~~~~~~~~~~ 494 (805)
.++.+.+.++ ||.+ .+.+-|.++.+-.||.- .. . ..+....+..+.+.....
T Consensus 308 ~~~~~~i~~~---lG~~--------------------i~~~~i~~iL~~Lgf~~~~~~~~~~~~v~vPs~R~DI~~~~-- 362 (589)
T 3l4g_B 308 MVRADLINKK---VGIR--------------------ETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHAC-- 362 (589)
T ss_dssp EEEHHHHHHH---HTCC--------------------CCHHHHHHHHHHTTCEEEECSSSSEEEEEECSSCTTCCSHH--
T ss_pred ECCHHHHHHC---CCCC--------------------CCHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCC--
T ss_conf 2489995230---3872--------------------38678899998748805860468757624887556458754--
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 67898878778774023
Q gi|254780316|r 495 TRYVKRVLASRAMMEVV 511 (805)
Q Consensus 495 ~~~ir~~L~~~Gf~Ev~ 511 (805)
+-+-+.+...||..+-
T Consensus 363 -DliEEIaRiyGydnI~ 378 (589)
T 3l4g_B 363 -DIVEDAAIAYGYNNIQ 378 (589)
T ss_dssp -HHHHHHHHHHCGGGSC
T ss_pred -HHHHHHHHHHHHCCCC
T ss_conf -1788888670030266