HHsearch results for GI: 254780316 and protein with PDBid: 3od1_A
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=95.40 E-value=0.0069 Score=38.14 Aligned_cols=102 Identities=14% Similarity=0.115 Sum_probs=56.1
Q ss_pred HHHHCCCCCCEEEECCC--CCCCCCCCEEEEEECC--EEEEEEEEEECHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCC
Q ss_conf 11101453330330588--6567898169999879--2999998547789999668799789999878762354520245
Q gi|254780316|r 628 VIEPFVSLDSLRFESGA--PSWYHPGRSGIIKTSA--EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 (805)
Q Consensus 628 ll~~l~~~~~~~~~~~~--~~~~hPgrsa~I~~~g--k~iiG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~~~~~~~~~ 703 (805)
+++.++....+.+...- .--|+.|-..+++..+ ..+ +-=|.-+ .+.+.|+-..|.++|-+.++.|........
T Consensus 255 ~l~~~~~~~~i~~Dl~lvrgl~YYtG~vFe~~~~~~g~~I-~~GGRYD-~L~~~fg~~~pAvGfai~ld~l~~~l~~~~- 331 (400)
T 3od1_A 255 VLESYGASEYVKFDLTLVLHMSYYTGVVFEGYGNRLGVPL-CSGGRYD-ELLSKFHRPAQATGFGVRIDLLVEALNGEI- 331 (400)
T ss_dssp HHHHTTCGGGEEEETTCCSCSSSCCSEEEEEEETTCSSEE-EEEEECT-THHHHTTCCCCEEEEEEEHHHHHHHHCC---
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEE-EECCCHH-HHHHHCCCCCCEEEEEEEHHHHHHHHHHCC-
T ss_conf 9987498212233723367867256705999947978857-7353447-889961999877999988999999865125-
Q ss_pred CCCCCCCCCCCCCEEEEEEEECCCCC--HHHHHHHHHHCC
Q ss_conf 66313689888720018999668879--999999997111
Q gi|254780316|r 704 TKKVVHLSSLHPVKRDLAFIVDQHIP--AGTLVNIIKNVD 741 (805)
Q Consensus 704 ~~~~~~~s~fP~v~RDls~iv~~~v~--~~~I~~~i~~~~ 741 (805)
.+....++-+.++.+.. +-++.+.+|+.|
T Consensus 332 ---------~~~~~~~~~v~~~~~~~~~a~~~a~~LR~~G 362 (400)
T 3od1_A 332 ---------ISNGHEQTCILFSNERRFEAIELARKKRANG 362 (400)
T ss_dssp -------------CCCEEEEECGGGHHHHHHHHHHHHTTT
T ss_pred ---------CCCCCCEEEEEECCHHHHHHHHHHHHHHHCC
T ss_conf ---------7877885999989188999999999999889