HHsearch alignment for GI: 254780317 and conserved domain: COG0173
>COG0173 AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=95.01 E-value=0.36 Score=29.59 Aligned_cols=133 Identities=16% Similarity=0.217 Sum_probs=84.6
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCC-----CCCCCCCC
Q ss_conf 6676543100000112321226742389999999999998739876237234158898886189887-----73316331
Q gi|254780317|r 91 FEQISSQSVDVSLPVFSSPCHRGRIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDD-----HPARQMHD 165 (366)
Q Consensus 91 ~~kl~~E~iDVTLP~~~~~~~~G~~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~-----HPARdmqD 165 (366)
T Consensus 122 e~RLkYRyLDLRR~~-----m~~~l~lR~kv~~~iR~~ld~~gF~EiETPiLtk--------STPEGARDfLVPSRv~~G 188 (585)
T COG0173 122 EIRLKYRYLDLRRPE-----MQKNLKLRSKVTKAIRNFLDDQGFLEIETPILTK--------STPEGARDFLVPSRVHPG 188 (585)
T ss_pred HHHHHHHHHHHCCHH-----HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC--------CCCCCCCCCCCCCCCCCC
T ss_conf 220244555636888-----9999999999999999977654985734674146--------798655443013455899
Q ss_pred EEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 27750566655632244676305555430363122541057647454-42137810020057861786689998899999
Q gi|254780317|r 166 TFFVPGIAGGKHKLLRTHTSPVQIRVMESQDLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDSATIANLRWVLESF 244 (366)
Q Consensus 166 TFyl~~~~~~~~~lLRthTS~vQiR~m~~~~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~ 244 (366)
T Consensus 189 ~FYAL------------PQSPQlfKQLLMvsGfdRYyQIarCFRDEDlRaDRQPEFTQiD~Em-SF-~~~edv~~~~E~l 254 (585)
T COG0173 189 KFYAL------------PQSPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQPEFTQIDLEM-SF-VDEEDVMELIEKL 254 (585)
T ss_pred CEEEC------------CCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEE-EC-CCHHHHHHHHHHH
T ss_conf 65306------------8887999999988053300235654046644444687533676776-43-8899999999999
Q ss_pred HHHHCC
Q ss_conf 999708
Q gi|254780317|r 245 CKSFFE 250 (366)
Q Consensus 245 ~~~~fg 250 (366)
T Consensus 255 ~~~vf~ 260 (585)
T COG0173 255 LRYVFK 260 (585)
T ss_pred HHHHHH
T ss_conf 999999