HHsearch alignment for GI: 254780317 and conserved domain: KOG1885
>KOG1885 consensus.
Probab=98.47 E-value=4.4e-07 Score=72.77 Aligned_cols=141 Identities=18% Similarity=0.238 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 89999999999998739876237234158898886189887733163312775056665563224467630555543036
Q gi|254780317|r 117 PVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIRVMESQD 196 (366)
Q Consensus 117 PItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR~m~~~~ 196 (366)
T Consensus 227 ~RakII~~iRkfld~rgFlEVETP----------mmn~i---aGGA~AkPFIT~hndldm~LylRiAPEL~-lK~LvVG- 291 (560)
T KOG1885 227 IRAKIISYIRKFLDSRGFLEVETP----------MMNMI---AGGATAKPFITHHNDLDMDLYLRIAPELY-LKMLVVG- 291 (560)
T ss_pred HHHHHHHHHHHHHHHCCCEEECCH----------HHCCC---CCCCCCCCEEECCCCCCCCEEEEECHHHH-HHHHHHC-
T ss_conf 999999999998654495684446----------55254---68632576043145567551456365999-9989860-
Q ss_pred CEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH----HCCCCCCEEEEEECCCCCCCCCCE
Q ss_conf 3122541057647454-42137810020057861786689998899999999----708886626454238898526610
Q gi|254780317|r 197 LPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKS----FFEVSSLQMRFRPSFFPFTEPSFE 271 (366)
Q Consensus 197 pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~----~fg~~~~~~r~rp~~fPftePs~E 271 (366)
T Consensus 292 GldrVYEIGr~FRNEGIDlTHNPEFTTcEfY~AYa--dy~dlm~~TE~l~s~mv~~i~G--~~~i~y~p~--~~~~~~~e 365 (560)
T KOG1885 292 GLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYA--DYEDLMDMTEELLSGMVKNITG--SYKITYHPN--GPEEPELE 365 (560)
T ss_pred CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCC--CEEEEECCC--CCCCCCEE
T ss_conf 17899998787630576654587742189999875--3888999999999999996037--436752688--98887436
Q ss_pred EEEEEEC
Q ss_conf 3678750
Q gi|254780317|r 272 VDVRCSF 278 (366)
Q Consensus 272 vdv~~~~ 278 (366)
T Consensus 366 ldf~~pf 372 (560)
T KOG1885 366 LDFTRPF 372 (560)
T ss_pred EECCCCE
T ss_conf 6236872