HHsearch alignment for GI: 254780317 and conserved domain: COG0423
>COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis].
Probab=95.94 E-value=0.02 Score=38.80 Aligned_cols=112 Identities=22% Similarity=0.284 Sum_probs=66.5
Q ss_pred CCCCCCCCCCCHHH----HHHH--HCCCEEEEEECCCCCCCC-C---CCCCCCCCCCCCEE-EECCCC------------
Q ss_conf 56322446763055----5543--036312254105764745-4---42137810020057-861786------------
Q gi|254780317|r 176 KHKLLRTHTSPVQI----RVME--SQDLPIKVIVPGKTYRRD-S---DSTHSPMFHQIEGL-VVSDSA------------ 232 (366)
Q Consensus 176 ~~~lLRthTS~vQi----R~m~--~~~pP~~~~~~GrvyR~d-~---D~tH~~~FhQ~egl-~v~~~i------------ 232 (366)
T Consensus 159 ~~~YLRPETAQGiFvnFk~l~~~~r~klPFgiaQIGKsfRNEISPr~gl~R~REF~QaEiE~Fv~P~~k~~p~f~~v~~~ 238 (558)
T COG0423 159 SLGYLRPETAQGIFVNFKNLLEFARNKLPFGIAQIGKSFRNEISPRNGLFRTREFEQAEIEFFVDPEEKEHPKFNEVKDE 238 (558)
T ss_pred CCEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCCCCEEEHHHHHHHEEEEEECCCCCCCCCHHHHHHH
T ss_conf 63245651002121536999997536898488862310146527665366512343120135887775568633333210
Q ss_pred ---------------------------CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCC----CEEEEEEECCCC
Q ss_conf ---------------------------6899988999999997088866264542388985266----103678750588
Q gi|254780317|r 233 ---------------------------TIANLRWVLESFCKSFFEVSSLQMRFRPSFFPFTEPS----FEVDVRCSFSDG 281 (366)
Q Consensus 233 ---------------------------~~~~lk~~l~~~~~~~fg~~~~~~r~rp~~fPftePs----~Evdv~~~~~~~ 281 (366)
T Consensus 239 ~l~l~~~~~q~~~~~~EAv~~g~~~n~~~~y~~~~~~~fl~~l-GI~~e~lRfrqh--~~~E~AHYa~~twD~E~~---- 311 (558)
T COG0423 239 KLPLLPREAQEEGTEEEAVEEGIVENETLAYFIARTKFFLEDL-GIDPEKLRFRQH--LPEELAHYSKDTWDAEYK---- 311 (558)
T ss_pred HCCCCCHHHHHHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHH-CCCHHHHHHHHC--CHHHHHHHHHCCEEEEEE----
T ss_conf 0246647776410034554415450443899999999999980-999898066523--908776654402327996----
Q ss_pred EEEECCCCCEEEEECCC
Q ss_conf 04224688348984575
Q gi|254780317|r 282 IIKFDEGTEWMEILGCG 298 (366)
Q Consensus 282 ~~~~~~~~~WiEi~g~G 298 (366)
T Consensus 312 ----~~~~gWiE~~GiA 324 (558)
T COG0423 312 ----FPFGGWIELVGIA 324 (558)
T ss_pred ----CCCCCEEEEEEEE
T ss_conf ----3788669999861