HHsearch alignment for GI: 254780317 and conserved domain: PRK04172
>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional.
Probab=100.00 E-value=0 Score=757.19 Aligned_cols=258 Identities=35% Similarity=0.691 Sum_probs=230.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCC
Q ss_conf 99999999998567666765431000001123212267423899999999999987398762372341588988861898
Q gi|254780317|r 76 GKISARKDFIRNQLIFEQISSQSVDVSLPVFSSPCHRGRIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFP 155 (366)
Q Consensus 76 ~~i~~kk~~L~~~~~~~kl~~E~iDVTLP~~~~~~~~G~~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP 155 (366)
T Consensus 207 ~~it~LT~EmL~SGsWK~~~FK~Yn~~a~--~~~~~~g~~Hp~~~~~~~~r~i~~~mGF~e~~g~~ve~~fwNfdaLf~P 284 (501)
T PRK04172 207 EEITQLTPELLKSGEWKEKEFRPYNIKAP--PPKIYPGKKHPYREFIEEVRDILVEMGFEEVKGPIVETEFWNFDALFQP 284 (501)
T ss_pred HHHHHCCHHHHCCCCCCCCCCCCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCEECCCCCHHHHCCC
T ss_conf 21300789885488523377660556788--8778988748899999999999997897685366101000033430589
Q ss_pred CCCCCCCCCCEEEEECCC----------------------------------CCCCCCCCCCCCCHHHHHHHH-CCCEEE
Q ss_conf 877331633127750566----------------------------------655632244676305555430-363122
Q gi|254780317|r 156 DDHPARQMHDTFFVPGIA----------------------------------GGKHKLLRTHTSPVQIRVMES-QDLPIK 200 (366)
Q Consensus 156 ~~HPARdmqDTFyl~~~~----------------------------------~~~~~lLRthTS~vQiR~m~~-~~pP~~ 200 (366)
T Consensus 285 q~HPARd~~Dtf~l~~~~~~~lp~~~~~~Vk~~HE~Gg~~gS~Gw~y~w~~~~~~~~~lRthtt~~~~r~l~~~~~~p~~ 364 (501)
T PRK04172 285 QDHPAREMQDTFYLKYPSKGELPEELVERVKEVHEHGGDTGSRGWGYKWDEDIAKRLVLRTHTTALSARYLAERPEPPGK 364 (501)
T ss_pred CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCEE
T ss_conf 89985554453786576545573788988999874277678877677778556643010436746679999746899835
Q ss_pred EEECCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECC
Q ss_conf 541057647454-4213781002005786178668999889999999970888662645423889852661036787505
Q gi|254780317|r 201 VIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSFFEVSSLQMRFRPSFFPFTEPSFEVDVRCSFS 279 (366)
Q Consensus 201 ~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~fg~~~~~~r~rp~~fPftePs~Evdv~~~~~ 279 (366)
T Consensus 365 ~f~~~rvfR~e~~d~tH~~~F~Q~eg~v~~~~~~~~~L~g~l~~f~~~~-g~~--~~rfrp~yfPftEPs~E~~~~~~-- 439 (501)
T PRK04172 365 YFSIGRVFRPETIDATHLPEFYQLEGIVMGEDVSFRHLLGILKEFYKRL-GFE--EVKFRPAYFPFTEPSVEVEVYHP-- 439 (501)
T ss_pred EECCCCEEECCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHH-CCC--CEEECCCCCCCCCCCEEEEEEEC--
T ss_conf 7356505426888865441332224899848887999999999999985-886--07867998998998278999957--
Q ss_pred CCEEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHCCHHHHHHC
Q ss_conf 880422468834898457563888998569880003799631344699799738970587663588888744
Q gi|254780317|r 280 DGIIKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRIAMLKYGMPDVREFFGADVRWIEHY 351 (366)
Q Consensus 280 ~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~d~~~~~g~AfG~G~eRlaml~~gi~diR~~~~~d~rfl~qf 351 (366)
T Consensus 440 --------~~~WiE~~g~G~~~pevl~~~g~~---~~~~a~G~g~eR~am~~~gi~diR~l~~~d~~~lr~~ 500 (501)
T PRK04172 440 --------GLGWVELGGAGIFRPEVTEPLGID---VPVLAWGIGIDRLAMLRLGLDDIRDLYSSDIEWLRET 500 (501)
T ss_pred --------CCCEEEEECCCCCCHHHHHHCCCC---CCEEEEEECHHHHHHHHHCCHHHHHHHHCCHHHHHCC
T ss_conf --------998699826757888999755999---8747875159999999829808888850547887129