HHsearch alignment for GI: 254780317 and conserved domain: COG0173

Probab=96.64  E-value=0.0035  Score=44.26  Aligned_cols=87  Identities=29%  Similarity=0.376  Sum_probs=53.4

Q ss_pred             CCCCCCEEEEEECCCCCCCCCCEEEEEEE----CCCCE--EEECCCCCEEEEECCCC--CC----HHHHHHCCCCCCC--
Q ss_conf             08886626454238898526610367875----05880--42246883489845756--38----8899856988000--
Q gi|254780317|r  249 FEVSSLQMRFRPSFFPFTEPSFEVDVRCS----FSDGI--IKFDEGTEWMEILGCGM--VD----PRVLRGVGIDPDI--  314 (366)
Q Consensus       249 fg~~~~~~r~rp~~fPftePs~Evdv~~~----~~~~~--~~~~~~~~WiEi~g~Gm--~~----p~vl~~~g~d~~~--  314 (366)
T Consensus       434 fE~~ee~~~~~a~HHPFT~P~~~~~~~l~~~p~~~~a~aYDlVlN--G-~ElggGSiRIh~~eiQ~~vF~~lg~~~eea~  510 (585)
T COG0173         434 FEWDEEEGRYVAAHHPFTMPKPEDLELLEADPESVRARAYDLVLN--G-YELGGGSIRIHDPEIQEKVFEILGISPEEAE  510 (585)
T ss_pred             CCCCCCCCCEECCCCCCCCCCCCCHHHHHCCHHHHHHHHCCEEEC--C-EEECCCEEEECCHHHHHHHHHHCCCCHHHHH
T ss_conf             677534586740448878998442445416977764532567760--2-7513543640788999999998199989999


Q ss_pred             ----------------EEEEEEECCHHHHHHHHCCCCCHHHH
Q ss_conf             ----------------37996313446997997389705876
Q gi|254780317|r  315 ----------------YQGFAWGMGLDRIAMLKYGMPDVREF  340 (366)
Q Consensus       315 ----------------~~g~AfG~G~eRlaml~~gi~diR~~  340 (366)
T Consensus       511 ekFGFll~Af~yGaPPHgGiA~--GlDRlvmll~g~~sIReV  550 (585)
T COG0173         511 EKFGFLLEAFKYGAPPHGGIAF--GLDRLVMLLTGAESIRDV  550 (585)
T ss_pred             HHHHHHHHHHHCCCCCCCCEEC--CHHHHHHHHCCCCCHHHE
T ss_conf             8877899997658999762424--599999998289744421